View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13555_high_19 (Length: 246)

Name: NF13555_high_19
Description: NF13555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13555_high_19
NF13555_high_19
[»] chr5 (39 HSPs)
chr5 (131-197)||(1063301-1063367)
chr5 (196-246)||(41180309-41180359)
chr5 (196-246)||(5259379-5259429)
chr5 (197-246)||(5259481-5259530)
chr5 (197-246)||(41180208-41180257)
chr5 (197-245)||(7738407-7738455)
chr5 (11-65)||(1063434-1063488)
chr5 (197-246)||(18033350-18033399)
chr5 (196-246)||(14772542-14772592)
chr5 (197-246)||(26141851-26141900)
chr5 (194-246)||(11795728-11795780)
chr5 (196-246)||(10437733-10437783)
chr5 (197-246)||(71254-71303)
chr5 (195-239)||(18033458-18033502)
chr5 (196-227)||(3851478-3851509)
chr5 (196-227)||(6763812-6763843)
chr5 (196-239)||(20518166-20518208)
chr5 (196-227)||(23914835-23914866)
chr5 (196-227)||(23914956-23914987)
chr5 (192-227)||(25772144-25772179)
chr5 (196-227)||(26300105-26300136)
chr5 (197-227)||(1996842-1996872)
chr5 (197-227)||(1996963-1996993)
chr5 (196-246)||(13356233-13356283)
chr5 (196-246)||(15549421-15549471)
chr5 (196-226)||(20019864-20019894)
chr5 (196-226)||(25772271-25772301)
chr5 (197-227)||(27314470-27314500)
chr5 (197-234)||(7306544-7306581)
chr5 (197-246)||(9707135-9707184)
chr5 (197-226)||(13311170-13311199)
chr5 (197-234)||(16441608-16441645)
chr5 (194-227)||(25408535-25408568)
chr5 (201-246)||(25792942-25792987)
chr5 (197-246)||(26141750-26141799)
chr5 (190-227)||(43446847-43446884)
chr5 (190-227)||(43447483-43447520)
chr5 (195-227)||(19531294-19531326)
chr5 (192-228)||(38835640-38835676)
[»] chr8 (27 HSPs)
chr8 (193-246)||(31505029-31505082)
chr8 (196-246)||(31505134-31505184)
chr8 (195-246)||(31810430-31810481)
chr8 (195-246)||(13496428-13496479)
chr8 (197-246)||(24053592-24053641)
chr8 (197-246)||(1744227-1744276)
chr8 (195-239)||(40098753-40098797)
chr8 (196-246)||(31810328-31810378)
chr8 (197-238)||(10934598-10934639)
chr8 (197-246)||(10934699-10934748)
chr8 (197-246)||(27518411-27518460)
chr8 (197-246)||(41387858-41387907)
chr8 (199-246)||(13290032-13290079)
chr8 (191-246)||(15037739-15037794)
chr8 (196-227)||(40098875-40098906)
chr8 (197-227)||(1739680-1739710)
chr8 (197-246)||(2116100-2116150)
chr8 (197-227)||(9056136-9056166)
chr8 (204-246)||(12736357-12736399)
chr8 (196-238)||(13496539-13496581)
chr8 (197-227)||(14381233-14381263)
chr8 (193-246)||(7484713-7484766)
chr8 (197-246)||(10117066-10117115)
chr8 (194-226)||(17087347-17087379)
chr8 (196-232)||(29451725-29451761)
chr8 (199-239)||(33574890-33574930)
chr8 (194-226)||(42749047-42749079)
[»] chr6 (24 HSPs)
chr6 (193-246)||(6560648-6560701)
chr6 (197-246)||(31398221-31398270)
chr6 (194-246)||(18097156-18097208)
chr6 (197-246)||(8145943-8145993)
chr6 (196-246)||(8146045-8146095)
chr6 (197-246)||(2988794-2988843)
chr6 (197-246)||(6560753-6560802)
chr6 (195-239)||(17773604-17773648)
chr6 (194-246)||(31996595-31996647)
chr6 (192-227)||(21506453-21506488)
chr6 (204-246)||(16199122-16199164)
chr6 (197-246)||(14310516-14310565)
chr6 (197-246)||(14310617-14310666)
chr6 (197-246)||(28555043-28555092)
chr6 (195-239)||(30397718-30397762)
chr6 (196-227)||(31536305-31536336)
chr6 (17-55)||(23906919-23906957)
chr6 (197-227)||(30397839-30397869)
chr6 (197-246)||(18097055-18097104)
chr6 (197-246)||(28554942-28554991)
chr6 (197-246)||(30422427-30422476)
chr6 (197-246)||(31398322-31398371)
chr6 (193-246)||(34379831-34379884)
chr6 (196-244)||(2988897-2988944)
[»] chr1 (62 HSPs)
chr1 (195-246)||(28725562-28725613)
chr1 (196-246)||(36040140-36040190)
chr1 (196-246)||(36040242-36040292)
chr1 (197-246)||(6283530-6283579)
chr1 (197-246)||(6283631-6283680)
chr1 (197-246)||(28725461-28725510)
chr1 (192-246)||(23575307-23575362)
chr1 (196-242)||(24115745-24115791)
chr1 (196-246)||(52183836-52183886)
chr1 (197-246)||(33939292-33939341)
chr1 (197-246)||(37539586-37539635)
chr1 (196-244)||(23915786-23915834)
chr1 (197-246)||(31130909-31130959)
chr1 (196-246)||(41161561-41161611)
chr1 (196-246)||(45115266-45115316)
chr1 (197-246)||(23575414-23575463)
chr1 (197-242)||(45154137-45154182)
chr1 (197-242)||(47023185-47023230)
chr1 (196-239)||(31008253-31008296)
chr1 (192-227)||(37734888-37734923)
chr1 (131-194)||(43742680-43742743)
chr1 (200-246)||(52183574-52183621)
chr1 (197-239)||(4060274-4060316)
chr1 (200-246)||(8338673-8338719)
chr1 (196-246)||(14214625-14214675)
chr1 (197-246)||(31130790-31130840)
chr1 (201-246)||(10832090-10832135)
chr1 (196-237)||(31130693-31130734)
chr1 (197-242)||(45115165-45115210)
chr1 (197-246)||(52923419-52923468)
chr1 (196-239)||(6065455-6065498)
chr1 (196-227)||(6065576-6065607)
chr1 (195-246)||(8338771-8338822)
chr1 (195-246)||(14214543-14214594)
chr1 (196-227)||(23944031-23944062)
chr1 (196-227)||(27206874-27206905)
chr1 (196-227)||(29302058-29302089)
chr1 (196-227)||(29302180-29302211)
chr1 (196-227)||(33604106-33604137)
chr1 (196-227)||(40262581-40262612)
chr1 (196-246)||(45154031-45154081)
chr1 (196-239)||(46829975-46830018)
chr1 (196-227)||(48022589-48022620)
chr1 (196-227)||(48022710-48022741)
chr1 (195-246)||(49586185-49586236)
chr1 (197-227)||(639794-639824)
chr1 (197-227)||(639914-639944)
chr1 (197-227)||(1036002-1036032)
chr1 (197-227)||(8258058-8258088)
chr1 (196-246)||(19175684-19175734)
chr1 (197-239)||(27206754-27206796)
chr1 (196-246)||(33939393-33939443)
chr1 (193-226)||(47677-47710)
chr1 (197-246)||(2122565-2122614)
chr1 (190-227)||(3384211-3384248)
chr1 (197-246)||(6508493-6508542)
chr1 (197-246)||(23398414-23398463)
chr1 (197-246)||(29374025-29374074)
chr1 (202-246)||(15057657-15057701)
chr1 (195-227)||(17490481-17490513)
chr1 (202-246)||(24981937-24981981)
chr1 (201-245)||(38758397-38758441)
[»] chr7 (45 HSPs)
chr7 (196-246)||(10414933-10414983)
chr7 (195-246)||(24935885-24935936)
chr7 (195-246)||(34275184-34275235)
chr7 (196-246)||(4406073-4406123)
chr7 (197-246)||(8447712-8447761)
chr7 (197-246)||(28949371-28949420)
chr7 (194-246)||(6455645-6455697)
chr7 (196-246)||(41803818-41803868)
chr7 (196-246)||(34275287-34275338)
chr7 (197-246)||(10415035-10415084)
chr7 (197-246)||(36547582-36547631)
chr7 (196-239)||(38238887-38238930)
chr7 (196-246)||(25245239-25245289)
chr7 (204-246)||(41872147-41872189)
chr7 (201-246)||(3967704-3967749)
chr7 (205-246)||(3967801-3967842)
chr7 (197-246)||(4406175-4406224)
chr7 (197-246)||(8447813-8447862)
chr7 (194-226)||(16777884-16777916)
chr7 (196-227)||(2297325-2297356)
chr7 (196-227)||(2360443-2360474)
chr7 (196-227)||(8595262-8595293)
chr7 (196-227)||(10422923-10422954)
chr7 (196-227)||(34703558-34703589)
chr7 (196-227)||(38238777-38238808)
chr7 (203-246)||(47534971-47535014)
chr7 (196-246)||(2456330-2456380)
chr7 (196-246)||(6455543-6455593)
chr7 (204-246)||(7701190-7701232)
chr7 (197-227)||(8571497-8571527)
chr7 (192-246)||(12274799-12274853)
chr7 (208-246)||(19688105-19688143)
chr7 (197-239)||(25079202-25079244)
chr7 (193-227)||(26824897-26824931)
chr7 (196-226)||(46648743-46648773)
chr7 (197-246)||(2943207-2943256)
chr7 (197-246)||(5689372-5689421)
chr7 (197-246)||(5950290-5950339)
chr7 (197-226)||(8571377-8571406)
chr7 (197-246)||(10095714-10095763)
chr7 (194-227)||(15051198-15051231)
chr7 (197-246)||(18113331-18113380)
chr7 (194-239)||(25079310-25079355)
chr7 (195-244)||(34750321-34750370)
chr7 (195-227)||(43103065-43103097)
[»] chr3 (44 HSPs)
chr3 (197-246)||(25881131-25881180)
chr3 (197-246)||(25881232-25881281)
chr3 (197-246)||(8439253-8439302)
chr3 (196-246)||(38677661-38677711)
chr3 (197-246)||(8439354-8439403)
chr3 (195-246)||(8504946-8504997)
chr3 (196-246)||(9170106-9170156)
chr3 (192-246)||(12708776-12708830)
chr3 (197-246)||(8504845-8504894)
chr3 (17-55)||(9720146-9720184)
chr3 (196-246)||(12047239-12047289)
chr3 (194-228)||(50261048-50261082)
chr3 (194-227)||(17552469-17552502)
chr3 (197-246)||(19857536-19857585)
chr3 (201-246)||(26104773-26104818)
chr3 (206-246)||(3074782-3074822)
chr3 (202-246)||(21217166-21217210)
chr3 (202-246)||(24075447-24075491)
chr3 (196-232)||(51239237-51239273)
chr3 (194-226)||(51617447-51617479)
chr3 (131-198)||(9720228-9720295)
chr3 (195-246)||(12744894-12744945)
chr3 (196-227)||(51239358-51239389)
chr3 (197-244)||(52215978-52216025)
chr3 (196-246)||(331894-331944)
chr3 (196-246)||(10872768-10872818)
chr3 (197-227)||(21404009-21404039)
chr3 (196-246)||(24075541-24075591)
chr3 (197-227)||(29565104-29565134)
chr3 (197-227)||(36362599-36362629)
chr3 (197-227)||(41349655-41349685)
chr3 (197-227)||(41349776-41349806)
chr3 (196-246)||(46015669-46015719)
chr3 (197-227)||(52168278-52168308)
chr3 (197-246)||(54690925-54690975)
chr3 (195-228)||(5919425-5919458)
chr3 (197-246)||(7882276-7882325)
chr3 (197-246)||(30519694-30519743)
chr3 (197-246)||(38677560-38677609)
chr3 (201-246)||(39964294-39964339)
chr3 (197-226)||(40470534-40470563)
chr3 (193-246)||(54595781-54595834)
chr3 (195-227)||(51617324-51617356)
chr3 (197-245)||(52215875-52215923)
[»] chr2 (42 HSPs)
chr2 (195-246)||(24457093-24457144)
chr2 (196-246)||(24457196-24457246)
chr2 (197-246)||(19950112-19950161)
chr2 (193-246)||(26234015-26234068)
chr2 (196-246)||(2060198-2060249)
chr2 (197-246)||(9431192-9431241)
chr2 (197-246)||(29819765-29819814)
chr2 (196-246)||(19612935-19612985)
chr2 (197-246)||(19950213-19950262)
chr2 (196-232)||(2060612-2060648)
chr2 (196-239)||(5574213-5574256)
chr2 (195-238)||(38181864-38181907)
chr2 (197-239)||(15119880-15119922)
chr2 (192-246)||(26003425-26003479)
chr2 (197-246)||(8266408-8266457)
chr2 (197-246)||(21488123-21488172)
chr2 (202-246)||(3098222-3098266)
chr2 (202-246)||(25270952-25270996)
chr2 (196-244)||(32316515-32316563)
chr2 (195-239)||(38465782-38465826)
chr2 (196-232)||(38594338-38594374)
chr2 (196-232)||(38597934-38597970)
chr2 (195-227)||(38598055-38598087)
chr2 (200-239)||(3121525-3121564)
chr2 (203-246)||(8383281-8383324)
chr2 (195-246)||(26234120-26234171)
chr2 (196-227)||(38594459-38594490)
chr2 (196-226)||(1980979-1981009)
chr2 (197-227)||(3887948-3887978)
chr2 (196-246)||(8740513-8740563)
chr2 (196-246)||(9431293-9431343)
chr2 (204-246)||(13333543-13333585)
chr2 (196-246)||(26229440-26229490)
chr2 (196-246)||(27331855-27331905)
chr2 (196-226)||(37195046-37195076)
chr2 (193-246)||(31024162-31024215)
chr2 (197-246)||(38465885-38465934)
chr2 (209-246)||(40363226-40363263)
chr2 (205-246)||(41056984-41057025)
chr2 (194-246)||(10602390-10602442)
chr2 (194-226)||(41805266-41805298)
chr2 (194-246)||(44587635-44587687)
[»] chr4 (35 HSPs)
chr4 (197-246)||(56328546-56328595)
chr4 (196-246)||(21884012-21884063)
chr4 (196-246)||(56328443-56328494)
chr4 (196-246)||(49481976-49482026)
chr4 (197-246)||(16468199-16468248)
chr4 (197-246)||(21884115-21884164)
chr4 (197-246)||(51232266-51232315)
chr4 (202-246)||(4044394-4044438)
chr4 (196-246)||(24851506-24851556)
chr4 (196-246)||(14450951-14451001)
chr4 (200-246)||(20294527-20294573)
