View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13553_low_1 (Length: 630)

Name: NF13553_low_1
Description: NF13553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13553_low_1
NF13553_low_1
[»] chr3 (68 HSPs)
chr3 (18-261)||(34058513-34058756)
chr3 (476-620)||(53190759-53190903)
chr3 (475-623)||(21348722-21348870)
chr3 (475-620)||(27899081-27899226)
chr3 (474-610)||(54898435-54898571)
chr3 (495-620)||(35905712-35905837)
chr3 (478-623)||(43765139-43765284)
chr3 (474-623)||(51684608-51684757)
chr3 (476-620)||(2226152-2226296)
chr3 (476-623)||(30599915-30600062)
chr3 (476-620)||(41977750-41977894)
chr3 (476-623)||(23293167-23293314)
chr3 (508-623)||(46197752-46197867)
chr3 (476-623)||(17515310-17515457)
chr3 (479-623)||(42279510-42279654)
chr3 (476-620)||(46112487-46112631)
chr3 (476-623)||(3152215-3152362)
chr3 (498-620)||(2377051-2377173)
chr3 (475-623)||(44794207-44794354)
chr3 (494-602)||(2660230-2660338)
chr3 (322-386)||(34058389-34058453)
chr3 (474-565)||(53187740-53187831)
chr3 (554-620)||(7884873-7884939)
chr3 (475-565)||(30598336-30598426)
chr3 (540-623)||(48830803-48830886)
chr3 (476-565)||(3150252-3150341)
chr3 (476-565)||(23291570-23291659)
chr3 (479-565)||(42282473-42282559)
chr3 (467-565)||(46308798-46308896)
chr3 (475-565)||(53094273-53094363)
chr3 (476-565)||(38193510-38193599)
chr3 (476-565)||(41979352-41979441)
chr3 (550-623)||(44276193-44276266)
chr3 (476-565)||(46310436-46310525)
chr3 (477-565)||(2378983-2379071)
chr3 (525-623)||(19987591-19987689)
chr3 (475-565)||(44267980-44268070)
chr3 (476-565)||(611222-611311)
chr3 (494-583)||(23774170-23774259)
chr3 (476-565)||(46611303-46611392)
chr3 (494-599)||(48633895-48634000)
chr3 (476-565)||(54900074-54900163)
chr3 (474-565)||(46609147-46609238)
chr3 (484-565)||(17516973-17517054)
chr3 (476-565)||(35903825-35903914)
chr3 (476-565)||(38191895-38191984)
chr3 (476-557)||(48829356-48829437)
chr3 (476-557)||(51686402-51686483)
chr3 (475-565)||(46114105-46114196)
chr3 (494-565)||(54412547-54412618)
chr3 (474-564)||(35572525-35572615)
chr3 (476-565)||(28626411-28626500)
chr3 (476-565)||(44795890-44795979)
chr3 (494-610)||(40508901-40509017)
chr3 (486-565)||(48635375-48635454)
chr3 (494-600)||(23888772-23888878)
chr3 (513-591)||(41021012-41021090)
chr3 (525-599)||(45898349-45898423)
chr3 (476-537)||(7884927-7884988)
chr3 (494-599)||(31887453-31887558)
chr3 (476-565)||(53092623-53092712)
chr3 (572-620)||(600805-600853)
chr3 (481-565)||(2661908-2661992)
chr3 (469-556)||(600718-600805)
chr3 (494-589)||(2977340-2977435)
chr3 (532-599)||(24382894-24382961)
chr3 (526-596)||(33113184-33113254)
chr3 (515-591)||(33852679-33852755)
[»] chr5 (40 HSPs)
chr5 (476-623)||(36057590-36057737)
chr5 (474-620)||(17574316-17574462)
chr5 (476-620)||(2179787-2179931)
chr5 (476-620)||(7267843-7267987)
chr5 (476-620)||(30468260-30468404)
chr5 (476-623)||(34327635-34327782)
chr5 (474-623)||(18624985-18625134)
chr5 (475-619)||(8539674-8539818)
chr5 (476-623)||(2854304-2854450)
chr5 (476-565)||(30463900-30463989)
chr5 (475-582)||(24541230-24541337)
chr5 (474-565)||(12738736-12738827)
chr5 (474-565)||(12801559-12801650)
chr5 (476-623)||(29621758-29621905)
chr5 (476-565)||(8541271-8541360)
chr5 (494-623)||(40780568-40780697)
chr5 (476-623)||(42473584-42473731)
chr5 (476-565)||(2852886-2852975)
chr5 (476-565)||(21842992-21843081)
chr5 (476-565)||(34328827-34328916)
chr5 (469-565)||(32134224-32134320)
chr5 (488-612)||(24496755-24496879)
chr5 (475-565)||(7269446-7269536)
chr5 (494-600)||(15459189-15459295)
chr5 (474-565)||(28813765-28813858)
chr5 (479-565)||(28822090-28822176)
chr5 (475-565)||(40782211-40782301)
chr5 (501-567)||(43492131-43492197)
chr5 (513-598)||(38178095-38178180)
chr5 (513-598)||(38205319-38205404)
chr5 (479-563)||(41493847-41493931)
chr5 (525-599)||(18728603-18728677)
chr5 (525-599)||(32087563-32087637)
chr5 (476-565)||(29620138-29620227)
chr5 (499-599)||(35395356-35395456)
chr5 (526-599)||(43318061-43318134)
chr5 (513-588)||(38596905-38596980)
chr5 (540-610)||(35292372-35292442)
chr5 (532-601)||(27349212-27349281)
chr5 (513-565)||(32835913-32835965)
[»] chr8 (55 HSPs)
chr8 (476-623)||(13282478-13282625)
chr8 (474-620)||(8609787-8609933)
chr8 (474-623)||(26242311-26242460)
chr8 (494-623)||(41042581-41042710)
chr8 (474-623)||(13486096-13486245)
chr8 (475-620)||(38547227-38547372)
chr8 (479-623)||(42941777-42941921)
chr8 (474-623)||(41825641-41825790)
chr8 (476-620)||(13108336-13108480)
chr8 (476-623)||(7745109-7745256)
chr8 (476-623)||(22272334-22272483)
chr8 (477-600)||(5036446-5036569)
chr8 (476-623)||(27691154-27691301)
chr8 (519-623)||(9673162-9673266)
chr8 (476-623)||(33708801-33708947)
chr8 (529-623)||(40339677-40339771)
chr8 (476-565)||(42943426-42943515)
chr8 (494-623)||(15305815-15305944)
chr8 (494-623)||(15486184-15486313)
chr8 (476-565)||(22273891-22273980)
chr8 (476-557)||(34681074-34681155)
chr8 (474-565)||(35509212-35509303)
chr8 (476-557)||(26238726-26238807)
chr8 (475-565)||(29237150-29237240)
chr8 (476-565)||(35510819-35510908)
chr8 (477-565)||(33707207-33707295)
chr8 (474-565)||(5038062-5038152)
chr8 (475-565)||(33762713-33762803)
chr8 (475-565)||(38548831-38548921)
chr8 (476-565)||(601704-601793)
chr8 (476-565)||(27692837-27692926)
chr8 (474-565)||(13106802-13106893)
chr8 (476-565)||(8608237-8608327)
chr8 (475-565)||(33761068-33761158)
chr8 (476-565)||(29239187-29239276)
chr8 (494-599)||(31821436-31821541)
chr8 (494-565)||(9671995-9672066)
chr8 (494-565)||(13283995-13284066)
chr8 (476-623)||(27406894-27407041)
chr8 (474-557)||(43262145-43262228)
chr8 (475-565)||(15308261-15308351)
chr8 (475-565)||(15488630-15488720)
chr8 (513-599)||(42897775-42897861)
chr8 (476-565)||(13484545-13484634)
chr8 (486-591)||(31201152-31201257)
chr8 (494-599)||(37526024-37526129)
chr8 (476-557)||(41823890-41823971)
chr8 (486-600)||(9184393-9184507)
chr8 (494-591)||(33160157-33160254)
chr8 (512-599)||(33750385-33750472)
chr8 (491-565)||(3151972-3152046)
chr8 (513-599)||(8654537-8654622)
chr8 (494-599)||(38882798-38882903)
chr8 (486-602)||(28433714-28433830)
chr8 (513-565)||(31199522-31199574)
[»] chr1 (51 HSPs)
chr1 (476-623)||(2869579-2869726)
chr1 (474-620)||(31238475-31238621)
chr1 (474-620)||(25278348-25278494)
chr1 (474-623)||(27087281-27087430)
chr1 (474-620)||(4855946-4856092)
chr1 (476-620)||(37344342-37344486)
chr1 (475-623)||(46583533-46583681)
chr1 (475-620)||(6818658-6818803)
chr1 (476-620)||(34778118-34778262)
chr1 (466-619)||(50556078-50556231)
chr1 (494-623)||(51896129-51896258)
chr1 (475-623)||(3013447-3013601)
chr1 (479-623)||(33602621-33602765)
chr1 (518-623)||(15104483-15104588)
chr1 (475-578)||(25278975-25279078)
chr1 (474-565)||(31236817-31236908)
chr1 (476-623)||(9121645-9121792)
chr1 (479-623)||(52643597-52643736)
chr1 (474-565)||(26223585-26223676)
chr1 (476-623)||(47013059-47013206)
chr1 (474-556)||(25278852-25278934)
chr1 (476-565)||(46582010-46582099)
chr1 (477-565)||(50554164-50554252)
chr1 (471-565)||(4854405-4854499)
chr1 (476-557)||(52641888-52641969)
chr1 (474-565)||(9120037-9120128)
chr1 (479-565)||(3011858-3011944)
chr1 (479-565)||(51894570-51894656)
chr1 (476-565)||(34776569-34776658)
chr1 (486-599)||(36895511-36895624)
chr1 (476-563)||(8167942-8168029)
chr1 (474-565)||(25276740-25276831)
chr1 (477-538)||(6816866-6816927)
chr1 (476-565)||(8169568-8169657)
chr1 (486-591)||(27940618-27940723)
chr1 (476-565)||(37345962-37346051)
chr1 (474-565)||(27089279-27089370)
chr1 (494-565)||(33599236-33599307)
chr1 (475-557)||(37088144-37088226)
chr1 (476-565)||(2871076-2871165)
chr1 (526-599)||(42134532-42134605)
chr1 (476-565)||(47011456-47011545)
chr1 (476-544)||(33599187-33599255)
chr1 (474-536)||(45044947-45045009)
chr1 (532-602)||(51121961-51122031)
chr1 (476-565)||(1444181-1444270)
chr1 (526-593)||(18183950-18184017)
chr1 (549-623)||(1442594-1442668)
chr1 (513-599)||(31801670-31801756)
chr1 (494-538)||(1442568-1442612)
chr1 (515-599)||(45380985-45381069)
[»] chr6 (35 HSPs)
chr6 (477-623)||(20523367-20523513)
chr6 (475-623)||(6899484-6899632)
chr6 (475-620)||(32439071-32439216)
chr6 (475-623)||(10568398-10568546)
chr6 (475-623)||(13613559-13613707)
chr6 (498-623)||(7372935-7373060)
chr6 (474-620)||(32516875-32517021)
chr6 (477-620)||(11355223-11355366)
chr6 (529-623)||(9398713-9398807)
chr6 (494-623)||(14338452-14338581)
chr6 (494-621)||(3456766-3456893)
chr6 (476-623)||(32455868-32456015)
chr6 (476-565)||(11357194-11357283)
chr6 (554-623)||(7049835-7049904)
chr6 (474-565)||(7371173-7371264)
chr6 (476-557)||(6902906-6902986)
chr6 (476-565)||(9400035-9400124)
chr6 (476-565)||(32518497-32518586)
chr6 (475-557)||(13610689-13610771)
chr6 (476-557)||(10569927-10570008)
chr6 (475-565)||(3480657-3480747)
chr6 (475-565)||(32454247-32454337)
chr6 (486-591)||(4641365-4641470)
chr6 (498-555)||(7051255-7051312)
chr6 (476-565)||(18645104-18645192)
chr6 (476-565)||(20525334-20525423)
chr6 (476-544)||(32437140-32437208)
chr6 (518-589)||(2968181-2968252)
chr6 (525-591)||(3018441-3018507)
chr6 (476-538)||(8605352-8605414)
chr6 (479-557)||(21068628-21068706)
chr6 (513-591)||(29077365-29077443)
chr6 (513-591)||(29112337-29112415)
chr6 (494-554)||(33276819-33276879)
chr6 (495-537)||(7049805-7049847)
[»] chr2 (44 HSPs)
chr2 (474-623)||(40560221-40560370)
chr2 (475-623)||(39664745-39664893)
chr2 (475-601)||(16763075-16763201)
chr2 (476-620)||(19908246-19908391)
chr2 (475-623)||(2766933-2767081)
chr2 (475-623)||(14389081-14389229)
chr2 (474-621)||(44709744-44709891)
chr2 (479-623)||(17696209-17696353)
chr2 (480-623)||(42519202-42519346)
chr2 (475-623)||(39455168-39455316)
chr2 (512-620)||(16377197-16377305)
chr2 (498-623)||(6797529-6797654)
chr2 (475-623)||(37020507-37020655)
chr2 (474-565)||(16376734-16376825)
chr2 (475-601)||(6786000-6786126)
chr2 (495-601)||(24208061-24208167)
chr2 (476-565)||(39663154-39663243)
chr2 (494-558)||(19906700-19906764)
chr2 (494-623)||(37645505-37645634)
chr2 (474-565)||(16764611-16764702)
chr2 (476-582)||(19581414-19581520)
chr2 (476-565)||(14387349-14387438)
chr2 (476-565)||(34400314-34400403)
chr2 (494-599)||(37417291-37417396)
chr2 (476-565)||(39456780-39456869)
chr2 (474-566)||(31475079-31475171)
chr2 (476-565)||(24205598-24205687)
chr2 (486-599)||(29909661-29909774)
chr2 (475-565)||(2577480-2577570)
chr2 (475-565)||(6783363-6783453)
chr2 (513-599)||(15432365-15432451)
chr2 (475-565)||(37022185-37022275)
chr2 (497-566)||(37646477-37646546)
chr2 (476-565)||(40561878-40561967)
chr2 (474-566)||(162074-162165)
chr2 (494-565)||(6799408-6799479)
chr2 (532-610)||(7744099-7744177)
chr2 (532-610)||(17946150-17946228)
chr2 (513-591)||(41706576-41706654)
chr2 (552-605)||(11315330-11315383)
chr2 (486-591)||(15372509-15372614)
chr2 (540-610)||(39387-39457)
chr2 (513-599)||(39593-39679)
chr2 (513-610)||(42879393-42879489)
[»] chr7 (56 HSPs)
chr7 (476-620)||(39859209-39859353)
chr7 (479-623)||(24228386-24228530)
chr7 (476-623)||(38474120-38474267)
chr7 (476-620)||(45359336-45359480)
chr7 (476-623)||(37115503-37115650)
chr7 (496-620)||(6602355-6602479)
chr7 (475-623)||(47386186-47386334)
chr7 (476-623)||(30940402-30940549)
chr7 (476-620)||(29996494-29996638)
chr7 (498-620)||(13168142-13168267)
chr7 (479-610)||(37796171-37796302)
chr7 (474-620)||(34776895-34777041)
chr7 (474-623)||(27666042-27666191)
chr7 (475-565)||(13169683-13169773)
chr7 (476-581)||(56330-56435)
chr7 (517-623)||(35693347-35693455)
chr7 (467-623)||(20478033-20478189)
chr7 (474-565)||(6605397-6605488)
chr7 (474-565)||(39857643-39857734)
chr7 (467-565)||(35403619-35403717)
chr7 (476-565)||(37113941-37114030)
chr7 (532-623)||(48852324-48852415)
chr7 (476-565)||(23904583-23904672)
chr7 (494-566)||(13039641-13039713)
chr7 (477-565)||(24226582-24226670)
chr7 (474-565)||(22155847-22155938)
chr7 (474-565)||(22211762-22211853)
chr7 (513-599)||(33038798-33038884)
chr7 (479-565)||(48227941-48228027)
chr7 (480-565)||(35691431-35691516)
chr7 (475-565)||(20479719-20479809)
chr7 (554-620)||(23906241-23906307)
chr7 (479-565)||(27664433-27664519)
chr7 (476-565)||(35401969-35402058)
chr7 (476-553)||(38549547-38549624)
chr7 (476-565)||(46437107-46437196)
chr7 (476-565)||(47384294-47384383)
chr7 (513-599)||(2167516-2167602)
chr7 (476-565)||(78014-78103)
chr7 (476-565)||(34774998-34775087)
chr7 (495-599)||(13018052-13018158)
chr7 (532-610)||(1546343-1546421)
chr7 (525-599)||(46996703-46996777)
chr7 (518-591)||(8423290-8423363)
chr7 (518-591)||(35344299-35344372)
chr7 (511-599)||(366733-366821)
chr7 (474-562)||(45361279-45361367)
chr7 (477-536)||(29994907-29994966)
chr7 (476-559)||(46439539-46439622)
chr7 (494-565)||(46810723-46810794)
chr7 (499-565)||(36756885-36756951)
chr7 (499-565)||(36766409-36766475)
chr7 (494-588)||(46812594-46812688)
chr7 (476-537)||(23906295-23906356)
chr7 (554-598)||(31915040-31915084)
chr7 (486-610)||(45463680-45463804)
[»] chr4 (48 HSPs)
chr4 (479-623)||(41761723-41761867)
chr4 (475-623)||(41781538-41781686)
chr4 (477-623)||(49523125-49523271)
chr4 (476-623)||(48813787-48813934)
chr4 (476-620)||(51011926-51012070)
chr4 (474-620)||(52868129-52868275)
chr4 (474-623)||(42980627-42980782)
chr4 (476-623)||(43519424-43519571)
chr4 (495-623)||(48646724-48646852)
chr4 (497-620)||(35404425-35404548)
chr4 (472-565)||(35401745-35401838)
chr4 (475-565)||(49524733-49524823)
chr4 (479-565)||(39345567-39345653)
chr4 (476-557)||(48645255-48645336)
chr4 (467-565)||(4173740-4173838)
chr4 (497-591)||(11601692-11601785)
chr4 (475-565)||(43507166-43507256)
chr4 (476-565)||(319273-319362)
chr4 (476-565)||(43508653-43508742)
chr4 (486-591)||(44794769-44794874)
chr4 (479-623)||(2693230-2693373)
chr4 (472-566)||(20819981-20820075)
chr4 (475-565)||(51013886-51013976)
chr4 (476-565)||(33264382-33264471)
chr4 (473-565)||(42982452-42982544)
chr4 (475-565)||(20493826-20493916)
chr4 (513-599)||(35996100-35996186)
chr4 (476-565)||(4169686-4169775)
chr4 (513-591)||(10372715-10372793)
chr4 (513-591)||(47941848-47941926)
chr4 (497-566)||(2691394-2691463)
chr4 (494-599)||(44558494-44558599)
chr4 (475-562)||(320903-320990)
chr4 (474-565)||(833221-833312)
chr4 (525-599)||(2827453-2827527)
chr4 (475-565)||(5439647-5439737)
chr4 (513-591)||(10762618-10762696)
chr4 (476-565)||(33266010-33266099)
chr4 (495-599)||(7149558-7149662)
chr4 (481-565)||(43521109-43521193)
chr4 (513-565)||(44556657-44556709)
chr4 (494-557)||(54387890-54387952)
chr4 (475-565)||(835042-835132)
chr4 (475-565)||(5437810-5437900)
chr4 (475-565)||(11254118-11254208)
chr4 (552-600)||(13450980-13451028)
chr4 (540-588)||(27624870-27624918)
chr4 (486-610)||(39083649-39083773)
[»] scaffold1454 (1 HSPs)
scaffold1454 (494-620)||(1281-1407)
[»] scaffold0058 (3 HSPs)
scaffold0058 (474-623)||(3292-3441)
scaffold0058 (474-623)||(4464-4613)
scaffold0058 (474-565)||(14343-14434)
[»] scaffold0564 (1 HSPs)
scaffold0564 (478-620)||(8264-8404)
[»] scaffold0345 (1 HSPs)
scaffold0345 (476-565)||(1555-1644)
[»] scaffold0081 (1 HSPs)
scaffold0081 (475-565)||(54258-54348)
[»] scaffold0477 (1 HSPs)
scaffold0477 (486-591)||(6643-6748)
[»] scaffold1712 (1 HSPs)
scaffold1712 (474-565)||(980-1071)
[»] scaffold0024 (1 HSPs)
scaffold0024 (554-621)||(37282-37349)


Alignment Details
Target: chr3 (Bit Score: 236; Significance: 1e-130; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 18 - 261
Target Start/End: Complemental strand, 34058756 - 34058513
Alignment:
Q  18 gaaagctagctagctatacaagagtctcagctaacttccatgatgttgtgtgaagagataacagtttttactaaagatagagaaattcaacgaagagagg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34058756 gaaagctagctagctatacaagagtctcagctaacttccatgatgttgtgtgaagagataacagtttttactaaagatagagaaattcaacgaagagagg 34058657  T
Q  118 ttagagaaaaagaataatttaaaaggaatggtggtgcaaaggagaagagatggttgctttatagagcagtgagatatacacgtgcgacagggctacgtgg 217  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34058656 ttagagaaaaagaataatttaaaaggaatggtggtgcaagggagaagagatggttgctttatagagcagtgagatatacacgtgcgacagggctacgtgg 34058557  T
Q  218 cgcaaagggaaggatgtgaaaaggaaacacgagtttggtcggac 261  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  34058556 cgcaaagggaacgatgtgaaaaggaaacacgagtttggtcggac 34058513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 476 - 620
Target Start/End: Complemental strand, 53190903 - 53190759
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || ||||||||||||| ||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  53190903 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 53190804  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||    
T  53190803 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 53190759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 475 - 623
Target Start/End: Original strand, 21348722 - 21348870
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| |||| |||||||||||||||| ||||||||| |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  21348722 tgactaatacctcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgt 21348821  T
Q  575 ccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||||||||| |||||||||| || |||| ||||||| ||||    
T  21348822 ccatcaaaatggtccctccgtccaaaagctctgttagtggtgataatgt 21348870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 475 - 620
Target Start/End: Complemental strand, 27899226 - 27899081
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| |||| || ||||||||||||| ||||||||| |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  27899226 tgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgt 27899127  T
Q  575 ccatcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||| |||||||||||| |||||||||| ||||||| |||||||||    
T  27899126 ccataaaaatggtccctccgtccaaaagctccgttagtggtgatga 27899081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 474 - 610
Target Start/End: Original strand, 54898435 - 54898571
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    ||||||||||| |||| || ||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  54898435 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 54898534  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgtta 610  Q
    | ||||||||||||| || |||||||||| |||||||    
T  54898535 ttcatcaaaatggtctctccgtccaaaagctccgtta 54898571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 495 - 620
Target Start/End: Complemental strand, 35905837 - 35905712
Alignment:
Q  495 tccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcg 594  Q
    |||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  35905837 tccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtccctccg 35905738  T
Q  595 tccaaaagttccgttactggtgatga 620  Q
    |||||||| |||| || |||||||||    
T  35905737 tccaaaagctccggtagtggtgatga 35905712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 478 - 623
Target Start/End: Original strand, 43765139 - 43765284
Alignment:
Q  478 ctaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtcca 577  Q
    ||||||| |||| || |||||||||||||||||||||||||||||| || || |||||||| ||||||||||||||||  ||||||||||||||||||||    
T  43765139 ctaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtcca 43765238  T
Q  578 tcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||||||||| | |||||||| ||||||| ||||||||||||    
T  43765239 tcaaaatggtccctccatccaaaagctccgttagtggtgatgatgt 43765284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 474 - 623
Target Start/End: Original strand, 51684608 - 51684757
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    ||||||||||  |||| || ||||||||||||||||||||| | ||||||  |||||||||||||  ||||||||||||||||| |||||||||||||||    
T  51684608 ttgactaatatctcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagacg 51684707  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  51684708 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 51684757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 476 - 620
Target Start/End: Complemental strand, 2226296 - 2226152
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || ||||||||||||| ||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||     
T  2226296 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 2226197  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||| ||||| |||||||||  || |||| |||||||||    
T  2226196 catcaaaatgttccctccgtccaaaaactctgttagtggtgatga 2226152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 476 - 623
Target Start/End: Complemental strand, 30600062 - 30599915
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || |||||| |||||| | ||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  30600062 gactaatacctcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgtc 30599963  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
     ||||||||||||||| |||||||||| || |||| ||||||||||||    
T  30599962 gatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 30599915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 476 - 620
Target Start/End: Original strand, 41977750 - 41977894
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || ||||||||||||| ||||||||| |||||  |||||||||||| | |||||||| | |||||||||||||||||||||||||    
T  41977750 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtc 41977849  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    | |||||||||||||| |||||||||| | ||||| |||||||||    
T  41977850 cgtcaaaatggtccctccgtccaaaagcttcgttaatggtgatga 41977894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 476 - 623
Target Start/End: Complemental strand, 23293314 - 23293167
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| ||||| |||||||||  ||||||| | |||||| | || ||||||||| |||||||||||||||||| ||||||||||| |||||    
T  23293314 gactaatacctcaaatttgttcttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtccatgaattttacaaacgtc 23293215  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||| |||||| |||||||||| ||||||| ||||||||||||    
T  23293214 catcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 23293167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 508 - 623
Target Start/End: Original strand, 46197752 - 46197867
Alignment:
Q  508 aaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccg 607  Q
    |||| ||||||||||| ||| ||||||||||  ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  46197752 aaaactcggtcaaattcgtctctgaattttgcaaaatatctatttagttcctgaattttacagacgtccattaaaatggtcccttcgtccaaaagttccg 46197851  T
Q  608 ttactggtgatgatgt 623  Q
    ||| || |||||||||    
T  46197852 ttagtgatgatgatgt 46197867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 476 - 623
Target Start/End: Original strand, 17515310 - 17515457
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| ||  |||||||||||| |||||| || ||||||  || |||||||||| |||||||||||||||||||||||||||||| |||||    
T  17515310 gactaatacctcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 17515409  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||||||||  ||||||||   |||||| ||||||||||||    
T  17515410 catcaaaatggtccctctgtccaaaatcaccgttagtggtgatgatgt 17515457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 479 - 623
Target Start/End: Original strand, 42279510 - 42279654
Alignment:
Q  479 taatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccat 578  Q
