View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13544_high_6 (Length: 255)
Name: NF13544_high_6
Description: NF13544
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13544_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 32733697 - 32733485
Alignment:
| Q |
1 |
tgcatacagaggaatgaattctttgttgaagcaaaatgcaactgcaacggcatcaccttcggtgtcgtcgcgatttctgtcctacatgttcaacaaattc |
100 |
Q |
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| T |
32733697 |
tgcatacagaggaatgaattctttcttgaagcaaaatgcaactgcaacggcaccaccttcggtgtcgtcgcgatttctgtcctacatgttcaacaaattc |
32733598 |
T |
|
| Q |
101 |
tttgaatactttagtcagattttgatggctttagtgttatgtctaatcacctttttcaaaaacctgattcttgcgttcttgggaaacctacttcaatggc |
200 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
32733597 |
tttgaatactttagtcagattatgatggctttagtgttatgtctaatcacctttttcaaaaacctgattcttgcgttcttgagaaacctacttcaatggc |
32733498 |
T |
|
| Q |
201 |
tgagaaacttatt |
213 |
Q |
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|||||||| |||| |
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| T |
32733497 |
tgagaaacctatt |
32733485 |
T |
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