chr4 (196-246)||(54713092-54713142)
chr4 (197-246)||(2440905-2440954)
chr4 (197-246)||(14451053-14451102)
chr4 (197-246)||(23071502-23071551)
chr4 (194-246)||(54164909-54164961)
chr4 (195-234)||(6126760-6126799)
chr4 (199-246)||(20215564-20215611)
chr4 (196-246)||(21224781-21224832)
chr4 (195-226)||(28702177-28702208)
chr4 (196-246)||(54713194-54713245)
chr4 (196-246)||(4044292-4044342)
chr4 (189-239)||(4406228-4406278)
chr4 (200-246)||(19878145-19878191)
chr4 (196-246)||(22235356-22235406)
chr4 (196-226)||(28702055-28702085)
chr4 (196-246)||(51232367-51232417)
chr4 (197-227)||(52817682-52817712)
chr4 (197-227)||(55087826-55087856)
chr4 (197-246)||(2441006-2441054)
chr4 (194-227)||(5281250-5281283)
chr4 (202-246)||(38381976-38382020)
chr4 (202-246)||(39160910-39160954)
chr4 (202-238)||(47181559-47181595)
chr4 (202-246)||(56364422-56364466)
[»] scaffold0059 (1 HSPs)
scaffold0059 (197-246)||(4369-4418)
[»] scaffold0050 (2 HSPs)
scaffold0050 (194-246)||(6205-6257)
scaffold0050 (196-246)||(6309-6359)
[»] scaffold0047 (2 HSPs)
scaffold0047 (194-227)||(61155-61188)
scaffold0047 (197-239)||(61265-61307)
[»] scaffold0020 (1 HSPs)
scaffold0020 (197-246)||(139392-139441)
[»] scaffold0039 (1 HSPs)
scaffold0039 (196-239)||(54382-54425)
[»] scaffold0024 (2 HSPs)
scaffold0024 (195-226)||(120138-120169)
scaffold0024 (196-227)||(120260-120291)
[»] scaffold0536 (1 HSPs)
scaffold0536 (197-227)||(3945-3975)
[»] scaffold0027 (1 HSPs)
scaffold0027 (196-226)||(17161-17191)


Alignment Details
Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 1063367 - 1063301
Alignment:
Q  131 tcttatacataaaacaaactagtggcaaaccttaaacataatcgacttaaaatctcaaatcttaaat 197  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1063367 tcttaaacataaaacaaactagtggcaaagcttaaacataatcgacttaaaatctcaaatcttaaat 1063301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 41180359 - 41180309
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41180359 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 41180309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 5259379 - 5259429
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5259379 atacaccctccggtcactaatataagcaaaaaactatattttaggttcatt 5259429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 5259530 - 5259481
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5259530 tacaccctccggtcactaatataagcaaaaaactacattttagattcatt 5259481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 41180208 - 41180257
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41180208 tacaccctccggtcattaatataagcaaaaaactacattttaggttcatt 41180257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 7738407 - 7738455
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcat 245  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7738407 tacaccctccagtcactaatataagcaaaaaactacattttaggttcat 7738455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 1063488 - 1063434
Alignment:
Q  11 tcgaagaatattaaatatatactgtaaagtgcataaacaacttaagactttctct 65  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  1063488 tcgaataatattaaatatataccgtaaagtgcataaacaacttaagagtttctct 1063434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 18033350 - 18033399
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  18033350 tacaccctccggtcactgatataagcaaaaaactatattttaggttcatt 18033399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 14772542 - 14772592
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||||||    
T  14772542 atacaccctccggtcactattataagcaaaaatcaacattttaggttcatt 14772592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 26141900 - 26141851
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||||| ||| ||| ||||||    
T  26141900 tacaccctccggtcactaatataagcaaaaaactatattctagattcatt 26141851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 11795728 - 11795780
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||| ||||||    
T  11795728 aaatataccctccggtcactaatataagcaaaaatcaacattttagattcatt 11795780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 10437783 - 10437733
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||| |||||||||||| | ||||||||| ||||||    
T  10437783 atacaccctccggtcactattataagcaaaaatcaacattttagattcatt 10437733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 71254 - 71303
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||| |||||||||||| ||| ||||||| ||||||    
T  71254 tacaccctccggtcactattataagcaaaaatctatattttagattcatt 71303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 18033502 - 18033458
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacattttag 239  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||    
T  18033502 aatacatcctccggtcactattataagcaaaaatctacattttag 18033458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 3851509 - 3851478
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  3851509 atacaccctccggtcactaatataagcaaaaa 3851478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 6763843 - 6763812
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  6763843 atacaccctccggtcactaatataagcaaaaa 6763812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 20518166 - 20518208
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttag 239  Q
    |||||||||||||||| ||||||||| |||||||||||||||||    
T  20518166 atacaccctccggtcattaatataag-aaaaaactacattttag 20518208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Original strand, 23914835 - 23914866
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  23914835 atacaccctccggtcactaatataagcaaaaa 23914866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 23914987 - 23914956
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  23914987 atacaccctccggtcactaatataagcaaaaa 23914956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 25772144 - 25772179
Alignment:
Q  192 ttaaatacaccctccggtcactaatataagcaaaaa 227  Q
    |||| |||||||||||||||||||||||||||||||    
T  25772144 ttaactacaccctccggtcactaatataagcaaaaa 25772179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Original strand, 26300105 - 26300136
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  26300105 atacaccctccggtcactaatataagcaaaaa 26300136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Original strand, 1996842 - 1996872
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  1996842 tacaccctccggtcactaatataagcaaaaa 1996872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 1996993 - 1996963
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  1996993 tacaccctccggtcactaatataagcaaaaa 1996963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 13356283 - 13356233
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||| || |||||||||||| |||| ||||| |||||||    
T  13356283 atacaccctccggtcattattataagcaaaaatctactttttaagttcatt 13356233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 15549471 - 15549421
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||| ||||| |||||| | ||||||||| ||||||    
T  15549471 atacaccctccggtcactattataaacaaaaatcaacattttagattcatt 15549421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 226
Target Start/End: Complemental strand, 20019894 - 20019864
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaa 226  Q
    |||||||||||||||||||||||||||||||    
T  20019894 atacaccctccggtcactaatataagcaaaa 20019864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 226
Target Start/End: Complemental strand, 25772301 - 25772271
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaa 226  Q
    |||||||||||||||||||||||||||||||    
T  25772301 atacaccctccggtcactaatataagcaaaa 25772271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Original strand, 27314470 - 27314500
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  27314470 tacaccctccggtcactaatataagcaaaaa 27314500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 234
Target Start/End: Complemental strand, 7306581 - 7306544
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacat 234  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  7306581 tacaccctccggtcactattataagcaaaaaaatacat 7306544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 9707184 - 9707135
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||| ||||||||| |||||||||||| ||||  ||||||||||||    
T  9707184 tacacccttcggtcactattataagcaaaaatctactatttaggttcatt 9707135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 226
Target Start/End: Original strand, 13311170 - 13311199
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaa 226  Q
    ||||||||||||||||||||||||||||||    
T  13311170 tacaccctccggtcactaatataagcaaaa 13311199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 16441608 - 16441645
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacat 234  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  16441608 tacaccctccggtcactattataagcaaaaaaatacat 16441645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 25408535 - 25408568
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||| ||||||||||||||    
T  25408535 aaatacaccctccggtcacaaatataagcaaaaa 25408568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 25792987 - 25792942
Alignment:
Q  201 ccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||| ||||||||||||  ||| |||||||||||||    
T  25792987 ccctccggtcactattataagcaaaaatttactttttaggttcatt 25792942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 26141750 - 26141799
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||| |||||||||||   |||||||||| ||||||    
T  26141750 tacaccctccggtcactattataagcaaaagtttacattttagattcatt 26141799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 43446847 - 43446884
Alignment:
Q  190 tcttaaatacaccctccggtcactaatataagcaaaaa 227  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  43446847 tcttatatacaccctccggttactaatataagcaaaaa 43446884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 43447520 - 43447483
Alignment:
Q  190 tcttaaatacaccctccggtcactaatataagcaaaaa 227  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  43447520 tcttacatataccctccggtcactaatataagcaaaaa 43447483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 19531294 - 19531326
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||| ||||||||||||||    
T  19531294 aatacaccctccggtcacaaatataagcaaaaa 19531326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 38835676 - 38835640
Alignment:
Q  192 ttaaatacaccctccggtcactaatataagcaaaaaa 228  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  38835676 ttaagtacaccctctggtcactaatataagcaaaaaa 38835640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 31505029 - 31505082
Alignment:
Q  193 taaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31505029 taaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 31505082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 31505184 - 31505134