    |||||| |||| || ||| ||||||||||||||||| |   |||| ||| | ||||||||  ||||||||||||||||||||||||||||||||||| ||    
T  42279510 taatacctcaaattcgtcattgaattttcaaaaatcagctcaattcgtctcagaattttgcaaaatatctatttagtccctgaattttacagacgtctat 42279609  T
Q  579 caaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||||| |||||||||| || |||| ||||||||||||    
T  42279610 caaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 42279654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 476 - 620
Target Start/End: Original strand, 46112487 - 46112631
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || ||||||||||||| ||||||||| |||||| ||   |||||||||  ||||||||||||||||| |||||||||||||||||    
T  46112487 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacagacgtc 46112586  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||||||||| ||| |||||| |  |||| |||||||||    
T  46112587 catcaaaatggtccctccgttcaaaagctatgttagtggtgatga 46112631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 476 - 623
Target Start/End: Complemental strand, 3152362 - 3152215
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| ||| ||||| |||||| ||||||||| ||| ||  ||||||||||||| |||||||| | |||||||||||||||||||||||||    
T  3152362 gactaatacctcaaatttatccttaaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 3152263  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||   |||||| |||||||||| ||||||| | ||||||||||    
T  3152262 catcaaatccgtccctccgtccaaaaggtccgttaatagtgatgatgt 3152215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 498 - 620
Target Start/End: Original strand, 2377051 - 2377173
Alignment:
Q  498 ttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtcc 597  Q
    |||||||||||||||| |  |||||| ||||||||||||||  ||| || ||||||||| |||||||||||||||||||||||||||||| ||| ||||     
T  2377051 ttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaatatatttagtctctgaattttacagacgtccatcaaaatggttcctccgtct 2377150  T
Q  598 aaaagttccgttactggtgatga 620  Q
    ||||| ||||||| |||||||||    
T  2377151 aaaagctccgttagtggtgatga 2377173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 475 - 623
Target Start/End: Original strand, 44794207 - 44794354
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| |||| || ||||||||||||| |||| |||| ||| ||  ||||||||||||| |||||||| | |||||||||||||||| |||| ||    
T  44794207 tgactaatacctcaaattcgtccttgaattttgaaaa-tcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttgcagaagt 44794305  T
Q  575 ccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||| | |||||| |||||||||| ||||||| | ||||||||||    
T  44794306 ccatcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 44794354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 494 - 602
Target Start/End: Original strand, 2660230 - 2660338
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    ||||||||||||| ||||||||  ||| || |||||||||||||| |||||||| | ||||||| |||||||||||||||||||||||| | |||||| |    
T  2660230 gtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaaattcgtccctcc 2660329  T
Q  594 gtccaaaag 602  Q
    |||||||||    
T  2660330 gtccaaaag 2660338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 322 - 386
Target Start/End: Complemental strand, 34058453 - 34058389
Alignment:
Q  322 cttagaacttagttgattaatcacttgaacataattagttaatcactgagttgtttgatatgtcc 386  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34058453 cttagagcttagttgattaatcacttgaacataattagttaatcactgagttgtttgatatgtcc 34058389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 474 - 565
Target Start/End: Original strand, 53187740 - 53187831
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| |||| |||||||||||||||| ||||||||||||| || |||||||||||||| |||||||| | |||||||||||||||    
T  53187740 ttgactaatacctcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 554 - 620
Target Start/End: Complemental strand, 7884939 - 7884873
Alignment:
Q  554 gtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  7884939 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttccgttagtggtgatga 7884873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 475 - 565
Target Start/End: Original strand, 30598336 - 30598426
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| |||| || |||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||| |||| |||||||    
T  30598336 tgactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaatttgtccctgaattttgcgaaatagctattttgtccttgaattt 30598426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 540 - 623
Target Start/End: Complemental strand, 48830886 - 48830803
Alignment:
Q  540 gaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||||||||||||  |||||||||| |||||||||||||||||||||| |||||||||| || |||| ||||||||||||    
T  48830886 gaaatatctatttagtctttgaattttacggacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 48830803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 3150252 - 3150341
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||||||| || |||||||||||||| |||||||| | |||||||||||||||    
T  3150252 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 3150341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 23291570 - 23291659
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| | || || ||||||||||||| ||||||||| |||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  23291570 gactaataccttaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattt 23291659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 479 - 565
Target Start/End: Complemental strand, 42282559 - 42282473
Alignment:
Q  479 taatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||| |||| || ||||||||||||||||||||| |||||||| ||  |||||||||| |||||||||||||||||| |||||||    
T  42282559 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtttctgaattttgcgaaatatctatttagtccttgaattt 42282473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 467 - 565
Target Start/End: Original strand, 46308798 - 46308896
Alignment:
Q  467 tttaaagttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||| | ||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||| |||||||| | |||||||||||||||    
T  46308798 tttaaaatcgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46308896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 53094363 - 53094273
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||| |||||||| | |||||||||||||||    
T  53094363 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53094273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 38193599 - 38193510
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||| |||||||| | |||||||||||||||    
T  38193599 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38193510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 41979441 - 41979352
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||| |||||||| | |||||||||||||||    
T  41979441 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 550 - 623
Target Start/End: Complemental strand, 44276266 - 44276193
Alignment:
Q  550 tttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||| ||||||||||||||| ||||||||||||||||| |||||||||| || |||| ||||||||||||    
T  44276266 tttagtccttgaattttacagacgcccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 44276193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 46310525 - 46310436
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||| ||||||||| ||||||||||||| || |||||||||||||| |||||||| | |||||||||||||||    
T  46310525 gactaatacctcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46310436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 477 - 565
Target Start/End: Complemental strand, 2379071 - 2378983
Alignment:
Q  477 actaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||| |||| || ||||||||||||| ||||||||||||| || ||||||||||||||  ||||| ||||||||||| |||||||    
T  2379071 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcaaaatagctatttagtccttgaattt 2378983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 525 - 623
Target Start/End: Complemental strand, 19987689 - 19987591
Alignment:
Q  525 gtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||||||||| |||||||| | ||||||||| ||||||||| ||||||||||||   |||||| |||||||||| || |||| | ||||||||||    
T  19987689 gtccctgaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgtccaaaaggtctgttagtagtgatgatgt 19987591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 475 - 565
Target Start/End: Original strand, 44267980 - 44268070
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| |||| || ||||||||||||||||||||||| ||||||  || |||||||||| |||||| |||||| |||| |||||||    
T  44267980 tgactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatctctgaattttgcgaaatagctattttgtccttgaattt 44268070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 611311 - 611222
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||| | |||||| |||||||||||||  |||||| |||||||| ||||||||||    
T  611311 gactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaatttttcgaaatagctatttagcccctgaattt 611222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 494 - 583
Target Start/End: Original strand, 23774170 - 23774259
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaa 583  Q
    |||||||||||||||  | |||| |||||| |||||| |||| || |||||||| |||||||||||||||||  ||||||||||||||||    
T  23774170 gtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacgtccatcaaaa 23774259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 46611392 - 46611303
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||  ||||| || |||||||||||||| |||||||| | |||||||||||||||    
T  46611392 gactaatacctcaaattcgtccttgaattttgaaaaatttgtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46611303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 494 - 599
Target Start/End: Original strand, 48633895 - 48634000
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    |||||||||||||||    ||||||||||| |||| | |||| || |||||||| | |||||||||||||||  |||||||||||||||| ||||||| |    
T  48633895 gtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctcc 48633994  T
Q  594 gtccaa 599  Q
    ||||||    
T  48633995 gtccaa 48634000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 54900163 - 54900074
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||| |||||||| | || ||||||||||||    
T  54900163 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaattt 54900074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 474 - 565
Target Start/End: Original strand, 46609147 - 46609238
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||  |||| || || |||||||||| ||||||||| ||| || |||||||||||||| |||||||| | |||||||||||||||    
T  46609147 ttgactaatatctcaaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattt 46609238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 565
Target Start/End: Complemental strand, 17517054 - 17516973
Alignment:
Q  484 cttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||| || |||||||||||||||||||||||||||||| || | ||||||||| ||||||  ||||| |||| |||||||    
T  17517054 cttcaaattcgtccttgaattttcaaaaatcggtcaaattcgttcatgaattttgcgaaatagttattttgtccttgaattt 17516973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 35903825 - 35903914
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| |||||||||||||||| ||||||| | ||| ||  |||||||||||||  ||||||| | |||||||||||||||    
T  35903825 gactaatacctcaaatttgtccttgaattttgaaaaatcagccaatttcatccctgaattttgcaaaatatcaaattagtccctgaattt 35903914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 38191895 - 38191984
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || |||||| |||||| |||||| || ||| || |||||||||||||| |||||||| | |||||||||||||||    
T  38191895 gactaatacctcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38191984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 557
Target Start/End: Original strand, 48829356 - 48829437
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtcc 557  Q
    ||||||||| |||| || |||||||||||||||||| || | ||||||  | ||||||||||| ||||||||||||||||||    
T  48829356 gactaatacctcaaattcgtccttgaattttcaaaattcagccaaatttattcctgaattttgcgaaatatctatttagtcc 48829437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 557
Target Start/End: Complemental strand, 51686483 - 51686402
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtcc 557  Q
    ||||||||| |||| || |||||| |||||||||||||| | |||||| |||||| ||||||| ||||||| ||||||||||    
T  51686483 gactaatacctcaaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttatttagtcc 51686402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 46114196 - 46114105
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaa-tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||| ||| |||| ||| |||||||||||| ||||| |||| |||||| |||| ||||||||| |||||||||||||||||  |||||||    
T  46114196 tgactactacctcaaatttatccttgaattttaaaaaaatcggccaaatttgtccttgaattttgcgaaatatctatttagtcattgaattt 46114105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 494 - 565
Target Start/End: Complemental strand, 54412618 - 54412547
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||| |||||||| |||||| ||||||||| |||| ||||||||| || ||||||||||||| |||||||||    
T  54412618 gtccgtgaattttaaaaaattggtcaaattcgtccttgaattttgcgagatatctatttagttcctgaattt 54412547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 564
Target Start/End: Complemental strand, 35572615 - 35572525
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaatt 564  Q
    |||| |||||||| || || ||||||||||||| |||||| | | ||||| || |||||||||||| ||||| ||||||||||| ||||||    
T  35572615 ttgattaatactttaaattcgtccttgaattttaaaaaattgattaaatttgttcctgaattttgaaaaatagctatttagtccttgaatt 35572525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 28626411 - 28626500
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| ||||  | ||||||||||||| ||||||||||||| || ||||||||||| |  |||||||| |  ||||||||||||||    
T  28626411 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 28626500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 44795979 - 44795890
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| |||||||||  || || || ||||||||||| |||||||| | ||||||| |||||||    
T  44795979 gactaatacctcaaattcgtccttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaattt 44795890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 494 - 610
Target Start/End: Complemental strand, 40509017 - 40508901
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    |||||||||||||||    |||| |||||| |||||| |||| || |||||||| | ||| ||| |||||||  ||||||||||||||||  |||||| |    
T  40509017 gtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagacgtccatcaaaaatgtccctcc 40508918  T
Q  594 gtccaaaagttccgtta 610  Q
    ||||||  |||||||||    
T  40508917 gtccaagtgttccgtta 40508901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 565
Target Start/End: Complemental strand, 48635454 - 48635375
Alignment:
Q  486 tcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||| |||| ||||||||||   |||||||||||| |||||| |||| || |||||||| ||||| |||||||||||    
T  48635454 tcaatttcgtccctgaattttcacggatcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 48635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 600
Target Start/End: Complemental strand, 23888878 - 23888772
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    |||| |||||||||| |  |||| ||| || |||||| |||| || ||||||||   |||||||||||||||  || ||||||||||||| ||||||| |    
T  23888878 gtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgtcaaacgtccatcaaaaaggtccctcc 23888779  T
Q  594 gtccaaa 600  Q
    |||||||    
T  23888778 gtccaaa 23888772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 591
Target Start/End: Complemental strand, 41021090 - 41021012
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccct 591  Q
    |||| ||||||||||||| |||| || ||||| || ||||  |||||||||||  |||||||||||||||| |||||||    
T  41021090 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaaggtccct 41021012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 599
Target Start/End: Complemental strand, 45898423 - 45898349
Alignment:
Q  525 gtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaa 599  Q
    ||||||||||| || |||||||| | ||||||| |||||||  |||||||| ||||||| ||||||| |||||||    
T  45898423 gtccctgaattatgcgaaatatcaacttagtccttgaatttgtcagacgtctatcaaaaaggtccctccgtccaa 45898349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 476 - 537
Target Start/End: Complemental strand, 7884988 - 7884927
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaatttt 537  Q
    ||||||||| |||| || ||||||||||||| ||||||||| |||||  |||||||||||||    
T  7884988 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttt 7884927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 494 - 599
Target Start/End: Complemental strand, 31887558 - 31887453
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    |||||||||||||||   ||||||||||||   || | |||| || |||||||| | |||||||||||||||  |||| ||| ||||||| ||||||| |    
T  31887558 gtccttgaattttcacggatcggtcaaattcaaccatcaattatgcgaaatatcaacttagtccctgaatttgtcagatgtctatcaaaaaggtccctcc 31887459  T
Q  594 gtccaa 599  Q
    ||||||    
T  31887458 gtccaa 31887453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 53092623 - 53092712
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||| || |||||| |||||| || ||| || |||||||||||||| |||||||| | ||| |||||||||||    
T  53092623 gactaatacctcaaattcgtctttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 53092712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 572 - 620
Target Start/End: Original strand, 600805 - 600853
Alignment:
Q  572 cgtccatcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||||||||||||| |||| ||||| ||||||| |||||||||    
T  600805 cgtccatcaaaatggtccctccgtctaaaagctccgttagtggtgatga 600853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 2661992 - 2661908
Alignment:
Q  481 atacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||| |||| || ||||||||||||| ||||||||  ||| || |||| ||||||||| |||||||| | ||||||| |||||||    
T  2661992 atacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaattt 2661908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 469 - 556
Target Start/End: Original strand, 600718 - 600805
Alignment:
Q  469 taaagttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtc 556  Q
    |||| ||||||||||| |||| ||  |||||||||||| ||||||||  |||||| || | ||||||||   ||||||||||||||||    
T  600718 taaatttgactaatacctcaaattcatccttgaattttaaaaaatcgaccaaatttgttcatgaattttacaaaatatctatttagtc 600805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 589
Target Start/End: Complemental strand, 2977435 - 2977340
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcc 589  Q
    ||||||||||||| |  |||||| ||||||  ||||| |||| || |||||||| ||| ||||||| |||||  || ||||||||||||| |||||    
T  2977435 gtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgtcatacgtccatcaaaaaggtcc 2977340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 532 - 599
Target Start/End: Complemental strand, 24382961 - 24382894
Alignment:
Q  532 aattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaa 599  Q
    |||| ||||||||||| | ||||||| || ||||  |||||||||||||||| ||||||| |||||||    
T  24382961 aattatgagaaatatcaacttagtccatggatttgtcagacgtccatcaaaaaggtccctccgtccaa 24382894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 526 - 596
Target Start/End: Complemental strand, 33113254 - 33113184
Alignment:
Q  526 tccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtc 596  Q
    ||||| |||| || |||||||| | ||||||||| |||||  |||||||||||||||| ||||||| ||||    
T  33113254 tccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacgtccatcaaaaaggtccctccgtc 33113184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 515 - 591
Target Start/End: Complemental strand, 33852755 - 33852679
Alignment:
Q  515 ggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccct 591  Q
    |||||||||  ||||| |||| || |||||||| ||||| |  ||||||||  |||||||||||||||| |||||||    
T  33852755 ggtcaaatttatccctcaattatgcgaaatatcaatttaatttctgaatttatcagacgtccatcaaaaaggtccct 33852679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 6e-54; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 476 - 623
Target Start/End: Complemental strand, 36057737 - 36057590
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  36057737 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgtc 36057638  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  36057637 catcaaaatggtccctccgtccaaaagctccgttaatggtgatgatgt 36057590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 474 - 620
Target Start/End: Original strand, 17574316 - 17574462
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    ||||||||||| |||| || ||||||||||||| ||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17574316 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 17574415  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||    
T  17574416 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 17574462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 476 - 620
Target Start/End: Original strand, 2179787 - 2179931
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| |||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||| ||    
T  2179787 gactaatacctcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacatc 2179886  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||||||||| |||||||||| ||| ||| |||||||||    
T  2179887 catcaaaatggtccctccgtccaaaagctccattagtggtgatga 2179931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 476 - 620
Target Start/End: Original strand, 7267843 - 7267987
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || ||||||||||||| ||||||||  |||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  7267843 gactaatacctcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacgtc 7267942  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||| ||||| |||||||||| ||||||| |||||||||    
T  7267943 catcaaaatgatccctccgtccaaaagctccgttagtggtgatga 7267987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 476 - 620
Target Start/End: Complemental strand, 30468404 - 30468260
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    |||| |||| ||||||| ||||||||||||| |||||| ||||||||| ||| || ||||||| |||||||||||||||||| |||||||||||||||||    
T  30468404 gactgatacctcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgtc 30468305  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||    
T  30468304 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 30468260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 476 - 623
Target Start/End: Original strand, 34327635 - 34327782
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || |||||||||||||| ||||| || |||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  34327635 gactaatacctcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 34327734  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||||| || |||||||||| || |||| ||||||||||||    
T  34327735 catcaaaatggtctctccgtccaaaagctctgttagtggtgatgatgt 34327782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 474 - 623
Target Start/End: Complemental strand, 18625134 - 18624985
