View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13551_low_7 (Length: 219)
Name: NF13551_low_7
Description: NF13551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13551_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 182; Significance: 1e-98; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 37903096 - 37903313
Alignment:
| Q |
1 |
ctacacgtatttgaagatccttttacccagtgcgcataagatatcaaatgtgtttcagtacctgcaaaagaggaattgatagaataatcaaaaccaataa |
100 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37903096 |
ctacacgtatttgaagatccttttccccagtgcgcataagatataacatgtgtttcagtacctgcaaaagaggaattgatagaataatcaaaaccaataa |
37903195 |
T |
|
| Q |
101 |
tgtaagcaacagtacaaggattgagtaggctgataatttgggagaaaacttactcgcccttgcatcttctcttccaatctttttatagtctttgttcctc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | | |
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| T |
37903196 |
tgtaagcaacagtacaaggattgagtaggctgataatttgggagaaaacttactcgcccttgcatcttctcttccaatctttttaacgtctttgttacac |
37903295 |
T |
|
| Q |
201 |
cctcttgagaaggctgca |
218 |
Q |
| |
|
|||||||| |||||||| |
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| T |
37903296 |
actcttgagtaggctgca |
37903313 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 37909607 - 37909824
Alignment:
| Q |
1 |
ctacacgtatttgaagatccttttacccagtgcgcataagatatcaaatgtgtttcagtacctgcaaaagaggaattgatagaataatcaaaaccaataa |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37909607 |
ctacacgtatttgaagatccttttccccagtgcgcataagatataacatgtgtttcagtacctgcaaaagaggaattgatagaataatcaaaaccaataa |
37909706 |
T |
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| Q |
101 |
tgtaagcaacagtacaaggattgagtaggctgataatttgggagaaaacttactcgcccttgcatcttctcttccaatctttttatagtctttgttcctc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | | |
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| T |
37909707 |
tgtaagcaacagtacaaggattgagtaggctgataatttgggagaaaacttactcgcccttgcatcttctcttccaatctttttaacgtctttgttacac |
37909806 |
T |
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| Q |
201 |
cctcttgagaaggctgca |
218 |
Q |
| |
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|||||||| |||||||| |
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| T |
37909807 |
actcttgagtaggctgca |
37909824 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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