View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13547_low_15 (Length: 352)
Name: NF13547_low_15
Description: NF13547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13547_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 16 - 331
Target Start/End: Original strand, 12270851 - 12271164
Alignment:
| Q |
16 |
atgcgaaaatcccaagaagctttagtagctatttttcctagcattgctttaagaacaatcaaataacctataaaattatacttgttttaattcttgggat |
115 |
Q |
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| T |
12270851 |
atgcgaaaatcccaagaagctttagtagctatttttcctagcattgctttaagaacaatcaaataacctataaaattatacttgttttaattcttgggat |
12270950 |
T |
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| Q |
116 |
catttactgattttaatatttttaaaaaattagttaaccgattttcattacaagtgttagcctacggtcttttgagaagcgcgtggaacaataacataag |
215 |
Q |
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| T |
12270951 |
catttactgattttaatatttttaaaaaattagttaaccgattttcattacaagtgttagcctacggtcttttgagaagcgcgtggaacaataacataag |
12271050 |
T |
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| Q |
216 |
cagaatagtaatttttccatattagagttttttgtttgagggatccatattagagttgttaaacaggtttgtctatgttgatagtagttgtcttggctcc |
315 |
Q |
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| T |
12271051 |
cagaatagtaatttttccatattagag--ctttgtttgagggatccatattagagttgttaaacaggtttgtctatgttgatggtagttgtcttggctcc |
12271148 |
T |
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| Q |
316 |
ccgacaagagctggct |
331 |
Q |
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|||||||||||||||| |
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| T |
12271149 |
ccgacaagagctggct |
12271164 |
T |
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