View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13544_high_8 (Length: 208)

Name: NF13544_high_8
Description: NF13544
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13544_high_8
NF13544_high_8
[»] chr7 (57 HSPs)
chr7 (1-86)||(7517592-7517677)
chr7 (3-86)||(22566723-22566806)
chr7 (1-86)||(1085677-1085762)
chr7 (1-86)||(6054572-6054657)
chr7 (1-86)||(30244282-30244367)
chr7 (1-89)||(11845203-11845291)
chr7 (1-86)||(7554037-7554122)
chr7 (1-86)||(14681522-14681607)
chr7 (1-86)||(30245089-30245174)
chr7 (1-86)||(37533071-37533156)
chr7 (1-84)||(24177447-24177530)
chr7 (10-84)||(22567102-22567176)
chr7 (1-86)||(23438-23523)
chr7 (1-86)||(29157577-29157662)
chr7 (1-86)||(34218095-34218180)
chr7 (1-86)||(36939794-36939879)
chr7 (1-86)||(45434648-45434733)
chr7 (1-84)||(16569208-16569291)
chr7 (1-84)||(16596371-16596454)
chr7 (1-86)||(118362-118447)
chr7 (1-86)||(19122744-19122828)
chr7 (1-86)||(30032579-30032664)
chr7 (1-62)||(30245506-30245567)
chr7 (1-86)||(40094835-40094920)
chr7 (1-86)||(40230352-40230437)
chr7 (1-86)||(45754728-45754812)
chr7 (19-86)||(37533425-37533492)
chr7 (1-84)||(41910657-41910740)
chr7 (1-62)||(30255351-30255412)
chr7 (1-86)||(45433253-45433338)
chr7 (1-86)||(47129107-47129192)
chr7 (1-77)||(28301613-28301689)
chr7 (4-86)||(1085309-1085391)
chr7 (1-86)||(24838762-24838848)
chr7 (90-172)||(48243301-48243383)
chr7 (1-86)||(8128502-8128587)
chr7 (1-86)||(36534845-36534930)
chr7 (1-86)||(36622972-36623057)
chr7 (117-184)||(47129355-47129422)
chr7 (116-174)||(1085473-1085531)
chr7 (1-59)||(30244713-30244771)
chr7 (1-86)||(41854647-41854731)
chr7 (1-57)||(36109007-36109063)
chr7 (117-187)||(7553904-7553975)
chr7 (1-84)||(43241507-43241590)
chr7 (2-84)||(44361527-44361608)
chr7 (33-86)||(30253536-30253589)
chr7 (134-190)||(40094596-40094652)
chr7 (134-184)||(8128314-8128364)
chr7 (90-167)||(28300424-28300501)
chr7 (133-187)||(30245389-30245443)
chr7 (92-170)||(45434491-45434568)
chr7 (1-86)||(9901657-9901740)
chr7 (1-86)||(20599326-20599411)
chr7 (35-86)||(28300314-28300366)
chr7 (134-170)||(37345815-37345851)
chr7 (1-39)||(40094502-40094540)
[»] chr5 (56 HSPs)
chr5 (1-86)||(18603181-18603266)
chr5 (1-86)||(26075223-26075308)
chr5 (1-86)||(26074624-26074709)
chr5 (1-86)||(41170646-41170731)
chr5 (2-91)||(3295071-3295160)
chr5 (1-86)||(9498715-9498800)
chr5 (1-86)||(32487406-32487490)
chr5 (1-86)||(40296376-40296461)
chr5 (2-86)||(3295405-3295489)
chr5 (1-85)||(11417039-11417123)
chr5 (1-89)||(36492275-36492363)
chr5 (1-84)||(6224208-6224291)
chr5 (1-86)||(13415821-13415906)
chr5 (1-86)||(25327947-25328032)
chr5 (1-85)||(299501-299585)
chr5 (1-86)||(6500463-6500547)
chr5 (1-86)||(26074207-26074292)
chr5 (1-86)||(26074843-26074928)
chr5 (1-86)||(34753086-34753171)
chr5 (1-86)||(35150019-35150103)
chr5 (1-89)||(6500835-6500922)
chr5 (26-85)||(15370439-15370498)
chr5 (1-84)||(27502099-27502182)
chr5 (1-84)||(36568630-36568713)
chr5 (1-86)||(15370111-15370196)
chr5 (1-86)||(41632794-41632879)
chr5 (1-89)||(29549313-29549401)
chr5 (1-89)||(33747783-33747871)
chr5 (1-86)||(624208-624293)
chr5 (13-78)||(41635260-41635325)
chr5 (1-86)||(42405657-42405742)
chr5 (1-69)||(26074330-26074398)
chr5 (1-84)||(1028580-1028663)
chr5 (1-84)||(42508624-42508707)
chr5 (1-55)||(300971-301025)
chr5 (1-59)||(39309696-39309754)
chr5 (1-86)||(12662713-12662798)
chr5 (1-85)||(24489268-24489350)
chr5 (11-64)||(35167921-35167974)
chr5 (117-184)||(13415971-13416038)
chr5 (90-174)||(624052-624136)
chr5 (1-74)||(35914861-35914934)
chr5 (1-86)||(36521957-36522042)
chr5 (127-187)||(3295224-3295284)
chr5 (1-49)||(6225056-6225104)
chr5 (1-85)||(38427560-38427643)
chr5 (1-64)||(7768862-7768925)
chr5 (26-85)||(26590972-26591031)
chr5 (1-62)||(5723876-5723937)
chr5 (134-187)||(25328210-25328263)
chr5 (90-170)||(35150582-35150662)
chr5 (133-174)||(38427454-38427495)
chr5 (1-85)||(2411019-2411103)
chr5 (134-184)||(13785818-13785868)
chr5 (56-89)||(13042606-13042639)
chr5 (1-85)||(623830-623914)
[»] chr1 (59 HSPs)
chr1 (1-85)||(41157387-41157471)
chr1 (1-86)||(17294589-17294674)
chr1 (1-86)||(44290886-44290971)
chr1 (1-86)||(3550732-3550817)
chr1 (1-86)||(44290519-44290604)
chr1 (1-84)||(41142384-41142467)
chr1 (1-86)||(26661583-26661668)
chr1 (1-86)||(32594777-32594862)
chr1 (1-83)||(41184489-41184571)
chr1 (1-86)||(3537660-3537745)
chr1 (1-86)||(26661959-26662044)
chr1 (1-86)||(34364937-34365022)
chr1 (1-86)||(41157003-41157088)
chr1 (1-89)||(29798211-29798299)
chr1 (1-84)||(3875394-3875477)
chr1 (1-86)||(11977292-11977377)
chr1 (1-86)||(31767222-31767307)
chr1 (1-86)||(34364519-34364604)
chr1 (1-86)||(41759495-41759580)
chr1 (1-89)||(5575116-5575204)
chr1 (90-174)||(37555963-37556047)
chr1 (1-64)||(3537230-3537293)
chr1 (1-86)||(9955919-9956006)
chr1 (1-86)||(5320026-5320111)
chr1 (1-86)||(14318879-14318964)
chr1 (1-86)||(22077556-22077641)
chr1 (1-86)||(34649450-34649535)
chr1 (1-86)||(38804416-38804501)
chr1 (1-86)||(50052084-50052169)
chr1 (1-65)||(45084394-45084458)
chr1 (1-86)||(37556123-37556208)
chr1 (4-86)||(48588549-48588631)
chr1 (1-86)||(5528815-5528900)
chr1 (117-174)||(34649700-34649757)
chr1 (1-86)||(40082419-40082503)
chr1 (26-86)||(44043833-44043893)
chr1 (26-89)||(22077168-22077231)
chr1 (1-89)||(45494032-45494124)
chr1 (5-86)||(66148-66230)
chr1 (1-83)||(24132049-24132131)
chr1 (1-86)||(66533-66618)
chr1 (1-89)||(37850658-37850746)
chr1 (1-89)||(39066258-39066346)
chr1 (1-54)||(4266875-4266928)
chr1 (1-70)||(21378118-21378187)
chr1 (1-86)||(30630699-30630784)
chr1 (1-85)||(24600376-24600460)
chr1 (1-83)||(44685468-44685551)
chr1 (38-83)||(41184152-41184197)
chr1 (134-187)||(47379990-47380043)
chr1 (134-174)||(22077340-22077380)
chr1 (1-36)||(35154150-35154185)
chr1 (121-187)||(41184231-41184298)
chr1 (134-184)||(22077703-22077753)
chr1 (133-187)||(34364820-34364874)
chr1 (1-59)||(37555742-37555800)
chr1 (1-85)||(22793290-22793375)
chr1 (18-86)||(32168759-32168821)
chr1 (28-64)||(22077911-22077947)
[»] chr6 (45 HSPs)
chr6 (1-80)||(16108075-16108154)
chr6 (1-86)||(2377766-2377851)
chr6 (1-86)||(3409271-3409356)
chr6 (1-89)||(16454587-16454675)
chr6 (1-86)||(16454919-16455004)
chr6 (1-86)||(29518515-29518600)
chr6 (1-86)||(29518932-29519017)
chr6 (1-86)||(32741191-32741276)
chr6 (1-84)||(2378138-2378221)
chr6 (1-84)||(3415470-3415553)
chr6 (1-86)||(2579933-2580018)
chr6 (1-86)||(3058238-3058323)
chr6 (1-86)||(10074052-10074137)
chr6 (1-86)||(32460641-32460726)
chr6 (1-86)||(35210216-35210301)
chr6 (4-86)||(593770-593852)
chr6 (4-89)||(1846763-1846848)
chr6 (1-86)||(2578504-2578588)
chr6 (1-86)||(14748399-14748484)
chr6 (1-85)||(26544061-26544145)
chr6 (1-76)||(3409672-3409747)
chr6 (7-86)||(10074424-10074503)
chr6 (1-86)||(1127372-1127457)
chr6 (1-86)||(16107690-16107775)
chr6 (1-85)||(1950247-1950331)
chr6 (1-89)||(6999854-6999942)
chr6 (1-64)||(5832109-5832172)
chr6 (1-85)||(10911577-10911662)
chr6 (1-86)||(2843566-2843652)
chr6 (1-79)||(9062417-9062495)
chr6 (1-86)||(2578896-2578980)
chr6 (1-86)||(2579553-2579638)
chr6 (116-174)||(2578673-2578731)
chr6 (90-184)||(2579320-2579414)
chr6 (1-86)||(10073677-10073760)
chr6 (4-85)||(2975567-2975648)
chr6 (1-49)||(2579203-2579251)
chr6 (105-184)||(16107931-16108010)
chr6 (134-174)||(33605875-33605915)
chr6 (12-86)||(5958664-5958738)
chr6 (9-62)||(35210498-35210551)
chr6 (5-85)||(12092544-12092624)
chr6 (117-187)||(29518801-29518872)
chr6 (26-64)||(14789287-14789325)
chr6 (33-89)||(6071176-6071232)
[»] scaffold0702 (2 HSPs)
scaffold0702 (1-86)||(575-660)
scaffold0702 (1-59)||(230-288)
[»] chr2 (60 HSPs)
chr2 (1-86)||(15880275-15880360)
chr2 (1-86)||(36178666-36178751)
chr2 (1-86)||(14745728-14745813)
chr2 (1-86)||(37106200-37106285)
chr2 (1-86)||(6421397-6421482)
chr2 (1-84)||(6712988-6713071)
chr2 (1-64)||(40733529-40733592)
chr2 (1-84)||(41283538-41283621)
chr2 (1-86)||(962610-962695)
chr2 (1-86)||(5543059-5543144)
chr2 (1-66)||(7598621-7598686)
chr2 (1-86)||(28254298-28254383)
chr2 (1-86)||(35580785-35580869)
chr2 (1-86)||(38796681-38796766)
chr2 (1-86)||(42514661-42514746)
chr2 (1-77)||(31899496-31899572)
chr2 (1-84)||(5542688-5542771)
chr2 (5-84)||(6422126-6422205)
chr2 (1-86)||(15511556-15511641)
chr2 (1-86)||(33731660-33731745)
chr2 (1-86)||(36005941-36006025)
chr2 (1-86)||(37105936-37106021)
chr2 (7-86)||(36178232-36178311)
chr2 (1-64)||(38796301-38796364)
chr2 (1-86)||(14745355-14745440)
chr2 (1-86)||(28531375-28531460)
chr2 (1-86)||(36178330-36178415)
chr2 (1-89)||(29874081-29874169)
chr2 (1-64)||(1769904-1769967)
chr2 (1-86)||(40679690-40679775)
chr2 (1-89)||(12529086-12529174)
chr2 (1-85)||(16542461-16542545)
chr2 (1-86)||(31259677-31259765)
chr2 (1-86)||(37895122-37895207)
chr2 (1-62)||(40163458-40163519)
chr2 (2-86)||(5367468-5367552)
chr2 (1-80)||(29676915-29676999)
chr2 (1-86)||(31468811-31468892)
chr2 (134-185)||(42514912-42514963)
chr2 (1-86)||(7598240-7598325)
chr2 (33-86)||(31385781-31385834)
chr2 (1-86)||(33561512-33561597)
chr2 (1-86)||(37632658-37632743)
chr2 (1-66)||(40733895-40733960)
chr2 (128-172)||(38796443-38796487)
chr2 (1-76)||(29676547-29676622)
chr2 (2-84)||(23346250-23346331)
chr2 (5-83)||(28254176-28254254)
chr2 (133-187)||(36785771-36785825)
chr2 (1-84)||(16590900-16590978)
chr2 (1-86)||(30323476-30323561)
chr2 (1-46)||(36785664-36785709)
chr2 (117-161)||(23346497-23346541)
chr2 (5-85)||(29873599-29873679)
chr2 (42-89)||(36784318-36784365)
chr2 (117-166)||(3672963-3673012)
chr2 (1-86)||(30313190-30313274)
chr2 (1-78)||(33953840-33953917)
chr2 (1-86)||(37894753-37894838)
chr2 (1-37)||(6421316-6421352)
[»] chr3 (67 HSPs)
chr3 (1-89)||(15772866-15772954)
chr3 (1-86)||(29644963-29645048)
chr3 (1-86)||(35946534-35946619)
chr3 (1-86)||(43346852-43346937)
chr3 (2-86)||(32589716-32589800)
chr3 (1-86)||(29644642-29644727)
chr3 (1-86)||(37990700-37990785)
chr3 (1-86)||(42342449-42342534)
chr3 (2-86)||(22304582-22304666)
chr3 (1-85)||(39935017-39935101)
chr3 (1-86)||(12114623-12114708)
chr3 (1-86)||(33803313-33803398)
chr3 (1-86)||(52634688-52634772)
chr3 (1-85)||(3135135-3135219)
chr3 (8-86)||(41359826-41359904)
chr3 (1-86)||(15773204-15773289)
chr3 (1-86)||(39389082-39389167)
chr3 (1-86)||(54017877-54017962)
chr3 (117-184)||(8328155-8328222)
chr3 (3-86)||(42342151-42342234)
chr3 (1-86)||(21832404-21832489)
chr3 (1-86)||(25739486-25739571)
chr3 (1-85)||(32462962-32463047)
chr3 (1-86)||(37991038-37991123)
chr3 (1-86)||(54018259-54018344)
chr3 (3-63)||(31190031-31190091)
chr3 (1-89)||(39914264-39914352)
chr3 (1-85)||(42584884-42584968)
chr3 (1-64)||(25755406-25755469)
chr3 (1-89)||(22304013-22304094)
chr3 (1-86)||(4823667-4823752)
chr3 (1-86)||(8327916-8328001)
chr3 (1-89)||(32462616-32462705)
chr3 (1-86)||(45395714-45395799)
chr3 (1-89)||(3135512-3135607)
chr3 (1-64)||(33175747-33175810)
chr3 (1-64)||(50612535-50612598)
chr3 (1-86)||(1634375-1634461)
chr3 (1-62)||(37726516-37726577)
chr3 (1-86)||(53118036-53118120)
chr3 (1-81)||(7767380-7767460)
chr3 (1-89)||(9240161-9240249)
chr3 (18-86)||(33362354-33362422)
chr3 (18-86)||(44160605-44160673)
chr3 (1-84)||(45901725-45901809)
chr3 (9-84)||(11661971-11662046)
chr3 (5-70)||(49336764-49336829)
chr3 (1-73)||(51886573-51886645)
chr3 (133-184)||(8328276-8328327)
chr3 (47-86)||(22303720-22303759)
chr3 (1-86)||(3384327-3384412)
chr3 (90-167)||(33803099-33803174)
chr3 (1-86)||(53577376-53577461)
chr3 (134-174)||(21832561-21832601)
chr3 (33-89)||(39336287-39336343)
chr3 (33-85)||(46546387-46546439)
chr3 (1-56)||(11661547-11661602)
chr3 (1-44)||(22304258-22304301)
chr3 (3-86)||(25991417-25991500)
chr3 (142-173)||(42342296-42342327)
chr3 (39-86)||(52634990-52635037)
chr3 (120-170)||(3135298-3135348)
chr3 (90-160)||(41359617-41359687)
chr3 (44-86)||(47964579-47964621)
chr3 (4-45)||(43346665-43346706)
chr3 (33-89)||(12749213-12749269)
chr3 (128-187)||(54018024-54018084)
[»] chr8 (68 HSPs)
chr8 (1-84)||(70337-70420)
chr8 (1-86)||(3669699-3669784)
chr8 (1-86)||(25561877-25561962)
chr8 (1-86)||(30359283-30359368)
chr8 (1-81)||(9309367-9309447)
chr8 (1-86)||(147463-147548)
chr8 (1-86)||(3038351-3038436)
chr8 (1-86)||(34835221-34835306)
chr8 (2-89)||(20870631-20870718)
chr8 (1-86)||(1513976-1514061)
chr8 (1-86)||(30359621-30359706)
chr8 (1-86)||(40518594-40518679)
chr8 (1-86)||(9308989-9309076)
chr8 (1-85)||(9482666-9482750)
chr8 (18-86)||(9483248-9483316)
chr8 (1-84)||(5420663-5420746)
chr8 (1-86)||(3670072-3670157)
chr8 (5-86)||(8918825-8918906)
chr8 (3-91)||(45122638-45122726)
chr8 (105-176)||(9482862-9482933)
chr8 (90-176)||(9483025-9483111)
chr8 (1-91)||(9608757-9608847)
chr8 (2-79)||(3037776-3037853)
chr8 (1-86)||(18372055-18372140)
chr8 (1-62)||(25561729-25561790)
chr8 (1-86)||(33113428-33113513)
chr8 (1-86)||(34834888-34834973)
chr8 (1-86)||(45121971-45122056)
chr8 (1-86)||(45122118-45122203)
chr8 (1-77)||(1013941-1014017)
chr8 (1-86)||(30441093-30441182)
chr8 (1-85)||(41972170-41972254)
chr8 (1-85)||(43274841-43274925)
chr8 (1-64)||(41416254-41416317)
chr8 (6-85)||(45121718-45121797)
chr8 (1-86)||(34835486-34835572)
chr8 (1-86)||(34835752-34835838)
chr8 (1-86)||(1014306-1014391)
chr8 (1-86)||(8794123-8794208)
chr8 (1-61)||(18372785-18372845)
chr8 (18-89)||(32305506-32305577)
chr8 (18-84)||(40579569-40579635)
chr8 (1-74)||(18373004-18373077)
chr8 (1-86)||(37544551-37544636)
chr8 (21-86)||(40518103-40518168)
chr8 (26-86)||(9507819-9507879)
chr8 (12-84)||(9609108-9609180)
chr8 (1-61)||(18372342-18372402)
chr8 (1-85)||(18380079-18380163)
chr8 (127-187)||(40518474-40518534)
chr8 (121-187)||(3038135-3038202)
chr8 (7-86)||(6876923-6877002)
chr8 (138-184)||(9482810-9482856)
chr8 (2-84)||(20130462-20130543)
chr8 (1-86)||(45123018-45123101)
chr8 (93-174)||(8918985-8919065)
chr8 (1-86)||(32640593-32640673)
chr8 (1-84)||(9620739-9620822)
chr8 (134-184)||(45122902-45122952)
chr8 (1-86)||(4154727-4154812)
chr8 (1-74)||(18372676-18372748)
chr8 (1-89)||(12283885-12283972)
chr8 (1-40)||(147841-147880)
chr8 (26-81)||(18373236-18373291)
chr8 (117-163)||(147713-147759)
chr8 (33-86)||(40991797-40991850)
chr8 (1-89)||(43398126-43398217)
chr8 (50-86)||(5915928-5915964)
[»] chr4 (76 HSPs)
chr4 (1-86)||(2741083-2741168)
chr4 (1-86)||(36572031-36572116)
chr4 (1-86)||(39404410-39404495)
chr4 (1-86)||(52884899-52884984)
chr4 (1-89)||(22183320-22183408)
chr4 (1-84)||(54017656-54017739)
chr4 (8-86)||(54936215-54936293)
chr4 (1-86)||(1731706-1731791)
chr4 (1-86)||(3340819-3340904)
chr4 (1-86)||(34646708-34646793)
chr4 (1-86)||(41370369-41370454)
chr4 (1-86)||(50630814-50630899)
chr4 (4-79)||(54108928-54109003)
chr4 (1-86)||(25483348-25483433)
chr4 (1-86)||(36629249-36629334)
chr4 (1-86)||(39792919-39793004)
chr4 (1-86)||(49880172-49880257)
chr4 (1-86)||(52884707-52884792)
chr4 (1-86)||(55933183-55933268)
chr4 (1-86)||(49302916-49303003)
chr4 (2-84)||(54017763-54017845)
chr4 (1-86)||(4955376-4955461)
chr4 (1-86)||(10245932-10246016)
chr4 (1-86)||(22028020-22028105)
chr4 (1-86)||(36608720-36608805)
chr4 (1-86)||(41707523-41707608)
chr4 (1-86)||(44620365-44620450)
chr4 (1-86)||(50002438-50002523)
chr4 (1-84)||(2740712-2740795)
chr4 (8-86)||(4390160-4390238)
chr4 (90-184)||(43174378-43174472)
chr4 (4-86)||(45496820-45496902)
chr4 (7-84)||(18932810-18932887)
chr4 (1-86)||(20825848-20825933)
chr4 (1-78)||(20826229-20826306)
chr4 (1-89)||(54741234-54741322)
chr4 (117-184)||(20826099-20826166)
chr4 (1-84)||(50459733-50459816)
chr4 (1-60)||(54343086-54343145)
chr4 (4-86)||(44621017-44621099)
chr4 (1-83)||(49076510-49076592)
chr4 (1-86)||(3244510-3244595)
chr4 (1-86)||(3341140-3341225)
chr4 (1-58)||(3700377-3700434)
chr4 (1-78)||(10246359-10246436)
chr4 (1-86)||(51768119-51768204)
chr4 (1-86)||(16888875-16888960)
chr4 (1-86)||(39404030-39404115)
chr4 (1-86)||(44620672-44620756)
chr4 (1-64)||(43174518-43174582)
chr4 (4-86)||(54108551-54108634)
chr4 (133-184)||(54108813-54108864)
chr4 (40-86)||(31691203-31691249)
chr4 (1-55)||(44620308-44620362)
chr4 (1-55)||(45489421-45489475)
chr4 (1-86)||(6975515-6975600)
chr4 (121-174)||(22028205-22028258)
chr4 (1-86)||(32941182-32941267)
chr4 (11-86)||(3271806-3271884)
chr4 (1-86)||(22028428-22028515)
chr4 (1-89)||(34004641-34004727)
chr4 (117-190)||(39404283-39404352)
chr4 (121-184)||(45489542-45489605)
chr4 (18-84)||(48111759-48111825)
chr4 (20-86)||(49076890-49076955)
chr4 (1-86)||(16889595-16889680)
chr4 (122-184)||(2740956-2741019)
chr4 (35-86)||(18879852-18879903)
chr4 (122-173)||(49076671-49076722)
chr4 (1-55)||(44621438-44621492)
chr4 (1-86)||(760201-760286)
chr4 (133-170)||(31691430-31691467)
chr4 (34-83)||(43827485-43827534)
chr4 (121-170)||(44621309-44621358)
chr4 (128-187)||(16889360-16889420)
chr4 (1-41)||(50788087-50788127)
[»] scaffold0078 (2 HSPs)
scaffold0078 (1-89)||(5369-5457)
scaffold0078 (1-86)||(4994-5079)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-84)||(17519-17602)
[»] scaffold0734 (2 HSPs)
scaffold0734 (1-79)||(5789-5867)
scaffold0734 (1-64)||(5408-5471)
[»] scaffold0391 (5 HSPs)
scaffold0391 (1-86)||(1167-1252)
scaffold0391 (121-174)||(1328-1381)
scaffold0391 (36-84)||(1754-1802)
scaffold0391 (1-40)||(3092-3131)
scaffold0391 (121-170)||(1524-1575)
[»] scaffold0027 (1 HSPs)
scaffold0027 (5-86)||(47376-47457)
[»] scaffold0504 (1 HSPs)
scaffold0504 (1-64)||(10194-10257)