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31505184 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 31505134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 31810481 - 31810430
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31810481 aatacaccctccggtcactaatataagcaaaaaactacattttagattcatt 31810430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 13496428 - 13496479
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  13496428 aatacaccatccggtcactaatataagcaaaaaactacattctaggttcatt 13496479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 24053592 - 24053641
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||    
T  24053592 tacaccctccggtcactaatataagcaaaaaattatattttaggttcatt 24053641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 1744227 - 1744276
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||| ||| |||||| |||||||    
T  1744227 tacaccctccggtcactaatataagcaaaaatctatattttatgttcatt 1744276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 40098753 - 40098797
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacattttag 239  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||    
T  40098753 aatacaccctccggtcactaatataagcaaaaatctactttttag 40098797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 31810328 - 31810378
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||| |||||||||||  ||||||||||| ||||||    
T  31810328 atacaccctccggtcactattataagcaaaatgctacattttagattcatt 31810378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 10934598 - 10934639
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacatttta 238  Q
    |||||||||||||||||| |||||||||||||||| ||||||    
T  10934598 tacaccctccggtcactattataagcaaaaaactatatttta 10934639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 10934748 - 10934699
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||| |||||||||||| | ||||||||| ||||||    
T  10934748 tacaccctccggtcactattataagcaaaaatcaacattttagattcatt 10934699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 27518460 - 27518411
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||| ||||| |||||| ||||||||||| ||||||    
T  27518460 tacaccctccggtcactattataaacaaaaatctacattttagattcatt 27518411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 41387907 - 41387858
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||| ||||||||||| |||||||||||||||| ||||||| ||||||    
T  41387907 tacaccatccggtcactattataagcaaaaaactatattttagattcatt 41387858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 246
Target Start/End: Original strand, 13290032 - 13290079
Alignment:
Q  199 caccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||| ||||||||||||| |||||||| | ||||||    
T  13290032 caccctccggtcactattataagcaaaaaattacattttggattcatt 13290079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 15037739 - 15037794
Alignment:
Q  191 cttaaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||| |||||||||| || ||||| |||||| |||| |||||||||||||    
T  15037739 cttaaatacatcctccggtcagtattataaacaaaaatctactttttaggttcatt 15037794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 40098906 - 40098875
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  40098906 atacaccctccggtcactaatataagcaaaaa 40098875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 1739710 - 1739680
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  1739710 tacaccctccggtcactaatataagcaaaaa 1739680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 2116100 - 2116150
Alignment:
Q  197 tacaccctccggtcactaatataag-caaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||||||  ||||||||| ||||||| ||||||    
T  2116100 tacaccctccggtcactaatataagtaaaaaaactatattttagattcatt 2116150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 9056166 - 9056136
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  9056166 tacaccctccggtcactaatataagcaaaaa 9056136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 12736357 - 12736399
Alignment:
Q  204 tccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||| |||| ||||||||||||||||| |||||||||||||    
T  12736357 tccggttactattataagcaaaaaactactttttaggttcatt 12736399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 13496581 - 13496539
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacatttta 238  Q
    ||||||||||||||||||| ||||||||||||  |||||||||    
T  13496581 atacaccctccggtcactattataagcaaaaatttacatttta 13496539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Original strand, 14381233 - 14381263
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  14381233 tacaccctccggtcactaatataagcaaaaa 14381263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 7484766 - 7484713
Alignment:
Q  193 taaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||| |||||| || |||||||||||| | ||||||||| ||||||    
T  7484766 taaatacaccctacggtcattattataagcaaaaatcaacattttagattcatt 7484713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 10117115 - 10117066
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||| ||||||||||| ||||||||||||  |||||||||| ||||||    
T  10117115 tacaccatccggtcactattataagcaaaaatttacattttagattcatt 10117066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 17087347 - 17087379
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaa 226  Q
    ||||||| |||||||||||||||||||||||||    
T  17087347 aaatacatcctccggtcactaatataagcaaaa 17087379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 29451725 - 29451761
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactac 232  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  29451725 atacaccctccggtcactaatataagaaaaaatctac 29451761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 33574930 - 33574890
Alignment:
Q  199 caccctccggtcactaatataagcaaaaaactacattttag 239  Q
    |||||||||||||||||||||| |||||| | |||||||||    
T  33574930 caccctccggtcactaatataaacaaaaatccacattttag 33574890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 42749047 - 42749079
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaa 226  Q
    ||||||| |||||||||||||||||||||||||    
T  42749047 aaatacatcctccggtcactaatataagcaaaa 42749079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 6560648 - 6560701
Alignment:
Q  193 taaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6560648 taaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 6560701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 31398221 - 31398270
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31398221 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 31398270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 18097208 - 18097156
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  18097208 aaatacaccctccggtcactaatataaacaaaaaactacattctaggttcatt 18097156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 8145943 - 8145993
Alignment:
Q  197 tacaccctccggtcactaatataagc-aaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8145943 tacaccctccggtcactaatataagcaaaaaaactacattttaggttcatt 8145993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 8146095 - 8146045
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  8146095 atacaccctccggtcactaatataagcaaaaaattacattttagattcatt 8146045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 2988794 - 2988843
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  2988794 tacaccctccggtcattaatataagcaaaaaattacattttaggttcatt 2988843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 6560802 - 6560753
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  6560802 tacaccctccggtcactaatataagcaaaaaattacattttagattcatt 6560753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 17773648 - 17773604
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacattttag 239  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||    
T  17773648 aatacaccctccggtcactaatataagcaaaaatctactttttag 17773604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 31996647 - 31996595
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||| |||||||||||| |||||||||||| | ||||||||||||||||    
T  31996647 aaatacactctccggtcactattataagcaaaaatcaacattttaggttcatt 31996595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 21506453 - 21506488
Alignment:
Q  192 ttaaatacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||||||    
T  21506453 ttaaatacaccctccggtcactaatataagcaaaaa 21506488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 16199122 - 16199164
Alignment:
Q  204 tccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||| |||||||||||| ||||||||||||||||||    
T  16199122 tccggtcactattataagcaaaaatctacattttaggttcatt 16199164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 14310516 - 14310565
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||| ||||||||| ||||| |||||||||| |||||||    
T  14310516 tacaccctccggtcattaatataagtaaaaatctacattttatgttcatt 14310565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 14310666 - 14310617
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||| ||  ||||||| ||||||    
T  14310666 tacaccctccggtcactaatataagcaaaaatctgtattttagattcatt 14310617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 28555092 - 28555043
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||| |||||||| |||||||||||| ||||||||||| ||||||    
T  28555092 tacaccctctggtcactattataagcaaaaatctacattttagattcatt 28555043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 30397718 - 30397762
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacattttag 239  Q
    |||||||||||||||||||||||||| |||||| | |||||||||    
T  30397718 aatacaccctccggtcactaatataaacaaaaatccacattttag 30397762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Original strand, 31536305 - 31536336
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  31536305 atacaccctccggtcactaatataagcaaaaa 31536336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 23906919 - 23906957
Alignment:
Q  17 aatattaaatatatactgtaaagtgcataaacaacttaa 55  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  23906919 aatattaaatatatactataaagtgcataaactacttaa 23906957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 30397869 - 30397839
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  30397869 tacaccctccggtcactaatataagcaaaaa 30397839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 18097055 - 18097104
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||| |||||||||||   |||||||||| ||||||    
T  18097055 tacaccctccggtcactattataagcaaaagtttacattttagattcatt 18097104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 28554942 - 28554991
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||| ||||| |||||||||||||| |||||  |||||||||||||||||    
T  28554942 tacatcctccagtcactaatataagtaaaaatttacattttaggttcatt 28554991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 30422476 - 30422427
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||| ||||||| |||||| ||||||| | ||||||||||||||    
T  30422476 tacaccctcctgtcactattataagtaaaaaaccatattttaggttcatt 30422427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 31398371 - 31398322