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    |||| |||||| |||| || |||||||||||||||   ||| |  ||||| |||||||||||||| ||||||||||||||||||||||||||||||  ||    
T  18625134 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcg 18625035  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||||||||||| | |||||||||| ||||||| | ||||||||||    
T  18625034 tccatcaaaatggtccttccgtccaaaagctccgttagtagtgatgatgt 18624985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 475 - 619
Target Start/End: Original strand, 8539674 - 8539818
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| |||| || ||||||||||||| |||||||  ||||||| || | ||||||||| |||||||||||||||||||||||||||||| ||||    
T  8539674 tgactaatacctcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattttacaaacgt 8539773  T
Q  575 ccatcaaaatggtcccttcgtccaaaagttccgttactggtgatg 619  Q
    |||||||||| ||| || | |||||||| ||||||| || |||||    
T  8539774 ccatcaaaatagtcgctccatccaaaagctccgttagtgttgatg 8539818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 476 - 623
Target Start/End: Complemental strand, 2854450 - 2854304
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || ||||||||||||| ||||||||||||| || |||||||||||||  |||| ||| | |||||||||||||||||||||||||    
T  2854450 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaa-atcaaattagtccctgaattttacagacgtc 2854352  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    || |||| | |||||| |||||||||| ||| ||| | ||||||||||    
T  2854351 caacaaattcgtccctccgtccaaaaggtccattaatagtgatgatgt 2854304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 30463900 - 30463989
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  30463900 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 475 - 582
Target Start/End: Complemental strand, 24541337 - 24541230
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| |||| || ||| ||||||||| ||||||||| ||| || |||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  24541337 tgactaatacctcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgt 24541238  T
Q  575 ccatcaaa 582  Q
    ||||||||    
T  24541237 ccatcaaa 24541230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 474 - 565
Target Start/End: Complemental strand, 12738827 - 12738736
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| |||| || ||||||||||||| ||||||||| |||||| || ||||||||||| ||||||||||||||||||||||||||    
T  12738827 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 474 - 565
Target Start/End: Complemental strand, 12801650 - 12801559
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| |||| || ||||||||||||| ||||||||| |||||| || ||||||||||| ||||||||||||||||||||||||||    
T  12801650 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12801559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 476 - 623
Target Start/End: Complemental strand, 29621905 - 29621758
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| ||||  | ||| ||||||||| ||||||||| ||| || |||||||||||||  |||||||| | |||||||||||||||| ||||||||    
T  29621905 gactaatacctcaaaatagtcattgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 29621806  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||   |||||| |||||||||  ||||||| | ||||||||||    
T  29621805 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 29621758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 8541360 - 8541271
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||| ||||||||| ||||||||| |||||| |||||||||||||| |||||||||||||||||| |||||||    
T  8541360 gactaatacctcaaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaattt 8541271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 494 - 623
Target Start/End: Original strand, 40780568 - 40780697
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    ||||||||||||| ||||||||| ||| || |||||||||||||  |||||||| | |||||||||||||||| || ||||||||||||   |||||| |    
T  40780568 gtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccatcaaatcagtccctcc 40780667  T
Q  594 gtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||  |||||||   ||||||||||    
T  40780668 gtccaaaatgtccgttaacagtgatgatgt 40780697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 476 - 623
Target Start/End: Complemental strand, 42473731 - 42473584
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| ||||  | ||||||||||||| ||||||||| ||| || ||||||||||| |  |||||||| |  ||||||||||||||||||||||||    
T  42473731 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattttacagacgtc 42473632  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||   |||| | |||||||||  |||||||   ||||||||||    
T  42473631 catcaaatcagtccttccgtccaaaatgtccgttaacagtgatgatgt 42473584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 2852886 - 2852975
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||||||| || |||||||||||||| |||||||| | ||||| |||||||||    
T  2852886 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaattt 2852975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 21843081 - 21842992
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||||||| || |||| ||||||||| |||||||| | |||||||||||||||    
T  21843081 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaattt 21842992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 34328916 - 34328827
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || |||||||||||||||||||||||||||||| |||| |||||||||  ||||| |||||| |||| |||||||    
T  34328916 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccatgaattttgcaaaatagctattttgtccttgaattt 34328827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 469 - 565
Target Start/End: Original strand, 32134224 - 32134320
Alignment:
Q  469 taaagttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||| ||||||||||| |||| |||||| |||||||||||||||||   |||||| |||  |||||||||  |||||||||||||||||||||||||    
T  32134224 taaaattgactaatacctcaaatttgtcattgaattttcaaaaatcaaccaaattcgtctttgaattttgtaaaatatctatttagtccctgaattt 32134320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 488 - 612
Target Start/End: Original strand, 24496755 - 24496879
Alignment:
Q  488 aattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggt 587  Q
    |||||||||||| |||||  |  ||||||||||||| |||||| |||| || |||||||| | ||| |||||||||||   |||||| ||||||||||||    
T  24496755 aattttgtccttaaatttgtacgaatcggtcaaatttgtccctcaattatgtgaaatatcaaattaatccctgaatttgtgagacgttcatcaaaatggt 24496854  T
Q  588 cccttcgtccaaaagttccgttact 612  Q
    || | |||||||| |||| ||||||    
T  24496855 ccatccgtccaaatgttctgttact 24496879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 7269536 - 7269446
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| |||| || ||| ||||||||| |||||||||  || || |||||||||||||| |||||||| | |||||||||||||||    
T  7269536 tgactaatacctcaaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 494 - 600
Target Start/End: Complemental strand, 15459295 - 15459189
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    |||||||||||| |||  ||||| |||| | |||||  |||||   |||||  |||||| || ||||||||| |||||||||||||||||||||||||||    
T  15459295 gtccttgaatttgcaaggatcggacaaaatcgtcccccaatttatcgaaatggctattttgttcctgaatttaacagacgtccatcaaaatggtcccttc 15459196  T
Q  594 gtccaaa 600  Q
    |||||||    
T  15459195 gtccaaa 15459189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 474 - 565
Target Start/End: Complemental strand, 28813858 - 28813765
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaa--tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| |||| || ||||||||||||  |||||  | || |||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  28813858 ttgactaatacctcaaattcgtccttgaatttaaaaaaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 28813765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 479 - 565
Target Start/End: Complemental strand, 28822176 - 28822090
Alignment:
Q  479 taatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||| |||| || ||||||||||||| |||||| ||||||||| |||||||||||||| |||||  |||||| |||| |||||||    
T  28822176 taatacctcaaattcgtccttgaatttttaaaaataggtcaaattcgtccctgaattttgcgaaattgctattttgtccttgaattt 28822090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 40782301 - 40782211
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| ||||  | ||||||||||||| ||||||||| ||| || |||||||||||||  |||||||| | |||||||||||||||    
T  40782301 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 40782211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 501 - 567
Target Start/End: Complemental strand, 43492197 - 43492131
Alignment:
Q  501 aattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaatttta 567  Q
    |||||||||||||| | ||| ||  ||||||||||||| ||||||||||||||||||||||||||||    
T  43492197 aattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtccctgaatttta 43492131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 513 - 598
Target Start/End: Complemental strand, 38178180 - 38178095
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtcca 598  Q
    |||||||||||  ||||| |||| || |||||||| |||||||  ||||||||  |||||||||||||||| ||||||||||||||    
T  38178180 tcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgtccatcaaaaaggtcccttcgtcca 38178095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 513 - 598
Target Start/End: Complemental strand, 38205404 - 38205319
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtcca 598  Q
    |||||||||||  ||||| |||| || |||||||| |||||||  ||||||||  |||||||||||||||| ||||||||||||||    
T  38205404 tcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgtccatcaaaaaggtcccttcgtcca 38205319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 479 - 563
Target Start/End: Original strand, 41493847 - 41493931
Alignment:
Q  479 taatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaat 563  Q
    |||||| |||| || ||||||||||||||||||||| | |||||| ||||   ||||||| |||||||||||||||||| |||||    
T  41493847 taatacctcaacttcgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgtgaaatatctatttagtccatgaat 41493931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 525 - 599
Target Start/End: Complemental strand, 18728677 - 18728603
Alignment:
Q  525 gtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaa 599  Q
    |||||| |||| || |||||||| | |||||||||||||||  |||||||||||||||| ||||||| |||||||    
T  18728677 gtcccttaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 18728603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 525 - 599
Target Start/End: Original strand, 32087563 - 32087637
Alignment:
Q  525 gtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaa 599  Q
    |||||| |||| || |||||||| | ||||||||| |||||| |||||||||||||||| ||||||| |||||||    
T  32087563 gtcccttaattatgcgaaatatcaacttagtcccttaatttttcagacgtccatcaaaaaggtccctccgtccaa 32087637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 29620138 - 29620227
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| ||||  | ||||||||||||| ||||||||| ||| || |||||||||||||  |||||||| | |||||| ||||||||    
T  29620138 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaattt 29620227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 599
Target Start/End: Original strand, 35395356 - 35395456
Alignment:
Q  499 tgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtcca 598  Q
    |||||||||| |  |||| ||| || |||||| |||| || |||||||| ||||||| |||||||||   ||||||||||||||| ||||||| ||||||    
T  35395356 tgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtccatcaaaaaggtccctccgtcca 35395455  T
Q  599 a 599  Q
    |    
T  35395456 a 35395456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 599
Target Start/End: Complemental strand, 43318134 - 43318061
Alignment:
Q  526 tccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaa 599  Q
    ||||| |||| || |||||||| | |||||||||||||||  ||||||||||| |||| ||||||| |||||||    
T  43318134 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaaggtccctccgtccaa 43318061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 513 - 588
Target Start/End: Original strand, 38596905 - 38596980
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtc 588  Q
    |||| |||||| |||||| |||| || |||||||| | |||||||||||||||   ||||||||||||||| ||||    
T  38596905 tcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtccatcaaaaaggtc 38596980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 610
Target Start/End: Complemental strand, 35292442 - 35292372
Alignment:
Q  540 gaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgtta 610  Q
    |||||||| | |||||||||||||||  ||||||||||| |||| ||| ||| |||||||| | |||||||    
T  35292442 gaaatatcaacttagtccctgaatttgtcagacgtccataaaaaaggttcctccgtccaaatgctccgtta 35292372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 601
Target Start/End: Original strand, 27349212 - 27349281
Alignment:
Q  532 aattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaa 601  Q
    ||||||| |||||||| |||| |||| |||||||  |  ||||| ||||||||||||||| |||||||||    
T  27349212 aattttgcgaaatatcgattttgtccttgaatttctctcacgtctatcaaaatggtccctccgtccaaaa 27349281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 565
Target Start/End: Original strand, 32835913 - 32835965
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| |||||| |||| || |||||||| ||||| |||||||||||    
T  32835913 tcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 32835965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 2e-51; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 476 - 623
Target Start/End: Original strand, 13282478 - 13282625
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || ||||||||||||| ||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  13282478 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 13282577  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  13282578 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 13282625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 474 - 620
Target Start/End: Complemental strand, 8609933 - 8609787
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    ||||||||||| |||| || || |||||||||| ||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8609933 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 8609834  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||    
T  8609833 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 8609787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 474 - 623
Target Start/End: Complemental strand, 26242460 - 26242311
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    |||| |||||| ||||||| || |||||||||||||||||| | |||||| |||||| ||||||| ||||||||||||||||| ||||||||||||||||    
T  26242460 ttgattaatacctcaatttcgttcttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacg 26242361  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||||||||||||| |||||||||| ||||||| ||| ||||||||    
T  26242360 tccatcaaaatggtccctccgtccaaaagctccgttagtggcgatgatgt 26242311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 494 - 623
Target Start/End: Complemental strand, 41042710 - 41042581
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    ||||||||||||| |||||| || |||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  41042710 gtccttgaattttaaaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtccatcaaaatggtccctcc 41042611  T
Q  594 gtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||| ||||||| ||||||||||||    
T  41042610 gtccaaaagctccgttagtggtgatgatgt 41042581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 474 - 623
Target Start/End: Complemental strand, 13486245 - 13486096
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    ||||||||||| |||| ||||| |||||||||| |||||||||||| ||| ||| ||| |||||| ||||||||||||||||||||||||||||||||||    
T  13486245 ttgactaatacctcaaatttgtgcttgaatttttaaaaatcggtcagattcgtctctggattttgcgaaatatctatttagtccctgaattttacagacg 13486146  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||||||||||  ||||||||| ||| ||| | ||||||||||    
T  13486145 tccatcaaaatggtccctctgtccaaaagctccattagtagtgatgatgt 13486096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 475 - 620
Target Start/End: Original strand, 38547227 - 38547372
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| |||| || ||||||||||||| ||||||||| |||||  |||| ||||||||| |||||||| | ||||||||||||||||||||||||    
T  38547227 tgactaatacctcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacgt 38547326  T
Q  575 ccatcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    ||||||||||||||||| | |||||||| ||||||| |||||||||    
T  38547327 ccatcaaaatggtccctccatccaaaagctccgttagtggtgatga 38547372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 479 - 623
Target Start/End: Original strand, 42941777 - 42941921
Alignment:
Q  479 taatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccat 578  Q
    |||||| |||| || ||||||||||||| ||||||| | |||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  42941777 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtccat 42941876  T
Q  579 caaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||| |||||| |||||||||  ||||||| ||| ||||||||    
T  42941877 caaaatagtccctccgtccaaaatctccgttagtggagatgatgt 42941921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 474 - 623
Target Start/End: Complemental strand, 41825790 - 41825641
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    |||| |||||| |||| || |||||||||||||||||||||    ||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  41825790 ttgattaatacctcaaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacg 41825691  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||||||| || |||||||||| || |||| | ||||||||||    
T  41825690 tccatcaaaatggtcactccgtccaaaagctctgttagtagtgatgatgt 41825641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 476 - 620
Target Start/End: Complemental strand, 13108480 - 13108336
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||  |||| || ||||||||||||| |||||||||  ||||  |||||||||||||| |||||||| | |||||||||||||||||||||||||    
T  13108480 gactaataactcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13108381  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||||||||| |||||||||| | ||||| |||||||||    
T  13108380 catcaaaatggtccctccgtccaaaagcttcgttagtggtgatga 13108336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 476 - 623
Target Start/End: Complemental strand, 7745256 - 7745109
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||  |||| || ||| ||||||||||||||||| | |||||| ||| |||||||||| ||||||| ||||||||||||| ||||||||||| ||    
T  7745256 gactaatatctcaaattcgtctttgaattttcaaaaatcagccaaattcgtctctgaattttgcgaaatatttatttagtccctgtattttacagacatc 7745157  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||||||||||| | |||||||| ||||||| ||||||||||||    
T  7745156 catcaaaatggtccctccatccaaaagctccgttagtggtgatgatgt 7745109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 476 - 623
Target Start/End: Original strand, 22272334 - 22272483
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaa--tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    ||||||||| |||| || ||| ||||||||| |||||  || |||||||| |||||||||||||| | |||||||||||||||||||||||||||| |||    
T  22272334 gactaatacctcaaattcgtctttgaattttaaaaaaaatcagtcaaattcgtccctgaattttgcgtaatatctatttagtccctgaattttacaaacg 22272433  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||| |||||| | |||||||| ||||||| ||||||||||||    
T  22272434 tccatcaaaatagtccctccatccaaaagctccgttagtggtgatgatgt 22272483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 477 - 600
Target Start/End: Original strand, 5036446 - 5036569
Alignment:
Q  477 actaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtcc 576  Q
    |||||||| |||| || |||||| |||||| ||||||| |||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||     
T  5036446 actaatacctcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtct 5036545  T
Q  577 atcaaaatggtcccttcgtccaaa 600  Q
    |||||||||||| || ||||||||    
T  5036546 atcaaaatggtctctccgtccaaa 5036569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 476 - 623
Target Start/End: Original strand, 27691154 - 27691301
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||| |||||||| | |||||||||||||||||||||||||    
T  27691154 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 27691253  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||   |||||| |||||||||| ||||| | | ||||||||||    
T  27691254 catcaaatccgtccctccgtccaaaaggtccgtcaatagtgatgatgt 27691301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 519 - 623
Target Start/End: Complemental strand, 9673266 - 9673162
Alignment:
Q  519 aaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgttactggtgat 618  Q
    ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| |||||||    
T  9673266 aaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtctaaaagcttcgttagtggtgat 9673167  T
Q  619 gatgt 623  Q
    |||||    
T  9673166 gatgt 9673162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 476 - 623
Target Start/End: Complemental strand, 33708947 - 33708801
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| ||  |||||||||||| ||||| ||||||| || |||||||||||||| |||||||  | ||||||||||||||||||| |||||    
T  33708947 gactaatacctcaaattcatccttgaattttaaaaaa-cggtcaatttcgtccctgaattttgcgaaatattaaattagtccctgaattttacaaacgtc 33708849  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||   |||||| |||||||||| ||||||| | ||||||||||    
T  33708848 catcaaatctgtccctccgtccaaaaggtccgttaatagtgatgatgt 33708801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 529 - 623
Target Start/End: Complemental strand, 40339771 - 40339677
Alignment:
Q  529 ctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||| || |||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||| ||||||| | ||||||||||    
T  40339771 ctgaattatgtgaaatatctatttagtccatgaattttacagatgtccatcaaaatggtcccttcatccaaaagctccgttagtagtgatgatgt 40339677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 42943515 - 42943426
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||    
T  42943515 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 42943426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 494 - 623
Target Start/End: Original strand, 15305815 - 15305944
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    ||||||||||||| |||||| |||||| || ||||||||||| |  |||||||| | ||||||||||||||||||||||||||||||||   |||||| |    
T  15305815 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15305914  T
Q  594 gtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||  |||||||   ||||||||||    
T  15305915 gtccaaaatatccgttaacagtgatgatgt 15305944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 494 - 623
Target Start/End: Original strand, 15486184 - 15486313
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    ||||||||||||| |||||| |||||| || ||||||||||| |  |||||||| | ||||||||||||||||||||||||||||||||   |||||| |    
T  15486184 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15486283  T
Q  594 gtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||  |||||||   ||||||||||    
T  15486284 gtccaaaatatccgttaacagtgatgatgt 15486313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 22273980 - 22273891
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| |||||||||||||||| ||||||||| |||||| ||| ||||||||||  |||||||||||||||||||||||||    
