View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13548_low_8 (Length: 239)
Name: NF13548_low_8
Description: NF13548
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13548_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 42029574 - 42029356
Alignment:
| Q |
1 |
attgttggaaggtgcaatggggttcaacctactcatcaagcagcagttgcaacctagactgctagagctggtcaccttttacaaagaagagaaagcagat |
100 |
Q |
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| T |
42029574 |
attgttggaaggtgcaatggggttcaacctactcatcaagcagcagttgcaatctagactgctagagctggtcaccttttacaaagaagagaaagcagat |
42029475 |
T |
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| Q |
101 |
atgattatgaatctagtcacttgattagttttatcaaattactacttaaaagtctaattattggatggaaagaaaaactaaattttaatcttaatatcag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
42029474 |
atgattatgaatctagtcacttgattagttttatcaaattactacttaaaagtctaataattggatggaaagaaaaactaaattttaatcttaatatcag |
42029375 |
T |
|
| Q |
201 |
gttcatgaaattgtaagat |
219 |
Q |
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||||||||||||||||||| |
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| T |
42029374 |
gttcatgaaattgtaagat |
42029356 |
T |
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