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||| |||||||||||   |||||||||| ||||||    
T  31398371 tacaccctccggtcactattataagcaaaagtttacattttagattcatt 31398322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 34379884 - 34379831
Alignment:
Q  193 taaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||| | ||||||||| |||||||||||| | ||||||||| ||||||    
T  34379884 taaatacaccatacggtcactattataagcaaaaatcaacattttagattcatt 34379831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 2988944 - 2988897
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttca 244  Q
    |||||||||||| ||||||||| ||||||||||||| |||||| |||||    
T  2988944 atacaccctccg-tcactaataaaagcaaaaaactatattttaagttca 2988897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 28725613 - 28725562
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28725613 aatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 28725562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 36040140 - 36040190
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36040140 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 36040190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 36040292 - 36040242
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36040292 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 36040242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 6283530 - 6283579
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6283530 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 6283579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 6283680 - 6283631
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6283680 tacaccatccggtcactaatataagcaaaaaactacattttaggttcatt 6283631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 28725461 - 28725510
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28725461 tacaccctccggtcactaatataagcaaaaaactatattttaggttcatt 28725510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 23575307 - 23575362
Alignment:
Q  192 ttaaatacaccctccggtcactaatataagc-aaaaaactacattttaggttcatt 246  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23575307 ttaagtacaccctccggtcactaatataagcaaaaaaactacattttaggttcatt 23575362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 24115745 - 24115791
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggtt 242  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  24115745 atacaccctctggtcactaatataagcaaaaaactacattttaggtt 24115791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 52183886 - 52183836
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  52183886 atacaccctctggtcactaatataagcaaaaaactatattttaggttcatt 52183836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 33939292 - 33939341
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  33939292 tacaccctccggtcactaatataagcaaaaaactatattctaggttcatt 33939341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 37539586 - 37539635
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  37539586 tacaccctccggtcactaatataagtaaaaaactatattttaggttcatt 37539635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 23915786 - 23915834
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttca 244  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  23915786 atacatcctccggtcactaatacaagcaaaaaactacattttaggttca 23915834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 31130959 - 31130909
Alignment:
Q  197 tacaccctccggtcactaatataagcaa-aaaactacattttaggttcatt 246  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  31130959 tacaccctccgatcactaatataagcaaaaaaactacattttaggttcatt 31130909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 41161611 - 41161561
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||||||||||||||  |||||||| |||||||    
T  41161611 atacaccctccggtcactaatataagcaaaaaataacattttaagttcatt 41161561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 45115316 - 45115266
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||| |||||||||||| ||||||||||| ||||||    
T  45115316 atacaccctccggtcactattataagcaaaaatctacattttagattcatt 45115266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 23575463 - 23575414
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||||    
T  23575463 tacatcctccggtcactaatataagtaaaaaattacattttaggttcatt 23575414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 45154182 - 45154137
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggtt 242  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  45154182 tacaccctccggtcactgatataagcaaaaaactatattttaggtt 45154137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 47023185 - 47023230
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggtt 242  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  47023185 tacaccctccgatcactaatataagtaaaaaactacattttaggtt 47023230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 31008253 - 31008296
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttag 239  Q
    |||||||||||||||||||||||||||||||| |||| ||||||    
T  31008253 atacaccctccggtcactaatataagcaaaaatctactttttag 31008296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 37734923 - 37734888
Alignment:
Q  192 ttaaatacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||||||    
T  37734923 ttaaatacaccctccggtcactaatataagcaaaaa 37734888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 43742680 - 43742743
Alignment:
Q  131 tcttatacataaaacaaactagtggcaaaccttaaacataatcgacttaaaatctcaaatctta 194  Q
    ||||| || ||| ||||||||||| |||| ||||||||||||||||| ||| ||||||||||||    
T  43742680 tcttaaacttaatacaaactagtgacaaaacttaaacataatcgactgaaagtctcaaatctta 43742743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 52183574 - 52183621
Alignment:
Q  200 accctccggtcactaatataagc-aaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||    
T  52183574 accctccggtcactaatataagcaaaaaaattacattttaggttcatt 52183621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 4060316 - 4060274
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttag 239  Q
    ||||||||||||||||||||||||||||||| |||| ||||||    
T  4060316 tacaccctccggtcactaatataagcaaaaatctactttttag 4060274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 8338673 - 8338719
Alignment:
Q  200 accctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||| |||||||||||| ||||||||||| ||||||    
T  8338673 accctccggtcactattataagcaaaaatctacattttagattcatt 8338719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 14214675 - 14214625
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||| ||||||||||||  ||| |||||||||||||    
T  14214675 atacaccctccggtcactattataagcaaaaacttactttttaggttcatt 14214625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 31130840 - 31130790
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaa-ctacattttaggttcatt 246  Q
    ||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  31130840 tacaccctccgattactaatataagcaaaaaaactacattttaggttcatt 31130790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 10832135 - 10832090
Alignment:
Q  201 ccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||| ||||| |||||| ||||||||||||||||||    
T  10832135 ccctccggtcactattataaacaaaaatctacattttaggttcatt 10832090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 31130693 - 31130734
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacatttt 237  Q
    |||||||||||| |||||||||||||||||||| ||||||||    
T  31130693 atacaccctccgctcactaatataagcaaaaaattacatttt 31130734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 45115165 - 45115210
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggtt 242  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||||||    
T  45115165 tacaccctccgatcactaatataagcaaaaatctatattttaggtt 45115210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 52923468 - 52923419
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||| |||||||| |||||||||||| |||| |||||||||||||    
T  52923468 tacaccctcaggtcactattataagcaaaaatctactttttaggttcatt 52923419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 6065455 - 6065498
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttag 239  Q
    |||||||||||||||||||||||||||||||  |||| ||||||    
T  6065455 atacaccctccggtcactaatataagcaaaattctactttttag 6065498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 6065607 - 6065576
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  6065607 atacaccctccggtcactaatataagcaaaaa 6065576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 8338822 - 8338771
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||| ||| ||||||||| |||| | |||||||||||||||||    
T  8338822 aatacaccctccgatcattaatataagtaaaagattacattttaggttcatt 8338771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 14214543 - 14214594
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||| ||||||||||||   || |||||||||||||    
T  14214543 aatacaccctccggtcactattataagcaaaaattcactttttaggttcatt 14214594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Original strand, 23944031 - 23944062
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  23944031 atacaccctccggtcactaatataagcaaaaa 23944062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 27206905 - 27206874
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  27206905 atacaccctccggtcactaatataagcaaaaa 27206874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Original strand, 29302058 - 29302089
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  29302058 atacaccctccggtcactaatataagcaaaaa 29302089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 29302211 - 29302180
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  29302211 atacaccctccggtcactaatataagcaaaaa 29302180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 33604137 - 33604106
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  33604137 atacaccctccggtcactaatataagcaaaaa 33604106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 40262612 - 40262581
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  40262612 atacaccctccggtcactaatataagcaaaaa 40262581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 45154031 - 45154081
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaa-aactacattttaggttcatt 246  Q
    ||||||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  45154031 atacaccctccgg-cactaatataagtaaaaaaactacattttaggttcatt 45154081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 46830018 - 46829975
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttag 239  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  46830018 atacaccatccggtcactattattagcaaaaaactacattttag 46829975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Original strand, 48022589 - 48022620
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  48022589 atacaccctccggtcactaatataagcaaaaa 48022620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 48022741 - 48022710