T  22273980 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaattt 22273891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 476 - 557
Target Start/End: Complemental strand, 34681155 - 34681074
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtcc 557  Q
    ||||||||| |||| || ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  34681155 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtcc 34681074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 474 - 565
Target Start/End: Original strand, 35509212 - 35509303
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| |||| || ||||||||||||| ||||||||||||| || |||||||||||||| |||||||| | |||||||||||||||    
T  35509212 ttgactaatacctcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35509303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 476 - 557
Target Start/End: Original strand, 26238726 - 26238807
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtcc 557  Q
    ||||||||| |||| || ||||||||||||||||||||| | |||||| |||||||||||||| ||||||||||||||||||    
T  26238726 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtcc 26238807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 475 - 565
Target Start/End: Original strand, 29237150 - 29237240
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| |||| || ||||||||||||| ||||||||||||| || |||||||||||||  |||||||| | |||||||||||||||    
T  29237150 tgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 29237240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 35510908 - 35510819
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||||||| || |||| ||||||||| |||||||| | |||||||||||||||    
T  35510908 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaattt 35510819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 477 - 565
Target Start/End: Original strand, 33707207 - 33707295
Alignment:
Q  477 actaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||| |||| || ||||||||||||| ||||||||||||| || |||||||||||||  |||||||| | |||||||||||||||    
T  33707207 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33707295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 474 - 565
Target Start/End: Complemental strand, 5038152 - 5038062
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| |||| || ||| ||||||||| |||||||||||||||| || | ||||||||| |||||| |||||||||||||||||||    
T  5038152 ttgactaatacctcaaattcgtc-ttgaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaattt 5038062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 33762803 - 33762713
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||  |||||||| | |||||||||||||||    
T  33762803 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33762713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 38548921 - 38548831
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||| |||||||| | ||| |||||||||||    
T  38548921 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 38548831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 601793 - 601704
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||  |||||||| | |||||||||||||||    
T  601793 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 601704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 27692926 - 27692837
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||| ||| || ||||||||||||||  ||||||| | |||||||||||||||    
T  27692926 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaattt 27692837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 474 - 565
Target Start/End: Original strand, 13106802 - 13106893
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| | || || ||||||||||||| ||||||||| ||| ||  ||||||||||||| |||||||| | |||||||||||||||    
T  13106802 ttgactaataccttaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 13106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 8608237 - 8608327
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctg-aattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| | || || ||||||||||||| ||||||||||||| || ||||||| ||||||| |||||||| | |||||||||||||||    
T  8608237 gactaataccttaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaattt 8608327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 475 - 565
Target Start/End: Original strand, 33761068 - 33761158
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| |||| || ||| ||||||||| ||||||| | ||| || |||||||||||||| |||||||| | |||||||||||||||    
T  33761068 tgactaatacctcaaattcgtctttgaattttgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 33761158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 29239276 - 29239187
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||| ||||||  |||||||| | |||||||||||||||    
T  29239276 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 494 - 599
Target Start/End: Original strand, 31821436 - 31821541
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    |||| |||||||||| |  |||||||| || |||||| |||| || |||||||| | |||||||| ||||||  |||||||||||||||| ||||||| |    
T  31821436 gtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaatttatcagacgtccatcaaaaaggtccctcc 31821535  T
Q  594 gtccaa 599  Q
    ||||||    
T  31821536 gtccaa 31821541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 494 - 565
Target Start/End: Original strand, 9671995 - 9672066
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||||||||  ||||  ||||||| |||| ||||||||| ||||||||||||||||||| ||||||    
T  9671995 gtccttgaattttcaccaatcaatcaaattcgtccatgaattttgcgaaatatctatttagtccccgaattt 9672066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 494 - 565
Target Start/End: Complemental strand, 13284066 - 13283995
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||||| ||||||||| ||| || |||||||||||||| |||||||| | ||||||| |||||||    
T  13284066 gtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaattt 13283995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 623
Target Start/End: Complemental strand, 27407041 - 27406894
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| ||||  | ||||||||||||| |||||| || ||| || |||| |||||| |  |||||||  |  ||||||||||||||||||||||||    
T  27407041 gactaatacctcaaaatagtccttgaattttgaaaaattggccaatttcgtccatgaattattcgaaatattaaaatagtccctgaattttacagacgtc 27406942  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||   ||| || |||||||||  |||||||   ||||||||||    
T  27406941 catcaaatcagtctctccgtccaaaatgtccgttaacagtgatgatgt 27406894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 474 - 557
Target Start/End: Complemental strand, 43262228 - 43262145
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtcc 557  Q
    ||||||||||| |||| || |||||| |||||||||||||| |  ||||| | |||| ||||||| ||||||||||||||||||    
T  43262228 ttgactaatacctcaaattcgtccttaaattttcaaaaatcagctaaattcgaccctaaattttgcgaaatatctatttagtcc 43262145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 15308351 - 15308261
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| ||||  | ||||||||||||| ||||||||| ||| || ||||||||||| |  |||||||| | |||||||||||||||    
T  15308351 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15308261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 15488720 - 15488630
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| ||||  | ||||||||||||| ||||||||| ||| || ||||||||||| |  |||||||| | |||||||||||||||    
T  15488720 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 513 - 599
Target Start/End: Complemental strand, 42897861 - 42897775
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaa 599  Q
    |||| |||||| |||||| |||| || |||||||| | ||||||| |||||||  |||||||||||||||| ||||||| |||||||    
T  42897861 tcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 42897775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 13484545 - 13484634
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||| | |||| || ||| ||||||||||||||||||| |||||| |||||||||||||| |||||   ||||| |||| |||||||    
T  13484545 gactaatgcctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaattgttattttgtccttgaattt 13484634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 486 - 591
Target Start/End: Complemental strand, 31201257 - 31201152
Alignment:
Q  486 tcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatg 585  Q
    ||||||| |||| ||||||||||    |||| |||||| |||| | |||| || |||||||| ||||| |||||||||||  |||||||||||||||| |    
T  31201257 tcaatttagtccctgaattttcacgggtcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaag 31201158  T
Q  586 gtccct 591  Q
    ||||||    
T  31201157 gtccct 31201152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 494 - 599
Target Start/End: Complemental strand, 37526129 - 37526024
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    |||||||||||||||    |||||||||||  | | | |||| || |||||||| | |||||||||||||||| ||||| |||||||||| ||||||| |    
T  37526129 gtccttgaattttcacgcgtcggtcaaattcattcttcaattatgcgaaatatcaacttagtccctgaatttttcagacatccatcaaaaaggtccctcc 37526030  T
Q  594 gtccaa 599  Q
    ||||||    
T  37526029 gtccaa 37526024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 557
Target Start/End: Original strand, 41823890 - 41823971
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtcc 557  Q
    ||||||||| | || || ||||||||||||||||||||| |  || || |||| ||||||||| ||||||||||||||||||    
T  41823890 gactaataccttaaattcgtccttgaattttcaaaaatcagctaatttcgtccttgaattttgcgaaatatctatttagtcc 41823971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 486 - 600
Target Start/End: Original strand, 9184393 - 9184507
Alignment:
Q  486 tcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatg 585  Q
    ||||||| |||||||||||| ||  |||||| |||||| ||| |  || |  | |||||||| | |||||||||||||||  |||||||| ||| |||||    
T  9184393 tcaatttcgtccttgaatttgcacgaatcggccaaattcgtcgcccaactacgcgaaatatcaaattagtccctgaatttgtcagacgtcgatcgaaatg 9184492  T
Q  586 gtcccttcgtccaaa 600  Q
    |||||| ||||||||    
T  9184493 gtccctccgtccaaa 9184507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 494 - 591
Target Start/End: Complemental strand, 33160254 - 33160157
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccct 591  Q
    ||||||||||||||| |  |||| ||||||  ||||| |||| || |||||||| | |||||| ||||||||  |||||| ||||||||| |||||||    
T  33160254 gtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgtcagacgcccatcaaaaaggtccct 33160157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 512 - 599
Target Start/End: Complemental strand, 33750472 - 33750385
Alignment:
Q  512 atcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaa 599  Q
    ||||| ||| || |||||| |||| || |||||||| | |||||||||||||||  ||||| | |||||||| ||||||| |||||||    
T  33750472 atcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtccaa 33750385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 491 - 565
Target Start/End: Original strand, 3151972 - 3152046
Alignment:
Q  491 tttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||||||||  |||||| || |||||| |||||||| ||||   ||||| ||||||||||||| |||||    
T  3151972 tttgtccttgaatttaaaaaaattggccaaatttgtccctgagtttttcaaaatagctatttagtcccttaattt 3152046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 599
Target Start/End: Original strand, 8654537 - 8654622
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaa 599  Q
    ||||||||||| || ||| |||| || |||||||| ||||| | | |||||||  |||||||||||||||| ||||||| |||||||    
T  8654537 tcggtcaaattcgttcctcaattatgcgaaatatc-atttaattcttgaatttatcagacgtccatcaaaagggtccctccgtccaa 8654622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 599
Target Start/End: Complemental strand, 38882903 - 38882798
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    |||||||||||||||   ||||||||||||  ||| | || | || || ||||| ||||| |||||||||||  ||||||||||| ||||  |||||| |    
T  38882903 gtccttgaattttcacggatcggtcaaattcatccttcaactatgcgagatatcaatttaatccctgaatttgtcagacgtccataaaaaatgtccctcc 38882804  T
Q  594 gtccaa 599  Q
    ||||||    
T  38882803 gtccaa 38882798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 602
Target Start/End: Complemental strand, 28433830 - 28433714
Alignment:
Q  486 tcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatg 585  Q
    ||||||| |||| |||||||||||  ||||| |||||| |||||| |||||   |||||||| |  ||||||||||||||    |||||||||| |  |     
T  28433830 tcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcgatttc 28433731  T
Q  586 gtcccttcgtccaaaag 602  Q
    |||||| ||||||||||    
T  28433730 gtccctccgtccaaaag 28433714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 565
Target Start/End: Original strand, 31199522 - 31199574
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||| |||||| |||||| |||| ||||||||||| ||||| |||||||||||    
T  31199522 tcggccaaattcgtcccttaattatgagaaatatcaatttaatccctgaattt 31199574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 2e-51; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 476 - 623
Target Start/End: Original strand, 2869579 - 2869726
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| || |||||||||||||||    
T  2869579 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgtc 2869678  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||||||||||| |||||||||| || |||| ||||||||||||    
T  2869679 catcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 2869726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 474 - 620
Target Start/End: Complemental strand, 31238621 - 31238475
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    ||||||||||| |||| |||||||||||||||| ||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31238621 ttgactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 31238522  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||||||||| |  ||||||||| ||||||| |||||||||    
T  31238521 tccatcaaaatggtccatctgtccaaaagctccgttagtggtgatga 31238475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 474 - 620
Target Start/End: Complemental strand, 25278494 - 25278348
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    ||||||||||| |||| || ||||||||||||| |||||||||||||||| |||||||||||||| |||||| ||||||||||| ||||||||||| |||    
T  25278494 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacg 25278395  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||    
T  25278394 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 25278348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 474 - 623
Target Start/End: Original strand, 27087281 - 27087430
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    ||||||||||| |||| || |||||| |||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||    
T  27087281 ttgactaatacctcaaattcgtccttaaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacg 27087380  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||||| || | |||||||||| ||||||| ||||||||||||    
T  27087381 tccatcaaaatggcccatccgtccaaaagctccgttagtggtgatgatgt 27087430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 474 - 620
Target Start/End: Complemental strand, 4856092 - 4855946
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    ||||||||||| |||| || ||||||||||||| ||||||||| |||||  |||||||||||||| |||||||| | |||||||||||||||||||||||    
T  4856092 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacg 4855993  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||    
T  4855992 tccatcaaaatggtccctccgtccaaaagctccgttaatggtgatga 4855946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 476 - 620
Target Start/End: Original strand, 37344342 - 37344486
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || ||||||||||||| |||||||||||||||| |||||||||||||| |||||| ||||||||||  ||||||||||| |||||    
T  37344342 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatacgtc 37344441  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||    
T  37344442 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 37344486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 475 - 623
Target Start/End: Complemental strand, 46583681 - 46583533
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| |||| || ||||||||||||| ||||||||||||| || |||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  46583681 tgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgt 46583582  T
Q  575 ccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||| | |||||| |||||||||| ||||||| ||||||||||||    
T  46583581 ccatcaaatttgtccctccgtccaaaaggtccgttaatggtgatgatgt 46583533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 475 - 620
Target Start/End: Complemental strand, 6818803 - 6818658
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| |||| || ||||||||||||| ||||||||| |||| | ||||||| |||| |  ||||||||||||||||||||||||||||||||||    
T  6818803 tgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagacgt 6818704  T
Q  575 ccatcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||    
T  6818703 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6818658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 476 - 620
Target Start/End: Complemental strand, 34778262 - 34778118
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || ||||||||||||| ||||||||| |||||  |||||||||||||| |||||||| | ||||||||||||||||||||| |||    
T  34778262 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgtc 34778163  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||    
T  34778162 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 34778118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 466 - 619
Target Start/End: Complemental strand, 50556231 - 50556078
Alignment:
Q  466 gtttaaagttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||| | ||||||||  |||| || ||| ||||||||| ||||||| |||||||| ||| |||||||||| |||||||||||||||||||| |||||    
T  50556231 gtttaaattagactaatatctcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccctaaattt 50556132  T
Q  566 tacagacgtccatcaaaatggtcccttcgtccaaaagttccgttactggtgatg 619  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||| ||||||||    
T  50556131 tacagacgtctatcaaaatggtccctccgtccaaaagctccgttagtggtgatg 50556078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 494 - 623
Target Start/End: Complemental strand, 51896258 - 51896129
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    |||||| |||||| ||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| |    
T  51896258 gtccttaaattttaaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagatgtccatcaaaatagtccctcc 51896159  T
Q  594 gtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||| || |||| ||||||||||||    
T  51896158 gtccaaaagctctgttagtggtgatgatgt 51896129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 475 - 623
Target Start/End: Complemental strand, 3013601 - 3013447
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| |||| || ||||||||||||| ||| ||| |||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  3013601 tgactaatacctcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgt 3013502  T
Q  575 c------catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |      ||||||||| |||||| |||||||||| ||||||| ||||||||||||    
T  3013501 ccatggacatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 3013447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 479 - 623
Target Start/End: Complemental strand, 33602765 - 33602621
Alignment:
Q  479 taatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccat 578  Q
    |||||| |||| || ||||||||||||| ||||||||||||| || |||||||||||||| |||||||| | |||||||||||||||||||||||||| |    
T  33602765 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattttacagacgtccgt 33602666  T
Q  579 caaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||| | |||||| |||||||||| ||||||| |  |||||||||    
T  33602665 caaattagtccctccgtccaaaaggtccgttagtaatgatgatgt 33602621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 518 - 623
Target Start/End: Original strand, 15104483 - 15104588
Alignment:
Q  518 caaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgttactggtga 617  Q
    |||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||| ||| ||||||    
T  15104483 caaattcgttcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaaagctccattagtggtga 15104582  T
Q  618 tgatgt 623  Q
    ||||||    
T  15104583 tgatgt 15104588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 475 - 578
Target Start/End: Complemental strand, 25279078 - 25278975
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| |||| || ||||||||||||||||||||| | |||||| || ||| ||||||| |||||||||||||||||||||||||||||||||||    
T  25279078 tgactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttacagacgt 25278979  T
Q  575 ccat 578  Q
    ||||    
T  25278978 ccat 25278975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 474 - 565
Target Start/End: Original strand, 31236817 - 31236908
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| |||| || ||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||    
T  31236817 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagttcctgaattt 31236908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 476 - 623
Target Start/End: Complemental strand, 9121792 - 9121645
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| ||||  | ||||||||||||| ||||||||| ||| || |||||| ||||||  |||||||| | |||||||||||||||| ||||||||    
T  9121792 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 9121693  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||   |||||| |||||||||  ||||||| | ||||||||||    
T  9121692 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 9121645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 479 - 623
Target Start/End: Complemental strand, 52643736 - 52643597
Alignment:
Q  479 taatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccat 578  Q
    |||||| |||| || |||||| |||||| ||||||| || ||||| |||||||||||||| ||||||| |||||||||||||||||||| | |||||       
T  52643736 taatacctcaaattcgtccttaaatttttaaaaatcagttaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttataaacgtc--- 52643640  T
Q  579 caaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
      | |||||| || |||||||||| ||||||| ||||||||||||    
T  52643639 --agatggtctctccgtccaaaagctccgttagtggtgatgatgt 52643597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 474 - 565
Target Start/End: Original strand, 26223585 - 26223676
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| |||| || ||||||||||||| ||||||||||||| || |||||||||||||| |||||||| | |||||||||||||||    
T  26223585 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 26223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 476 - 623
Target Start/End: Complemental strand, 47013206 - 47013059
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| ||||  | ||||||||||||| ||||||||| ||| || |||||||||||||  |||||||| | |||||||||||||||| || |||||    
T  47013206 gactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtc 47013107  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||   |||||| |||||||||  |||||||   ||||||||||    
T  47013106 catcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 47013059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 474 - 556
Target Start/End: Original strand, 25278852 - 25278934
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtc 556  Q