Alignment Details
Target: chr7 (Bit Score: 74; Significance: 4e-34; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 7517592 - 7517677
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7517592 ttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgg 7517677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 22566806 - 22566723
Alignment:
Q  3 atatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22566806 atatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgg 22566723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1085762 - 1085677
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  1085762 ttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttttgg 1085677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 6054572 - 6054657
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  6054572 ttatatgtctcacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaacacattgccttaaggttttgg 6054657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30244282 - 30244367
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||| ||||| |||||||||||||||||||||    
T  30244282 ttatatgtcccacatcggataaaagagtaaaggttgaagaccttataagtaagaggactcataaacccattgccttaaggttttgg 30244367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 11845203 - 11845291
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    |||||||| ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  11845203 ttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttggata 11845291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 7554037 - 7554122
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||| |||||| ||||| |||||||||||||||    
T  7554037 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccatagccttaaggttttgg 7554122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 14681522 - 14681607
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||||||||||| |||||| |||||||||||| ||||||||||| ||||||| ||||||| |||||||||||||    
T  14681522 ttatatgtcccacatcagataaaatagtaaaggttgaacaccttgtaagtaagagggcccataaacccattgtcttaaggttttgg 14681607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30245089 - 30245174
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||| ||||||| |||||||||||||| |||||||||||||||||||||| ||||||||| | |||||||||||||||||||    
T  30245089 ttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagacgacccataaactcattgccttaaggttttgg 30245174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37533156 - 37533071
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||  ||||||| |||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  37533156 ttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgg 37533071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 24177447 - 24177530
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||||||||||| |||||||||||||| | ||||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  24177447 ttatatgtcccacatcggataaaagagtaaaggctgaacaccttataagtaagcggacccataaacccattgccttaaagtttt 24177530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 22567176 - 22567102
Alignment:
Q  10 ccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  22567176 ccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggtttt 22567102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 23523 - 23438
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||| ||||||| |||| || |||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  23523 ttatatgttccacatcggatacaatagtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaaggttttgg 23438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29157577 - 29157662
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||| | ||||||| |||||| |||||||||||||||||||||| |||||||||  ||||||||||||||||||||    
T  29157577 ttatatgtcccacaccggataaaatagtaaaggttgaacaccttataagtaagacgacccataaatccattgccttaaggttttgg 29157662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 34218180 - 34218095
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||||||||| ||||||| ||||| ||||||| |||||||||||||    
T  34218180 ttatatgtctcacatcggataaaaaagtaaatgttgaacaccttataagtgagaggactcataaacccattgtcttaaggttttgg 34218095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 36939879 - 36939794
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||| |||  |||||| |||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  36939879 ttatatgtcccaaatcgtataaaatagtaaaagttgaacaccttataagtaagaggacccataaatccattgccttaaggttttgg 36939794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 45434648 - 45434733
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| |  | ||||||||||||||||    
T  45434648 ttatatgtcccacatcggataaaaaagtaaaggttgaacaccttataagtaagaggacccataaacttactgccttaaggttttgg 45434733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 16569208 - 16569291
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    ||||||||| |||||| |||| || |||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  16569208 ttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggtttt 16569291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 16596454 - 16596371
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    ||||||||| |||||| |||| || |||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  16596454 ttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggtttt 16596371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 118447 - 118362
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||| |||||| |||||| || |||||||||||    
T  118447 ttatatgtcccacatcagatagaaaagtaaaggttgaacacctaataagtaagaggatccataaacccattaccgtaaggttttgg 118362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 19122744 - 19122828
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||| ||||||| |||||| |||||||||||||||||||||||||| |||||  ||||||||||||||||||||    
T  19122744 ttatatgtcc-acatcggataaaatagtaaaggttgaacaccttataagtaagaggactcataaatccattgccttaaggttttgg 19122828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30032579 - 30032664
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||  |||||||||||| |||||||||||||||||||||||| | |||||| || || |||||||||||||||    
T  30032579 ttatatgtcccacatcgaataaaagagtaagtgttgaacaccttataagtaagagtatccataaacctatagccttaaggttttgg 30032664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30245506 - 30245567
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccat 62  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  30245506 ttatatgtcccacatcagataaaagagtaaaggttgaacaccttataagtaagagggcccat 30245567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 40094920 - 40094835
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| ||||||  ||||||||||||| ||| |||||||||||||||||||||||||||| ||||| | |||||||||||||    
T  40094920 ttatatgtctcacatcgaataaaagagtaaaggttcaacaccttataagtaagaggacccataaacccatcgtcttaaggttttgg 40094835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 40230437 - 40230352
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||  |||||| |||||| |||||||| ||||||||||||||||||||||| ||||| | |||||||||||||    
T  40230437 ttatatgtcccacatcgaataaaaaagtaaaagttgaacatcttataagtaagaggacccataaacccatagtcttaaggttttgg 40230352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 45754728 - 45754812
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||    
T  45754728 ttatatgtcc-acatcggataaaatagtaaatgttgaacaccttataagtaagatgactcataaacccatagccttaaggttttgg 45754812  T

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Target: chr7; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 37533492 - 37533425
Alignment:
Q  19 ataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  37533492 ataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttgg 37533425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 41910740 - 41910657
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||||||||||| |||||||||||||| |||||| ||||||||| | ||||||||||||| ||||||| |||||| ||||    
T  41910740 ttatatgtcccacatcggataaaagagtaaaggttgaataccttataactgagaggacccataaacccattggcttaagatttt 41910657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30255351 - 30255412
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccat 62  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||    
T  30255351 ttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagagggcccat 30255412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 45433253 - 45433338
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||  ||||||| |||||||||||||| ||||||||||||||||||||||| || ||||| || ||||||||||| ||||||    
T  45433253 ttatatgatccacatcggataaaagagtaaaggttgaacaccttataagtaagagaactcataaacctattgccttaagattttgg 45433338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 47129107 - 47129192
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| ||||||| |||||| |||||||  ||||||||||||||||||||||| ||||| || ||||||||||||    
T  47129107 ttatatgtctcacatcggataaaatagtaaaggttgaacctcttataagtaagaggacccataaacccatcgctttaaggttttgg 47129192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 28301689 - 28301613
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgcctta 77  Q
    ||||||||| |||||| |||| || |||||| | |||||||||||||||||||||||||||||| ||||||||||||    
T  28301689 ttatatgtctcacatcggatagaaaagtaaaagctgaacaccttataagtaagaggacccataaacccattgcctta 28301613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 1085391 - 1085309
Alignment:
Q  4 tatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| ||| ||||||| |||||| |||||||| || ||||||||||| |||||||| | |||||||||||||||||||    
T  1085391 tatgtcccatatcggataaaatagtaaaagttgaacaactcataagtaagagaacccataaactcattgccttaaggttttgg 1085309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 24838848 - 24838762
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaag-aggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||| |||| |||||| ||| ||| |||||||||||||    
T  24838848 ttatatgtctcacatcgaataaaagagtaaaggttgaacaccttataagtaagaaggatccataaacccgttgtcttaaggttttgg 24838762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 48243383 - 48243301
Alignment:
Q  90 tgcgcataaagaagtaacgacggtaaaaagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaaga 172  Q
    |||||| |||| || |||| ||||| |||||||||| ||| | || |||||||||||||||||||||||||||||||||||||    
T  48243383 tgcgcagaaagcagcaacggcggtacaaagcagtgtcggttcgttggcggagaaaccagcaacggcgatacaagcaagtaaga 48243301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 8128587 - 8128502
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||| ||| |||| || | |||| ||||||||||||||| |||||||||||||||| |||||  ||||||||||||||    
T  8128587 ttatatgtcccatatcggatagaaaaataaaggttgaacaccttatatgtaagaggacccataaacccataaccttaaggttttgg 8128502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 36534930 - 36534845
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||| || ||||||| |||| | |||||||||||||||||||||||||||||||| || |  | |||||||||||||    
T  36534930 ttatatgtcccacctcggataaaacagtagaggttgaacaccttataagtaagaggacccataaacctaaagtcttaaggttttgg 36534845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 36622972 - 36623057
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| ||| ||||  ||||||||| ||||| ||||||  ||||||||||||||||||||    
T  36622972 ttatatgtcccacatcggataaaatagtaaaggttaaacattttataagtaggaggatccataaatccattgccttaaggttttgg 36623057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 47129355 - 47129422
Alignment:
Q  117 aagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttga 184  Q
    ||||||||| ||||| ||||||||||||||||||||| | ||||||||||||||||||  ||||||||    
T  47129355 aagcagtgtcggtccgtttgcggagaaaccagcaacgacaatacaagcaagtaagagcttccgcttga 47129422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 1085531 - 1085473
Alignment:
Q  116 aaagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagc 174  Q
    |||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  1085531 aaagtagtgtcggtccgtttgcggagaaaccagcaacagcgatacaagcaagtaagagc 1085473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 30244713 - 30244771
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacc 59  Q
    |||||||||||||||  |||||||||||||| |||||||||||||||| ||||||||||    
T  30244713 ttatatgtcccacattggataaaagagtaaaggttgaacaccttataaataagaggacc 30244771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41854647 - 41854731
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||| |||| |||| ||||    | ||||||||||||||||    
T  41854647 ttatatgtcccacatcag-taaaagagtaaaggttgaacaccttataagcaagatgacctataaatataatgccttaaggttttgg 41854731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36109063 - 36109007
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagagga 57  Q
    |||||| || |||||| |||||||||||||| |||||||||||||||||||||||||    
T  36109063 ttatatttctcacatcggataaaagagtaaaggttgaacaccttataagtaagagga 36109007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 7553904 - 7553975
Alignment:
Q  117 aagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagc-aagtaagagcccccgcttgaggg 187  Q
    ||||||||||||||| ||||| ||||||||||||||||||| ||| || ||||||||||  |||||||||||    
T  7553904 aagcagtgttggtccgtttgcagagaaaccagcaacggcgacacatgcaaagtaagagcttccgcttgaggg 7553975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 43241507 - 43241590
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||| ||||||| ||||||| | |||| |||||||||||||||||||| ||||| ||||| |  |||| |||||||||||    
T  43241507 ttatatgttccacatcggataaaaaaataaaggttgaacaccttataagtaaaaggactcataaacttattgacttaaggtttt 43241590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 44361608 - 44361527
Alignment:
Q  2 tatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||| |||||| |||||||||||||| |||||||||||| ||||||||| || |||||| |||||  ||||| ||||||    
T  44361608 tatatgtctcacatcggataaaagagtaaaagttgaacacctt-taagtaagatgatccataaacccataaccttacggtttt 44361527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 30253536 - 30253589
Alignment:
Q  33 gttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||| |||||||||||||||| |||||||| | |||||||||||||||||||    
T  30253536 gttgaagaccttataagtaagagaacccataaactcattgccttaaggttttgg 30253589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 40094652 - 40094596
Alignment:
Q  134 ttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttgagggaga 190  Q
    ||||||| |||||||||||  ||||||||||||||||||||  ||||||||||||||    
T  40094652 ttgcggataaaccagcaacaacgatacaagcaagtaagagcttccgcttgagggaga 40094596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 8128364 - 8128314
Alignment:
Q  134 ttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttga 184  Q
    |||||||||||||||||||| |||||||| |||||||||||  ||||||||    
T  8128364 ttgcggagaaaccagcaacgacgatacaaacaagtaagagcttccgcttga 8128314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 28300501 - 28300424
Alignment:
Q  90 tgcgcataaagaagtaacgacggtaaaaagcagtgttggtccatttgc-ggagaaaccagcaacggcgatacaagcaag 167  Q
    |||||| |||| || |||||||||| || ||||||| ||||||||||| |||||||||||||||| || ||||||||||    
T  28300501 tgcgcagaaagcagcaacgacggtacaa-gcagtgtcggtccatttgctggagaaaccagcaacgacgttacaagcaag 28300424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 30245389 - 30245443
Alignment:
Q  133 tttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttgaggg 187  Q
    |||||| ||| | |||||||||||||||||||||||||||||  |||||||||||    
T  30245389 tttgcgcagagagcagcaacggcgatacaagcaagtaagagcttccgcttgaggg 30245443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 45434491 - 45434568
Alignment:
Q  92 cgcataaagaagtaacgacggtaaaaagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaa 170  Q
    ||||||||| || ||||||| || || | ||||| ||||  ||||||||||||| ||||||||||||||||||||||||    
T  45434491 cgcataaagcagcaacgacgatacaa-gtagtgtcggtctgtttgcggagaaactagcaacggcgatacaagcaagtaa 45434568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 9901657 - 9901740
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||| ||||||| |||||| |||||||| |||||| ||| ||||| |||||| | ||||| |||||||||||||    
T  9901657 ttatatgtcc-acatcggataaaacagtaaaggttgaacatcttatacgta-gaggatccataaactcattgtcttaaggttttgg 9901740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 20599326 - 20599411
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||| ||| ||||||| |||||| | | ||||| |||||| |||||||||  |||| | ||||||||||| |||||||    
T  20599326 ttatatgtcccatatcggataaaaaagtaaaggataaacactttataaataagaggacatataaactcattgccttaacgttttgg 20599411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 28300366 - 28300314
Alignment:
Q  35 tgaacaccttataagtaagagga-cccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||| ||||||    
T  28300366 tgaacaccttataagtaagagaaccccataaacccattgccttaagattttgg 28300314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 37345815 - 37345851
Alignment:
Q  134 ttgcggagaaaccagcaacggcgatacaagcaagtaa 170  Q
    ||||||||||| |||||||||||||||||||||||||    
T  37345815 ttgcggagaaagcagcaacggcgatacaagcaagtaa 37345851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40094540 - 40094502
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaac 39  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  40094540 ttatatgtccaacatcagataaaagagtaaaggttgaac 40094502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 4e-34; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 18603266 - 18603181
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18603266 ttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgg 18603181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 26075308 - 26075223
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26075308 ttatatgtctcacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgg 26075223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 26074624 - 26074709
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||| ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26074624 ttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgg 26074709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41170646 - 41170731
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  41170646 ttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgg 41170731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 3295160 - 3295071
Alignment:
Q  2 tatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggatatg 91  Q
    ||||||||||||||| ||||||| |||||| |||||||||||||||||||||| ||||||||| ||||||||||| ||||||||| ||||    
T  3295160 tatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaacccattgccttgaggttttgggtatg 3295071  T