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  48022741 atacaccctccggtcactaatataagcaaaaa 48022710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 49586236 - 49586185
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||| || | |||| ||||||||||||||||||||||| ||||||||||    
T  49586236 aatacactcttcagtcattaatataagcaaaaaactacattctaggttcatt 49586185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Original strand, 639794 - 639824
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  639794 tacaccctccggtcactaatataagcaaaaa 639824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 639944 - 639914
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  639944 tacaccctccggtcactaatataagcaaaaa 639914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 1036032 - 1036002
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  1036032 tacaccctccggtcactaatataagcaaaaa 1036002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 8258088 - 8258058
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  8258088 tacaccctccggtcactaatataagcaaaaa 8258058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 19175734 - 19175684
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||| ||||||| |||||||||||| |||| |||||| ||||||    
T  19175734 atacaccctccagtcactattataagcaaaaatctactttttagattcatt 19175684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 27206754 - 27206796
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttag 239  Q
    |||||||||||| |||||||||||||||||||| || ||||||    
T  27206754 tacaccctccggccactaatataagcaaaaaaccactttttag 27206796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 33939443 - 33939393
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||| |||||||||||   |||||||||| ||||||    
T  33939443 atacaccctccggtcactattataagcaaaagtttacattttagattcatt 33939393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 47677 - 47710
Alignment:
Q  193 taaatacaccctccggtcactaatataagcaaaa 226  Q
    ||||||||||||||||||||||||||||| ||||    
T  47677 taaatacaccctccggtcactaatataagtaaaa 47710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 2122565 - 2122614
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||| ||||||||||||| |||||||||||||| | ||||||| ||||||    
T  2122565 tacatcctccggtcactattataagcaaaaaaccatattttagtttcatt 2122614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 3384211 - 3384248
Alignment:
Q  190 tcttaaatacaccctccggtcactaatataagcaaaaa 227  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  3384211 tcttaagtacaccctccggtcattaatataagcaaaaa 3384248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 6508542 - 6508493
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||| |||||||| |||||||||||||||||  || ||||||||||||||    
T  6508542 tacatcctccggttactaatataagcaaaaatttatattttaggttcatt 6508493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 23398414 - 23398463
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||| ||||||||||||   ||||||||| ||||||    
T  23398414 tacaccctccggtcactattataagcaaaaactaacattttagattcatt 23398463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 29374025 - 29374074
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||| ||||||||||||| |||||||||||||  | ||||||||||||||    
T  29374025 tacatcctccggtcactattataagcaaaaaatcatattttaggttcatt 29374074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 246
Target Start/End: Original strand, 15057657 - 15057701
Alignment:
Q  202 cctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||| |||||| ||||||||||||||||| |||||| ||||||    
T  15057657 cctccgatcactattataagcaaaaaactactttttagattcatt 15057701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 17490481 - 17490513
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaa 227  Q
    |||| ||||||||||||||||||||||||||||    
T  17490481 aatagaccctccggtcactaatataagcaaaaa 17490513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 24981981 - 24981937
Alignment:
Q  202 cctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||| |||||||||||| | ||||||||| ||||||    
T  24981981 cctccggtcactattataagcaaaaatcaacattttagattcatt 24981937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 245
Target Start/End: Complemental strand, 38758441 - 38758397
Alignment:
Q  201 ccctccggtcactaatataagcaaaaaactacattttaggttcat 245  Q
    |||||||||||||| |||||||||||||  || ||||||||||||    
T  38758441 ccctccggtcactattataagcaaaaaaacactttttaggttcat 38758397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 10414933 - 10414983
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10414933 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 10414983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 24935885 - 24935936
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24935885 aatacaccctccggtcactaatataagcaaaaatctacattttaggttcatt 24935936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 34275184 - 34275235
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34275184 aatacatcctccggtcactaatataagcaaaaaactacattttaggttcatt 34275235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 4406073 - 4406123
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4406073 atacaccctccggtcactaatataagaaaaaaactacattttaggttcatt 4406123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 8447712 - 8447761
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8447712 tacaccctccggtcactaatataagcaaaaaactatattttaggttcatt 8447761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 28949420 - 28949371
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28949420 tacaccctccggtcactaatataagcaaaaaactacattctaggttcatt 28949371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 6455697 - 6455645
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  6455697 aaatacaccctccgatcactaatataagcaaaaatctacattttaggttcatt 6455645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 41803868 - 41803818
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  41803868 atacaccctccggtcgctaatataagcaaaaaactatattttaggttcatt 41803818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 34275338 - 34275287
Alignment:
Q  196 atacaccctccggtcactaatataagcaa-aaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  34275338 atacaccctccggtcactaatataagcaaaaaaactacattttagattcatt 34275287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 10415084 - 10415035
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||| ||||||||||||||||||||||| |||||| |||||||    
T  10415084 tacaccctccgatcactaatataagcaaaaaactatattttatgttcatt 10415035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 36547582 - 36547631
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  36547582 tacaccctccggtcactattataagcaaaaaaccatattttaggttcatt 36547631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 38238930 - 38238887
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttag 239  Q
    |||||||||||||||||||||||||||||||| |||| ||||||    
T  38238930 atacaccctccggtcactaatataagcaaaaatctactttttag 38238887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 25245289 - 25245239
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||| |||||||||||| | ||||||||| ||||||    
T  25245289 atacaccctccggtcactattataagcaaaaatcaacattttagattcatt 25245239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 41872189 - 41872147
Alignment:
Q  204 tccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  41872189 tccggtcactaatataagcaaaaatctacattttagattcatt 41872147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 3967704 - 3967749
Alignment:
Q  201 ccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||| |||||| ||||||||||||||||| |||||||||||||    
T  3967704 ccctccgatcactattataagcaaaaaactactttttaggttcatt 3967749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 3967842 - 3967801
Alignment:
Q  205 ccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||| ||||||||||||||||| |||||||||||||    
T  3967842 ccggtcactattataagcaaaaaactactttttaggttcatt 3967801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 4406224 - 4406175
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||| ||| ||||||||||||||||||| |||||| |||||||    
T  4406224 tacaccctccgatcattaatataagcaaaaaactatattttaagttcatt 4406175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 8447862 - 8447813
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||| ||||||||| |||||||||||| ||||||||||| ||||||    
T  8447862 tacacccttcggtcactattataagcaaaaatctacattttagattcatt 8447813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 16777884 - 16777916
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaa 226  Q
    |||||||||||||||||||||||||||||||||    
T  16777884 aaatacaccctccggtcactaatataagcaaaa 16777916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Original strand, 2297325 - 2297356
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  2297325 atacaccctccggtcactaatataagcaaaaa 2297356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Original strand, 2360443 - 2360474
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  2360443 atacaccctccggtcactaatataagcaaaaa 2360474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 8595293 - 8595262
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  8595293 atacaccctccggtcactaatataagcaaaaa 8595262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 10422954 - 10422923
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  10422954 atacaccctccggtcactaatataagcaaaaa 10422923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 34703589 - 34703558
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  34703589 atacaccctccggtcactaatataagcaaaaa 34703558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Original strand, 38238777 - 38238808
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  38238777 atacaccctccggtcactaatataagcaaaaa 38238808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 246
Target Start/End: Original strand, 47534971 - 47535014
Alignment:
Q  203 ctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||| ||||||||||||||||| ||||| |||||||    
T  47534971 ctccggtcactattataagcaaaaaactactttttaagttcatt 47535014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 2456330 - 2456380
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||| ||||||| |||||| |||||||||||| |||| |||||||||||||    
T  2456330 atactccctccgatcactattataagcaaaaatctactttttaggttcatt 2456380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 6455543 - 6455593
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||| |||||| ||||||||||||  |||||||||| ||||||    
T  6455543 atacaccctccgatcactattataagcaaaaatttacattttagattcatt 6455593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 7701190 - 7701232
Alignment:
Q  204 tccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||| |||||||||||| ||||||||||| ||||||    
T  7701190 tccggtcactattataagcaaaaatctacattttagattcatt 7701232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 8571527 - 8571497
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  8571527 tacaccctccggtcactaatataagcaaaaa 8571497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 12274799 - 12274853