    ||||||||||| |||| ||  |||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||    
T  25278852 ttgactaatacctcaaattcatccttgaattttcaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtc 25278934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 46582010 - 46582099
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| |||||||||||||||| ||||||||| ||| || |||||||||||||| |||||||| | |||||||||||||||    
T  46582010 gactaatacctcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46582099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 477 - 565
Target Start/End: Original strand, 50554164 - 50554252
Alignment:
Q  477 actaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||| |||| || ||||||||||||| |||||||||||||||| ||||||||||||||  ||||| ||||||||| |||||||||    
T  50554164 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtaaaatagctatttagttcctgaattt 50554252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 471 - 565
Target Start/End: Original strand, 4854405 - 4854499
Alignment:
Q  471 aagttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||| |||||||||||||| || ||||||||||||| |||||||| |||| || |||||||||||||| |||| ||| | |||||||||||||||    
T  4854405 aagtggactaatacttcaaattcgtccttgaattttgaaaaatcgttcaatttcgtccctgaattttgcgaaagatcaaattagtccctgaattt 4854499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 557
Target Start/End: Original strand, 52641888 - 52641969
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtcc 557  Q
    ||||||||| |||| || ||||||||||||||||||||| | |||||| |||||||||||||| ||||||| ||||||||||    
T  52641888 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatatttagtcc 52641969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 474 - 565
Target Start/End: Original strand, 9120037 - 9120128
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| ||||  | ||||||||||||| ||||||||||||| || |||||||||||||  |||||||| | |||||||||||||||    
T  9120037 ttgactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 9120128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 479 - 565
Target Start/End: Original strand, 3011858 - 3011944
Alignment:
Q  479 taatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||| |||| || |||||| |||||| ||||||| |||||||| || ||||||||||| ||||||||||||||||| ||||||||    
T  3011858 taatacctcaaattcgtccttaaattttaaaaaatcagtcaaattcgttcctgaattttgcgaaatatctatttagtctctgaattt 3011944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 479 - 565
Target Start/End: Original strand, 51894570 - 51894656
Alignment:
Q  479 taatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||| |||| || || |||||||||| |||||| ||||||||| ||| |||||||||| ||||||| ||||||||||||||||||    
T  51894570 taatacatcaaattcgttcttgaattttaaaaaatgggtcaaatttgtctctgaattttgcgaaatatatatttagtccctgaattt 51894656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 34776569 - 34776658
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||  |||||||| | |||||||||||||||    
T  34776569 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 486 - 599
Target Start/End: Complemental strand, 36895624 - 36895511
Alignment:
Q  486 tcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatg 585  Q
    |||| ||||||| ||||||||||    |||||||| || |||| | |||| || |||||||| | |||||||||||||||  |||||||||||||||| |    
T  36895624 tcaaatttgtccctgaattttcacgcgtcggtcaacttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 36895525  T
Q  586 gtcccttcgtccaa 599  Q
    ||||||||||||||    
T  36895524 gtcccttcgtccaa 36895511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 563
Target Start/End: Original strand, 8167942 - 8168029
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaat 563  Q
    ||||||||| |||| || ||||||||||||| ||||||||| ||| || ||| |||||||||| |||||||| | |||||||||||||    
T  8167942 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaat 8168029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 474 - 565
Target Start/End: Original strand, 25276740 - 25276831
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| |||| || ||||||||||||| ||||||||| ||| ||  ||| ||||||||| |||||||| | |||||||||||||||    
T  25276740 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaattt 25276831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 477 - 538
Target Start/End: Original strand, 6816866 - 6816927
Alignment:
Q  477 actaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttg 538  Q
    |||||||| |||| || ||||||||||||| |||||||||||||||| ||||||||||||||    
T  6816866 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttg 6816927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 8169657 - 8169568
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||   ||||||| | |||||||||||||||    
T  8169657 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaattt 8169568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 486 - 591
Target Start/End: Original strand, 27940618 - 27940723
Alignment:
Q  486 tcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatg 585  Q
    ||||||| |||| |||||||||| |  | ||||||||| |||||| |||| || |||||||| ||||| ||| |||||||  |||||||||||||||| |    
T  27940618 tcaatttagtccctgaattttcacaggttggtcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttatcagacgtccatcaaaaag 27940717  T
Q  586 gtccct 591  Q
    ||||||    
T  27940718 gtccct 27940723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 37346051 - 37345962
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||  ||| ||  ||||||||||||| |||||||| | |||||||||||||||    
T  37346051 gactaatacctcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 37345962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 474 - 565
Target Start/End: Complemental strand, 27089370 - 27089279
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| |||| || ||||||||||||| |||||||||  || || |||| ||||||||| |||||||| | ||| |||||||||||    
T  27089370 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccttgaattttgtgaaatatcaaattaatccctgaattt 27089279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 494 - 565
Target Start/End: Original strand, 33599236 - 33599307
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||||| |||||||||||||||| |||| ||||||||| |||||||| | ||| || ||||||||    
T  33599236 gtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaattt 33599307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 475 - 557
Target Start/End: Complemental strand, 37088226 - 37088144
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtcc 557  Q
    |||||||||| |||| ||  |||||||||||| ||||||||| |||||| || ||||||||||| |||||| |||||| ||||    
T  37088226 tgactaatacctcaaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattttgtcc 37088144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 2871165 - 2871076
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||  |||| || ||||||||||||| |||||||||  ||||| |||||||||||||| |||||| |||||| |||  |||||||    
T  2871165 gactaatatctcaaattcgtccttgaatttttaaaaatcggctaaattcgtccctgaattttgcgaaatagctattttgtctttgaattt 2871076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 526 - 599
Target Start/End: Original strand, 42134532 - 42134605
Alignment:
Q  526 tccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaa 599  Q
    ||||| |||| || |||||||| | |||||||||||||||  |||||||||||||||| ||||||| |||||||    
T  42134532 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 42134605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 47011456 - 47011545
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| ||||  | ||||||||||||| ||||||||| ||| || |||| ||||||||  |||||||| | |||||||||||||||    
T  47011456 gactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccatgaatttttcgaaatatcaaattagtccctgaattt 47011545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 476 - 544
Target Start/End: Original strand, 33599187 - 33599255
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaat 544  Q
    ||||||||| |||| || ||||||||||||| ||||||||| |||||| |||| |||||||||| ||||    
T  33599187 gactaatacctcaaattcgtccttgaattttgaaaaatcgggcaaattcgtccttgaattttgaaaaat 33599255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 45044947 - 45045009
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattt 536  Q
    ||||||||||| |||| || ||||||||||||| |||||| |||| |||| ||||||||||||    
T  45044947 ttgactaatacctcaaattcgtccttgaattttaaaaaattggtccaattcgtccctgaattt 45045009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 602
Target Start/End: Original strand, 51121961 - 51122031
Alignment:
Q  532 aattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaag 602  Q
    |||||||  ||||||| |||| ||||||||||||  |  ||||||||||||||||||||| ||||||||||    
T  51121961 aattttgcaaaatatcaatttcgtccctgaatttctctcacgtccatcaaaatggtccctccgtccaaaag 51122031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 1444270 - 1444181
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| ||||  | |||||| |||||| ||||||||| ||| || |||||||||||||   ||||||| | |||||||||||||||    
T  1444270 gactaatacctcaaaatagtccttaaattttgaaaaatcggccaattttgtccctgaatttttcaaaatatcaaattagtccctgaattt 1444181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 526 - 593
Target Start/End: Complemental strand, 18184017 - 18183950
Alignment:
Q  526 tccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    ||||| |||| || |||||||| | |||||||||||||||  ||||||||||||||||  ||||||||    
T  18184017 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaatgtcccttc 18183950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 549 - 623
Target Start/End: Original strand, 1442594 - 1442668
Alignment:
Q  549 atttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||| ||||||||||||| |||||||||||||||   |||||| |||||||||  |||||||   ||||||||||    
T  1442594 atttcgtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 1442668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 599
Target Start/End: Original strand, 31801670 - 31801756
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaa 599  Q
    |||||||| || |||||| |||| || |||||||| | ||||||| | |||||   ||||||||||||||| ||||||| |||||||    
T  31801670 tcggtcaacttcgtccctcaattatgcgaaatatcaacttagtccttaaatttgtgagacgtccatcaaaaaggtccctccgtccaa 31801756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 494 - 538
Target Start/End: Original strand, 1442568 - 1442612
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttg 538  Q
    ||||||||||||| ||||||||| ||| || ||||||||||||||    
T  1442568 gtccttgaattttgaaaaatcggccaatttcgtccctgaattttg 1442612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 515 - 599
Target Start/End: Complemental strand, 45381069 - 45380985
Alignment:
Q  515 ggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaa 599  Q
    |||||||||  ||||| |||| || |||||||| | ||||| | |||||||  |||||||||||||||| ||| ||| |||||||    
T  45381069 ggtcaaattcatccctcaattatgcgaaatatcaacttagttcatgaatttgtcagacgtccatcaaaaaggttcctccgtccaa 45380985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 6e-51; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 477 - 623
Target Start/End: Original strand, 20523367 - 20523513
Alignment:
Q  477 actaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtcc 576  Q
    |||||||| |||| ||  |||| |||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  20523367 actaatacatcaaattcttcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 20523466  T
Q  577 atcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  20523467 atcaaaatggtccctccgtccaaaagttctgttagtggtgatgatgt 20523513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 475 - 623
Target Start/End: Original strand, 6899484 - 6899632
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| |||| |||||||||||||||||||||||| |||||||| ||| || ||||||| |||||||||||||||||||| |||||||||||| |    
T  6899484 tgactaatacctcaaatttgtccttgaattttcaaaaatcagtcaaattcgtctctaaattttgtgaaatatctatttagtccctaaattttacagacat 6899583  T
Q  575 ccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||||||||||||||||||||||| ||||||| || |||||||||    
T  6899584 ccatcaaaatggtcccttcgtccaaaagctccgttagtgttgatgatgt 6899632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 475 - 620
Target Start/End: Complemental strand, 32439216 - 32439071
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| |||| || ||| ||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32439216 tgactaatacctcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgt 32439117  T
Q  575 ccatcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    ||||||||||||||||| |||||||||| || |||| | |||||||    
T  32439116 ccatcaaaatggtccctccgtccaaaagatctgttagtagtgatga 32439071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 475 - 623
Target Start/End: Original strand, 10568398 - 10568546
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||| ||||| |||| || ||||||||||||||||||||| |||||||| |||| ||||||| | ||||||| |||||||||||||||||||||||||||    
T  10568398 tgacgaatacatcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtccctgaattttacagacgt 10568497  T
Q  575 ccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    | |||||||| |||||| |||||||||| ||||||| ||||||||||||    
T  10568498 ctatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 10568546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 475 - 623
Target Start/End: Complemental strand, 13613707 - 13613559
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| | || || ||||||||||||| |||||||||||||||| |||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  13613707 tgactaataccttaaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgt 13613608  T
Q  575 ccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||| | |||||| |||||||||| ||| ||| ||||||||||||    
T  13613607 ccatcaaattagtccctccgtccaaaaggtccattagtggtgatgatgt 13613559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 498 - 623
Target Start/End: Complemental strand, 7373060 - 7372935
Alignment:
Q  498 ttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtcc 597  Q
    ||||||||| |||||| ||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  7373060 ttgaatttttaaaaattggtcaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttacaggcgtccatcaaaatggtccctccgtcc 7372961  T
Q  598 aaaagttccgttactggtgatgatgt 623  Q
    ||||| ||| ||| ||||||||||||    
T  7372960 aaaagctccattagtggtgatgatgt 7372935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 474 - 620
Target Start/End: Original strand, 32516875 - 32517021
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    ||||||||||| |||| || ||||||||||||| |||||||||||||||| |||||||||||||   ||||| |||||||| || ||||||||||| |||    
T  32516875 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacatacg 32516974  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    ||||||||||| |||||| |||||||||| ||||||| |||||||||    
T  32516975 tccatcaaaattgtccctccgtccaaaagctccgttagtggtgatga 32517021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 477 - 620
Target Start/End: Original strand, 11355223 - 11355366
Alignment:
Q  477 actaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtcc 576  Q
    |||||||| |||| || ||||||||||||| |||||||||||||||| ||| |||||||||  |||||||||||| | ||||||||||||||||||| ||    
T  11355223 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggcc 11355322  T
Q  577 atcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    | ||||||||||||| |||||||||| |||| || |||||||||    
T  11355323 accaaaatggtccctccgtccaaaagctccggtagtggtgatga 11355366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 529 - 623
Target Start/End: Original strand, 9398713 - 9398807
Alignment:
Q  529 ctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||    
T  9398713 ctgaattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttagtggtgatgatgt 9398807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 494 - 623
Target Start/End: Complemental strand, 14338581 - 14338452
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    ||||||||||||| ||||||| | |||||| ||||   ||||||| ||||| |||| ||  ||||||||||| ||||||||||||||||||||||||| |    
T  14338581 gtccttgaatttttaaaaatcagccaaattcgtcctcaaattttgcgaaatgtctaattcatccctgaatttcacagacgtccatcaaaatggtccctcc 14338482  T
Q  594 gtccaaaagttccgttactggtgatgatgt 623  Q
    || |||||| |||||||||| |||||||||    
T  14338481 gttcaaaagctccgttactgatgatgatgt 14338452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 494 - 621
Target Start/End: Original strand, 3456766 - 3456893
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    ||||||||||||| ||||||||| ||| || |||||||||||||  |||||||| | |||||||||||||||| |||||||||||||||   |||||| |    
T  3456766 gtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 3456865  T
Q  594 gtccaaaagttccgttactggtgatgat 621  Q
    ||||||||  ||||||| | ||||||||    
T  3456866 gtccaaaatatccgttaatagtgatgat 3456893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 476 - 623
Target Start/End: Complemental strand, 32456015 - 32455868
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| ||||  | ||||||||||||| ||||||||||||| || |||||||||||||  |||||||| | |||||| ||||||||| ||||||||    
T  32456015 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtcactgaattttgcagacgtc 32455916  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||   |||||| |||||||||  ||||||| |  |||||||||    
T  32455915 catcaaatcagtccctccgtccaaaatgtccgttaataatgatgatgt 32455868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 11357283 - 11357194
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| |||||||||||||||| ||||||||||||||| ||||| | |||||||||||||||||    
T  11357283 gactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaattt 11357194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 554 - 623
Target Start/End: Original strand, 7049835 - 7049904
Alignment:
Q  554 gtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||  ||||||||||||    
T  7049835 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttcgtggtgatgatgt 7049904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 474 - 565
Target Start/End: Original strand, 7371173 - 7371264
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| |||| || ||||||||||||||||||||||| |||||| |||||||||||||| ||||||  ||||| |||| |||||||    
T  7371173 ttgactaatacctcaacttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaatagatattttgtccttgaattt 7371264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 476 - 557
Target Start/End: Complemental strand, 6902986 - 6902906
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtcc 557  Q
    ||||||||| |||| || ||||||||||||||||||||| |||||||| |||||| ||||||| | ||||||||||||||||    
T  6902986 gactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccctaaattttgcg-aatatctatttagtcc 6902906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 9400124 - 9400035
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||| ||||||||  ||| ||||||||| |||||||||| |||||||| ||||||    
T  9400124 gactaatacctcaaattcgtccttgaattttgaaaaatcagtcaaattcatccttgaattttgcgaaatatctaattagtccccgaattt 9400035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 32518586 - 32518497
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||| ||| ||  ||||||||||||| |||||||| | |||||||||||||||    
T  32518586 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 32518497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 475 - 557
Target Start/End: Original strand, 13610689 - 13610771
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtcc 557  Q
    |||||||||| | || || ||||||||||||| |||||||| ||||||| |||||||||||||| |||||||| | |||||||    
T  13610689 tgactaataccttaaattcgtccttgaattttgaaaaatcgatcaaatttgtccctgaattttgcgaaatatcaaattagtcc 13610771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 557
Target Start/End: Complemental strand, 10570008 - 10569927
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtcc 557  Q
    ||||||||| |||| || ||||||||||||| ||||||| | |||||| |||| |||||||||  |||||||||||||||||    
T  10570008 gactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagtcc 10569927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 3480747 - 3480657
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| ||||  | ||||||||||||| ||||||||| ||| || |||||||||||||  |||||||| |  ||||||||||||||    
T  3480747 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaattt 3480657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 475 - 565
Target Start/End: Original strand, 32454247 - 32454337
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| ||||  | ||||||||||||| ||||||||| ||| || |||| ||||||||  |||||||| | |||||||||||||||    
T  32454247 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaattt 32454337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 486 - 591
Target Start/End: Original strand, 4641365 - 4641470
Alignment:
Q  486 tcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatg 585  Q
    ||||||| |||| ||||||||||    |||| |||||| |||||| |||| || |||||||| ||||| |||||||||||  ||||| |||||||||| |    
T  4641365 tcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctccatcaaaaag 4641464  T
Q  586 gtccct 591  Q
    ||||||    
T  4641465 gtccct 4641470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 498 - 555
Target Start/End: Complemental strand, 7051312 - 7051255
Alignment:
Q  498 ttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagt 555  Q
    ||||||||| ||||||| |||||||| ||| |||||||||| ||||||||||||||||    
T  7051312 ttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagt 7051255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 18645192 - 18645104
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||| | |||| ||| |||||||||| |||||||| | ||||||| |||||||    
T  18645192 gactaatacctcaaattcgtccttgaattttgaaaaatcggac-aattcgtctctgaattttgcgaaatatcaaattagtccatgaattt 18645104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 20525423 - 20525334
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||| ||||||||| |||||| |||||||||  |||||||||||||  ||||| |||||| |||| |||||||    
T  20525423 gactaatacctcaaattcgtctttgaatttttaaaaataggtcaaattcatccctgaattttgcaaaatagctattttgtccttgaattt 20525334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 476 - 544
Target Start/End: Original strand, 32437140 - 32437208
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaat 544  Q
    ||||||||| |||| |||||| ||||||||| ||||||||| ||| || |||||||||||||| |||||    
T  32437140 gactaatacctcaaatttgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaat 32437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 518 - 589
Target Start/End: Original strand, 2968181 - 2968252
Alignment:
Q  518 caaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcc 589  Q
    |||||| |||||| |||| || |||||||| ||||| |||||||||||  |||||||||||||||| |||||    
T  2968181 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtcc 2968252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 591
Target Start/End: Complemental strand, 3018507 - 3018441
Alignment:
Q  525 gtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccct 591  Q
    |||||| |||| || |||||||| | |||||||||||||||  |||||||||||||||| |||||||    
T  3018507 gtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccct 3018441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 538