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Target: chr5; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 9498800 - 9498715
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| ||||||||||| || |||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  9498800 ttatatgtctcacatcagatagaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttgg 9498715  T

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Target: chr5; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 32487406 - 32487490
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  32487406 ttatatgtcccacatcggataaaatagtaaaggttgaacacct-ataagtaagaggacccataaacccattgccttaaggttttgg 32487490  T

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Target: chr5; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 40296461 - 40296376
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| || ||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  40296461 ttatatgtcccacatcggataaaatagaaaaggttgaacaccttataagtaagaggacccataaacccattgccttgaggttttgg 40296376  T

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Target: chr5; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 3295489 - 3295405
Alignment:
Q  2 tatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||| ||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  3295489 tatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaccaattgccttaaggttttgg 3295405  T

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Target: chr5; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 11417123 - 11417039
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    |||||||| ||||||| ||||||| |||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  11417123 ttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaggttttg 11417039  T

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Target: chr5; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36492363 - 36492275
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||| | |||| |||| ||||||||||||    
T  36492363 ttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggaccaataaacacattacctttaggttttggata 36492275  T

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Target: chr5; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 6224208 - 6224291
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    ||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||| | ||| |||||||||||||    
T  6224208 ttatatgtcccacttcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcatcgccttaaggtttt 6224291  T

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Target: chr5; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 13415906 - 13415821
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||  |||||| |||||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  13415906 ttatatgtcccacatcggataaattagtaaaggttgaacaccttataagtaagaggacccataaacctattaccttaaggttttgg 13415821  T

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Target: chr5; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 25327947 - 25328032
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||| ||||||| |||||| |||||||||||||||||||||||||||||||| || | ||||||||||||||||    
T  25327947 ttatatgtcctacatcggataaaacagtaaaagttgaacaccttataagtaagaggacccataaacctaatgccttaaggttttgg 25328032  T

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Target: chr5; HSP #15
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 299501 - 299585
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||||||| ||||||||| | ||| ||||||||||||||    
T  299501 ttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagatgacccataaactcatagccttaaggttttg 299585  T

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Target: chr5; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 6500463 - 6500547
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||| ||||||| |||||| |||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  6500463 ttatatgtcc-acatcggataaaatagtaaaggttgaacaccttataagtaagaggacctttaaacccattgccttaaggttttgg 6500547  T

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Target: chr5; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 26074292 - 26074207
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| ||||||| |||||| ||||||||||| ||| |||||||||||||| | |||||||||||||||||||||    
T  26074292 ttatatgtcacacatcggataaaaaagtaaaggttgaacacctcatatgtaagaggacccatgaacccattgccttaaggttttgg 26074207  T

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Target: chr5; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 26074928 - 26074843
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||||||||||||| |||||||||  |||||||| |||||||||||| || |||| |||||||||||||    
T  26074928 ttatatgtcccacatcggataaaagagtaaaggttgaacacaatataagtaggaggacccataaacctattgtcttaaggttttgg 26074843  T

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Target: chr5; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 34753171 - 34753086
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||  |||| || |||||| |||||||||||||||||||||| ||||||||| || ||||||||||||||||||    
T  34753171 ttatatgtcccacattggatagaaaagtaaaagttgaacaccttataagtaagaagacccataaaccgattgccttaaggttttgg 34753086  T

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Target: chr5; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 35150019 - 35150103
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||||||| || |||||||||||||||||||||| |||||||||  |||||| |||||||||||||    
T  35150019 ttatatgtcccacatcggataaaagagtcaaggttgaacaccttataagtaaga-gacccataaatccattgtcttaaggttttgg 35150103  T

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Target: chr5; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6500835 - 6500922
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    |||||||||| ||||| ||||||| |||||| |||||||||||||||| ||| ||||||||||| | ||||||||||||||||||||||    
T  6500835 ttatatgtcc-acatcggataaaatagtaaaggttgaacaccttataaataaaaggacccataaactcattgccttaaggttttggata 6500922  T

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Target: chr5; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 15370439 - 15370498
Alignment:
Q  26 agtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  15370439 agtaaatgttgaacaccttataagtaagaggacccataaacccatagccttaaggttttg 15370498  T

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Target: chr5; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 27502182 - 27502099
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||||||||||  ||||||| |||||| ||| |||||||||||||||||||||||||||| || ||||||||||| ||||    
T  27502182 ttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagaggacccataaacctattgccttaagatttt 27502099  T

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Target: chr5; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 36568713 - 36568630
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||||||||||| |||| || |||||| |||||||||||||||||| ||| ||||| ||| |||||||||||||||||||    
T  36568713 ttatatgtcccacatcggatagaaaagtaaaagttgaacaccttataagtgagatgacccgtaaacccattgccttaaggtttt 36568630  T

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Target: chr5; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 15370111 - 15370196
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||  |||||| |||||| |||||||| |||||||||||||||||||||||  |||  |||||||||||||||    
T  15370111 ttatatgtcccacatcgaataaaatagtaaaggttgaacatcttataagtaagaggacccataaatccacagccttaaggttttgg 15370196  T

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Target: chr5; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41632794 - 41632879
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| |||| || |||||| |||||||||||||||||||||||||||||||| |||| ||| ||||| ||||||    
T  41632794 ttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccaatgctttaagattttgg 41632879  T

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Target: chr5; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 29549401 - 29549313
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    |||||||| ||| ||||||||||| |||||| | |||||||| ||||||||||| ||||||||| | |||| |||||||||||||||||    
T  29549401 ttatatgttccatatcagataaaatagtaaaggatgaacaccatataagtaagaagacccataaacacattaccttaaggttttggata 29549313  T

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Target: chr5; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 33747783 - 33747871
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    |||||||||||||||| ||||||| |||||| ||| || || ||||||||||||||| |||||| | |||||||||||| |||||||||    
T  33747783 ttatatgtcccacatcggataaaatagtaaaggttaaatactttataagtaagaggatccataaactcattgccttaagattttggata 33747871  T

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Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 624208 - 624293
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||   |||||| |||||| ||||||||| |||||||||||| ||||||||| ||||| ||||| |||||||||    
T  624208 ttatatgtcccacattgtataaaatagtaaaggttgaacacgttataagtaagatgacccataaacccatagccttgaggttttgg 624293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 41635325 - 41635260
Alignment:
Q  13 catcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaa 78  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||  |||||| |||||    
T  41635325 catcagataaaagagtaaatgttgaacaccttataaataagaggatccataaatccattgtcttaa 41635260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 42405742 - 42405657
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||| ||||||| |||||| ||||||||||||| |||||| ||||| ||||| || | ||||||||||||||||    
T  42405742 ttatatgtccaacatcggataaaatagtaaaggttgaacaccttacaagtaaaaggactcataaacctaatgccttaaggttttgg 42405657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 26074330 - 26074398
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataacccca 69  Q
    ||||||||||||||||||||| || | ||||  ||||||||||||||||||||||||||||||| ||||    
T  26074330 ttatatgtcccacatcagatagaaaactaaagattgaacaccttataagtaagaggacccataaaccca 26074398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 1028663 - 1028580
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||||||||||| |||| || |||||| | ||||||| |||||||||||||||||||||| || ||  ||||||||||||    
T  1028663 ttatatgtcccacatcggatagaaaagtaaaggatgaacactttataagtaagaggacccataaacctataaccttaaggtttt 1028580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 42508624 - 42508707
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||| ||||||||| |||| || |||||| ||| |||| || |||||||||||||| ||||| |||||||||||||||||||    
T  42508624 ttatatatcccacatcggatagaaaagtaaaggttaaacatctaataagtaagaggactcataaacccattgccttaaggtttt 42508707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 300971 - 301025
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagag 55  Q
    |||||||||||||||||||||||| |||||| |||||| ||||||||||||||||    
T  300971 ttatatgtcccacatcagataaaacagtaaaggttgaataccttataagtaagag 301025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 39309696 - 39309754
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacc 59  Q
    |||||||||||||||| |||||||| ||||||||||||||| |||||| ||||||||||    
T  39309696 ttatatgtcccacatcggataaaagggtaaatgttgaacacattataaataagaggacc 39309754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 12662798 - 12662713
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| ||||||||  ||||||||||||  ||||||||  |||||| |||||| ||||||    
T  12662798 ttatatgtcccacatcggataaaatagtaaaggttgaacattttataagtaagaaaacccataaatccattgtcttaagtttttgg 12662713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 24489350 - 24489268
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    ||||||||||||||||||||| || || ||| ||| |||||||||| |||||||  |||||||| |||||||||||||| |||||    
T  24489350 ttatatgtcccacatcagatagaaaagaaaaggttaaacaccttattagtaaga--acccataaacccattgccttaagattttg 24489268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 35167974 - 35167921
Alignment:
Q  11 cacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataa 64  Q
    ||||||||||||||||||||| ||||||||||||||||||| || |||||||||    
T  35167974 cacatcagataaaagagtaaaggttgaacaccttataagtaggatgacccataa 35167921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 13416038 - 13415971
Alignment:
Q  117 aagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttga 184  Q
    ||||||| | ||||| ||||||||||||||| |||| |||||||||||||||||||||  ||||||||    
T  13416038 aagcagtctcggtccgtttgcggagaaaccatcaacagcgatacaagcaagtaagagcttccgcttga 13415971  T

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Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 624052 - 624136
Alignment:
Q  90 tgcgcataaagaagtaacgacggtaaaaagcagtgttggtccatttgcggagaaaccagcaacggcgatac-aagcaagtaagagc 174  Q
    |||||| ||||||| |||||||||| || | ||||| ||||| ||||||||||| |||||||||||||||| |||| |||||||||    
T  624052 tgcgcagaaagaagcaacgacggtacaa-gtagtgtcggtccgtttgcggagaacccagcaacggcgatacaaagcgagtaagagc 624136  T

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Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 35914861 - 35914934
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgcc 74  Q
    ||||||||| |||||| |||||||||||||| ||||||||  |||||||||||| ||||| |||  ||||||||    
T  35914861 ttatatgtcacacatcggataaaagagtaaaggttgaacattttataagtaagaagacccgtaaatccattgcc 35914934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 36522042 - 36521957
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||||||| || |||  | |||||||||  | ||| | ||||||||||||| || ||||||||||||||||||    
T  36522042 ttatatgtcccacatcagatagaaaagttgaggttgaacactctttaaatgagaggacccataaaccaattgccttaaggttttgg 36521957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 3295284 - 3295224
Alignment:
Q  127 ggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttgaggg 187  Q
    ||||| |||||| ||||| |||||||||||||||||||||||||||||  |||||| ||||    
T  3295284 ggtccgtttgcgcagaaagcagcaacggcgatacaagcaagtaagagcttccgcttaaggg 3295224  T

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Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6225056 - 6225104
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataag 49  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||||    
T  6225056 ttatatatcccacatcagataaaagaataaaggttgaacaccttataag 6225104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 38427560 - 38427643
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    |||||||||||||||  |||| || |||||| |||||||| ||||||||| ||||||||||| |  |||||| ||||||||||||    
T  38427560 ttatatgtcccacattggatagaaaagtaaaggttgaacatcttataagt-agaggacccattaatccattgtcttaaggttttg 38427643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7768862 - 7768925
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataa 64  Q
    |||||| ||| ||||| ||||||| | |||| |||||||||||||||||||| |||||||||||    
T  7768862 ttatatatcctacatcggataaaataataaaggttgaacaccttataagtaaaaggacccataa 7768925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 26591031 - 26590972
Alignment:
Q  26 agtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    |||||| ||||||||||||||||||||||||| ||||||   || |||||||||||||||    
T  26591031 agtaaaggttgaacaccttataagtaagaggatccataaattcaatgccttaaggttttg 26590972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5723937 - 5723876
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccat 62  Q
    |||||||||||||||| ||||||| | |||| ||||||||| ||||| ||||||| ||||||    
T  5723937 ttatatgtcccacatcggataaaataataaaagttgaacacattatatgtaagagaacccat 5723876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 25328210 - 25328263
Alignment:
Q  134 ttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttgaggg 187  Q
    |||||||||||  |||||||| |||||||||||||||||||  |||||||||||    
T  25328210 ttgcggagaaaatagcaacggtgatacaagcaagtaagagcttccgcttgaggg 25328263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 35150582 - 35150662
Alignment:
Q  90 tgcgcataaagaagtaacgacggtaaaaagcagtgttggtccatttgcggagaaaccagcaacggcgatac-aagcaagtaa 170  Q
    |||||| |||| || |||||||| || ||||||||| ||||| ||||||||||| |||||||||| ||||| ||||||||||    
T  35150582 tgcgcagaaagcagcaacgacgg-aacaagcagtgtcggtccgtttgcggagaacccagcaacggtgatacaaagcaagtaa 35150662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 38427454 - 38427495
Alignment:
Q  133 tttgcggagaaaccagcaacggcgatacaagcaagtaagagc 174  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  38427454 tttgcgcagaaaccagcaacgacgatacaagcaagtaagagc 38427495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 2411019 - 2411103
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    |||||||||| ||||  |||| |  |||||| |||||||| ||| |||||||||| |||||||| |  |||||||||||||||||    
T  2411019 ttatatgtcctacattggatagagaagtaaaagttgaacatcttgtaagtaagagaacccataaacttattgccttaaggttttg 2411103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 13785868 - 13785818
Alignment:
Q  134 ttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttga 184  Q
    ||||||||||| |||||||  ||||||||||||||||||||  ||||||||    
T  13785868 ttgcggagaaagcagcaacaccgatacaagcaagtaagagcttccgcttga 13785818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 13042606 - 13042639
Alignment:
Q  56 gacccataaccccattgccttaaggttttggata 89  Q
    ||||||||| ||||||||||||||||||||||||    
T  13042606 gacccataaacccattgccttaaggttttggata 13042639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 623830 - 623914
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    ||||||||| |||||| |||| || |||||| ||||||||| ||| |||||||  || |||||| |  || ||||||||||||||    
T  623830 ttatatgtctcacatcggatataatagtaaaggttgaacactttacaagtaagttgagccataaacttatagccttaaggttttg 623914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 41157387 - 41157471
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  41157387 ttatatgtcccacatcagataaaagagtaaaagttgaacaccttataagtaagaggacccataaacccattgcctttaggttttg 41157471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 17294589 - 17294674
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  17294589 ttatatgtcccacatcggataaaagagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttttgg 17294674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 44290971 - 44290886
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44290971 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgg 44290886  T

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Target: chr1; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3550732 - 3550817
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  3550732 ttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaagttttgg 3550817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 44290604 - 44290519
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  44290604 ttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgg 44290519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 41142384 - 41142467
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  41142384 ttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaaaaggacccataaacccattgccttaaggtttt 41142467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 26661668 - 26661583
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| | |||||||||||| |||||||||||||||||| ||||||||||||| | |||||||||||||||||||    
T  26661668 ttatatgtcccacatcgggtaaaagagtaaaggttgaacaccttataagtgagaggacccataaactcattgccttaaggttttgg 26661583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 32594862 - 32594777
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  32594862 ttatatgtcctacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgg 32594777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 41184571 - 41184489
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttt 83  Q
    ||||||||| |||||| ||||||| |||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  41184571 ttatatgtctcacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttt 41184489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3537745 - 3537660
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||| |||||||||||| |||| ||||||| |||||||||||||    
T  3537745 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttatgagtaagaggacctataaacccattggcttaaggttttgg 3537660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 26662044 - 26661959
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||| ||||| |||||||||||||||||| |||||||||||||||||| ||| ||||||||| || ||||||||||||||||||    
T  26662044 ttatatatcccatatcagataaaagagtaaaggttgaacaccttataagtgagaagacccataaaccgattgccttaaggttttgg 26661959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 34364937 - 34365022
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| ||||||| | |||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  34364937 ttatatgtcacacatcggataaaataataaaggttgaacaccttataagtaagaggacccataaacccatagccttaaggttttgg 34365022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41157003 - 41157088
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||| | | |||||||||||||| |||||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  41157003 ttatatgtcccataacggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcattgctttaaggttttgg 41157088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 29798211 - 29798299
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    |||||||||| ||||  ||||||| |||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  29798211 ttatatgtcctacattggataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggtcttggata 29798299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 3875477 - 3875394
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    ||||||||| |||||| ||||||| |||||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||    
T  3875477 ttatatgtcacacatcggataaaaaagtaaaggttgtacaccttataagtaagaggactcataaacccattgccttaaggtttt 3875394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 11977292 - 11977377
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| | ||||| |||||||||||||||||||||||||||||| || ||||| || | ||||||||||||||||    
T  11977292 ttatatgtcccacatcgggtaaaacagtaaatgttgaacaccttataagtaagagcactcataaacctaatgccttaaggttttgg 11977377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 31767307 - 31767222
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||| ||||||| ||||||| |||||| |||||||||||||||||||||||||||||| | || | ||||||||||||||||    
T  31767307 ttatatgttccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccattaacctaatgccttaaggttttgg 31767222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 34364519 - 34364604
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| ||||||| |||||| ||||||||||||||||||||||||| || ||| ||||| |||||||||||||||    
T  34364519 ttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccgtaaacccatagccttaaggttttgg 34364604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41759495 - 41759580
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| ||||||| |||||| |||||||||||||||||||||| || ||||||  ||||||||||||||||||||    
T  41759495 ttatatgtcacacatcggataaaatagtaaaagttgaacaccttataagtaagatgatccataaatccattgccttaaggttttgg 41759580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5575116 - 5575204
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    ||||||||||||| || |||| ||||||||| ||||||||||||||||||||||||||| ||||  |||| || |||||||||||||||    
T  5575116 ttatatgtcccacgtcggatagaagagtaaaggttgaacaccttataagtaagaggacctataaatccatagctttaaggttttggata 5575204  T