Alignment:
Q  192 ttaaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||| ||||||||| |||||||| |||||||||||| | |||||||| |||||||    
T  12274799 ttaactacaccctctggtcactattataagcaaaaatccacattttatgttcatt 12274853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 19688105 - 19688143
Alignment:
Q  208 gtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  19688105 gtcactattataagcaaaaaaatacattttaggttcatt 19688143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 25079202 - 25079244
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttag 239  Q
    |||| |||||||||||||||||||||||||| |||| ||||||    
T  25079202 tacatcctccggtcactaatataagcaaaaatctactttttag 25079244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 26824897 - 26824931
Alignment:
Q  193 taaatacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||| ||||||||||||    
T  26824897 taaatacaccctccggtcactagtataagcaaaaa 26824931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 226
Target Start/End: Complemental strand, 46648773 - 46648743
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaa 226  Q
    |||||||||||||||||||||||||||||||    
T  46648773 atacaccctccggtcactaatataagcaaaa 46648743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 2943207 - 2943256
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||| ||||||||| |||||||||||| | ||||||||| ||||||    
T  2943207 tacacccttcggtcactattataagcaaaaatcaacattttagattcatt 2943256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 5689421 - 5689372
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||| || |||||||||||| ||||||| || ||||||||||||||    
T  5689421 tacacccttcgatcactaatataaacaaaaaattatattttaggttcatt 5689372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 5950339 - 5950290
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||| ||||||||||||   ||||||||| ||||||    
T  5950339 tacaccctccggtcactattataagcaaaaactaacattttagattcatt 5950290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 226
Target Start/End: Original strand, 8571377 - 8571406
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaa 226  Q
    ||||||||||||||||||||||||||||||    
T  8571377 tacaccctccggtcactaatataagcaaaa 8571406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 10095714 - 10095763
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||| ||||||||||||   ||||||||| ||||||    
T  10095714 tacaccctccggtcactattataagcaaaaattaacattttagattcatt 10095763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 15051231 - 15051198
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||| ||||||||||||||    
T  15051231 aaatacaccctccggtcacaaatataagcaaaaa 15051198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 18113380 - 18113331
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||  |||| |||||||||||||||| |||||||||| ||||||    
T  18113380 tacaccctctagtcaataatataagcaaaaaattacattttagattcatt 18113331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 25079355 - 25079310
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaaaactacattttag 239  Q
    ||||||| ||||||||||||||||||| |||||| |||| ||||||    
T  25079355 aaatacatcctccggtcactaatataaacaaaaatctactttttag 25079310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 34750321 - 34750370
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacattttaggttca 244  Q
    ||||| ||||||||| |||| |||||||||||| |||| |||||||||||    
T  34750321 aatactccctccggttactattataagcaaaaatctactttttaggttca 34750370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 43103065 - 43103097
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||| ||||||||||||    
T  43103065 aatacaccctccggtcactattataagcaaaaa 43103097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 25881131 - 25881180
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25881131 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 25881180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 25881281 - 25881232
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25881281 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 25881232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 8439253 - 8439302
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8439253 tacatcctccggtcactaatataagcaaaaaactacattttaggttcatt 8439302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 38677711 - 38677661
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  38677711 atacaccctccggtcactaatataagcaaaaaactatattctaggttcatt 38677661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 8439403 - 8439354
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||    
T  8439403 tacaccctccggtcactaatataagcaaaaaattatattttaggttcatt 8439354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 8504997 - 8504946
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||| |||||||| |||||||| |||||||||||||||||||||||||    
T  8504997 aatacaccatccggtcattaatataaacaaaaaactacattttaggttcatt 8504946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 9170106 - 9170156
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||| ||||||||||||| |||||||||| ||||||    
T  9170106 atacaccctccggtcactattataagcaaaaaattacattttagattcatt 9170156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 12708830 - 12708776
Alignment:
Q  192 ttaaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||| |||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  12708830 ttaagtacaccctccggtcactattataagcaaaaaaccatattttaggttcatt 12708776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 8504845 - 8504894
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||| |||||||||||| ||||||||||| ||||||    
T  8504845 tacaccctccggtcactattataagcaaaaatctacattttagattcatt 8504894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 9720146 - 9720184
Alignment:
Q  17 aatattaaatatatactgtaaagtgcataaacaacttaa 55  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  9720146 aatattaaatatatactataaagtgcataaacaacttaa 9720184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 12047239 - 12047289
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| |||||||    
T  12047239 atacaccctccgatcactaatataagtaaaaaattacattttaagttcatt 12047289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 228
Target Start/End: Complemental strand, 50261082 - 50261048
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaaaa 228  Q
    |||||||||||||||||||||||||||||||||||    
T  50261082 aaatacaccctccggtcactaatataagcaaaaaa 50261048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 17552469 - 17552502
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||||    
T  17552469 aaatacaccctccggtcactaatataagcaaaaa 17552502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 19857536 - 19857585
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||| ||||||||||||| |||||| ||||||||| |||||||    
T  19857536 tacaccctccgatcactaatataagtaaaaaattacattttaagttcatt 19857585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 26104773 - 26104818
Alignment:
Q  201 ccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||| |||||||||||||||||||||  |||||||||||||||||    
T  26104773 ccctctggtcactaatataagcaaaaatttacattttaggttcatt 26104818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 3074782 - 3074822
Alignment:
Q  206 cggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||| ||||||||||||||||||||||| ||||||||||    
T  3074782 cggtcattaatataagcaaaaaactacattctaggttcatt 3074822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 246
Target Start/End: Original strand, 21217166 - 21217210
Alignment:
Q  202 cctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||    
T  21217166 cctccggtcactattataagcaaaaatctacattttagattcatt 21217210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 246
Target Start/End: Original strand, 24075447 - 24075491
Alignment:
Q  202 cctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||||    
T  24075447 cctccggtcactattataagcaaaaaacaacattttagattcatt 24075491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 51239237 - 51239273
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactac 232  Q
    |||||||||||||||||||||||||||||||| ||||    
T  51239237 atacaccctccggtcactaatataagcaaaaatctac 51239273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 51617479 - 51617447
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaa 226  Q
    |||||||||||||||||||||||||||||||||    
T  51617479 aaatacaccctccggtcactaatataagcaaaa 51617447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 9720228 - 9720295
Alignment:
Q  131 tcttatacataaaacaaactagtggcaaaccttaaacataatcgacttaaaatctcaaatcttaaata 198  Q
    ||||| |||||||||||||||||||||||  |||||   || ||||| ||| ||||||||||||||||    
T  9720228 tcttaaacataaaacaaactagtggcaaaggttaaaaggaaacgactcaaagtctcaaatcttaaata 9720295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 12744894 - 12744945
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||| ||||||||||||||| ||||||||||||  |||||||||| ||||||    
T  12744894 aatagaccctccggtcactattataagcaaaaacttacattttagattcatt 12744945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 51239389 - 51239358
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  51239389 atacaccctccggtcactaatataagcaaaaa 51239358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 52216025 - 52215978
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttca 244  Q
    |||||||||||||||||| |||||||||||| | ||||||||| ||||    
T  52216025 tacaccctccggtcactattataagcaaaaatcaacattttagattca 52215978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 331944 - 331894
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||| ||||||||||||   ||||||||| ||||||    
T  331944 atacaccctccggtcactattataagcaaaaattaacattttagattcatt 331894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 10872818 - 10872768
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||| ||||||||||||  || ||||||| ||||||    
T  10872818 atacaccctccggtcactattataagcaaaaatttatattttagattcatt 10872768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 21404039 - 21404009
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  21404039 tacaccctccggtcactaatataagcaaaaa 21404009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 24075591 - 24075541
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||| |||||| |||| |||||||||||| ||||||||||| ||||||    
T  24075591 atacaccatccggtaactattataagcaaaaatctacattttagattcatt 24075541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Original strand, 29565104 - 29565134
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  29565104 tacaccctccggtcactaatataagcaaaaa 29565134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Original strand, 36362599 - 36362629
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  36362599 tacaccctccggtcactaatataagcaaaaa 36362629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Original strand, 41349655 - 41349685
