View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13547_low_14 (Length: 368)
Name: NF13547_low_14
Description: NF13547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13547_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 33 - 352
Target Start/End: Original strand, 9661651 - 9661971
Alignment:
| Q |
33 |
agactaaattttgatgatgacaagatgaataactaaagaacccaataacacaaagagttaatattacaaacc-aaaaagagatcaagaacgaaggttgga |
131 |
Q |
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| T |
9661651 |
agactaaattttgatgatgacaagatgaataactaaagaacccaagaacacaaagagttaatattacaaaccgaaaaagagatcaagaacgaaggttgga |
9661750 |
T |
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| Q |
132 |
ttttgaaggaagagaagtggtgggaccctcaaaaggaagatgagaaacaggcttagtaaccatgagaggaagatcatcgttgttgttatcatcttcaatg |
231 |
Q |
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| T |
9661751 |
ttttgaaggaagagaagtggtgggaccctcaaaaggaagatgagaaacaggggtagtaaccatgagaggaagatcatcgttgttgttatcatcttcaatg |
9661850 |
T |
|
| Q |
232 |
tcagtggtggtaaggttgatgcaagaacaacgttccaaggaagcaaagaaagcagaagccacgttggtgccgacccagttggcaactctgtcaagtttgt |
331 |
Q |
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| T |
9661851 |
tcagtggtggtaaggttgatgcaagaacaacgttccaaggaagcaaagaaagcagaagccacgttggtgccgacccagttggcaactctgtcaagtttgt |
9661950 |
T |
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| Q |
332 |
cgcatgatatcaacccacatg |
352 |
Q |
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| T |
9661951 |
cgcatgatatcaacccacatg |
9661971 |
T |
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