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Target: chr1; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 37555963 - 37556047
Alignment:
Q  90 tgcgcataaagaagtaacgacggtaaaaagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagc 174  Q
    |||||| |||| || |||| ||||| |||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  37555963 tgcgcaaaaagcagcaacggcggtacaaagcagtgtcggtccgtttgcggagaaaccagcaacggcgatagaagcaagtaagagc 37556047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3537293 - 3537230
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataa 64  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||    
T  3537293 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataa 3537230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 9955919 - 9956006
Alignment:
Q  1 ttatatgtcccacatcagataaaaga-gtaaatgttgaacaccttataagtaagaggaccca-taaccccattgccttaaggttttgg 86  Q
    |||||||||||||||||||||||| | ||||| ||||||||| ||||||||||||||||||| ||| || ||||||||||||||||||    
T  9955919 ttatatgtcccacatcagataaaaaaagtaaaggttgaacacattataagtaagaggacccattaaaccaattgccttaaggttttgg 9956006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 5320111 - 5320026
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||| ||||||| |||| || |||||| |||||||||||||||||| ||||||||||||| | ||| |||||||||||||||    
T  5320111 ttatatgttccacatcggatagaaaagtaaaagttgaacaccttataagtgagaggacccataaactcatagccttaaggttttgg 5320026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 14318879 - 14318964
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||| |||| || ||||||| |||||| |||||||||||||||||||||| |||||||||  | ||||||||||||||||||    
T  14318879 ttatatgttccacgtcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaatctattgccttaaggttttgg 14318964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 22077641 - 22077556
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| |||| || |||||| |||||||||||||||||||||||||||||||| | | | |||||||||||||||    
T  22077641 ttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaactcgtagccttaaggttttgg 22077556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 34649450 - 34649535
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||   || |||||||| || | ||||||||||||||||    
T  34649450 ttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtgcaagaacccataaacctaatgccttaaggttttgg 34649535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 38804501 - 38804416
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||| ||||||||||  ||||||||||||| ||||||||| ||||||||||||||| |||||| |||||  ||||||||||||||    
T  38804501 ttatacgtcccacatcgaataaaagagtaaaggttgaacacattataagtaagaggatccataaacccataaccttaaggttttgg 38804416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 50052169 - 50052084
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| |||||||| ||||||||||||||||||||||| || |||  ||||| |||||||    
T  50052169 ttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacctattttcttaaagttttgg 50052084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 45084394 - 45084458
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataac 65  Q
    |||||| ||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||    
T  45084394 ttatatctcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataac 45084458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 37556123 - 37556208
Alignment:
Q  1 ttatatgtcccacatcagataaaag-agtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||||||  |||||| |||||||| |||||||||||||||| |||||| ||||| |||||||||||||||    
T  37556123 ttatatgtcccacatcggataaaaatagtaaaggttgaacatcttataagtaagagga-ccataaacccatagccttaaggttttgg 37556208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 48588631 - 48588549
Alignment:
Q  4 tatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||| ||||| ||||||| |||||| |||||||||||||||||||||| ||||| |||   |||||||||||||||||||    
T  48588631 tatgtccgacatcggataaaatagtaaaggttgaacaccttataagtaagaagacccgtaaattcattgccttaaggttttgg 48588549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 5528900 - 5528815
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| |||||||||||||| |||||||| ||||||| ||||||||| ||||| | ||||  |||||||||||||    
T  5528900 ttatatgtctcacatcggataaaagagtaaaggttgaacatcttataaataagaggactcataaactcattttcttaaggttttgg 5528815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 34649700 - 34649757
Alignment:
Q  117 aagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagc 174  Q
    ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34649700 aagcagtttcggtccatttgcggagaaaccagcaacgacgatacaagcaagtaagagc 34649757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 40082419 - 40082503
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||| ||||||| |||||| |||||||||||||||||||||||||  |||||   |||||||||||||||||||    
T  40082419 ttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagga-tcataaattcattgccttaaggttttgg 40082503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 44043893 - 44043833
Alignment:
Q  26 agtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||||||    
T  44043893 agtaaatgttgaacaccttataagtaagatgacccataaacccattgtcttaagattttgg 44043833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 22077231 - 22077168
Alignment:
Q  26 agtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    |||||| |||||| ||||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  22077231 agtaaaggttgaataccttataagtaagaggacccataaactcattgccctaaggttttggata 22077168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 45494124 - 45494032
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacacc----ttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    |||||||||||||||| ||||||| |||||| ||||||||||     ||||||||||| || |||||| ||||||||||||| ||||||||||    
T  45494124 ttatatgtcccacatcggataaaatagtaaaggttgaacaccatatatataagtaagatgatccataaacccattgccttaaagttttggata 45494032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 66230 - 66148
Alignment:
Q  5 atgtcccacatcagataaaagagtaaatgtt-gaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||| |||||| |||| || |||||| ||| ||||||||||||||||||||||||||||| || || |||||||||||||||    
T  66230 atgtctcacatcggatagaaaagtaaaggtttgaacaccttataagtaagaggacccataaacctatggccttaaggttttgg 66148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 24132131 - 24132049
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttt 83  Q
    ||||||||||| |||| |||| || |||||| |||||||||||||||| |||| ||| |||||| | ||||||||||||||||    
T  24132131 ttatatgtccctcatcggatagaaaagtaaaggttgaacaccttataaataaggggatccataaactcattgccttaaggttt 24132049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 66618 - 66533
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||| ||| ||| |||| || |||||| ||||||||||||||||||||||||| |||||| |  || |||||||||||||||    
T  66618 ttatatgttccatatcggatagaaaagtaaaggttgaacaccttataagtaagaggatccataaacatatggccttaaggttttgg 66533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 37850746 - 37850658
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    ||||||||||||||||  |||||| |||| | ||||||||||||||||||||||| |||||||| || | ||  ||||||||| |||||    
T  37850746 ttatatgtcccacatcgcataaaacagtagaggttgaacaccttataagtaagagaacccataaacctaatgttttaaggtttcggata 37850658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 39066346 - 39066258
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    |||||| | ||||||| |||| || |||||| |||||||||||||||| ||||| |||||||||   ||||| ||||||||||||||||    
T  39066346 ttatatattccacatcggatagaaaagtaaaggttgaacaccttataactaagatgacccataaaatcattgtcttaaggttttggata 39066258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4266928 - 4266875
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaaga 54  Q
    |||||||||| |||| ||||||||||||||||||||||||| ||| ||||||||    
T  4266928 ttatatgtcctacattagataaaagagtaaatgttgaacacattagaagtaaga 4266875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 21378187 - 21378118
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccat 70  Q
    |||||||||||| ||| |||| || |||||| |||||| | ||||||||||||||||||||||| |||||    
T  21378187 ttatatgtcccagatcggatagaacagtaaaggttgaatatcttataagtaagaggacccataaacccat 21378118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 30630784 - 30630699
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| ||||||| | |||| |||  |||| ||||||||||||| |||||||| | ||||||||||| |||||||    
T  30630784 ttatatgtctcacatcggataaaaaattaaaggtttgacactttataagtaagagaacccataaacacattgccttaaagttttgg 30630699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 24600460 - 24600376
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    |||||||||||| ||| |||| || |||||| ||||||||  ||||||||||||| || ||||| | ||||| ||||||||||||    
T  24600460 ttatatgtcccatatcggatagaaaagtaaaggttgaacatattataagtaagagaactcataaactcattgtcttaaggttttg 24600376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 44685468 - 44685551
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgtt-gaacaccttataagtaagaggacccataaccccattgccttaaggttt 83  Q
    |||||||||||| ||| |||| || |||||| ||| ||| |||||||||||||||||||| |||| | ||||||||||| ||||    
T  44685468 ttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaatgttt 44685551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 41184197 - 41184152
Alignment:
Q  38 acaccttataagtaagaggacccataaccccattgccttaaggttt 83  Q
    |||| ||||||||||||||| |||||| ||||||||||||||||||    
T  41184197 acactttataagtaagaggatccataaacccattgccttaaggttt 41184152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 47380043 - 47379990
Alignment:
Q  134 ttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttgaggg 187  Q
    ||||||||||| |||||||| |||||||||||||||||| |  |||||||||||    
T  47380043 ttgcggagaaagcagcaacgacgatacaagcaagtaagaacttccgcttgaggg 47379990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 22077380 - 22077340
Alignment:
Q  134 ttgcggagaaaccagcaacggcgatacaagcaagtaagagc 174  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  22077380 ttgcggagaaaccggcagcggcgatacaagcaagtaagagc 22077340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 35154185 - 35154150
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttg 36  Q
    ||||||||||||||||||||||||||||||| ||||    
T  35154185 ttatatgtcccacatcagataaaagagtaaaggttg 35154150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 41184298 - 41184231
Alignment:
Q  121 agtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagt-aagagcccccgcttgaggg 187  Q
    ||||| ||||| |||||||| |||||||||||| |||||||| ||||| ||||||  |||||||||||    
T  41184298 agtgtcggtccgtttgcggaaaaaccagcaacgacgatacaaacaagtaaagagcttccgcttgaggg 41184231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 22077753 - 22077703
Alignment:
Q  134 ttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttga 184  Q
    ||||||||||||||| |||| |||||||||||| |||||||  ||||||||    
T  22077753 ttgcggagaaaccagtaacgacgatacaagcaattaagagcttccgcttga 22077703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 34364820 - 34364874
Alignment:
Q  133 tttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttgaggg 187  Q
    |||||||| ||||||||||| |||| ||||||||||||||||  ||| |||||||    
T  34364820 tttgcggaaaaaccagcaacagcgacacaagcaagtaagagcttccgattgaggg 34364874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 37555742 - 37555800
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacc 59  Q
    ||||| |||||||||| ||||||| ||| || |||||| || |||||||||||||||||    
T  37555742 ttataagtcccacatcggataaaatagtgaaggttgaatacattataagtaagaggacc 37555800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 22793290 - 22793375
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataacccca-ttgccttaaggttttg 85  Q
    ||||||||||||||||  ||| || |||| | |||||| || |||||||| |||||| |||||| |||| |||||||| |||||||    
T  22793290 ttatatgtcccacatcgtatagaaaagtagaggttgaaaactttataagtgagaggatccataaacccatttgccttacggttttg 22793375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 32168821 - 32168759
Alignment:
Q  18 gataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||| |||||| |||||||||||||      ||||||||||||| ||||||||||| |||||||||    
T  32168821 gataaaatagtaaaggttgaacacctta------agaggacccataaacccattgccttgaggttttgg 32168759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 22077947 - 22077911
Alignment:
Q  28 taaatgttgaacaccttataagtaagaggacccataa 64  Q
    |||| |||||||| |||||||||||||||||||||||    
T  22077947 taaaggttgaacatcttataagtaagaggacccataa 22077911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 6e-33; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 16108075 - 16108154
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaagg 80  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16108075 ttatatgttccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaacccattgccttaagg 16108154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2377766 - 2377851
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2377766 ttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgg 2377851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3409271 - 3409356
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  3409271 ttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgg 3409356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 16454587 - 16454675
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  16454587 ttatgtgtcccacatcagataaaagaataaaagttgaacaccttataagtaagaggacccataaacccattgccttaagattttggata 16454675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 16454919 - 16455004
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| || ||||||||||||||||||    
T  16454919 ttatgtgtcccacatcagataaaagagtaaaggttgaacaccttataagtaataggacccataaacctattgccttaaggttttgg 16455004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29518515 - 29518600
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  29518515 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgg 29518600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29518932 - 29519017
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  29518932 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgg 29519017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 32741191 - 32741276
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  32741191 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgg 32741276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 2378138 - 2378221
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  2378138 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggtttt 2378221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 3415470 - 3415553
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    ||||||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  3415470 ttatatgtcccacatcacataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccattgccttaaggtttt 3415553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 2580018 - 2579933
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  2580018 ttatatgtcccacatcggataaaagagtaaaggttgaacacattataagtaagaggacccataaacccacagccttaaggttttgg 2579933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3058238 - 3058323
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||    
T  3058238 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtatgaggatccataaacccattgccttaaggttttgg 3058323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 10074137 - 10074052
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||| ||||||||| |||| || |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10074137 ttatatatcccacatcggatagaaaagtaaacgttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgg 10074052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 32460726 - 32460641
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||  |||||| |||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  32460726 ttatatgtcccacatcgtataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggttttgg 32460641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 35210216 - 35210301
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| ||||||| |||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  35210216 ttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaaccattgccttaaggttttgg 35210301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 593852 - 593770
Alignment:
Q  4 tatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| || | ||||||||||||||||    
T  593852 tatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaaccgactgccttaaggttttgg 593770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 1846763 - 1846848
Alignment:
Q  4 tatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    |||||| |||||| ||||||| |||||| ||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  1846763 tatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagcacccataaatccattgccttaaggttttggata 1846848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 2578588 - 2578504
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||| | |||||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||||||||    
T  2578588 ttatatgtcccaca-cggataaaagagtaaaggttgaacactttataagtaagaggacccataaacccatagccttaaggttttgg 2578504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 14748484 - 14748399
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||| ||||||||||||||| | |||||| ||||||||||||    
T  14748484 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacccataaactcattgcgttaaggttttgg 14748399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 26544061 - 26544145
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    |||||||||||||||| ||||||| |||||| ||||||||| |||||||||||||||||||||| ||||  ||||||||||||||    
T  26544061 ttatatgtcccacatcggataaaatagtaaaggttgaacacgttataagtaagaggacccataaacccaccgccttaaggttttg 26544145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 3409672 - 3409747
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgcctt 76  Q
    |||||||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||| |||||||||||    
T  3409672 ttatatgtaccacatcagataaaatagtaaaagttgaacatcttataagtaagaggacccataaacccattgcctt 3409747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 10074503 - 10074424
Alignment:
Q  7 gtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| |||| || |||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  10074503 gtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgg 10074424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 1127372 - 1127457
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||| ||||||||| | ||||| |||||| |||||||||||||||||||||||||| ||||| |||||| ||||||||||||||    
T  1127372 ttatatatcccacatcgggtaaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattaccttaaggttttgg 1127457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 16107690 - 16107775
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||  |||||| ||||||| |||||| ||| |||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  16107690 ttatatgtgtcacatcggataaaaaagtaaaggttaaacaccttataagtaagaggactcataaacccattgccttaaggttttgg 16107775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 1950331 - 1950247
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    |||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||| ||||||  | | |||||||||||||||    
T  1950331 ttatatgtcccacatcggataaaagagtaaaggttgaacaccttacaagtaagaggagccataaatctaatgccttaaggttttg 1950247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 6999942 - 6999854
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    |||||||||| ||||| ||||||| |||||| ||||||||||||||| ||||||||| |||||| | || |||||||||||||||||||    
T  6999942 ttatatgtcctacatcggataaaaaagtaaaagttgaacaccttatatgtaagaggatccataaactcactgccttaaggttttggata 6999854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 5832172 - 5832109
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataa 64  Q
    |||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||    
T  5832172 ttatatgtcccacattggataaaagagtaaaggttgaacaccttataagtaagaggacccataa 5832109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 10911577 - 10911662
Alignment:
Q  1 ttatatgtcccacatcagataaaaga-gtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    |||||||||| ||||||||||||| | ||||| |||||||||||||||||||||||||| ||||| | ||||||||||| ||||||    
T  10911577 ttatatgtcctacatcagataaaaaaagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaaagttttg 10911662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2843566 - 2843652
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagagga-cccataaccccattgccttaaggttttgg 86  Q
    ||||||||  |||||| ||||||| | |||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||||    
T  2843566 ttatatgtttcacatcggataaaataataaaagttgaacaccttataagtaagaggaccccataaactcattgccttaaggttttgg 2843652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 9062495 - 9062417
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaag 79  Q
    |||||||||||||||| ||||||| |||||| |||||||| ||||||||||||||||| ||||| | ||||| ||||||    
T  9062495 ttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggactcataaactcattgtcttaag 9062417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 2578980 - 2578896
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||| |||| ||||||| ||||||||||||| ||||||||| |||||||| |||||| | |||| ||||||||||||||    
T  2578980 ttatatgtccctcatcggataaaa-agtaaatgttgaataccttataaataagaggatccataaactcattaccttaaggttttgg 2578896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 2579638 - 2579553
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| || |||| |||||| || | | ||||||||||||||||| ||||||| | |||||||||||||||||||    
T  2579638 ttatatgtcccacatcggacaaaaaagtaaaggtcggataccttataagtaagagggcccataaactcattgccttaaggttttgg 2579553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 2578731 - 2578673
Alignment:
Q  116 aaagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagc 174  Q
    |||||||||| ||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  2578731 aaagcagtgtcggtctgtttgcggagaaaccaacaacggcgatacaagcaagtaagagc 2578673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 2579414 - 2579320