Target Start/End: Complemental strand, 8605414 - 8605352
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttg 538  Q
    ||||||||| |||| || ||||||||||||||||||||| | |||||| |||||| |||||||    
T  8605414 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctaaattttg 8605352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 479 - 557
Target Start/End: Original strand, 21068628 - 21068706
Alignment:
Q  479 taatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtcc 557  Q
    |||||| |||| || |||||||||||||||| |||| |||||||| ||||   ||||||  ||||||||||||||||||    
T  21068628 taatacctcaaattcgtccttgaattttcaacaatcagtcaaattcgtccacaaattttacgaaatatctatttagtcc 21068706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 591
Target Start/End: Original strand, 29077365 - 29077443
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccct 591  Q
    |||| ||||||||||||| |||| || ||||| || ||||  |||||||||||  |||||||||||||||| |||||||    
T  29077365 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaaggtccct 29077443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 591
Target Start/End: Original strand, 29112337 - 29112415
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccct 591  Q
    |||| ||||||||||||| |||| || ||||| || ||||  |||||||||||  |||||||||||||||| |||||||    
T  29112337 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaaggtccct 29112415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 494 - 554
Target Start/End: Original strand, 33276819 - 33276879
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttag 554  Q
    ||||||||||||| ||||||| |||||||| ||  || ||||||| |||||||||||||||    
T  33276819 gtccttgaattttaaaaaatcagtcaaattcgtttctaaattttgcgaaatatctatttag 33276879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 495 - 537
Target Start/End: Original strand, 7049805 - 7049847
Alignment:
Q  495 tccttgaattttcaaaaatcggtcaaattagtccctgaatttt 537  Q
    |||||||||||||||||||| | |||||| |||||||||||||    
T  7049805 tccttgaattttcaaaaatcagccaaattcgtccctgaatttt 7049847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 2e-50; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 474 - 623
Target Start/End: Original strand, 40560221 - 40560370
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    |||||||||||||||| || ||| ||||||||| ||||||| | |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40560221 ttgactaatacttcaaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 40560320  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||| |||||| ||||||||||||| |||| ||||||||||||    
T  40560321 tccatcaaaatagtccctccgtccaaaagttctgttagtggtgatgatgt 40560370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 475 - 623
Target Start/End: Complemental strand, 39664893 - 39664745
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| |||| || ||||||||||||| ||||||||| |||||| ||||| |||||||  |||||||||||||||||||||||||||||||||||    
T  39664893 tgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttacagacgt 39664794  T
Q  575 ccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  39664793 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 39664745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 475 - 601
Target Start/End: Original strand, 16763075 - 16763201
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| |||| || ||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16763075 tgactaatacctcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgt 16763174  T
Q  575 ccatcaaaatggtcccttcgtccaaaa 601  Q
    ||||||||||||||||| |||||||||    
T  16763175 ccatcaaaatggtccctccgtccaaaa 16763201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 476 - 620
Target Start/End: Complemental strand, 19908391 - 19908246
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaa-tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    ||||||||| |||| || ||||||||||||| ||||| |||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  19908391 gactaatacctcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgt 19908292  T
Q  575 ccatcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    || |||||||||||||| |||||||||| ||||||| |||||||||    
T  19908291 ccgtcaaaatggtccctccgtccaaaagctccgttagtggtgatga 19908246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 475 - 623
Target Start/End: Original strand, 2766933 - 2767081
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||  |||| || ||||||||||||| |||||||||||||| | |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  2766933 tgactaatagctcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgt 2767032  T
Q  575 ccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    | |||||||||||||||  ||||||||| ||||||| ||||||||||||    
T  2767033 ctatcaaaatggtccctctgtccaaaagctccgttagtggtgatgatgt 2767081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 475 - 623
Target Start/End: Complemental strand, 14389229 - 14389081
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| |||| || ||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||| || | ||    
T  14389229 tgactaatacctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgt 14389130  T
Q  575 ccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||||||||| |||||||||||| ||||| | ||||||||||    
T  14389129 ccatcaaaatggtccctccgtccaaaagtttcgttagtagtgatgatgt 14389081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 474 - 621
Target Start/End: Complemental strand, 44709891 - 44709744
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    ||||||||||| |||| || ||||||||||||| ||||| ||| |||||| | |||||||||||| |||||| |||||||||||||||||||||||||||    
T  44709891 ttgactaatacctcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacg 44709792  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgat 621  Q
    |||||||||||||||||| |||||||||| | ||||| ||||||||||    
T  44709791 tccatcaaaatggtccctccgtccaaaagcttcgttagtggtgatgat 44709744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 479 - 623
Target Start/End: Original strand, 17696209 - 17696353
Alignment:
Q  479 taatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccat 578  Q
    |||||| |||| || ||||||||||||||||||||||| ||||||  |||||||||||||  ||||||||||||||||||||||||||||| ||||| ||    
T  17696209 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttacaaacgtcaat 17696308  T
Q  579 caaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||||| || |||||||||| ||||||| ||||||||||||    
T  17696309 caaaatggtcactccgtccaaaagctccgttagtggtgatgatgt 17696353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 480 - 623
Target Start/End: Complemental strand, 42519346 - 42519202
Alignment:
Q  480 aatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaatttt-gagaaatatctatttagtccctgaattttacagacgtccat 578  Q
    ||||| |||| || ||||||||||||| |||||| | |||||||||||| |||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  42519346 aatacctcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccat 42519247  T
Q  579 caaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||||| | |||||||| ||||||| ||||||||||||    
T  42519246 caaaatggtccctccatccaaaagctccgttagtggtgatgatgt 42519202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 475 - 623
Target Start/End: Original strand, 39455168 - 39455316
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaatt-agtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    |||||||||  |||| |||||||||||||||| |||||||||| ||||| ||||| |||||||||  ||||||||||||||||| |||||||||||||||    
T  39455168 tgactaatatctcaaatttgtccttgaattttaaaaaatcggttaaattcagtcc-tgaattttgcaaaatatctatttagtccatgaattttacagacg 39455266  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||||||| || ||| |||||| ||||||| ||| ||||||||    
T  39455267 tccatcaaaatggtctctccgttcaaaagctccgttagtggcgatgatgt 39455316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 512 - 620
Target Start/End: Complemental strand, 16377305 - 16377197
Alignment:
Q  512 atcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgttac 611  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| |||||||     
T  16377305 atcggtcaaatttgtccctgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttag 16377206  T
Q  612 tggtgatga 620  Q
    |||||||||    
T  16377205 tggtgatga 16377197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 498 - 623
Target Start/End: Original strand, 6797529 - 6797654
Alignment:
Q  498 ttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtcc 597  Q
    ||||||||| |||||| ||  ||||| || ||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||| ||| |||||    
T  6797529 ttgaattttaaaaaattggctaaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgtctatcaaaatggttcctccgtcc 6797628  T
Q  598 aaaagttccgttactggtgatgatgt 623  Q
    ||||| || ||||| |||||||||||    
T  6797629 aaaagctctgttacgggtgatgatgt 6797654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 475 - 623
Target Start/End: Original strand, 37020507 - 37020655
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| ||||  | ||||||||||||| ||||||||||||| || |||| ||||||||  |||||||| | |||||||||||||||| |||||||    
T  37020507 tgactaatacctcaaaatagtccttgaattttgaaaaatcggtcaattttgtccttgaattttttgaaatatcaaattagtccctgaattttgcagacgt 37020606  T
Q  575 ccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||   |||||| |||||||||  ||||||| | ||||||||||    
T  37020607 ccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 37020655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 474 - 565
Target Start/End: Original strand, 16376734 - 16376825
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| |||| || ||| ||||||||| |||||||||||||||| |||||||||||||  |||||| |||||||||||||||||||    
T  16376734 ttgactaatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaattt 16376825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 475 - 601
Target Start/End: Complemental strand, 6786126 - 6786000
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| ||||  | ||||||||||||| ||||||||| ||| || |||||| |||| |  |||||||| | ||||||||||||||||||||||||    
T  6786126 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtcccttaattatttgaaatatcaaattagtccctgaattttacagacgt 6786027  T
Q  575 ccatcaaaatggtcccttcgtccaaaa 601  Q
    ||||||||   |||||| |||||||||    
T  6786026 ccatcaaatcagtccctccgtccaaaa 6786000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 495 - 601
Target Start/End: Complemental strand, 24208167 - 24208061
Alignment:
Q  495 tccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcg 594  Q
    |||||||||||| ||||||||| ||| || ||||||||||| |  |||||||| | ||||||||||||||||||||||||||||||||   |||||| ||    
T  24208167 tccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccg 24208068  T
Q  595 tccaaaa 601  Q
    |||||||    
T  24208067 tccaaaa 24208061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 39663154 - 39663243
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| | || || ||||||||||||| |||||||||||||||| ||||||||||||||  ||||| |||||||||||||||||||    
T  39663154 gactaatacctaaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaattt 39663243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 494 - 558
Target Start/End: Original strand, 19906700 - 19906764
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccc 558  Q
    ||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  19906700 gtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccc 19906764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 494 - 623
Target Start/End: Original strand, 37645505 - 37645634
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    ||||||||||||| ||||||| ||| |||| |||| | ||||||  |||||||||||||||||| |||||||| |||| ||  |||||||| |||||| |    
T  37645505 gtccttgaatttttaaaaatcagtcgaattcgtccttaaattttaggaaatatctatttagtccttgaattttgcagatgtttatcaaaattgtccctcc 37645604  T
Q  594 gtccaaaagttccgttactggtgatgatgt 623  Q
    ||||| ||| || |||| || |||||||||    
T  37645605 gtccataagctctgttattgatgatgatgt 37645634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 474 - 565
Target Start/End: Complemental strand, 16764702 - 16764611
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| |||| || ||||||||||||| | ||||||| ||| || |||||||||||||| |||||||| | |||||||||||||||    
T  16764702 ttgactaatacctcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 16764611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 476 - 582
Target Start/End: Original strand, 19581414 - 19581520
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || |||||| |||||| ||||||| | |||||| |||||||||||||| ||||||||||||||||||  ||||||  || | |||    
T  19581414 gactaatacctcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtcctcgaatttaccaaatgtc 19581513  T
Q  576 catcaaa 582  Q
    |||||||    
T  19581514 catcaaa 19581520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 14387349 - 14387438
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||  |||||||| | |||||||||||||||    
T  14387349 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 14387438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 34400314 - 34400403
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| ||  |||||||||||||||||||||| ||||||  ||||||||||||| |||||| |||||| |||| |||||||    
T  34400314 gactaatacctcaaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaatagctattttgtccttgaattt 34400403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 494 - 599
Target Start/End: Original strand, 37417291 - 37417396
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    |||||||||||||||    |||| ||||||  ||||| |||| || |||||||| | |||||||||||||||  |||||||||||||||| |||||||||    
T  37417291 gtccttgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtcccttc 37417390  T
Q  594 gtccaa 599  Q
    ||||||    
T  37417391 gtccaa 37417396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 39456869 - 39456780
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||||||| ||  |||||||||||| |||||| ||| ||||| |||| |||||||||  ||||| |||||||||||||||||||    
T  39456869 gactaatacttcaaattcatccttgaattttaaaaaattggttaaattcgtccatgaattttgcaaaatagctatttagtccctgaattt 39456780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 474 - 566
Target Start/End: Complemental strand, 31475171 - 31475079
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaatttt 566  Q
    |||| |||||| |||| || || ||| |||||||||||||| |||||||| ||| |  |||||||||||||||||||||| ||||||||||||    
T  31475171 ttgagtaatacctcaacttcgttctttaattttcaaaaatcagtcaaattcgtcaccaaattttgagaaatatctatttaatccctgaatttt 31475079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 24205598 - 24205687
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| ||||  | ||||||||||||| ||||||||| ||| || |||||||||||||  |||||||| | |||||||||||||||    
T  24205598 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 24205687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 486 - 599
Target Start/End: Complemental strand, 29909774 - 29909661
Alignment:
Q  486 tcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatg 585  Q
    |||| ||||||| ||||||||||    |||| ||| || |||||| |||| || |||||||| ||||||||||| |||||  |||||||||||||||| |    
T  29909774 tcaaatttgtccctgaattttcacgcgtcggccaactttgtccctcaattatgcgaaatatcaatttagtcccttaatttgtcagacgtccatcaaaaag 29909675  T
Q  586 gtcccttcgtccaa 599  Q
    |||||| |||||||    
T  29909674 gtccctccgtccaa 29909661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 2577570 - 2577480
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| ||||  | ||||||||||||| ||||||||  ||| || |||||||||||||  |||||||| | |||||||||||||||    
T  2577570 tgactaatacctcaaaatagtccttgaattttgaaaaatcgtccaatttcgtccctgaattttttgaaatatcaaattagtccctgaattt 2577480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 475 - 565
Target Start/End: Original strand, 6783363 - 6783453
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| ||||  | ||||||||||||| ||||||||||||| || ||||||||||| |   ||||||| | |||||||||||||||    
T  6783363 tgactaatacctcaaaatagtccttgaattttaaaaaatcggtcaatttcgtccctgaattattcaaaatatcaaattagtccctgaattt 6783453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 513 - 599
Target Start/End: Original strand, 15432365 - 15432451
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaa 599  Q
    |||||||||||  ||||| |||| || |||||||| |||||||| ||||||||  |||||||||||||||| ||| | |||||||||    
T  15432365 tcggtcaaattcatccctcaattatgcgaaatatcaatttagtctctgaatttgtcagacgtccatcaaaaaggttcattcgtccaa 15432451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 37022275 - 37022185
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| ||||  | ||||||||||||| ||||||||  ||| || |||||||||||||  |||||||| | |||||||||||||||    
T  37022275 tgactaatacctcaaaatagtccttgaattttgaaaaatcgaccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 37022185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 497 - 566
Target Start/End: Complemental strand, 37646546 - 37646477
Alignment:
Q  497 cttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaatttt 566  Q
    |||||| ||||||||||| |||||||| ||||   |||| || |||||||||||||||||||||||||||    
T  37646546 cttgaactttcaaaaatcagtcaaattcgtcctcaaattctgcgaaatatctatttagtccctgaatttt 37646477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 40561967 - 40561878
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||| ||||||||| ||||||||| ||| || ||| |||||||||| |||||| | | |||||||||||||||    
T  40561967 gactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaattt 40561878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 474 - 566
Target Start/End: Complemental strand, 162165 - 162074
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaatttt 566  Q
    |||| |||||||||||||| ||| ||||||||||||||||| |||||||| | |||  ||||||   ||||||||||||||| | ||||||||    
T  162165 ttgagtaatacttcaatttcgtc-ttgaattttcaaaaatcagtcaaattcgaccccaaattttacaaaatatctatttagttcttgaatttt 162074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 565
Target Start/End: Complemental strand, 6799479 - 6799408
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||||| ||||||||| |||||| |||| |||||||||  ||||| |||||| |||| |||||||    
T  6799479 gtccttgaatttttaaaaatcggacaaattcgtccatgaattttgccaaatagctattttgtccttgaattt 6799408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 610
Target Start/End: Original strand, 7744099 - 7744177
Alignment:
Q  532 aattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgtta 610  Q
    ||||||| |||||||| |||| ||||||||||||  |  | ||||||||||||||||||| | |||||||| |||||||    
T  7744099 aattttgcgaaatatcaatttcgtccctgaatttctctcatgtccatcaaaatggtccctccatccaaaaggtccgtta 7744177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 610
Target Start/End: Original strand, 17946150 - 17946228
Alignment:
Q  532 aattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgtta 610  Q
    |||||||  ||||||| |||| ||||||||||||  |  | ||||||||||||||||||| |||||||||| |||||||    
T  17946150 aattttgcaaaatatcaattttgtccctgaatttctctcatgtccatcaaaatggtccctccgtccaaaaggtccgtta 17946228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 591
Target Start/End: Original strand, 41706576 - 41706654
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccct 591  Q
    ||||||||||| |||||| |||| || |||||||| ||||| |||||||||||  |  ||||||||||||| |||||||    
T  41706576 tcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcgaacgtccatcaaaaaggtccct 41706654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 552 - 605
Target Start/End: Complemental strand, 11315383 - 11315330
Alignment:
Q  552 tagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttc 605  Q
    |||| |||||||||  |||||||||||||||||||||||| |||||||| ||||    
T  11315383 tagttcctgaatttgtcagacgtccatcaaaatggtccctccgtccaaatgttc 11315330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 591
Target Start/End: Original strand, 15372509 - 15372614
Alignment:
Q  486 tcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatg 585  Q
    ||||||| |||| ||||||||||    |||| |||||| | |||| |||| ||  ||||||| ||||| |||||||||||  |||||||||||||||| |    
T  15372509 tcaatttagtccctgaattttcacgggtcggccaaattcgcccctcaattatgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaag 15372608  T
Q  586 gtccct 591  Q
    ||||||    
T  15372609 gtccct 15372614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 610
Target Start/End: Complemental strand, 39457 - 39387
Alignment:
Q  540 gaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgtta 610  Q
    |||||||| | |||||||||||||||  ||||||| |||||||| ||||||  |||||||  |||||||||    
T  39457 gaaatatcaacttagtccctgaatttgtcagacgttcatcaaaaaggtccccccgtccaagtgttccgtta 39387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 599
Target Start/End: Original strand, 39593 - 39679
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaa 599  Q
    |||| |||||| |||||| |||| || |||||||| ||||| |||||||||||  ||| |||| || |||| ||||||| |||||||    
T  39593 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcaggcgtcgattaaaaaggtccctccgtccaa 39679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 610
Target Start/End: Original strand, 42879393 - 42879489
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgtta 610  Q
    |||||||||||  ||||| |||| || |||| ||| | ||||||  |||||||  |||||||||||||||| ||||||| |||||||  |||||||||    
T  42879393 tcggtcaaattcatcccttaattatgcgaaa-atcaacttagtctatgaatttgtcagacgtccatcaaaaaggtccctccgtccaagtgttccgtta 42879489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 1e-49; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 476 - 620
Target Start/End: Complemental strand, 39859353 - 39859209
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || ||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  39859353 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtc 39859254  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    | |||||||||||||| |||||||||| ||||||| |||||||||    
T  39859253 cgtcaaaatggtccctccgtccaaaagctccgttagtggtgatga 39859209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 479 - 623
Target Start/End: Complemental strand, 24228530 - 24228386
Alignment:
Q  479 taatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccat 578  Q
    |||||| ||||||| || |||||||||| |||||| || |||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  24228530 taatacctcaatttcgttcttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattttacagacgtccat 24228431  T
Q  579 caaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||    
T  24228430 caaaatggtcccttcgtccaaaagctccattagtggtgatgatgt 24228386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 476 - 623
Target Start/End: Complemental strand, 38474267 - 38474120
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || ||||| ||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||| |    
T  38474267 gactaatacctcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcc 38474168  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
     ||||||||||||| | |||||||||| ||||||| ||||||||||||    
T  38474167 tatcaaaatggtccatccgtccaaaagctccgttagtggtgatgatgt 38474120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 476 - 620
Target Start/End: Original strand, 45359336 - 45359480
