View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13547_low_23 (Length: 238)
Name: NF13547_low_23
Description: NF13547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13547_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 37158265 - 37158058
Alignment:
| Q |
18 |
aggtacatcctttgaaattatatttgattattattttgtagaagagaaagcataattcttgatgacataaagattacatttgacaaattattgttgggtg |
117 |
Q |
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| T |
37158265 |
aggtacatcctttgaaattatatttgattattattttgtagaagagaaagcataattcttgatgacataaagattacatttgacaaattattgttgggtg |
37158166 |
T |
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| Q |
118 |
ctttttgaacattaagtgcaatgtactaatggacaccatattttcttctcacaactttaattaatccagctttgtggaatttgagtacataatactcaac |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37158165 |
ctttttgaacattaagtgcaatgtactaatggacaccatattttcttctcacaactttaattaatccagctttgtggaatttgagtacataatactcaac |
37158066 |
T |
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| Q |
218 |
cgtttgta |
225 |
Q |
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|||||||| |
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| T |
37158065 |
cgtttgta |
37158058 |
T |
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