Alignment:
Q  90 tgcgcataaagaagtaacgacggtaaaaagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttga 184  Q
    |||||| |||| || |||| ||||| ||||| |||| ||||  ||||| |||||||||||||||||||||||| |||||||||||  ||||||||    
T  2579414 tgcgcagaaagcagcaacggcggtacaaagcggtgtcggtctgtttgcagagaaaccagcaacggcgatacaaacaagtaagagcttccgcttga 2579320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 10073760 - 10073677
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| || |||||  |||| ||||||||||||||||||||||||| |||||| | ||||| |||||| ||||||    
T  10073760 ttatatgtcccacatcggagaaaag--taaaggttgaacaccttataagtaagaggatccataaactcattggcttaagattttgg 10073677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 2975567 - 2975648
Alignment:
Q  4 tatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    |||||||||||||| ||| || |||||||||||||||||||||||| |||| |||||||||  || ||| ||||| ||||||    
T  2975567 tatgtcccacatcaaatagaaaagtaaatgttgaacaccttataagcaagatgacccataaatcctttgtcttaaagttttg 2975648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2579251 - 2579203
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataag 49  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  2579251 ttatatgtcccacatcggataaaagagtaaaagttgaacaccttataag 2579203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 16107931 - 16108010
Alignment:
Q  105 aacgacggtaaaaagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttga 184  Q
    |||| ||||| |||||||||| ||||  |||||| ||||||||||||||||||| |||| ||||||||||  ||||||||    
T  16107931 aacggcggtacaaagcagtgtcggtctgtttgcgaagaaaccagcaacggcgatgcaagaaagtaagagcttccgcttga 16108010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 33605875 - 33605915
Alignment:
Q  134 ttgcggagaaaccagcaacggcgatacaagcaagtaagagc 174  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  33605875 ttgcggagaaaccagcaacgacgatacaagcaagtaagagc 33605915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 5958738 - 5958664
Alignment:
Q  12 acatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||| ||||||| |||||| |||||||||||||||| |||||| || ||||| | ||||| ||||| |||||||    
T  5958738 acatcggataaaacagtaaaggttgaacaccttataaataagagaactcataaactcattgtcttaaagttttgg 5958664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 35210498 - 35210551
Alignment:
Q  9 cccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccat 62  Q
    |||||||| ||||||| |||||| |||||| ||||| |||||||||||||||||    
T  35210498 cccacatcggataaaatagtaaaggttgaataccttgtaagtaagaggacccat 35210551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 12092624 - 12092544
Alignment:
Q  5 atgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    |||||||||||| |||| || |||  | ||||| ||| |||||||| |||||| |||||| | ||||||||||||||||||    
T  12092624 atgtcccacatcggatagaaaagtggaggttgagcactttataagtgagaggatccataaactcattgccttaaggttttg 12092544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 29518801 - 29518872
Alignment:
Q  117 aagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagc-aagtaagagcccccgcttgaggg 187  Q
    ||||||||| ||||| |||| ||||||||||||||||| || ||| || ||||||||||  |||||||||||    
T  29518801 aagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgaggg 29518872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 14789325 - 14789287
Alignment:
Q  26 agtaaatgttgaacaccttataagtaagaggacccataa 64  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  14789325 agtaaaggttgaacaccttacaagtaagaggacccataa 14789287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 6071176 - 6071232
Alignment:
Q  33 gttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    ||||||||| |||||||| ||| || |||||| | |||||||||||| |||||||||    
T  6071176 gttgaacactttataagtgagatgatccataaactcattgccttaagattttggata 6071232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 70; Significance: 9e-32; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 660 - 575
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  660 ttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgg 575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 288 - 230
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacc 59  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||    
T  288 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacc 230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 9e-32; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 15880275 - 15880360
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15880275 ttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgg 15880360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 36178751 - 36178666
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36178751 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgg 36178666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 14745813 - 14745728
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||  ||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14745813 ttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgg 14745728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 37106200 - 37106285
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  37106200 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccatttccttaaggttttgg 37106285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 6421397 - 6421482
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| | ||||||||| |||||||||    
T  6421397 ttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttgaggttttgg 6421482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 6712988 - 6713071
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  6712988 ttatatgtctcacatcggataaaacagtaaatgttgaacaccttataagtaagaggacccataaacctattgctttaaggtttt 6713071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 40733529 - 40733592
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataa 64  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40733529 ttatatgtcccacatcagataaaaaagtaaatgttgaacaccttataagtaagaggacccataa 40733592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 41283621 - 41283538
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||||||| ||| ||||||| |||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  41283621 ttatatgtcccatatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggtttt 41283538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 962610 - 962695
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||| || |||||| |||||||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  962610 ttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgagaggacccataaacccattgtcttaaggttttgg 962695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 5543144 - 5543059
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||| |||||| || ||||||||||| ||||||    
T  5543144 ttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggatccataaacctattgccttaagattttgg 5543059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 7598621 - 7598686
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataacc 66  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  7598621 ttatatgtcccacatcagataaaaaagtaaaggttgaacaccttataagtaagaggacccataacc 7598686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 28254383 - 28254298
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||| || |||||| |||||||| ||||||||||||||||||||||| | |||||||||||||||||||    
T  28254383 ttatatgtcccacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaactcattgccttaaggttttgg 28254298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 35580869 - 35580785
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||    
T  35580869 ttatatgtcccacatcggataaaacaataaatgttgaacaccttataagtgagagga-ccataaacccattgccttaaggttttgg 35580785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 38796766 - 38796681
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| | |||| |||||||||||||||||||||||||||||||| || | ||||||||||||||||    
T  38796766 ttatatgtcccacatctgataaaacaataaaggttgaacaccttataagtaagaggacccataaacctaatgccttaaggttttgg 38796681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 42514661 - 42514746
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| |||||||||| || |||||| |||||||||||||||||||||||||||||||| ||||| |||||||| ||||||    
T  42514661 ttatatgtcctacatcagatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccatcgccttaagattttgg 42514746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 31899572 - 31899496
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgcctta 77  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  31899572 ttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaactcattgcctta 31899496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 5542771 - 5542688
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||||||| |||  |||||| |||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  5542771 ttatatgtcccatatcgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaaggtttt 5542688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 6422126 - 6422205
Alignment:
Q  5 atgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||||||||||||||| |||||| ||||||||| |||||| ||||||||||||||| ||||| |||||||||||||    
T  6422126 atgtcccacatcagataaaaaagtaaaggttgaacacattataattaagaggacccataaacccatagccttaaggtttt 6422205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 15511641 - 15511556
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||| | |||||||||||||| ||||||||| |||||||||||||||||||||| ||||||| |||||| ||||||    
T  15511641 ttatatgtcacacaacggataaaagagtaaaggttgaacacgttataagtaagaggacccataaacccattgtcttaagattttgg 15511556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 33731660 - 33731745
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||| || |||||| |||||||||||||| ||||| ||||||||||||||||||| |||||| || ||||||||||||||||||    
T  33731660 ttatatatctcacatcggataaaagagtaaaggttgagcaccttataagtaagaggatccataaacctattgccttaaggttttgg 33731745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 36006025 - 36005941
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||  ||| || |||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  36006025 ttatatgtcccacatcgaatagaa-agtaaaagttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgg 36005941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 37105936 - 37106021
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||  |||||| |||||| ||||||||||||||||||||| |||||||||| | |||||||||||| ||||||    
T  37105936 ttatatgtcccacatcgaataaaatagtaaaggttgaacaccttataagtaaggggacccataaactcattgccttaagattttgg 37106021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 36178311 - 36178232
Alignment:
Q  7 gtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||||| | |||||||| |||||||||||||| ||||||    
T  36178311 gtcccacatcggataaaatagtaaaggttgaacaccttataagtaagggaacccataaacccattgccttaagattttgg 36178232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38796364 - 38796301
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataa 64  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  38796364 ttatatgtcccacatcggataaaacagtaaatgttgaacaccttataagtaagaggacctataa 38796301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 14745440 - 14745355
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||  |||||| |||||  |||||||| ||| |||||| |||||||||||| |||||||||||||||||||||    
T  14745440 ttatatgtcccacatcgaataaaatagtaatggttgaacatcttgtaagtatgaggacccataaacccattgccttaaggttttgg 14745355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 28531460 - 28531375
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||| || || ||| |||||||||||||||||||||||| ||||||| | |||||||||||| ||||||    
T  28531460 ttatatgtcccacatcggatagaaaagcaaaggttgaacaccttataagtaagaggtcccataaactcattgccttaagattttgg 28531375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 36178415 - 36178330
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||| || ||||||| |||||| || |||||||||||||||||| |||| ||||| ||||||| |||||||||||||    
T  36178415 ttatatgtcccacttcggataaaatagtaaaggtggaacaccttataagtaaggggactcataaacccattgtcttaaggttttgg 36178330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 29874169 - 29874081
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    ||||||||||||||||||||| || |||  | ||||||||| |||||| |  |||||||||||| ||||||||||||||||||||||||    
T  29874169 ttatatgtcccacatcagatagaaaagtggaggttgaacactttataattgggaggacccataaacccattgccttaaggttttggata 29874081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1769904 - 1769967
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataa 64  Q
    ||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||| |||||    
T  1769904 ttatatgtcacacatcggataaaagagtaaaagttgaacaccttataagtaagaggactcataa 1769967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 40679775 - 40679690
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||| ||| |||| || |||||  ||||||||||||||||||||||| |||||||| ||||| |||||||| ||||||    
T  40679775 ttatatgtcccatatcggatagaaaagtaagggttgaacaccttataagtaagagaacccataaacccatcgccttaagattttgg 40679690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 12529174 - 12529086
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    |||||||||| |||||| |||||| ||||||  ||||||||| ||||||||||||||| ||||| | ||||||||||| ||||| ||||    
T  12529174 ttatatgtcctacatcaaataaaacagtaaagattgaacaccgtataagtaagaggactcataaactcattgccttaaagttttagata 12529086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 16542461 - 16542545
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    ||||| |||||||||| ||||||| |||||| |||||||||||||||| |||||||||  |||| | |||||||||||| |||||    
T  16542461 ttataagtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacttataaactcattgccttaagattttg 16542545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 31259765 - 31259677
Alignment:
Q  1 ttatatgtcccacatca---gataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||||   |||||||||||||| ||| |||||||||||||||||| ||||||||| || ||  ||||||||||||||    
T  31259765 ttatatgtctcacatcatcggataaaagagtaaaggttcaacaccttataagtaagatgacccataaacctatcaccttaaggttttgg 31259677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37895207 - 37895122
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||| || | |||| |||||| |||||| |||||| || || ||||| |||||||||||||||||||||    
T  37895207 ttatatgtcccacatcggatagaaaaataaaagttgaaaaccttaaaagtaaaagaacacataaacccattgccttaaggttttgg 37895122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40163519 - 40163458
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccat 62  Q
    |||||||||||||||| |||| || |||||| |||||||||||||||||||||| |||||||    
T  40163519 ttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccat 40163458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 5367468 - 5367552
Alignment:
Q  2 tatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||| ||| |||||||||| ||| |||||||||||||||||||||| || |||| | | |||  ||||||||||||||    
T  5367468 tatatgtcccagatcggataaaagagcaaaggttgaacaccttataagtaagatgatccatgaacacataaccttaaggttttgg 5367552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 29676915 - 29676999
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagag-----gacccataaccccattgccttaagg 80  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||| || ||||     ||||||||| |||||||||||||||    
T  29676915 ttatatgtcccacatcggataaaagagtaaaggtttaacaccttataggtgagaggagaagacccataaacccattgccttaagg 29676999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 31468892 - 31468811
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| |||||| | ||||||||    ||||||||||| | |||||||||||||||||||    
T  31468892 ttatatgtcccacatcggataaaatagtaaaggttgaatatcttataag----aggacccataaactcattgccttaaggttttgg 31468811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 42514912 - 42514963
Alignment:
Q  134 ttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttgag 185  Q
    ||||||||||||||||||| |||||||||||||||||||||  |||||||||    
T  42514912 ttgcggagaaaccagcaacagcgatacaagcaagtaagagcttccgcttgag 42514963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 7598240 - 7598325
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||| | |||||  ||| || |||||| ||| |||||||||||| ||||||||||||||| | ||| |||||||||||||||    
T  7598240 ttatatgttctacatcgaatagaaaagtaaaggttcaacaccttataaataagaggacccataaactcatagccttaaggttttgg 7598325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 31385781 - 31385834
Alignment:
Q  33 gttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||| |||||||||||| | ||||||||||| |||||||||||||||||||||    
T  31385781 gttgagcaccttataagtgaaaggacccataaacccattgccttaaggttttgg 31385834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 33561597 - 33561512
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||| |||||||||||| || |||  | ||| ||||| |||||||| ||||||||||||| | ||||| |||||||||||||    
T  33561597 ttatatgttccacatcagatagaaaagtggaggttaaacactttataagtgagaggacccataaactcattgtcttaaggttttgg 33561512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37632743 - 37632658
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||| ||||||| |||||| |||  |||  |||||||||||||||||||||| |||||  | ||||||||||||    
T  37632743 ttatatgtcctacatcggataaaatagtaaaggtttgacattttataagtaagaggacccataaacccataactttaaggttttgg 37632658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 40733895 - 40733960
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataacc 66  Q
    ||||||||||||||||  |||||||||||||  || |||||||||||||||||||| | |||||||    
T  40733895 ttatatgtcccacatcgaataaaagagtaaagatttaacaccttataagtaagagggctcataacc 40733960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 38796487 - 38796443
Alignment:
Q  128 gtccatttgcggagaaaccagcaacggcgatacaagcaagtaaga 172  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||    
T  38796487 gtccgtttgcggagaaaccagcaacgacgatacaagcaagtaaga 38796443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 29676547 - 29676622
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgcctt 76  Q
    ||||||||| |||||  ||||||||||||||  |||||||| |||||||| |||| |||||||| | |||||||||    
T  29676547 ttatatgtctcacattggataaaagagtaaagattgaacacattataagtgagagaacccataaactcattgcctt 29676622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 23346250 - 23346331
Alignment:
Q  2 tatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||| ||||||  ||| || |||||| ||| |||||||||||| ||||||| ||||||| ||||| |||||||||||||    
T  23346250 tatatgtctcacatcgtatagaaaagtaaaggttaaacaccttataa-taagagggcccataaacccatagccttaaggtttt 23346331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 28254254 - 28254176
Alignment:
Q  5 atgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttt 83  Q
    ||||| |||||| |||| || |||||| ||||||||| |||||||||||||||| ||||| | | ||||||||| ||||    
T  28254254 atgtctcacatcggatagaaaagtaaaggttgaacactttataagtaagaggactcataaacactttgccttaaagttt 28254176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 36785825 - 36785771
Alignment:
Q  133 tttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttgaggg 187  Q
    ||||| ||||||||||||||| |||||||| |||||||||||  |||||||||||    
T  36785825 tttgcagagaaaccagcaacgacgatacaaccaagtaagagcttccgcttgaggg 36785771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 16590900 - 16590978
Alignment:
Q  1 ttatatgtcccacatcagataaaaga-gtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    ||||||||||||||||| |||||| | ||||| ||||||||      |||||||||||||||||| | |||||||||||||||||    
T  16590900 ttatatgtcccacatcaaataaaaaaagtaaaggttgaaca------aagtaagaggacccataaacacattgccttaaggtttt 16590978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30323476 - 30323561
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||| |||||||| || | |  | ||||||||| ||| |||| |||||||| |||| | |||||||||||||||||||    
T  30323476 ttatatgtcccaaatcagatagaaaattggaggttgaacactttagaagtgagaggacctataaactcattgccttaaggttttgg 30323561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36785709 - 36785664
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttat 46  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||||    
T  36785709 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttat 36785664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 23346497 - 23346541
Alignment:
Q  117 aagcagtgttggtccatttgcggagaaaccagcaacggcgataca 161  Q
    ||||||||| ||||  |||||||||||||||||||||||||||||    
T  23346497 aagcagtgtcggtctgtttgcggagaaaccagcaacggcgataca 23346541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 29873679 - 29873599
Alignment:
Q  5 atgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    ||||||||||||||||| || |||  | ||||||||  ||||||||  |||||| ||||| | ||||||||||||||||||    
T  29873679 atgtcccacatcagatagaaaagtggaggttgaacattttataagtgggaggactcataaactcattgccttaaggttttg 29873599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 36784365 - 36784318
Alignment:
Q  42 cttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    ||||||||||||| ||||||||| ||| ||| ||||||||||||||||    
T  36784365 cttataagtaagatgacccataaaccctttgtcttaaggttttggata 36784318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 3672963 - 3673012
Alignment:
Q  117 aagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaa 166  Q
    ||||||||| ||||| ||||||||||||||||||||| | ||||| ||||    
T  3672963 aagcagtgtcggtccgtttgcggagaaaccagcaacgacaatacatgcaa 3673012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30313190 - 30313274
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| |||| || |||  | ||||||||| |||||||| |||||||||| || | |||||||||||| ||||||    
T  30313190 ttatatgtctcacatcggatagaaaagtggaggttgaacac-ttataagtgagaggacccaaaaactcattgccttaagattttgg 30313274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33953917 - 33953840
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaa 78  Q
    ||||| ||||||||||||||| || |||  | |||||||||  ||||||| ||||||||||||| ||  |||||||||    
T  33953917 ttataagtcccacatcagatagaaaagtggaggttgaacactatataagtgagaggacccataaacctgttgccttaa 33953840  T