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| | || ||||||| |||||||| |||||||||||||||  |||| ||||||||| |||||||||||||||||| |||||||||||||||||    
T  45359336 gactaataccttaaatttgtccatgaattttaaaaaatcggtcaaatccgtccttgaattttgcgaaatatctatttagtccttgaattttacagacgtc 45359435  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||||||||| | |||||||| ||||||| |||||||||    
T  45359436 catcaaaatggtccctccatccaaaagctccgttagtggtgatga 45359480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 476 - 623
Target Start/End: Complemental strand, 37115650 - 37115503
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || ||| ||||||||| ||||||| |||||||| || |||||||||||  ||||||||||||||| |||||||||||||||||||    
T  37115650 gactaatacctcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagtacctgaattttacagacgtc 37115551  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||| |||||| |||||||||| ||||||| ||||||||||||    
T  37115550 catcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 37115503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 496 - 620
Target Start/End: Original strand, 6602355 - 6602479
Alignment:
Q  496 ccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgt 595  Q
    ||||||||||| |||||||||  ||| |  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6602355 ccttgaattttaaaaaatcggctaaacttatccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 6602454  T
Q  596 ccaaaagttccgttactggtgatga 620  Q
    ||||||| ||||||| |||||||||    
T  6602455 ccaaaagctccgttagtggtgatga 6602479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 475 - 623
Target Start/End: Complemental strand, 47386334 - 47386186
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| |||| || |||||| |||||| ||||||| |||||||| |||| ||||||||| ||||||| ||||||||| || ||||||||||||||    
T  47386334 tgactaatacctcaaattcgtcctttaattttaaaaaatcagtcaaattcgtccttgaattttgcgaaatatttatttagtctctaaattttacagacgt 47386235  T
Q  575 ccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||||||  | |||||||||| ||||||| ||||||||||||    
T  47386234 ccatcaaaatggtcattccgtccaaaagctccgttagtggtgatgatgt 47386186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 476 - 623
Target Start/End: Complemental strand, 30940549 - 30940402
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| | || ||||| |||||||||| ||||||||| |||||| ||| || ||||||  |||||||||||||||||||||||||||||| ||||     
T  30940549 gactaataccttaaatttgttcttgaattttaaaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattttacaaacgtt 30940450  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||||| || |||||||||| ||||||| ||||||||||||    
T  30940449 catcaaaatggtctctccgtccaaaagctccgttagtggtgatgatgt 30940402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 476 - 620
Target Start/End: Complemental strand, 29996638 - 29996494
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || ||||||||||||| ||||||||||||| || |||||||||||||| |||||||| | ||| |||||||||||||||||||||    
T  29996638 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttacagacgtc 29996539  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    ||||||| | |||||| | |||||||| ||||||| | |||||||    
T  29996538 catcaaattcgtccctccatccaaaaggtccgttaatagtgatga 29996494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 498 - 620
Target Start/End: Original strand, 13168142 - 13168267
Alignment:
Q  498 ttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccct---gaattttacagacgtccatcaaaatggtcccttcg 594  Q
    ||||||||| ||||||||| |||||| |||| ||||||||| ||||||||||||||||||||   |||||||||||||||||||||||||||||| | ||    
T  13168142 ttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctcctgaattttacagacgtccatcaaaatggtccatccg 13168241  T
Q  595 tccaaaagttccgttactggtgatga 620  Q
    |||||||| ||||||| |||||||||    
T  13168242 tccaaaagctccgttagtggtgatga 13168267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 479 - 610
Target Start/End: Complemental strand, 37796302 - 37796171
Alignment:
Q  479 taatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccat 578  Q
    |||||| |||| |||||||||||||||||||||||| | |||||| ||||   ||||||| ||||||||||||||||||||||||||||| |||||||||    
T  37796302 taatacctcaaatttgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgcgaaatatctatttagtccctgaattttacggacgtccat 37796203  T
Q  579 caaaatggtcccttcgtccaaaagttccgtta 610  Q
    |||||| |||||| |||||| ||| |||||||    
T  37796202 caaaatagtccctccgtccataagctccgtta 37796171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 474 - 620
Target Start/End: Complemental strand, 34777041 - 34776895
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    |||| |||||| |||| || || ||| |||||| |||||| || ||||||  | ||||||||||| ||||||||||||||||||||||||||||||||||    
T  34777041 ttgattaatacctcaaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtccctgaattttacagacg 34776942  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||||||||||| |||||||||  ||||||| || ||||||    
T  34776941 tccatcaaaatggtccctccgtccaaaaactccgttagtgatgatga 34776895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 474 - 623
Target Start/End: Complemental strand, 27666191 - 27666042
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    ||||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||| |||||||| | ||||||||||||||||||| |||    
T  27666191 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacg 27666092  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||||   |||||| ||||||||||  |||||| | ||||||||||    
T  27666091 tccatcaaatccgtccctccgtccaaaaggcccgttaatagtgatgatgt 27666042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 13169773 - 13169683
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| |||| || ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||    
T  13169773 tgactaatacctcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 13169683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 476 - 581
Target Start/End: Original strand, 56330 - 56435
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || ||||||||||||| |||||||||  || || |||||||||||||| |||||||| | |||||||||||||||||||||||||    
T  56330 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 56429  T
Q  576 catcaa 581  Q
    ||||||    
T  56430 catcaa 56435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 517 - 623
Target Start/End: Complemental strand, 35693455 - 35693347
Alignment:
Q  517 tcaaattagtccctgaattttgagaaatatctat--ttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgttactgg 614  Q
    ||||||| |||| ||||||||| | ||||||| |  ||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||| |||    
T  35693455 tcaaattcgtccttgaattttgcggaatatctctaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagttctgttagtgg 35693356  T
Q  615 tgatgatgt 623  Q
    |||||||||    
T  35693355 tgatgatgt 35693347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 467 - 623
Target Start/End: Original strand, 20478033 - 20478189
Alignment:
Q  467 tttaaagttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaatttt 566  Q
    |||||| | ||||||||| ||||  | ||||||||||||| ||||||||| ||| || || ||||||||||  |||||||| | ||||||||||||||||    
T  20478033 tttaaaatcgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtacctgaatttttcgaaatatcaaattagtccctgaatttt 20478132  T
Q  567 acagacgtccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
     |||||||||||||||   |||||| |||||||||  ||||||| | ||||||||||    
T  20478133 gcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 20478189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 474 - 565
Target Start/End: Complemental strand, 6605488 - 6605397
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||| |||||| |||| |||||||||||||||| |||||||||||||||| || ||||||||||| |||||| |||||||||||||||||||    
T  6605488 ttgattaatacctcaaatttgtccttgaattttaaaaaatcggtcaaatttgttcctgaattttgcgaaatagctatttagtccctgaattt 6605397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 474 - 565
Target Start/End: Original strand, 39857643 - 39857734
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||| |||||| |||| || ||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||    
T  39857643 ttgattaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaattt 39857734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 467 - 565
Target Start/End: Complemental strand, 35403717 - 35403619
Alignment:
Q  467 tttaaagttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||| ||||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||| |||||||| | |||||||||||||||    
T  35403717 tttaaatttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35403619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 37113941 - 37114030
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| |||||| |||||||||  ||||||||||||| |||||||||||||||||||| |||||    
T  37113941 gactaatacctcaaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaattt 37114030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 532 - 623
Target Start/End: Complemental strand, 48852415 - 48852324
Alignment:
Q  532 aattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||| ||  ||||||||| || |||| ||||||||||||    
T  48852415 aattttgcaaaatatctatttaatccttgaattttacagacgtccatcaaaatggtctctcggtccaaaagctctgttagtggtgatgatgt 48852324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 23904583 - 23904672
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| |||||||||||||||| ||| ||||||||||  ||||| ||||||||||| |||||||    
T  23904583 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtctctgaattttgcaaaatagctatttagtccatgaattt 23904672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 494 - 566
Target Start/End: Complemental strand, 13039713 - 13039641
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaatttt 566  Q
    |||||||||||||||||||||  ||||||| |||||| ||||||| |||||| ||||||||||||||||||||    
T  13039713 gtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaatttt 13039641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 477 - 565
Target Start/End: Original strand, 24226582 - 24226670
Alignment:
Q  477 actaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||| |||| || ||||||||||||||||||||||| |||||| |||| ||||||||| |||||| |||||| |||| |||||||    
T  24226582 actaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattttgtccttgaattt 24226670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 474 - 565
Target Start/End: Complemental strand, 22155938 - 22155847
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| | || || ||||||||||||||||||||||| |||||| |||| |||||||||  ||||| |||||| ||||||||||||    
T  22155938 ttgactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaattt 22155847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 474 - 565
Target Start/End: Complemental strand, 22211853 - 22211762
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| | || || ||||||||||||||||||||||| |||||| |||| |||||||||  ||||| |||||| ||||||||||||    
T  22211853 ttgactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaattt 22211762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 513 - 599
Target Start/End: Complemental strand, 33038884 - 33038798
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaa 599  Q
    |||||||||||  ||||| |||| || |||||||| | |||||||||||||||| |||||||||||||||| ||||||| |||||||    
T  33038884 tcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtccatcaaaaaggtccctccgtccaa 33038798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 479 - 565
Target Start/End: Complemental strand, 48228027 - 48227941
Alignment:
Q  479 taatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||| |||| || ||| ||||||||| |||||||||||||||| |||  ||||||||| ||||||||||||| ||||||||||||    
T  48228027 taatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtctttgaattttgcgaaatatctattttgtccctgaattt 48227941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 480 - 565
Target Start/End: Original strand, 35691431 - 35691516
Alignment:
Q  480 aatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||| |||| || |||||||||||||||||||||||||||||| ||| || ||||||| |||||| |||||| |||| |||||||    
T  35691431 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtctctaaattttgcgaaatagctattttgtccttgaattt 35691516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 20479809 - 20479719
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| ||||  | ||||||||||||| ||||||||| ||| || |||||||||||||  |||||||| | |||||||||||||||    
T  20479809 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 20479719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 554 - 620
Target Start/End: Complemental strand, 23906307 - 23906241
Alignment:
Q  554 gtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||| |||||||||| |||||||||||||||||||| |||||||||| ||||||| ||| |||||    
T  23906307 gtccctaaattttacagtcgtccatcaaaatggtccctccgtccaaaagctccgttaatggcgatga 23906241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 479 - 565
Target Start/End: Original strand, 27664433 - 27664519
Alignment:
Q  479 taatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||| |||| || ||||||||||||| ||||||||| ||| || ||||||||||||||  ||||||| | |||||||||||||||    
T  27664433 taatacctcaaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaattt 27664519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 35401969 - 35402058
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||  |||| || ||||||||||||| |||||||||  || || |||||||||||||| |||||||| | |||||||||||||||    
T  35401969 gactaatatctcaaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35402058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 553
Target Start/End: Original strand, 38549547 - 38549624
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctattta 553  Q
    ||||||||| | || || ||||||||||||||||||||| | ||| || |||||||||||||| ||||||||||||||    
T  38549547 gactaataccttaaattcgtccttgaattttcaaaaatcagccaagttcgtccctgaattttgtgaaatatctattta 38549624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 46437107 - 46437196
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||||||||||| | |||||| |||  ||||||||| |||||| |||||| |||| |||||||    
T  46437107 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtcgttgaattttgcgaaatagctattttgtccttgaattt 46437196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 47384294 - 47384383
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||  | |||||| |||| ||||||||| |||||||||| |||||||| ||||||    
T  47384294 gactaatacctcaaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaattt 47384383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 513 - 599
Target Start/End: Original strand, 2167516 - 2167602
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaa 599  Q
    |||||||||||  ||||| |||| || |||||||| | |||||||||||||||  |||||| ||||||||| ||||||| |||||||    
T  2167516 tcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgcccatcaaaaaggtccctccgtccaa 2167602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 78103 - 78014
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||| ||||||||| ||||||||| ||| || ||||||||||||||  ||||||| | || ||||||||||||    
T  78103 gactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaattt 78014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 34774998 - 34775087
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||  |||| || ||| ||||||||| ||||||||||||||||  | | |||||||||  ||||| |||||||||||||||||||    
T  34774998 gactaatatctcaaattcgtctttgaattttaaaaaatcggtcaaattcattcatgaattttgcaaaatagctatttagtccctgaattt 34775087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 495 - 599
Target Start/End: Original strand, 13018052 - 13018158
Alignment:
Q  495 tccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatat--ctatttagtccctgaattttacagacgtccatcaaaatggtccctt 592  Q
    |||||||||||| ||||||| | |||||| ||||   ||||| | |||||||  ||||||  || |||||||| ||| |||||||||||||||||||||     
T  13018052 tccttgaattttaaaaaatcagccaaattcgtcctcaaatttagcgaaatatatctatttcatctctgaatttaacatacgtccatcaaaatggtccctc 13018151  T
Q  593 cgtccaa 599  Q
    |||||||    
T  13018152 cgtccaa 13018158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 610
Target Start/End: Original strand, 1546343 - 1546421
Alignment:
Q  532 aattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgtta 610  Q
    ||||||| |||||||| |||  |||| |||||||  |  ||||||||||||||||||||| |||||||||| |||||||    
T  1546343 aattttgcgaaatatcaattgcgtccttgaatttctctcacgtccatcaaaatggtccctccgtccaaaaggtccgtta 1546421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 599
Target Start/End: Complemental strand, 46996777 - 46996703
Alignment:
Q  525 gtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaa 599  Q
    |||||| |||| || |||||||| | |||||| ||||||||  |||||||||||||||| ||||||| |||||||    
T  46996777 gtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 46996703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 591
Target Start/End: Complemental strand, 8423363 - 8423290
Alignment:
Q  518 caaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccct 591  Q
    |||||| |||||| |||| || |||||||| ||||| |||||||||||  |||||||| ||||||| |||||||    
T  8423363 caaatttgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtcaatcaaaaaggtccct 8423290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 591
Target Start/End: Complemental strand, 35344372 - 35344299
Alignment:
Q  518 caaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccct 591  Q
    |||||| |||||| |||| || |||||||| ||||| |||||||||||   ||||||||||||||| |||||||    
T  35344372 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttataagacgtccatcaaaaaggtccct 35344299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 511 - 599
Target Start/End: Original strand, 366733 - 366821
Alignment:
Q  511 aatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaa 599  Q
    |||| |||||||| |||||| | ||||  |||||||| | ||||||||||||||| ||||||||| |||||| |  ||||| |||||||    
T  366733 aatcagtcaaatttgtccctcagttttttgaaatatcaaattagtccctgaatttaacagacgtctatcaaattcatccctccgtccaa 366821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 562
Target Start/End: Complemental strand, 45361367 - 45361279
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaa 562  Q
    ||||||||||| |||| ||  |||||||||||| |||||| |||||| || || |||||||||||  |||||  |||||||||| ||||    
T  45361367 ttgactaatacctcaaattcttccttgaattttaaaaaatgggtcaattttgttcctgaattttgcaaaatagttatttagtccttgaa 45361279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 536
Target Start/End: Original strand, 29994907 - 29994966
Alignment:
Q  477 actaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattt 536  Q
    |||||||| |||| || ||||||||||||| ||||||||| ||| || ||||||||||||    
T  29994907 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattt 29994966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 559
Target Start/End: Complemental strand, 46439622 - 46439539
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccct 559  Q
    ||||||||  |||| || ||| ||||||||| |||||||| ||||| | |||  | ||||||| ||||||||||||||||||||    
T  46439622 gactaatatctcaaattcgtcattgaatttttaaaaatcgatcaaacttgtctttaaattttgcgaaatatctatttagtccct 46439539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 565
Target Start/End: Original strand, 46810723 - 46810794
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||| ||||||||||   ||||| ||||||||||||| |||| || |||||||| ||||| |||||||||||    
T  46810723 gtccctgaattttcacggatcggccaaattagtccctcaattatgcgaaatatcaatttaatccctgaattt 46810794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 565
Target Start/End: Complemental strand, 36756951 - 36756885
Alignment:
Q  499 tgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||   ||||||||||||||||||| |||| || |||||||| ||||| || ||||||||    
T  36756951 tgaattttcatggatcggtcaaattagtccctcaattatgtgaaatatcaatttaatcgctgaattt 36756885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 565
Target Start/End: Complemental strand, 36766475 - 36766409
Alignment:
Q  499 tgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||   ||||||||||||||||||| |||| || |||||||| ||||| || ||||||||    
T  36766475 tgaattttcatggatcggtcaaattagtccctcaattatgtgaaatatcaatttaatcgctgaattt 36766409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 494 - 588
Target Start/End: Complemental strand, 46812688 - 46812594
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtc 588  Q
    ||||||||||||| |  | |||| ||||||  ||||| ||||  | |||||||| ||||||||||| |||||  |||||||||||||||| ||||    
T  46812688 gtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgtcagacgtccatcaaaaaggtc 46812594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 537
Target Start/End: Complemental strand, 23906356 - 23906295
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaatttt 537  Q
    ||||||||| |||| ||  |||||||||||| ||||||||| |||||| |||||| ||||||    
T  23906356 gactaatacctcaaattcctccttgaattttaaaaaatcggccaaattcgtccctaaatttt 23906295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 554 - 598
Target Start/End: Complemental strand, 31915084 - 31915040
Alignment:
Q  554 gtccctgaattttacagacgtccatcaaaatggtcccttcgtcca 598  Q
    |||||||||||| ||| |||||||||||||| |||||| ||||||    
T  31915084 gtccctgaatttaacaaacgtccatcaaaatagtccctacgtcca 31915040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 610
Target Start/End: Original strand, 45463680 - 45463804
Alignment:
Q  486 tcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatg 585  Q
    ||||||| |||| ||||||||||    |||| |||||| |||||| |||||   |||||||| |  ||||||||||||||    ||||||||||||  |     
T  45463680 tcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 45463779  T
Q  586 gtcccttcgtccaaaagttccgtta 610  Q
    |||||| |||||||||| |||||||    
T  45463780 gtccctccgtccaaaaggtccgtta 45463804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 2e-47; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 479 - 623
Target Start/End: Complemental strand, 41761867 - 41761723
Alignment:
Q  479 taatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccat 578  Q
    |||||| |||| || ||||||||||||||||||||||| |||||| |||||  ||||||| |||||||||||||||||||||||||||||||||||||||    
T  41761867 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41761768  T
Q  579 caaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||||| |||||||||| | ||||| ||||||||||||    
T  41761767 caaaatggtccctccgtccaaaagcttcgttagtggtgatgatgt 41761723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 475 - 623
Target Start/End: Original strand, 41781538 - 41781686
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgt 574  Q
    |||||||||| |||| ||||| |||||||||| |||||||||||||||| ||||||||||||||  |||||| ||||||||||||||||||||||||| |    
T  41781538 tgactaatacctcaaatttgttcttgaattttaaaaaatcggtcaaatttgtccctgaattttgcaaaatatttatttagtccctgaattttacagacat 41781637  T
Q  575 ccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||||||||| |||||||||| ||||||| || |||||||||    
T  41781638 ccatcaaaatggtccctccgtccaaaagctccgttagtgatgatgatgt 41781686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 477 - 623
Target Start/End: Original strand, 49523125 - 49523271
Alignment:
Q  477 actaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtcc 576  Q