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  41349655 tacaccctccggtcactaatataagcaaaaa 41349685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 41349806 - 41349776
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  41349806 tacaccctccggtcactaatataagcaaaaa 41349776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 46015669 - 46015719
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||| |||||| |||| |||||||||||||| | ||||||||||||||    
T  46015669 atacaccttccggttactattataagcaaaaaaccatattttaggttcatt 46015719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Original strand, 52168278 - 52168308
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  52168278 tacaccctccggtcactaatataagcaaaaa 52168308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 54690975 - 54690925
Alignment:
Q  197 tacaccctccggtcactaatataagcaa-aaaactacattttaggttcatt 246  Q
    |||||||||||||||||| ||||||||| |||||||||||| || ||||||    
T  54690975 tacaccctccggtcactattataagcaaaaaaactacatttaagattcatt 54690925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 228
Target Start/End: Original strand, 5919425 - 5919458
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaa 228  Q
    |||||||||||||||||| |||||||||||||||    
T  5919425 aatacaccctccggtcacaaatataagcaaaaaa 5919458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 7882276 - 7882325
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||| ||||||||||||   ||||||||| ||||||    
T  7882276 tacaccctccggtcactattataagcaaaaattaacattttagattcatt 7882325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 30519743 - 30519694
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||| |||||||| |||||||||||| | ||||||||| ||||||    
T  30519743 tacaccctctggtcactattataagcaaaaaccaacattttagattcatt 30519694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 38677560 - 38677609
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||| |||||||||||   |||||||||| ||||||    
T  38677560 tacaccctccggtcactattataagcaaaagtttacattttagattcatt 38677609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 39964294 - 39964339
Alignment:
Q  201 ccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||| || ||||||||||||||||| |||||| ||||||    
T  39964294 ccctccggtcattattataagcaaaaaactactttttagattcatt 39964339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 226
Target Start/End: Complemental strand, 40470563 - 40470534
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaa 226  Q
    ||||||||||||||||||||||||||||||    
T  40470563 tacaccctccggtcactaatataagcaaaa 40470534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 54595781 - 54595834
Alignment:
Q  193 taaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||| | ||||||||| |||||||||||| | ||||||||| ||||||    
T  54595781 taaatacaccatacggtcactattataagcaaaaatcaacattttagattcatt 54595834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 51617324 - 51617356
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||| ||||||    
T  51617324 aatacaccctccggtcactaatataaccaaaaa 51617356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 52215875 - 52215923
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcat 245  Q
    |||| ||||||||||||| ||||||||||||  |||||||||| |||||    
T  52215875 tacatcctccggtcactattataagcaaaaatttacattttagattcat 52215923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 24457093 - 24457144
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24457093 aatacaccctccggtcactaatataagcaaaaaattacattttaggttcatt 24457144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 24457246 - 24457196
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24457246 atacaccctccggtcactaatataagcaaaaaactacattttatgttcatt 24457196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 19950112 - 19950161
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19950112 tacaccctccggtcactaatataagcaaaaaactatattttaggttcatt 19950161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 26234015 - 26234068
Alignment:
Q  193 taaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  26234015 taaatacaccctccggtcactaatataagcaaaaaactatattctaggttcatt 26234068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 2060198 - 2060249
Alignment:
Q  196 atacaccctccggtcactaatataagc-aaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2060198 atacaccctccggtcactaatataagcaaaaaaactacattttaggttcatt 2060249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 9431192 - 9431241
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  9431192 tacaccctccggtcactaatataagtaaaaaattacattttaggttcatt 9431241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 29819765 - 29819814
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  29819765 tacaccctccggtcactaatataaacaaaaaactacattttaagttcatt 29819814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 19612935 - 19612985
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||||||||||||| ||| ||||||| ||||||    
T  19612935 atacaccctccggtcactaatataagcaaaaatctatattttagattcatt 19612985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 19950262 - 19950213
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||| |||||||||||||||||||||||| ||||| ||||||||||||||    
T  19950262 tacatcctccggtcactaatataagcaaacaactatattttaggttcatt 19950213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 2060648 - 2060612
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactac 232  Q
    |||||||||||||||||||||||||||||||||||||    
T  2060648 atacaccctccggtcactaatataagcaaaaaactac 2060612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 5574256 - 5574213
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttag 239  Q
    |||||||||||||||||||||||||||||||| |||| ||||||    
T  5574256 atacaccctccggtcactaatataagcaaaaatctactttttag 5574213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 238
Target Start/End: Complemental strand, 38181907 - 38181864
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacatttta 238  Q
    ||||||||||||||| |||| |||||||||||||||||||||||    
T  38181907 aatacaccctccggttactattataagcaaaaaactacatttta 38181864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 15119922 - 15119880
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttag 239  Q
    |||||||||||||||||| |||||||||||| |||||||||||    
T  15119922 tacaccctccggtcactattataagcaaaaatctacattttag 15119880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 26003425 - 26003479
Alignment:
Q  192 ttaaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||| | |||||||||||| | | ||||||||||||||    
T  26003425 ttaaatacaccctccggtcacaattataagcaaaaatcaatattttaggttcatt 26003479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 8266457 - 8266408
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||| |||||||||||| ||||||||||||| || ||||||||||||||    
T  8266457 tacactctccggtcactattataagcaaaaaattatattttaggttcatt 8266408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 21488172 - 21488123
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||| ||||||||| |||||||||||||||| |||||||||| ||||||    
T  21488172 tacactctccggtcattaatataagcaaaaaattacattttagattcatt 21488123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 3098266 - 3098222
Alignment:
Q  202 cctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||    
T  3098266 cctccggtcactattataagcaaaaatctacattttagattcatt 3098222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 25270996 - 25270952
Alignment:
Q  202 cctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||    
T  25270996 cctccggtcactattataagcaaaaatctacattttagattcatt 25270952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 32316563 - 32316515
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttca 244  Q
    ||||| ||||||||||||| |||||||||||||| | ||||||||||||    
T  32316563 atacatcctccggtcactattataagcaaaaaaccatattttaggttca 32316515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 38465782 - 38465826
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacattttag 239  Q
    |||||||||||||||||||| |||||||||||| | |||||||||    
T  38465782 aatacaccctccggtcactattataagcaaaaatcaacattttag 38465826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 38594338 - 38594374
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactac 232  Q
    |||||||||||||||||||||||||||||||| ||||    
T  38594338 atacaccctccggtcactaatataagcaaaaatctac 38594374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 38597934 - 38597970
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactac 232  Q
    |||||||||||||||||||||||||||||||| ||||    
T  38597934 atacaccctccggtcactaatataagcaaaaatctac 38597970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 38598087 - 38598055
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  38598087 aatacaccctccggtcactaatataagcaaaaa 38598055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 3121564 - 3121525
Alignment:
Q  200 accctccggtcactaatataagcaaaaaactacattttag 239  Q
    ||||||||||||||| |||||||||||| |||||||||||    
T  3121564 accctccggtcactattataagcaaaaatctacattttag 3121525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 246
Target Start/End: Complemental strand, 8383324 - 8383281
Alignment:
Q  203 ctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||| | ||||||||||||||||||||||||||| ||||||    
T  8383324 ctccggttattaatataagcaaaaaactacattttagattcatt 8383281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 26234171 - 26234120
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||| |||||||||||   |||||||||| ||||||    
T  26234171 aatacaccctccggtcactattataagcaaaagtttacattttagattcatt 26234120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 38594490 - 38594459
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  38594490 atacaccctccggtcactaatataagcaaaaa 38594459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 226
Target Start/End: Original strand, 1980979 - 1981009
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaa 226  Q
    |||||||||||||||||||||||||||||||    
T  1980979 atacaccctccggtcactaatataagcaaaa 1981009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 3887978 - 3887948
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  3887978 tacaccctccggtcactaatataagcaaaaa 3887948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 8740513 - 8740563
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||| ||| ||||||| |||||||||||| ||||||||||| ||||||    
T  8740513 atacaccatccagtcactattataagcaaaaatctacattttagattcatt 8740563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 9431343 - 9431293
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||| || ||| ||||||||||||||||||  ||||||||||||||    
T  9431343 atacacccttcgatcattaatataagcaaaaaactgtattttaggttcatt 9431293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 13333585 - 13333543
Alignment:
Q  204 tccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||| |||||||||||| ||||||||||| ||||||    