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Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37894838 - 37894753
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||   ||| || |||||| | | || ||||||||||||||| ||| |||||  ||||||||||||| ||||||    
T  37894838 ttatatgtcccacattgaatagaaaagtaaaggctaaaaaccttataagtaagaagactcataaatccattgccttaagattttgg 37894753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 6421316 - 6421352
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttga 37  Q
    |||||||||||||||| |||||||||||||| |||||    
T  6421316 ttatatgtcccacatcggataaaagagtaaaggttga 6421352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 4e-31; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15772866 - 15772954
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||    
T  15772866 ttatatgtcccatatcggataaaagagtaaatgttgaacaccttataagtaagaggacccataaactcattgctttaaggttttggata 15772954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 29645048 - 29644963
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  29645048 ttatatgtcccacatcggataaaagagtaaaggttaaacaccttataagtaagaggacccataaacccattgtcttaaggttttgg 29644963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 35946534 - 35946619
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  35946534 ttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataaacccgttgccttaaggttttgg 35946619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 43346937 - 43346852
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  43346937 ttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagagaacccataaactcattgccttaaggttttgg 43346852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 32589716 - 32589800
Alignment:
Q  2 tatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||| |||||||| | |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32589716 tatatgtcccacataagataaaataataaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgg 32589800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 29644727 - 29644642
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| |||||||| ||||||| |||||||||||||    
T  29644727 ttatatgtcccacatcggattaaagagtaaaggttgaacaccttataagtaagagaacccataaacccattgtcttaaggttttgg 29644642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37990785 - 37990700
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  37990785 ttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggactcataaactcattgccttaaggttttgg 37990700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 42342534 - 42342449
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||  |||||| |||||||||||||    
T  42342534 ttatatgtcccacatccgataaaagagtaaaggttcaacaccttataagtaagaggacccataaatccattgtcttaaggttttgg 42342449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 22304582 - 22304666
Alignment:
Q  2 tatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||| ||||||| |||||| |||||| ||||||||||||||||||||||||| | |||||||||||||||||||    
T  22304582 tatatgtcccacatcggataaaatagtaaaggttgaataccttataagtaagaggacccataaacacattgccttaaggttttgg 22304666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 39935101 - 39935017
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||| ||||||    
T  39935101 ttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaagttttg 39935017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 12114708 - 12114623
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||| ||||||||| |||| || |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  12114708 ttatatatcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttgg 12114623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 33803398 - 33803313
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| |||||||||| ||||||||||||||||||||| |||||||| ||||||| ||||    
T  33803398 ttatatgtcccacatcggataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccattgcattaaggtattgg 33803313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 52634688 - 52634772
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| ||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  52634688 ttatatgtcccacatcggataaaacagtaaaggttgaacgccttataagtaaga-gacccataaacccattgccttaaggttttgg 52634772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 3135219 - 3135135
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||| || |||||||| |||| |||| ||||||||||    
T  3135219 ttatatgtcccacatcggataaaatagtaaatgttgaacaccttataagtaaaagaacccataaacccactgccataaggttttg 3135135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 41359904 - 41359826
Alignment:
Q  8 tcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||| || |||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  41359904 tcccacatcggatacaatagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggttttgg 41359826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 15773204 - 15773289
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||  ||||||||||||| |||||||| ||||||||||||||||| ||||| | ||||||||||| |||||||    
T  15773204 ttatatgtcccacatcgaataaaagagtaaaagttgaacatcttataagtaagaggactcataagctcattgccttaaagttttgg 15773289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 39389082 - 39389167
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||| ||||||| |||||| ||||||||||||| || ||||||||||||||| ||||||| |||||||||||||    
T  39389082 ttatatgtcctacatcggataaaatagtaaaggttgaacaccttaaaactaagaggacccataaacccattgtcttaaggttttgg 39389167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 54017962 - 54017877
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| ||||| || |  |||||||||||||||    
T  54017962 ttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaacctaacgccttaaggttttgg 54017877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 8328155 - 8328222
Alignment:
Q  117 aagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttga 184  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  8328155 aagcagtgtcggtccgtttgcggagaaaccagcaacggcgatacaagcaagtaagagcttccgcttga 8328222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 42342234 - 42342151
Alignment:
Q  3 atatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||| ||||||| |||||||||||||||||| ||  |||||||||||||||||| ||||| | |||||||||||||||||||    
T  42342234 atatgttccacatcggataaaagagtaaatgttcaatgccttataagtaagaggactcataaactcattgccttaaggttttgg 42342151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 21832489 - 21832404
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||  |||| || |||||| |||||||||||||||||||||||||| ||||| | ||| |||||||||||||||    
T  21832489 ttatatgtcccacattggatagaaaagtaaaggttgaacaccttataagtaagaggactcataaactcatagccttaaggttttgg 21832404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25739571 - 25739486
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| |||||||| | ||||||||||||||||||||| | |||||| || |||||||||    
T  25739571 ttatatgtcccacatcggataaaatagtaaaagttgaacatcatataagtaagaggacccataaactcattgcttttaggttttgg 25739486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 32463047 - 32462962
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatg-ttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    |||||||||||||||| |||| ||||||||| | ||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||    
T  32463047 ttatatgtcccacatcggatagaagagtaaaaggttgaataccttataagtaagaagactcataaacccattgccttaaggttttg 32462962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37991123 - 37991038
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||  ||||||| |||||| ||||||||||||||||||||||||||| |||| | ||| |||||||||||||||    
T  37991123 ttatatgtctcacattggataaaatagtaaaggttgaacaccttataagtaagaggacctataaactcatcgccttaaggttttgg 37991038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 54018344 - 54018259
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||  |||| ||||||||||||||  ||||||||||||||||||||||||||||||| || |  |||||||||||||||    
T  54018344 ttatatgtcctgcatcggataaaagagtaaagattgaacaccttataagtaagaggacccataaacctaacgccttaaggttttgg 54018259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 31190031 - 31190091
Alignment:
Q  3 atatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccata 63  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||    
T  31190031 atatgtcccacatcggataaaagagtaaaggttgaacaccttataagttagaggacccata 31190091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 39914264 - 39914352
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    ||||||||| |||||||||||||| |||| | |||||||||||||||| ||||||||||||||| || | ||||||||  |||||||||    
T  39914264 ttatatgtctcacatcagataaaacagtagaggttgaacaccttataaataagaggacccataaacctaatgccttaatattttggata 39914352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 42584968 - 42584884
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    |||||||||||||||| |||| |||||||||  |||||||||||||||||||||||| |||||| || |||| |||||| |||||    
T  42584968 ttatatgtcccacatcggatagaagagtaaagattgaacaccttataagtaagaggatccataaaccaattgtcttaagattttg 42584884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 25755406 - 25755469
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataa 64  Q
    ||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||| |||||    
T  25755406 ttatatgtctcacatcagataaaagagtaaaggttgaataccttataagtaagaggactcataa 25755469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 22304094 - 22304013
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    |||||||||||||||||||||||| |||||| ||       |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  22304094 ttatatgtcccacatcagataaaatagtaaaggt-------cttataagtaagcggacccataaacccattgccttaaggttttggata 22304013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 4823667 - 4823752
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||| ||| |||||| ||||||| |||||| ||| ||||||||||||||| |||||||||||| | |||||||||||| ||||||    
T  4823667 ttataagtctcacatcggataaaatagtaaaagttaaacaccttataagtaggaggacccataaactcattgccttaagattttgg 4823752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8327916 - 8328001
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||||||||||||| | |||| | |||||||||||||| |||||||| |  | ||||||||||||||||    
T  8327916 ttatatgtcccacatcggataaaagagtaaaggatgaatatcttataagtaagagaacccataaacgtaatgccttaaggttttgg 8328001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 32462705 - 32462616
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatg-ttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    ||||||||||||||||  || |||||||||| | ||||||||||||||||||||| || |||||| || ||||| |||||||||||||||    
T  32462705 ttatatgtcccacatcgaatgaaagagtaaaaggttgaacaccttataagtaagatgatccataaacctattgctttaaggttttggata 32462616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 45395799 - 45395714
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||| |||||||||  ||||||||||||| ||| ||||| ||||||||||||||| |||||| ||||||| ||||| |||||||    
T  45395799 ttatatatcccacatcgaataaaagagtaaaggttaaacacgttataagtaagaggatccataaacccattgtcttaatgttttgg 45395714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 3135607 - 3135512
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataa-----gtaagaggaccc--ataaccccattgccttaaggttttggata 89  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||| |     ||||||||||||  |||| ||||||||||||||||||| ||||    
T  3135607 ttatatgtcccacctcagataaaagagtaaaagttgaacaccttattatattagtaagaggacccccataaacccattgccttaaggttttagata 3135512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 33175810 - 33175747
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataa 64  Q
    ||||||||| ||||||||||| || |||||| ||||||||||||||||||||||| ||||||||    
T  33175810 ttatatgtctcacatcagatagaaaagtaaaggttgaacaccttataagtaagagaacccataa 33175747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 50612598 - 50612535
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataa 64  Q
    |||||||||||||||| ||||||| ||||||  ||||||||||||||||||||||||| |||||    
T  50612598 ttatatgtcccacatcggataaaatagtaaagattgaacaccttataagtaagaggactcataa 50612535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1634461 - 1634375
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatg-ttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||| || | |||| | || ||||| |||||||||||||||||||||| ||||||| |||||||||||||    
T  1634461 ttatatgtcccacatcggatagaaaaataaaaggttaaacacattataagtaagaggacccataaacccattggcttaaggttttgg 1634375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37726516 - 37726577
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccat 62  Q
    ||||||||| |||||| ||||||| ||||||||||||| |||||||||||||||||| ||||    
T  37726516 ttatatgtctcacatcggataaaatagtaaatgttgaataccttataagtaagaggatccat 37726577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 53118120 - 53118036
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||| ||| ||| |||||||||||||| |||||||||||||||||| ||||||  || || |||||||||||||| ||||||    
T  53118120 ttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtgagaggattca-aaacccattgccttaagattttgg 53118036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 7767460 - 7767380
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggt 81  Q
    |||||||||||||||| |||| || |||||| |||| |||| |||||| ||||||||| ||||| ||||||| ||||||||    
T  7767460 ttatatgtcccacatcggatagaaaagtaaaggttggacactttataactaagaggactcataaacccattgtcttaaggt 7767380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 9240161 - 9240249
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    |||||||| ||||||| |||| |  |||||| | ||||||||||||||||||||||||||||||  ||||| ||||||| ||| |||||    
T  9240161 ttatatgttccacatcggatagagaagtaaaagctgaacaccttataagtaagaggacccataaatccattaccttaagatttcggata 9240249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 33362422 - 33362354
Alignment:
Q  18 gataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||| | |||| |||||| ||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  33362422 gataaaataataaaggttgaataccttataagtaagaggacccataaacccatttccttaagattttgg 33362354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 44160673 - 44160605
Alignment:
Q  18 gataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||| | |||| |||||||||||||||| |||||||| |||||| ||||||| |||||||||||||    
T  44160673 gataaaacaataaaggttgaacaccttataaataagaggatccataaacccattgtcttaaggttttgg 44160605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 45901725 - 45901809
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatg-ttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||||||||||| |||||||||  ||| | ||||||||||||||||||||||||| ||||| | ||| ||||||| |||||    
T  45901725 ttatatgtcccacatcggataaaagaaaaaaaggttgaacaccttataagtaagaggacgcataaactcatggccttaaagtttt 45901809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 11661971 - 11662046
Alignment:
Q  9 cccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||  |||||||||||||| ||||||||||||| |||| ||||| | ||||| || ||||||||||||||||    
T  11661971 cccacattggataaaagagtaaaggttgaacaccttaaaagtgagaggcctcataaaccaattgccttaaggtttt 11662046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 49336829 - 49336764
Alignment:
Q  5 atgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccat 70  Q
    ||||| |||||| |||| || |||||| ||||| |||||||||||||||||||||||||| |||||    
T  49336829 atgtctcacatcggatagaaaagtaaaggttgaccaccttataagtaagaggacccataaacccat 49336764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 51886573 - 51886645
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgc 73  Q
    ||||||||| ||||||  |||||| |||||| |||||||| | ||||||||||||||||||||| | ||||||    
T  51886573 ttatatgtctcacatcgaataaaatagtaaaggttgaacatcatataagtaagaggacccataaactcattgc 51886645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 8328276 - 8328327
Alignment:
Q  133 tttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttga 184  Q
    ||||||||||||||| |||||| |||||||||||||||||||  ||||||||    
T  8328276 tttgcggagaaaccaacaacggtgatacaagcaagtaagagcttccgcttga 8328327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 22303759 - 22303720
Alignment:
Q  47 aagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  22303759 aagtaagaggacccataaacccattgccttaaggttttgg 22303720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3384412 - 3384327
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||  ||||||| |||| | ||| ||||| ||||||| |||||||||||||| |  | |||||||| |||||||    
T  3384412 ttatatgtcccacatatgataaaacagtataggttaaacactttataaggaagaggacccataaacttaatgccttaaagttttgg 3384327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 33803174 - 33803099
Alignment:
Q  90 tgcgcataaagaagtaacgacggtaaaaagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaag 167  Q
    ||||||||||| || |||||| ||| || ||||||| ||||| || |||||||| |||||||||||||||||||||||    
T  33803174 tgcgcataaagcagcaacgacagtacaa-gcagtgtcggtccgtt-gcggagaagccagcaacggcgatacaagcaag 33803099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 53577376 - 53577461
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| ||||||| |||||| |||||||| |||| || |||| ||| |||||| |  ||||||||||||| ||||    
T  53577376 ttatatgtcacacatcggataaaacagtaaaggttgaacatcttaaaaataagtggatccataaacatattgccttaaggtcttgg 53577461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 21832601 - 21832561
Alignment:
Q  134 ttgcggagaaaccagcaacggcgatacaagcaagtaagagc 174  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  21832601 ttgcggagaaaccagcaacgacgatacaagcaagtatgagc 21832561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 39336343 - 39336287
Alignment:
Q  33 gttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    ||||||||| |||||||| |||||| |||||| | |||||| |||||||||||||||    
T  39336343 gttgaacactttataagtgagaggatccataaactcattgctttaaggttttggata 39336287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 46546439 - 46546387
Alignment:
Q  33 gttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    ||||||||| |||||||| |||| | |||||| ||||||||||||||||||||    
T  46546439 gttgaacactttataagttagagaatccataaacccattgccttaaggttttg 46546387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11661547 - 11661602
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagagg 56  Q
    |||||||||||||||| ||||||| |||||  ||| |||| |||||||||||||||    
T  11661547 ttatatgtcccacatcggataaaatagtaacggttaaacatcttataagtaagagg 11661602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22304258 - 22304301
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacacctt 44  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||    
T  22304258 ttatatgtcccacatcggataaaatagtaaaggttgaacacctt 22304301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 25991417 - 25991500
Alignment:
Q  3 atatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||| |||||  ||| |||||| ||||  |||||||| |||| ||| |||| || | ||||||||||||||||    
T  25991417 atatgtcccacatcaaataaacaagttaatgttaaacattttataagtgagagaacctataaacctaatgccttaaggttttgg 25991500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 173
Target Start/End: Complemental strand, 42342327 - 42342296
Alignment:
Q  142 aaaccagcaacggcgatacaagcaagtaagag 173  Q
    ||||||||||||||||||||||||||||||||    
T  42342327 aaaccagcaacggcgatacaagcaagtaagag 42342296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 52634990 - 52635037
Alignment:
Q  39 caccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||||||||||||| | |||||||||||| ||||||    
T  52634990 caccttataaataagaggacccataaactcattgccttaagattttgg 52635037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 3135348 - 3135298
Alignment:
Q  120 cagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaa 170  Q
    |||||| ||||  ||||||||||||||||||||| |||||||| |||||||    
T  3135348 cagtgtcggtctgtttgcggagaaaccagcaacgacgatacaaacaagtaa 3135298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 41359687 - 41359617
Alignment:
Q  90 tgcgcataaagaagtaacgacggtaaaaagcagtgttggtccatttgcggagaaaccagcaacggcgatac 160  Q
    ||||||||||| || |||  ||||| |||||||||| ||||| ||||||||||||| |  |||||||||||    
T  41359687 tgcgcataaagcagcaacagcggtacaaagcagtgtcggtccgtttgcggagaaactatgaacggcgatac 41359617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 47964621 - 47964579
Alignment:
Q  44 tataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||| ||||||||||||| || ||||||||||||||||||    
T  47964621 tataagtgagaggacccataaacctattgccttaaggttttgg 47964579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 43346665 - 43346706
Alignment:
Q  4 tatgtcccacatcagataaaagagtaaatgttgaacacctta 45  Q
    ||||||||||||| ||||||| |||||| |||||||||||||    
T  43346665 tatgtcccacatcggataaaatagtaaaggttgaacacctta 43346706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 12749213 - 12749269
Alignment:
Q  33 gttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    ||||||||| ||||||||  |||||||||||| || ||||| |||||||||| ||||    
T  12749213 gttgaacactttataagtgtgaggacccataaaccaattgcattaaggtttttgata 12749269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 54018084 - 54018024
Alignment:
Q  128 gtccatttgcggagaaaccagcaacggcgatacaagcaagt-aagagcccccgcttgaggg 187  Q
    |||| ||||||||||||||| |||| | ||||||||||||| ||||||  |||||||||||    
T  54018084 gtccgtttgcggagaaaccaacaacagtgatacaagcaagtaaagagcttccgcttgaggg 54018024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 1e-30; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 70420 - 70337
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||    
T  70420 ttatatgtcccacatcggataaaagagtaaatgttgaacatcttataagtaagaggacccataaacccactgccttaaggtttt 70337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3669699 - 3669784
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  3669699 ttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaaggttttgg 3669784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25561962 - 25561877
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  25561962 ttatatgtcccacatcggataaaagagtaaacgttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgg 25561877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30359283 - 30359368
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||    
T  30359283 ttatatgtctcacatcggataaaagagtaaatgttgaacaccttataagcaagaggacccataaacccatagccttaaggttttgg 30359368  T