    |||||||| |||| || ||| ||||||||| |||||||||  ||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||| |    
T  49523125 actaatacctcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttc 49523224  T
Q  577 atcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||||||| |||||||||  ||||||| ||||||||||||    
T  49523225 atcaaaatggtccctccgtccaaaaaatccgttagtggtgatgatgt 49523271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 476 - 623
Target Start/End: Original strand, 48813787 - 48813934
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || ||||||||||||||||||||| | ||||||  |||||||||||||  |||||| |||||||| ||||||||||| |||||||    
T  48813787 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaatttatccctgaattttgcaaaatatatatttagttcctgaattttatagacgtc 48813886  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||||||||||||||||||| || |||  ||||||||||||    
T  48813887 catcaaaatggtcccttcgtccaaaagctctgttggtggtgatgatgt 48813934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 476 - 620
Target Start/End: Original strand, 51011926 - 51012070
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||  |||| || ||||||||||||| ||||||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  51011926 gactaatatctcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattttacagacgtc 51012025  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||||||||| |||||||||| || |||| | |||||||    
T  51012026 catcaaaatggtccctccgtccaaaagctctgttagtagtgatga 51012070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 474 - 620
Target Start/End: Complemental strand, 52868275 - 52868129
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    |||||||||| ||| ||||  |||||||||||| |||||||||||||||| |||  | ||||||| ||||||||||||||||| |||||||| |||||||    
T  52868275 ttgactaatatttcgatttcctccttgaattttaaaaaatcggtcaaattcgtctataaattttgcgaaatatctatttagtctctgaatttaacagacg 52868176  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
     | |||||||||||| ||||||||||||| ||||||| ||| |||||    
T  52868175 cctatcaaaatggtcacttcgtccaaaagctccgttagtggcgatga 52868129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 474 - 623
Target Start/End: Original strand, 42980627 - 42980782
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcg------gtcaaattagtccctgaattttgagaaatatctatttagtccctgaatttta 567  Q
    |||||||||||||||| | |||||||||||||| ||||| ||      | |||||| |||| ||||||||  ||||| |||||||||||||| |||||||    
T  42980627 ttgactaatacttcaaatgtgtccttgaatttttaaaaaacgaccaaggccaaatttgtccatgaattttacgaaatttctatttagtcccttaatttta 42980726  T
Q  568 cagacgtccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||||||||||||||||||| |||||||||| || |||| ||||||||||||    
T  42980727 cagacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 42980782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 476 - 623
Target Start/End: Original strand, 43519424 - 43519571
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtc 575  Q
    ||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||| |||||||| | ||||||||||||||||||| |||||    
T  43519424 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtc 43519523  T
Q  576 catcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    |||||||   |||||| |||||||||| ||| ||| | ||||||||||    
T  43519524 catcaaatccgtccctccgtccaaaaggtccattaatagtgatgatgt 43519571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 495 - 623
Target Start/End: Complemental strand, 48646852 - 48646724
Alignment:
Q  495 tccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcg 594  Q
    ||||||||||||||||| || |  ||||| |||| ||||||| | ||||||||||||||||||||||||||||||||| | |||||||||||||| | ||    
T  48646852 tccttgaattttcaaaagtcagctaaattcgtccttgaatttagcgaaatatctatttagtccctgaattttacagaccttcatcaaaatggtccttccg 48646753  T
Q  595 tccaaaagttccgttactggtgatgatgt 623  Q
    |||||||| | ||||| ||||||||||||    
T  48646752 tccaaaagcttcgttagtggtgatgatgt 48646724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 497 - 620
Target Start/End: Complemental strand, 35404548 - 35404425
Alignment:
Q  497 cttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtc 596  Q
    |||||||||| |||||||||  ||||| |||| | ||||||| ||||||| |||||| ||||||||||||||||||||||| ||||||||||| | ||||    
T  35404548 cttgaattttaaaaaatcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtccaacaaaatggtccatccgtc 35404449  T
Q  597 caaaagttccgttactggtgatga 620  Q
    |||||| ||||||| |||||||||    
T  35404448 caaaagctccgttagtggtgatga 35404425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 472 - 565
Target Start/End: Original strand, 35401745 - 35401838
Alignment:
Q  472 agttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||||| |||| || ||||||||||||| ||||||||| |||||| |||||||||||||| |||||||||||||||||| |||||||    
T  35401745 agttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaattt 35401838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 49524823 - 49524733
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| |||| || ||||||||||||| |||||||||||||||| ||||||||||||||  ||||| |||||||||||||||||||    
T  49524823 tgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaattt 49524733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 479 - 565
Target Start/End: Original strand, 39345567 - 39345653
Alignment:
Q  479 taatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||| ||||| || ||||||||||||| ||||||||| |||||| |||||||||||||| |||||| |||||||||||||||||||    
T  39345567 taatatttcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaattt 39345653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 476 - 557
Target Start/End: Original strand, 48645255 - 48645336
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtcc 557  Q
    ||||||||| |||| || ||||||||||||||||||||| |||||||| |||| ||||||||| ||||||||||||||||||    
T  48645255 gactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccatgaattttgcgaaatatctatttagtcc 48645336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 467 - 565
Target Start/End: Complemental strand, 4173838 - 4173740
Alignment:
Q  467 tttaaagttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||| ||| ||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||| |||||||| | |||||||||||||||    
T  4173838 tttatagtggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 4173740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 497 - 591
Target Start/End: Original strand, 11601692 - 11601785
Alignment:
Q  497 cttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccct 591  Q
    |||||||||||||||||| ||||||||  ||||  |||||||  |||||| |||| |||||||||||||||||||||||||||||||| ||||||    
T  11601692 cttgaattttcaaaaatcagtcaaatttatccccaaattttgcaaaatatatatt-agtccctgaattttacagacgtccatcaaaatagtccct 11601785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 475 - 565
Target Start/End: Original strand, 43507166 - 43507256
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||| |||||||| | |||||||||||||||    
T  43507166 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43507256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 319273 - 319362
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||||||| || |||||||||||||| |||||||| | ||||| |||||||||    
T  319273 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaattt 319362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 43508742 - 43508653
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||| |||||||| | |||||||||||||||    
T  43508742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43508653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 486 - 591
Target Start/End: Complemental strand, 44794874 - 44794769
Alignment:
Q  486 tcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatg 585  Q
    ||||||| |||| |||||||||| |  ||||||||||| |||||| |||| || |||||||| ||||| |||||||||||  |||||||||||||||| |    
T  44794874 tcaatttagtccctgaattttcacacgtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaag 44794775  T
Q  586 gtccct 591  Q
    ||||||    
T  44794774 gtccct 44794769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 479 - 623
Target Start/End: Complemental strand, 2693373 - 2693230
Alignment:
Q  479 taatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccat 578  Q
    |||||| |||| || ||| ||||||||| ||||||| | ||||||  | ||| ||||||| |||||||||||||||||  ||||||||| | | ||||||    
T  2693373 taatacctcaacttcgtctttgaattttaaaaaatcagccaaatttattcctaaattttgcgaaatatctatttagtctttgaatttta-aaatgtccat 2693275  T
Q  579 caaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||||| | |||||| ||||||| ||| || |||||||||    
T  2693274 caaaatggtccatccgtccataagttccattagtgatgatgatgt 2693230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 472 - 566
Target Start/End: Original strand, 20819981 - 20820075
Alignment:
Q  472 agttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaatttt 566  Q
    |||| |||||||| |||| || ||||||||||||||||||||| ||||||||  | ||| |||||||  |||||| |||||||||||||||||||    
T  20819981 agttcactaatacctcaacttcgtccttgaattttcaaaaatcagtcaaatttattcctaaattttgcaaaatatttatttagtccctgaatttt 20820075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 51013976 - 51013886
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| |||| || ||||||||||||| ||||||||||||| || ||||||||||||||  ||||||| | | |||||||||||||    
T  51013976 tgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaatgagtccctgaattt 51013886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 33264382 - 33264471
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| ||||||||||||| || ||||||||||||||  ||||||| | ||||| |||||||||    
T  33264382 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaattt 33264471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 473 - 565
Target Start/End: Complemental strand, 42982544 - 42982452
Alignment:
Q  473 gttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||||| | || ||| |||||||||||| ||||||| |||||||| |||||||||||||| ||||||  ||||| |||| |||||||    
T  42982544 gttgactaatacgttaaatttttccttgaatttttaaaaatctgtcaaattcgtccctgaattttgcgaaatagttattttgtccttgaattt 42982452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 475 - 565
Target Start/End: Original strand, 20493826 - 20493916
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| |||| || ||| ||||||||| ||| ||||| |||||| || | ||||||||| |||||||||||||||| |||||||||    
T  20493826 tgactaatacctcaaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaattt 20493916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 513 - 599
Target Start/End: Original strand, 35996100 - 35996186
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaa 599  Q
    ||||||||||| |||||| |||| ||  ||||||| ||||| |||||||||||  |||||||||||||||| ||||||| |||||||    
T  35996100 tcggtcaaattcgtccctcaattgtgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgtccaa 35996186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 565
Target Start/End: Original strand, 4169686 - 4169775
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| |||||| | |||| || ||| |||||||||| |||||||| | |||||||||||||||    
T  4169686 gactaatacctcaaattcgtccttgaattttgaaaaattgatcaatttcgtctctgaattttgcgaaatatcaaattagtccctgaattt 4169775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 513 - 591
Target Start/End: Complemental strand, 10372793 - 10372715
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccct 591  Q
    |||| ||||||||||||| |||| || |||||||| ||||  |||||||||||  |||||||||||||||| |||||||    
T  10372793 tcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgtcagacgtccatcaaaaaggtccct 10372715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 513 - 591
Target Start/End: Original strand, 47941848 - 47941926
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccct 591  Q
    ||||||||||| ||| || |||| || |||||||| ||||| |||||||||||  |||||||||||||||| |||||||    
T  47941848 tcggtcaaattcgtctctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccct 47941926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 497 - 566
Target Start/End: Original strand, 2691394 - 2691463
Alignment:
Q  497 cttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaatttt 566  Q
    |||||||||||||||||| | |||||| ||||   |||||||  ||||||||||||||||||||||||||    
T  2691394 cttgaattttcaaaaatcagccaaattcgtccacaaattttgcaaaatatctatttagtccctgaatttt 2691463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 494 - 599
Target Start/End: Complemental strand, 44558599 - 44558494
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    |||||||||||||||    |||| ||||||  ||||| |||| || |||||||| | |||||||||||||||  |||||||||||||||| ||||| | |    
T  44558599 gtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccttcc 44558500  T
Q  594 gtccaa 599  Q
    ||||||    
T  44558499 gtccaa 44558494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 562
Target Start/End: Complemental strand, 320990 - 320903
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaa 562  Q
    |||||||||| |||| || ||||||||||||| ||||||||| ||| ||  ||| ||||||||| |||||||| | ||||||| ||||    
T  320990 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccttgaa 320903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 474 - 565
Target Start/End: Original strand, 833221 - 833312
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| ||||  | ||||||||||||| ||||||||| ||| || ||||||||||| |  |||||||| |  ||||||||||||||    
T  833221 ttgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 833312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 599
Target Start/End: Original strand, 2827453 - 2827527
Alignment:
Q  525 gtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaa 599  Q
    |||||| |||| || |||||||| | ||||||| |||||||  |||||||||||||||| ||||||| |||||||    
T  2827453 gtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 2827527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 5439737 - 5439647
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| ||||  | ||||||||||||| ||||||||| ||| || ||||||||||| |  |||||||| |  ||||||||||||||    
T  5439737 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 5439647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 591
Target Start/End: Original strand, 10762618 - 10762696
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccct 591  Q
    |||| ||||||||||||| |||| || ||||| || ||||  |||||||||||  |||||||||||||||| |||||||    
T  10762618 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaaggtccct 10762696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 33266099 - 33266010
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||  |||| || || |||||||||| |||||||||  || || || ||||||||||| |||||||| | |||||||||||||||    
T  33266099 gactaatatctcaaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaattt 33266010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 495 - 599
Target Start/End: Original strand, 7149558 - 7149662
Alignment:
Q  495 tccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttcg 594  Q
    |||||||||||||||||||| | | ||||  ||  | ||||||| ||||||| |||||  ||| ||||||| ||| | ||| ||||||||||||||| ||    
T  7149558 tccttgaattttcaaaaatcagccgaattcatctttaaattttgcgaaatatttatttcatccttgaatttaacataggtcaatcaaaatggtccctccg 7149657  T
Q  595 tccaa 599  Q
    |||||    
T  7149658 tccaa 7149662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 565
Target Start/End: Complemental strand, 43521193 - 43521109
Alignment:
Q  481 atacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||| |||| ||||| |||||||||| ||||||| ||||| || ||   ||||||||| |||||||| | |||||||||||||||    
T  43521193 atacctcaaatttgttcttgaattttgaaaaatcagtcaatttcgtttttgaattttgcgaaatatcaaattagtccctgaattt 43521109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 513 - 565
Target Start/End: Original strand, 44556657 - 44556709
Alignment:
Q  513 tcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||||||||||| |||| || |||||||| ||||||||| |||||||    
T  44556657 tcggtcaaattagtccctcaattatgtgaaatatcaatttagtccatgaattt 44556709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 557
Target Start/End: Complemental strand, 54387952 - 54387890
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtcc 557  Q
    |||||| |||||| ||||||| | ||||||||| ||| ||||||| ||||||||||||||||||    
T  54387952 gtccttaaatttttaaaaatcagccaaattagttcct-aattttgcgaaatatctatttagtcc 54387890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 835132 - 835042
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| ||||  | ||||||||||||| ||||||||  ||| || ||||||||||| |  |||||||| |  ||||||||||||||    
T  835132 tgactaatacctcaaaatagtccttgaattttgaaaaatcgaccaattttgtccctgaattattcgaaatatcaaaatagtccctgaattt 835042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 565
Target Start/End: Original strand, 5437810 - 5437900
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| ||||  | ||||||||||||| |||||||||  || || ||||||||||| |  |||||||| |  ||||||||||||||    
T  5437810 tgactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 5437900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 565
Target Start/End: Original strand, 11254118 - 11254208
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||| ||||| |||| || ||||||||||||| ||||||||| |||||  ||| || ||||||| |||||| || ||| |||| |||||||    
T  11254118 tgacaaatacctcaaattcgtccttgaatttttaaaaatcggccaaatccgtctctaaattttgcgaaatagctcttttgtccttgaattt 11254208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 552 - 600
Target Start/End: Complemental strand, 13451028 - 13450980
Alignment:
Q  552 tagtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaa 600  Q
    |||||| |||||||  |||||||||||||||||||||||| | ||||||    
T  13451028 tagtccttgaatttatcagacgtccatcaaaatggtccctccatccaaa 13450980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 540 - 588
Target Start/End: Original strand, 27624870 - 27624918
Alignment:
Q  540 gaaatatctatttagtccctgaattttacagacgtccatcaaaatggtc 588  Q
    |||||||| | |||||||||||||||  |||||||||||||||| ||||    
T  27624870 gaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtc 27624918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 610
Target Start/End: Original strand, 39083649 - 39083773
Alignment:
Q  486 tcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatg 585  Q
    ||||||| |||| ||||||||||    |||| |||||| |||||| |||||   |||||||| |  ||||||||||||||    ||||||||||||  |     
T  39083649 tcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 39083748  T
Q  586 gtcccttcgtccaaaagttccgtta 610  Q
    |||||| |||||||||| |||||||    
T  39083749 gtccctccgtccaaaaggtccgtta 39083773  T

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Target: scaffold1454 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 494 - 620
Target Start/End: Original strand, 1281 - 1407
Alignment:
Q  494 gtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcccttc 593  Q
    ||||||||||||| |||||| ||| ||||| |||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  1281 gtccttgaattttaaaaaattggttaaattcgtccatgaattttatgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctcc 1380  T
Q  594 gtccaaaagttccgttactggtgatga 620  Q
    ||||||||| ||||||| |||||||||    
T  1381 gtccaaaagctccgttagtggtgatga 1407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 86; Significance: 9e-41; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 474 - 623
Target Start/End: Original strand, 3292 - 3441
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    ||||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||| |||||||| | |||||||||||||||||||||||    
T  3292 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacg 3391  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||| | |||||| |||||||||| ||||||| | ||||||||||    
T  3392 tccatcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 3441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 474 - 623
Target Start/End: Original strand, 4464 - 4613
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacg 573  Q
    ||||||||||| |||| || ||||||||||||| ||||||||| ||| || |||||||||||||| |||||||| | |||||||||||||||||||||||    
T  4464 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacg 4563  T
Q  574 tccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgatgt 623  Q
    ||||||||| | |||||| |||||||||| ||||||| | ||||||||||    
T  4564 tccatcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 4613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 474 - 565
Target Start/End: Complemental strand, 14434 - 14343
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| |||| || ||||||||||||| |||||||||  || || |||||||||||||| |||||||| | |||||||||||||||    
T  14434 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 14343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 478 - 620
Target Start/End: Original strand, 8264 - 8404
Alignment:
Q  478 ctaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtcca 577  Q
    ||||||| |||| || ||||||||||||| |||||| || |||||| || | |||||||||  ||||||||||||||||||||||||||  | |||||||    
T  8264 ctaatacctcaaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtccctgaatttt--atacgtcca 8361  T
Q  578 tcaaaatggtcccttcgtccaaaagttccgttactggtgatga 620  Q
    |||||||||| | | |||||||||| | ||||| |||||||||    
T  8362 tcaaaatggtacatccgtccaaaagcttcgttagtggtgatga 8404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 1644 - 1555
Alignment:
Q  476 gactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||| |||| || ||||||||||||| |||||||||||||||| ||||||||||||||| ||||| | |||||||||||||||||    
T  1644 gactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaattt 1555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 54348 - 54258
Alignment:
Q  475 tgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    |||||||||| ||||  | ||||||||||||| ||||||||||||| || |||||||||||||  |||||||| | |||||||||||||||    
T  54348 tgactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 54258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 486 - 591
Target Start/End: Complemental strand, 6748 - 6643
Alignment:
Q  486 tcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattttacagacgtccatcaaaatg 585  Q
    ||||||| |||| ||||||||||    |||| |||||| |||||| |||| || |||||||| ||||| |||||||||||  ||||| |||||||||| |    
T  6748 tcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctccatcaaaaag 6649  T
Q  586 gtccct 591  Q
    ||||||    
T  6648 gtccct 6643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 565
Target Start/End: Original strand, 980 - 1071
Alignment:
Q  474 ttgactaatacttcaattttgtccttgaattttcaaaaatcggtcaaattagtccctgaattttgagaaatatctatttagtccctgaattt 565  Q
    ||||||||||| ||||  | ||||||||||||| |||||||||  || || ||||||||||| |  |||||||| |  ||||||||||||||    
T  980 ttgactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 1071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 554 - 621
Target Start/End: Original strand, 37282 - 37349
Alignment:
Q  554 gtccctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagttccgttactggtgatgat 621  Q
    |||| ||||||||||||||||| |||||||||||  || | |||||||  ||||||| ||||||||||    
T  37282 gtccatgaattttacagacgtctatcaaaatggtttctccatccaaaaactccgttaatggtgatgat 37349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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