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Target: chr8; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9309367 - 9309447
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggt 81  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||    
T  9309367 ttatatgtcccacatcggataaaagagtaaatgttgaacaccttataagtaagaggacccttaaactcattgccttaaggt 9309447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 147463 - 147548
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||| || |||||||||| |||||||    
T  147463 ttatatgtcccacatcggataaaagagtaaaggttgaacaccttataaataagaggacccataaacctattgccttaaagttttgg 147548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3038436 - 3038351
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| ||||||||| |||||||||| ||||||||||| |||||||||||||||||||||    
T  3038436 ttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaaaaggacccataaacccattgccttaaggttttgg 3038351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 34835221 - 34835306
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| | ||||||||||| |||||||    
T  34835221 ttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaagttttgg 34835306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 20870718 - 20870631
Alignment:
Q  2 tatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    ||||||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||| |||| ||||||||| |||||||||    
T  20870718 tatatgttccacatcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccactgccttaagattttggata 20870631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1514061 - 1513976
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| |||||  ||||||||||||||    
T  1514061 ttatatatcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccttaaacccataaccttaaggttttgg 1513976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30359621 - 30359706
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||  ||||||| ||||||    
T  30359621 ttatatgtctcacatcagataaaagagtaaaagttgaacaccttataagtaagaggactcataaacccataaccttaagattttgg 30359706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 40518594 - 40518679
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||||||| || |||||| |||||||||||||||| ||||||||||||||| |||| || |||||||||||||    
T  40518594 ttatatgtcccacatcagatagaaaagtaaaggttgaacaccttataaataagaggacccataaacccaatgacttaaggttttgg 40518679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 9308989 - 9309076
Alignment:
Q  1 ttatatgtcc--cacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||  ||||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||||||| ||||||||||    
T  9308989 ttatatgtcctacacatcagataaaagagtaaaagttgaacatgttataagtaagaggacccataaacccattgcctaaaggttttgg 9309076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 9482750 - 9482666
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    |||||||| ||||||  |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  9482750 ttatatgttccacatgggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgcctaaagattttg 9482666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 9483316 - 9483248
Alignment:
Q  18 gataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  9483316 gataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttgg 9483248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 5420663 - 5420746
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||||||||||| |||| || |||||| |||||||| ||||||||||||||||| ||||| |||||||||||||||||||    
T  5420663 ttatatgtcccacatcggatagaatagtaaaggttgaacatcttataagtaagaggactcataaacccattgccttaaggtttt 5420746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3670072 - 3670157
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| ||| ||||||||||||||| |||||||||||| || ||| ||||||||||||||    
T  3670072 ttatatgtcccacatcggataaaatagtaaaggtttaacaccttataagtatgaggacccataaacctatttccttaaggttttgg 3670157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 8918906 - 8918825
Alignment:
Q  5 atgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||||  |||||||| ||||||||| |||||||||||||||||||||| || |||| |||||||||||||    
T  8918906 atgtcccacatcagatagcagagtaaaggttgaacactttataagtaagaggacccataaacctattgacttaaggttttgg 8918825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 45122638 - 45122726
Alignment:
Q  3 atatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggatatg 91  Q
    ||||| ||| |||| ||||||| |||||| |||||||||||||||||||||||||||||||| | ||||| ||||||||||||| ||||    
T  45122638 atatggcccgcatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggtatg 45122726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 105 - 176
Target Start/End: Complemental strand, 9482933 - 9482862
Alignment:
Q  105 aacgacggtaaaaagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagccc 176  Q
    |||||||||| |||||||||| ||||| |||||||||||| || ||||||||||||||||||||||||||||    
T  9482933 aacgacggtacaaagcagtgtcggtccgtttgcggagaaagcatcaacggcgatacaagcaagtaagagccc 9482862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 9483111 - 9483025
Alignment:
Q  90 tgcgcataaagaagtaacgacggtaaaaagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagccc 176  Q
    |||||| |||| || |||| ||||| |||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||||    
T  9483111 tgcgcagaaagcagcaacggcggtacaaagcagtgtcggtccgtttgcggagaaaccatcaacggcgatataagcaagtaagagccc 9483025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 9608757 - 9608847
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggatatg 91  Q
    |||||||||||| ||| |||| || |||||| |||||||||||||||||||||| ||||||||| |||||  |||||||||||||| ||||    
T  9608757 ttatatgtcccatatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccataaacccatcaccttaaggttttgggtatg 9608847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 3037853 - 3037776
Alignment:
Q  2 tatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaag 79  Q
    ||||||| ||||||| ||| ||| ||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||    
T  3037853 tatatgttccacatcggatgaaatagtaaatgttgaacaccttataagtaagaggactcataaacccattgtcttaag 3037776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 18372140 - 18372055
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||| |||||||  |||||| |||||| ||||||||||||||||||||||||| |||||| | |||||| ||||||||||||    
T  18372140 ttatatgtaccacatccaataaaatagtaaaggttgaacaccttataagtaagaggatccataaactcattgctttaaggttttgg 18372055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 25561790 - 25561729
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccat 62  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||    
T  25561790 ttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagagtacccat 25561729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 33113513 - 33113428
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||| ||||||| |||||| |||||||  ||||||||||||||||||||||| | |||||||||||| ||||||    
T  33113513 ttatatgtcctacatcggataaaatagtaaaggttgaacgtcttataagtaagaggacccataaactcattgccttaagattttgg 33113428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 34834888 - 34834973
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||  ||||||| |||||| ||| |||||||||||||||||| ||| ||||| | |||||||||||||||||||    
T  34834888 ttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagatgactcataaactcattgccttaaggttttgg 34834973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 45122056 - 45121971
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||  |||||| |||||| ||||||||| |||||||||||||||| ||||| | |||||||||||| ||||||    
T  45122056 ttatatgtcccacatcgcataaaatagtaaaggttgaacactttataagtaagaggactcataaactcattgccttaagattttgg 45121971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 45122203 - 45122118
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| ||||||| |||||| ||||||||||||||||||||||| |||||||| | ||||  |||||||||||||    
T  45122203 ttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagaacccataaactcattttcttaaggttttgg 45122118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1014017 - 1013941
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgcctta 77  Q
    |||||||| ||||||| ||||||| |||||| |||||||||| |||||||||||||||| |||| ||||||||||||    
T  1014017 ttatatgttccacatcggataaaatagtaaaagttgaacaccctataagtaagaggaccaataaacccattgcctta 1013941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30441093 - 30441182
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacacctta----taagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| | ||||| |||||| |||||||||||||    ||||||||||| ||||||| |||||||||||||||||||||    
T  30441093 ttatatgtcccacatcggctaaaatagtaaaggttgaacaccttaattataagtaagagggcccataaacccattgccttaaggttttgg 30441182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 41972170 - 41972254
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    |||||||||||||||| |||| || |||||| |||||||||||||||||| | ||||||||||| ||||||||| ||| ||||||    
T  41972170 ttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgataggacccataaacccattgccataaagttttg 41972254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 43274925 - 43274841
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    ||||||||  ||||||||||||||||||||| |||||| |  |||||||||||||||||||||| || |||| ||||||||||||    
T  43274925 ttatatgtttcacatcagataaaagagtaaaggttgaatatattataagtaagaggacccataaacctattgtcttaaggttttg 43274841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 41416317 - 41416254
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataa 64  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||    
T  41416317 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataa 41416254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 45121797 - 45121718
Alignment:
Q  6 tgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    ||||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||| || |  ||||||||||||||    
T  45121797 tgtcccacatcggataaaagagtaaaggttgatcaccttataagtaagaggatccataaacctacagccttaaggttttg 45121718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 34835486 - 34835572
Alignment:
Q  1 ttatatgtcccacatca-gataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||| ||  ||||||| |||||| ||| |||||||||||||||||||||||||||| | ||||||||||| |||||||    
T  34835486 ttatatgtcccacgtcccgataaaatagtaaaggtttaacaccttataagtaagaggacccataaactcattgccttaaagttttgg 34835572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 34835752 - 34835838
Alignment:
Q  1 ttatatgtcccacatca-gataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||| ||  ||||||| |||||| ||| |||||||||||||||||||||||||||| | ||||||||||| |||||||    
T  34835752 ttatatgtcccacgtcccgataaaatagtaaaggtttaacaccttataagtaagaggacccataaactcattgccttaaagttttgg 34835838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1014391 - 1014306
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||  ||||||||||||| |||||| |||||||||||||||||||||||||||| ||| | | || |||||| |||||||    
T  1014391 ttatatgtcatacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccgtaaactcgttaccttaaagttttgg 1014306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8794123 - 8794208
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||||| ||||| || | |  |||||||||||||    
T  8794123 ttatatgtctcacatcggataaaagaataaatgttgaacatcttataagtaagaggactcataaacctaatatcttaaggttttgg 8794208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18372845 - 18372785
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggaccca 61  Q
    ||||||||| |||||| ||||||| |||||| |||||||||||||||||||||||||||||    
T  18372845 ttatatgtcacacatcggataaaatagtaaaggttgaacaccttataagtaagaggaccca 18372785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 32305506 - 32305577
Alignment:
Q  18 gataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    ||||||| |||||| |||||||||||||||||||||| |||| |||| |||||| ||||||| |||||||||    
T  32305506 gataaaatagtaaaggttgaacaccttataagtaagaagacctataaacccattaccttaagattttggata 32305577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 40579635 - 40579569
Alignment:
Q  18 gataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||| |  ||||| ||||||||||    
T  40579635 gataaaatagtaaaggttgaacaccttataagtaagaggacccataaacttattgctttaaggtttt 40579569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18373077 - 18373004
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgcc 74  Q
    ||||||||||||| || ||||||| |||||| |||||||||||||||| ||||||||| ||||| | |||||||    
T  18373077 ttatatgtcccacttcggataaaatagtaaaggttgaacaccttataaataagaggactcataaactcattgcc 18373004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37544636 - 37544551
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||| ||| |||||| ||||||| |||||| ||||||||| ||||||| ||||||||||||||  ||||| | ||||||||||||    
T  37544636 ttataagtcgcacatcggataaaatagtaaaggttgaacacattataagaaagaggacccataaatccattactttaaggttttgg 37544551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 40518103 - 40518168
Alignment:
Q  21 aaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||| |||||| ||||||||||||||||||||  |||||||||| |||| ||||||||||||||||    
T  40518103 aaaaaagtaaaggttgaacaccttataagtaaatggacccataaacccaatgccttaaggttttgg 40518168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 9507819 - 9507879
Alignment:
Q  26 agtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||| |||||| ||||||||||||||||||| ||||| |||||| ||||||||||||||    
T  9507819 agtaaaggttgaataccttataagtaagaggactcataaacccattaccttaaggttttgg 9507879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 9609108 - 9609180
Alignment:
Q  12 acatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||||| || |||||| |||||||| ||||||||||||| ||||||||| ||||| ||||||| |||||    
T  9609108 acatcagatagaaaagtaaaggttgaacatcttataagtaagatgacccataaacccatcgccttaatgtttt 9609180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18372402 - 18372342
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggaccca 61  Q
    ||||||||| |||||| ||||||| |||||| |||||||||||||||||||||| ||||||    
T  18372402 ttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaagaccca 18372342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 18380163 - 18380079
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttg 85  Q
    |||||| |||||||||  |||||| |||||| ||||||||||||||||||||| || || |||| |||| | |||||||||||||    
T  18380163 ttatatatcccacatcgaataaaatagtaaaggttgaacaccttataagtaagggggcctataaacccactaccttaaggttttg 18380079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 40518474 - 40518534
Alignment:
Q  127 ggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttgaggg 187  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||  || ||||||||    
T  40518474 ggtccgtttgcggagaaaccagcaacgacgatacaagcaagtaagagcttccacttgaggg 40518534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 3038202 - 3038135
Alignment:
Q  121 agtgttggtccatttgcggagaaaccagcaacggcgatac-aagcaagtaagagcccccgcttgaggg 187  Q
    ||||| ||||| |||| ||||||||||||||||||||||| ||||||||||||||  |||||||||||    
T  3038202 agtgtcggtccgtttgaggagaaaccagcaacggcgatacaaagcaagtaagagcttccgcttgaggg 3038135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 6877002 - 6876923
Alignment:
Q  7 gtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||||| |||||| |||||||||||||||| ||||| ||||||||  | ||||| |||| ||||||||    
T  6877002 gtcccacatcggataaaaaagtaaaggttgaacaccttataaataagatgacccatacactcattgtcttagggttttgg 6876923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 9482856 - 9482810
Alignment:
Q  138 ggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttga 184  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||    
T  9482856 ggagaaaccagcaacggcgatacaagcaagtaagagcttccgcttga 9482810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 20130462 - 20130543
Alignment:
Q  2 tatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||| |||||| |||||||||||||| |||||||||||| ||||||||| || |||||| |||||  ||||| ||||||    
T  20130462 tatatgtctcacatcggataaaagagtaaaagttgaacacctt-taagtaagatgatccataaacccataaccttacggtttt 20130543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 45123018 - 45123101
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| ||| |||||||  ||||||||| ||||||||| || |||  |||||||||||||    
T  45123018 ttatatgtcccacatcggataaaatagtaaaggttaaacacct--taagtaagatgacccataaacctattttcttaaggttttgg 45123101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 174
Target Start/End: Complemental strand, 8919065 - 8918985
Alignment:
Q  93 gcataaagaagtaacgacggtaaaaagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagc 174  Q
    |||||||| || |||||||||| | | |||||| ||||| |||||| ||||| ||||||||||||||||||||||| |||||    
T  8919065 gcataaagtagcaacgacggtacaga-cagtgtcggtccgtttgcgaagaaatcagcaacggcgatacaagcaagttagagc 8918985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 32640673 - 32640593
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||| |||| |||||| |||||||||||||| ||||||||     || ||||||||||| |||| |||||||||||||||||||||    
T  32640673 ttatctgtctcacatcggataaaagagtaaaggttgaaca-----taggtaagaggaccgataaacccattgccttaaggttttgg 32640593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 9620822 - 9620739
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    ||||||||| |||| |||||| || |||| | ||||| ||| |||||||| ||||||||||||| | |||||||||||| ||||    
T  9620822 ttatatgtctcacaacagatagaaaagtagaagttgatcactttataagtgagaggacccataaactcattgccttaagatttt 9620739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 45122902 - 45122952
Alignment:
Q  134 ttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttga 184  Q
    |||| ||||||||||||||| ||||||||||||||||||||  ||||||||    
T  45122902 ttgcagagaaaccagcaacgacgatacaagcaagtaagagcttccgcttga 45122952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 4154812 - 4154727
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||| || |||  | ||||||||| |||||||| | ||||||||||| | |||||||  ||||||||||    
T  4154812 ttatatgtcccacatctgatagaaaagtggaggttgaacactttataagtgaaaggacccataaactcattgccccaaggttttgg 4154727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18372748 - 18372676
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgcc 74  Q
    |||||||| |||  || ||||||| |||||| ||||||||| |||||||||||||||| ||||| |||||||||    
T  18372748 ttatatgttccatttcggataaaatagtaaaggttgaacac-ttataagtaagaggactcataaacccattgcc 18372676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12283885 - 12283972
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    ||||||||||||| |||||||||| ||||||||||||| | |||| |||||| | ||| ||||| | ||  | ||||||||||||||||    
T  12283885 ttatatgtcccacgtcagataaaaaagtaaatgttgaatatcttaaaagtaaaatgacacataaactca-agtcttaaggttttggata 12283972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 147841 - 147880
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaaca 40  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  147841 ttatatgtcccacatctgataaaaaagtaaatgttgaaca 147880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 18373291 - 18373236
Alignment:
Q  26 agtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggt 81  Q
    |||||| |||||||||||||||| |||||||| |||| | ||||||| ||||||||    
T  18373291 agtaaaggttgaacaccttataaataagaggatccattaacccattgtcttaaggt 18373236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 147713 - 147759
Alignment:
Q  117 aagcagtgttggtccatttgcggagaaaccagcaacggcgatacaag 163  Q
    ||||||||| ||||| ||||||||||||||| ||||| |||||||||    
T  147713 aagcagtgtcggtccgtttgcggagaaaccaacaacgacgatacaag 147759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 40991797 - 40991850
Alignment:
Q  33 gttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| | |||||| ||||||||||||| |||| ||||| ||||||||||    
T  40991797 gttgaacacttcataagtgagaggacccataaacccaatgcctcaaggttttgg 40991850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 43398217 - 43398126
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaa---gaggacccataaccccattgccttaaggttttggata 89  Q
    |||||| || || ||| |||| || |||||| |||||||||||||||| |||   ||||||||||||   ||||||||||| ||||||||||    
T  43398217 ttatatatctcatatcggatagaaaagtaaaggttgaacaccttataaataagaggaggacccataaattcattgccttaaagttttggata 43398126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 5915928 - 5915964
Alignment:
Q  50 taagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||| | |||||||||||||||||||    
T  5915928 taagaggacccataaactcattgccttaaggttttgg 5915964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 2e-29; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2741083 - 2741168
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||||||| || |||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  2741083 ttatatgtcccacatcagatagaatagtaaaggttgaataccttataagtaagaggacccataactccattgccttaaggttttgg 2741168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 36572031 - 36572116
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||    
T  36572031 ttatatgtcccacatcgaataaaagagtaaatgttgaacaccttataagtaagaagacccataaatccattgccttaaggttttgg 36572116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 39404410 - 39404495
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| || || |||||||||||||||    
T  39404410 ttatatgtcccacatcagataaaagagtaaaggtggaacaccttataagtaagaggacccataaacctatagccttaaggttttgg 39404495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 52884899 - 52884984
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  52884899 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaggttttgg 52884984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 22183408 - 22183320
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    |||||| ||||||||| |||||||||||||||||||||||  |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  22183408 ttatatatcccacatcggataaaagagtaaatgttgaacaatttataagtaaaaggacccataaacccattgccttaaggttttggata 22183320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 54017739 - 54017656
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    ||||||||||||| |||||||||| |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  54017739 ttatatgtcccacgtcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggtttt 54017656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 54936215 - 54936293
Alignment:
Q  8 tcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  54936215 tcccacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggacccataaacccattgccttaaggttttgg 54936293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1731791 - 1731706
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||||||||||| |||||| |||||||| ||||||| ||||||||||||||| || ||||||||||||||||||    
T  1731791 ttatatgtcccacatcagataaaacagtaaaggttgaacatcttataaataagaggacccataaaccaattgccttaaggttttgg 1731706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3340819 - 3340904
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||| |||||||| |||||||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  3340819 ttatatgtcccgcatcagatgaaagagtaaaggttgagcaccttataagtaagaggacccataaacccactgccttaaggttttgg 3340904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 34646793 - 34646708
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| ||||| | |||||||||||||||||||    
T  34646793 ttatatgtcccacatcggataaaacagtaaatgttgaacaccttataactaagaggactcataaactcattgccttaaggttttgg 34646708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41370369 - 41370454
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  41370369 ttatatgtcccaaatcggataaaatagtaaatgttgaaaaccttataagtaagaggacccataaacccattgccttaaagttttgg 41370454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 50630899 - 50630814
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||| ||||||| |||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  50630899 ttatatgtcctacatcggataaaatagtaaaggttgaacacattataagtaagaggacccataaacccattgccttaaggttttgg 50630814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 54108928 - 54109003
Alignment:
Q  4 tatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaag 79  Q
    ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  54108928 tatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag 54109003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 25483348 - 25483433
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| ||||||| |||||| |||||||| |||||||||||||||| |||||| |||||||||||||||||||||    
T  25483348 ttatatgtctcacatcggataaaatagtaaaggttgaacatcttataagtaagaggatccataaacccattgccttaaggttttgg 25483433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 36629249 - 36629334
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||| || |||||| ||| |||||||||||||||||||||||||||| | |||||||||||||||||||    
T  36629249 ttatatgtcccacatcggatagaaaagtaaaagttaaacaccttataagtaagaggacccataaactcattgccttaaggttttgg 36629334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 39793004 - 39792919
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||| || ||| | |||||||||||||||||||    
T  39793004 ttatatgtcccacatcagatagaaaagtaaatgttgaacaccttataagaaagaggaaccgtaaactcattgccttaaggttttgg 39792919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 49880172 - 49880257
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||   |||||| |||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  49880172 ttatatgtcccacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccactgccttaaggttttgg 49880257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 52884707 - 52884792
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||||||| || | |||| |||||||||||||||||||||    
T  52884707 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagatgatcgataaacccattgccttaaggttttgg 52884792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 55933268 - 55933183
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||| ||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  55933268 ttatatgtcctacatcggataaaatagtaagggttgaacaccttataagtaagaggacccataaacccattgccttaaagttttgg 55933183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 49302916 - 49303003
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataa--gtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||| |||||| |||||| |||||||| |||||||  |||||||||||||||| |||||||||||||||||||||    
T  49302916 ttatatgtcccacatcaaataaaaaagtaaaggttgaacatcttataaaagtaagaggacccataaacccattgccttaaggttttgg 49303003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 54017845 - 54017763
Alignment:
Q  2 tatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    ||||| ||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  54017845 tatatatcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccatattcccattgtcttaaggtttt 54017763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 4955461 - 4955376
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| || ||| ||||||| ||| || |||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  4955461 ttatatgtctcatatcggataaaatagttaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggttttgg 4955376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 10245932 - 10246016
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||    
T  10245932 ttatatgccccacatcggataaaagagtaaaggttgaacaccttataagtaagagga-ccataaacccaaagccttaaggttttgg 10246016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 22028105 - 22028020
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||||||| |  ||| |||||||||||||||||||||||||||||||| |  ||||||||||||||||||    
T  22028105 ttatatgtcccacatcggataaaatacgaaaggttgaacaccttataagtaagaggacccataaacatattgccttaaggttttgg 22028020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 36608805 - 36608720
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||| |||||||||||||| ||||||||||| ||||||||||||| ||||||  |||||| |||||||||||||    
T  36608805 ttatatgtccaacatcggataaaagagtaaaagttgaacacctcataagtaagaggatccataaatccattgtcttaaggttttgg 36608720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 41707608 - 41707523
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||||||||||||| |||||||||| ||||||||| || |||||||| | ||||| |||||||||||||    
T  41707608 ttatatgtcccacatcggataaaagagtaaaggttgaacaccatataagtaaaagaacccataaactcattgtcttaaggttttgg 41707523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 44620365 - 44620450
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||| ||||||| ||||||| |||||| |||||||||||||||| ||||||  ||||||| |||||||||||||||||||||    
T  44620365 ttatatgttccacatcggataaaacagtaaaggttgaacaccttataaataagagagcccataaacccattgccttaaggttttgg 44620450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 50002438 - 50002523
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| |||||||||||||| ||||||||| || |||||||||||||||||||  |||||| |||||||||||||    
T  50002438 ttatatgtctcacatcggataaaagagtaaaggttgaacactttttaagtaagaggacccataaatccattgtcttaaggttttgg 50002523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 2740712 - 2740795
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||||||||||| |||| || |||||| ||||||||||||||||||||||||||| |||| ||||  |||||||||||||    
T  2740712 ttatatgtcccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacctataaacccagagccttaaggtttt 2740795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 4390238 - 4390160
Alignment:
Q  8 tcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| || | | | |||||| ||||||||||||    
T  4390238 tcccacatcagataaaagagtaaaggttgaacaccttataagtaagaggatcctttagcacattgcgttaaggttttgg 4390160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 43174378 - 43174472
Alignment:
Q  90 tgcgcataaagaagtaacgacggtaaaaagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttga 184  Q
    |||||| |||| || |||||||||| |||||||||| ||||  ||||||||||||||| |||||||||||||| |||||||||||  ||||||||    
T  43174378 tgcgcagaaagtagcaacgacggtacaaagcagtgtcggtctgtttgcggagaaaccaacaacggcgatacaaacaagtaagagcttccgcttga 43174472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 45496820 - 45496902
Alignment:
Q  4 tatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||| |||||||  ||||| ||||||||||||||||||||||||||| |||| | ||||| |||||||||||||    
T  45496820 tatgtcccacatcggataaaatcgtaaaggttgaacaccttataagtaagaggacctataaactcattgtcttaaggttttgg 45496902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 18932887 - 18932810
Alignment:
Q  7 gtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||| ||||| ||||||| |||||| |||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  18932887 gtcctacatcggataaaatagtaaaggttgaataccttataaataagaggacccataaacccattgccttaaggtttt 18932810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 20825848 - 20825933
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||| ||||||| |||||||||||||| |||||||||||||||| |||||| |||||||| ||  | |||||||||||||||    
T  20825848 ttatatgttccacatcggataaaagagtaaaggttgaacaccttataaataagagcacccataaacctttagccttaaggttttgg 20825933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20826229 - 20826306
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaa 78  Q
    |||||||||||||||| ||||||| |||||| ||||||||| ||||||||||||| |||||||| ||||| |||||||    
T  20826229 ttatatgtcccacatcggataaaatagtaaaagttgaacacgttataagtaagagaacccataaacccatagccttaa 20826306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 54741322 - 54741234
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    ||||||||| |||||| |||| || |||||| |||||||||||||||||||||||||||||||  |  |||| ||||||||||||||||    
T  54741322 ttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccatacacagattgtcttaaggttttggata 54741234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 20826099 - 20826166
Alignment:
Q  117 aagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttga 184  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||  ||||||||    
T  20826099 aagcagtgttgatccgtttgcggagaaaccagcaacggcgatacaagcaagtaatagcgtccgcttga 20826166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 50459733 - 50459816
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||| ||||||| | |||||||||||| |||||||| ||||||||||||||||| ||||| ||||||  |||||||||||    
T  50459733 ttatatgttccacatcggttaaaagagtaaaggttgaacatcttataagtaagaggactcataaacccattatcttaaggtttt 50459816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 54343145 - 54343086
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggaccc 60  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||    
T  54343145 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggaccc 54343086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 44621017 - 44621099
Alignment:
Q  4 tatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||| |||||||| ||||||| |||||| |||||||||||||||||||||||| | ||||| | ||||| |||||||||||||    
T  44621017 tatgacccacatcggataaaacagtaaaggttgaacaccttataagtaagagggcacataaactcattgtcttaaggttttgg 44621099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 49076592 - 49076510
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttt 83  Q
    |||||||| ||| ||| ||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||| ||||| ||||    
T  49076592 ttatatgtaccatatcggataaaacagtaaaggttgaacaccttataagtaagaggacctataaacccattgtcttaaagttt 49076510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3244595 - 3244510
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| |||| || |||||| |||||||| ||||||||||||||||||||||| | ||||| ||||| |||||||    
T  3244595 ttatatgtctcacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaactcattgtcttaaagttttgg 3244510  T

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Target: chr4; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3341140 - 3341225
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||  |||||||||||||| ||| ||||| |||||||||||||||||||||||  |||||  ||||| ||||||    
T  3341140 ttatatgtcccacattggataaaagagtaaaggttaaacactttataagtaagaggacccataacatcattgttttaagattttgg 3341225  T

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Target: chr4; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3700377 - 3700434
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggac 58  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||    
T  3700377 ttatatgtcctacatcggataaaagagtaaatgttgaacaccttataagtaaaaggac 3700434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10246359 - 10246436
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaa 78  Q
    ||||||||| || ||| |||||||||||||| |||||||| ||||||||| ||||||||||||| ||||| |||||||    
T  10246359 ttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 10246436  T

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Target: chr4; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 51768204 - 51768119
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| | |||  ||| |||||||||||||||||||||||||| ||||||||| ||||| | ||||| |||||||||||||    
T  51768204 ttatatgtcctatatcgaatataagagtaaatgttgaacaccttataaataagaggactcataaactcattgtcttaaggttttgg 51768119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 16888960 - 16888875
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| |||| || |||||| |||||| |||||||||||||||| ||| |||| | ||||| |||| ||||||||    
T  16888960 ttatatgtcccacatcggatagaaaagtaaaggttgaataccttataagtaagagaacctataaactcattgtcttacggttttgg 16888875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 39404030 - 39404115
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||   ||||||||||||| ||||||||| |||||||||||||||| ||||| | ||| || ||||||||||||    
T  39404030 ttatatgtcctacattgaataaaagagtaaaggttgaacactttataagtaagaggactcataaactcatagcattaaggttttgg 39404115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 44620672 - 44620756
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||| ||| ||| |||| | ||||||||| ||||||||||||||||||||||  ||||  ||||||||||||||    
T  44620672 ttatatgtcccacatcggatgaaatagtagaggttgaacactttataagtaagaggacccataa-accataaccttaaggttttgg 44620756  T

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Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 43174518 - 43174582
Alignment:
Q  1 ttatatgtcccacatcagataaaa-gagtaaatgttgaacaccttataagtaagaggacccataa 64  Q
    ||||||| | |||||||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  43174518 ttatatgccacacatcagataaaaagagtaaaggttgaacaccttataagtaagaggacacataa 43174582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 54108551 - 54108634
Alignment:
Q  4 tatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccc-cattgccttaaggttttgg 86  Q
    ||||||||| ||  ||||||| |||||| |||||||||||||||||||| |||||||||||    |||||||||||||||||||    
T  54108551 tatgtcccatataggataaaatagtaaaggttgaacaccttataagtaaaaggacccataaaattcattgccttaaggttttgg 54108634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 54108813 - 54108864
Alignment:
Q  133 tttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttga 184  Q
    |||| |||||||||||||||||||||||||||||||||||||  ||||||||    
T  54108813 tttgtggagaaaccagcaacggcgatacaagcaagtaagagcttccgcttga 54108864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 31691203 - 31691249
Alignment:
Q  40 accttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||    
T  31691203 accttataagtaagaggacccataaactcattgccttaaggttttgg 31691249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 44620308 - 44620362
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagag 55  Q
    |||||||||||||||  ||||||| |||||| |||||||||||||||||||||||    
T  44620308 ttatatgtcccacatgggataaaatagtaaaggttgaacaccttataagtaagag 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 45489475 - 45489421
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagag 55  Q
    ||||||||| |||||| |||||||||||||| |||||||||| ||||||||||||    
T  45489475 ttatatgtctcacatcggataaaagagtaaaggttgaacaccatataagtaagag 45489421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 6975600 - 6975515
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| ||||||| |||||| |||||| | ||||||||||||||||| |||||  |||||  |||||| ||||||    
T  6975600 ttatatgtctcacatccgataaaatagtaaaggttgaatatcttataagtaagaggactcataaatccattatcttaagattttgg 6975515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 22028258 - 22028205
Alignment:
Q  121 agtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagc 174  Q
    ||||| ||||| ||||||||||||||||||||| |||| |||||||||||||||    
T  22028258 agtgtcggtccgtttgcggagaaaccagcaacgacgattcaagcaagtaagagc 22028205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 32941267 - 32941182
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||  ||||| || | || |||||| |||||||||||||||| ||||||| | ||||| | |||||||||||||||||||    
T  32941267 ttatatgtcttacatcggaaagaacagtaaaggttgaacaccttataaataagagggctcataaactcattgccttaaggttttgg 32941182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 3271806 - 3271884
Alignment:
Q  11 cacatcagataaaagagtaaatgttgaacaccttat---aagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||| || |||||| ||| ||||||||||   ||||||||| |||||||| || ||||||||||||||||||    
T  3271806 cacatcagatagaaaagtaaaagttaaacaccttattataagtaagagaacccataaacctattgccttaaggttttgg 3271884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 22028515 - 22028428
Alignment:
Q  1 ttatatgtcccacatcagataaaagag--taaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||| ||||| ||||||| |   |||| |||||||||||||| ||||||||||||||||| | ||||| ||||| |||||||    
T  22028515 ttatatgtcctacatcggataaaaaaaaataaaggttgaacaccttattagtaagaggacccataaactcattgtcttaatgttttgg 22028428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34004727 - 34004641
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    ||||||||| |||||  ||||||| | |||| |||||||| ||||||||||||||||||||||| | |||| |||||||||||| ||||    
T  34004727 ttatatgtcacacatatgataaaa-actaaaggttgaacaacttataagtaagaggacccataaactcatt-ccttaaggttttcgata 34004641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 39404283 - 39404352
Alignment:
Q  117 aagcagtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttgagggaga 190  Q
    ||||||||| ||||| ||||||||||||||| |||||||||||    |||||||||||  ||||||||||||||    
T  39404283 aagcagtgtcggtccgtttgcggagaaaccatcaacggcgata----caagtaagagcttccgcttgagggaga 39404352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 45489605 - 45489542
Alignment:
Q  121 agtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagcccccgcttga 184  Q
    ||||| ||||| ||||||||||| |||||||  |||||||||||||||||||||  ||||||||    
T  45489605 agtgtcggtccgtttgcggagaacccagcaatagcgatacaagcaagtaagagcttccgcttga 45489542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 48111825 - 48111759
Alignment:
Q  18 gataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    |||||||||||||| ||||||||| |||||||||| |||||  ||||  ||||| ||||||||||||    
T  48111825 gataaaagagtaaaggttgaacacattataagtaaaaggacttataaatccattaccttaaggtttt 48111759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 49076955 - 49076890
Alignment:
Q  20 taaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||| |||||| ||||||||||||||| ||||||| |||||||| |||||  ||||||||||||||    
T  49076955 taaaatagtaaaggttgaacaccttata-gtaagagaacccataaacccataaccttaaggttttgg 49076890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 16889680 - 16889595
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| || ||| |||| || |||||| |||||| ||||||||||||||||||  ||||| || | |||||||| |||||||    
T  16889680 ttatatgtctcaaatcggatagaaaagtaaaggttgaataccttataagtaagaggattcataaacctactgccttaaagttttgg 16889595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 2740956 - 2741019
Alignment:
Q  122 gtgttggtccatttgcggagaaaccagcaacggcgatacaagc-aagtaagagcccccgcttga 184  Q
    |||| ||||| ||||| |||||||||||||||||||||| ||| ||||||||||  ||||||||    
T  2740956 gtgtcggtccgtttgcagagaaaccagcaacggcgatacgagcaaagtaagagcttccgcttga 2741019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 18879852 - 18879903
Alignment:
Q  35 tgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||||||| |||| |||| || ||| ||||||||||||||    
T  18879852 tgaacaccttataagtaagatgacctataaacctatttccttaaggttttgg 18879903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 49076722 - 49076671
Alignment:
Q  122 gtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagag 173  Q
    |||| ||||| |||| |||||||||||||||| | |||||||||||||||||    
T  49076722 gtgtcggtccgtttgtggagaaaccagcaacgacaatacaagcaagtaagag 49076671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 44621438 - 44621492
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagag 55  Q
    |||||||||| ||||  ||||||| |||||| ||| |||||||||||||||||||    
T  44621438 ttatatgtccaacatgggataaaacagtaaaggttaaacaccttataagtaagag 44621492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 760201 - 760286
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||||||||||  ||| || | | || |||||  || |||||||| ||||||||||||| | |||||||||||| ||||||    
T  760201 ttatatgtcccacatcgaatagaaaaatgaaggttgagaactttataagtgagaggacccataaactcattgccttaagattttgg 760286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 31691430 - 31691467
Alignment:
Q  133 tttgcggagaaaccagcaacggcgatacaagcaagtaa 170  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  31691430 tttgcagagaaaccagcaacggcgatacaaacaagtaa 31691467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 43827485 - 43827534
Alignment:
Q  34 ttgaacaccttataagtaagaggacccataaccccattgccttaaggttt 83  Q
    |||||| |||||||| |||||||||||||||   ||||||||||||||||    
T  43827485 ttgaactccttataaataagaggacccataaattcattgccttaaggttt 43827534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 44621309 - 44621358
Alignment:
Q  121 agtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaa 170  Q
    ||||| ||||||||||| |||| |||||||||| |||||||| |||||||    
T  44621309 agtgtcggtccatttgcagagacaccagcaacgacgatacaaacaagtaa 44621358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 16889420 - 16889360
Alignment:
Q  128 gtccatttgcggagaaaccagcaacggcgatacaagcaagt-aagagcccccgcttgaggg 187  Q
    |||| |||| |||||||||||||||| |||||||| ||||| ||||||  |||||||||||    
T  16889420 gtccgtttgaggagaaaccagcaacgacgatacaaacaagtaaagagcttccgcttgaggg 16889360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 50788127 - 50788087
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacac 41  Q
    |||||||||||||||| ||||||| |||||| |||||||||    
T  50788127 ttatatgtcccacatcggataaaatagtaaaggttgaacac 50788087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5369 - 5457
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttggata 89  Q
    |||||||| ||||||| |||| || |||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  5369 ttatatgttccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggata 5457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 4994 - 5079
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||||||| |||||| || | || |||||| ||| || | ||||||||||| | ||||||||| | |||||||||| ||||||||    
T  4994 ttatatgtctcacatcggagagaacagtaaaggtttaatatcttataagtaaaaagacccataaactcattgccttatggttttgg 5079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 17602 - 17519
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    ||||||||| |||||||||||||| |||||| |||||||||||| ||||||||||||||||||| ||||| |||||||||||||    
T  17602 ttatatgtcacacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggacccataaacccatagccttaaggtttt 17519  T

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Target: scaffold0734 (Bit Score: 59; Significance: 3e-25; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5789 - 5867
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaag 79  Q
    ||||||||| |||||| ||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  5789 ttatatgtcgcacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag 5867  T

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Target: scaffold0734; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 5408 - 5471
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataa 64  Q
    |||||||||| ||||| ||||||| |||||| |||||||||||||||||||||||| |||||||    
T  5408 ttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagggcccataa 5471  T

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Target: scaffold0391 (Bit Score: 58; Significance: 1e-24; HSPs: 5)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1252 - 1167
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    |||||||||||||||  |||||||||||||| ||||||||||||||||| || ||||| ||||| |||||||||||||||||||||    
T  1252 ttatatgtcccacattggataaaagagtaaaggttgaacaccttataagaaaaaggactcataaacccattgccttaaggttttgg 1167  T

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Target: scaffold0391; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 1381 - 1328
Alignment:
Q  121 agtgttggtccatttgcggagaaaccagcaacggcgatacaagcaagtaagagc 174  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  1381 agtgtcggtccgtttgcggagaaaccagcaacgacgatacaagcaagtaagagc 1328  T

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Target: scaffold0391; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 1802 - 1754
Alignment:
Q  36 gaacaccttataagtaagaggacccataaccccattgccttaaggtttt 84  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  1802 gaacaccttataagtgagaggacccataaacccattgccttaaggtttt 1754  T

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Target: scaffold0391; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 3131 - 3092
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaaca 40  Q
    |||||||||||||||| |||||||||||||| ||||||||    
T  3131 ttatatgtcccacatcggataaaagagtaaaggttgaaca 3092  T

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Target: scaffold0391; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 1575 - 1524
Alignment:
Q  121 agtgttggtccatttgcggagaaaccagcaacg--gcgatacaagcaagtaa 170  Q
    ||||| ||||| |||||||||||||||||||||  | |||||||||||||||    
T  1575 agtgtaggtccgtttgcggagaaaccagcaacgttgtgatacaagcaagtaa 1524  T

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Target: scaffold0027 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 47376 - 47457
Alignment:
Q  5 atgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaccccattgccttaaggttttgg 86  Q
    ||||| |||||| ||||||| ||||||  |||||||||||||||||||||| | |||||| ||||||||||||| |||||||    
T  47376 atgtctcacatccgataaaatagtaaagtttgaacaccttataagtaagagaatccataaacccattgccttaaagttttgg 47457  T

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Target: scaffold0504 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 10257 - 10194
Alignment:
Q  1 ttatatgtcccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataa 64  Q
    ||||||||| |||||| |||||||  ||||| ||||||||||||||||||||||||||||||||    
T  10257 ttatatgtctcacatcggataaaatggtaaaagttgaacaccttataagtaagaggacccataa 10194  T

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