T  13333585 tccggtcactattataagcaaaaatctacattttagattcatt 13333543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 26229440 - 26229490
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||| |||||||||||||  | ||| ||||||||||    
T  26229440 atacaccctccggtcactattataagcaaaaaatcatattgtaggttcatt 26229490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 27331905 - 27331855
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||| ||||||||||||| |||||||||||| | ||||||||| ||||||    
T  27331905 atacatcctccggtcactattataagcaaaaatcaacattttagattcatt 27331855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 226
Target Start/End: Original strand, 37195046 - 37195076
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaa 226  Q
    |||||||||||||||||||||||||||||||    
T  37195046 atacaccctccggtcactaatataagcaaaa 37195076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 31024162 - 31024215
Alignment:
Q  193 taaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||| ||| ||||||||| |||||||||||| | ||||||||| ||||||    
T  31024162 taaatacatcctacggtcactattataagcaaaaatcaacattttagattcatt 31024215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 38465934 - 38465885
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||| ||||||| | |||||||||| ||||||||||| ||||||    
T  38465934 tacaccctccagtcactattgtaagcaaaaatctacattttagattcatt 38465885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 40363226 - 40363263
Alignment:
Q  209 tcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  40363226 tcactattataagcaaaaaactactttttaggttcatt 40363263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 41057025 - 41056984
Alignment:
Q  205 ccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||| |||||||||||| ||||||||||| ||||||    
T  41057025 ccggtcactattataagcaaaaatctacattttagattcatt 41056984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 10602442 - 10602390
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||| |||||| |||||  |||| |||| |||||||    
T  10602442 aaatacaccctccggtcactattataagaaaaaatatacaatttaagttcatt 10602390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 41805266 - 41805298
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaa 226  Q
    ||||||||||||||||||||| |||||||||||    
T  41805266 aaatacaccctccggtcactattataagcaaaa 41805298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 44587635 - 44587687
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||| ||||||||||| || ||||||||||| ||||  |||||||||||||    
T  44587635 aaatactccctccggtcattattataagcaaaatactattttttaggttcatt 44587687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 56328595 - 56328546
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  56328595 tacaccctccggtcactaatataagcaaaaaactacattttagattcatt 56328546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 21884012 - 21884063
Alignment:
Q  196 atacaccctccggtcactaatataagc-aaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21884012 atacaccctccggtcactaatataagcaaaaaaactacattttaggttcatt 21884063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 56328443 - 56328494
Alignment:
Q  196 atacaccctccggtcactaatataagc-aaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  56328443 atacaccctccggtcactaatataagcaaaaaaactacattttaggttcatt 56328494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 49482026 - 49481976
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  49482026 atacaccctccggtcactaatataagcaaaaaactacattctaggtacatt 49481976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 16468199 - 16468248
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  16468199 tacatcctccggtcactaatataagcaaaaaattacattttaggttcatt 16468248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 21884164 - 21884115
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  21884164 tacaccctccggtcattaatataagcaaaaaactatattttaggttcatt 21884115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 51232266 - 51232315
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  51232266 tacaccttccggtcactaatataagtaaaaaactacattttaggttcatt 51232315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 4044438 - 4044394
Alignment:
Q  202 cctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  4044438 cctccggtcactaatataagcaaaaaactacattttatgttcatt 4044394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 24851556 - 24851506
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  24851556 atacaccctccggtcactattataagcaaaaaaccatattttaggttcatt 24851506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 14450951 - 14451001
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||| |||||| |||||||||||| ||||||||||| ||||||    
T  14450951 atacaccctccgatcactattataagcaaaaatctacattttagattcatt 14451001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 20294573 - 20294527
Alignment:
Q  200 accctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||| |||||||||||||||  |||||||||||||||||    
T  20294573 accctccggtcattaatataagcaaaaatttacattttaggttcatt 20294527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 54713092 - 54713142
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||| ||||||||||||  |||||||||| ||||||    
T  54713092 atacaccctccggtcactattataagcaaaaatttacattttagattcatt 54713142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 2440905 - 2440954
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||| |||| |||||||||||||||||||| || ||||||||||||||    
T  2440905 tacaccatccgatcactaatataagcaaaaaattatattttaggttcatt 2440954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 14451102 - 14451053
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||| |||| ||||||||||||||||||||  |||||||||||||||||    
T  14451102 tacactctcctgtcactaatataagcaaaaatttacattttaggttcatt 14451053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 23071551 - 23071502
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||||||| ||||||||| || ||||||||| ||||    
T  23071551 tacaccctccggtcactaatatgagcaaaaaattatattttaggtccatt 23071502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 54164961 - 54164909
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||| |||||||||||| |||  |||||| ||||||    
T  54164961 aaatacaccctccggtcactattataagcaaaaatctattttttagattcatt 54164909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 6126799 - 6126760
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaaaactacat 234  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  6126799 aatacaccctccggtcactattataagcaaaaaaatacat 6126760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 246
Target Start/End: Original strand, 20215564 - 20215611
Alignment:
Q  199 caccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||| ||||||||||||   ||||||||||||||||    
T  20215564 caccctccggtcactattataagcaaaaattgacattttaggttcatt 20215611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 21224832 - 21224781
Alignment:
Q  196 atacaccctccggtcactaatataagc-aaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||    
T  21224832 atacaccctccggtcactattataaacaaaaaaactacattttagattcatt 21224781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 226
Target Start/End: Complemental strand, 28702208 - 28702177
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaa 226  Q
    ||||||||||||||||||||||||||||||||    
T  28702208 aatacaccctccggtcactaatataagcaaaa 28702177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 54713245 - 54713194
Alignment:
Q  196 atacaccctccggtcactaatataagcaa-aaaactacattttaggttcatt 246  Q
    |||||||||||| ||| |||||||||||| ||||||||||| ||||||||||    
T  54713245 atacaccctccgatcattaatataagcaaaaaaactacattctaggttcatt 54713194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 4044292 - 4044342
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||| ||| ||||||||||||||| |||||| ||||||||| |||||||    
T  4044292 atacactctctggtcactaatataagtaaaaaattacattttaagttcatt 4044342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 4406228 - 4406278
Alignment:
Q  189 atcttaaatacaccctccggtcactaatataagcaaaaaactacattttag 239  Q
    |||||||||||||| ||||||||||| |||||| ||||| | |||||||||    
T  4406228 atcttaaatacaccatccggtcactattataagtaaaaatcaacattttag 4406278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 19878145 - 19878191
Alignment:
Q  200 accctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||||||||||||||||||   ||||||||| ||||||    
T  19878145 accctccggtcactaatataagcaaaaattaacattttagattcatt 19878191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 22235406 - 22235356
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||| |||||||||||||| |||||||||||||  ||||||||| ||||||    
T  22235406 atactccctccggtcactattataagcaaaaaatcacattttagattcatt 22235356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 226
Target Start/End: Original strand, 28702055 - 28702085
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaa 226  Q
    |||||||||||||||||||||||||||||||    
T  28702055 atacaccctccggtcactaatataagcaaaa 28702085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 51232417 - 51232367
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||| |||| |||||||||||||  ||||||||||||||| |||||||    
T  51232417 atacaccatccgctcactaatataagttaaaaactacattttaagttcatt 51232367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 52817712 - 52817682
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  52817712 tacaccctccggtcactaatataagcaaaaa 52817682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 55087856 - 55087826
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  55087856 tacaccctccggtcactaatataagcaaaaa 55087826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 2441054 - 2441006
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||| ||||||||||||| ||||||  |||||||||||||||||||||||    
T  2441054 tacatcctccggtcacta-tataagttaaaaactacattttaggttcatt 2441006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 5281283 - 5281250
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||| |||||    
T  5281283 aaatacaccctccggtcactaatataagtaaaaa 5281250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 246
Target Start/End: Original strand, 38381976 - 38382020
Alignment:
Q  202 cctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||    
T  38381976 cctccggtcactattataagcaaaaatttacattttagattcatt 38382020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 39160954 - 39160910
Alignment:
Q  202 cctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||| ||||| |||||| ||||||||||| ||||||    
T  39160954 cctccggtcactattataaacaaaaatctacattttagattcatt 39160910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 47181559 - 47181595
Alignment:
Q  202 cctccggtcactaatataagcaaaaaactacatttta 238  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  47181559 cctccggtcactattataagcaaaaatctacatttta 47181595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 56364466 - 56364422
Alignment:
Q  202 cctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||| |||||| ||||| ||||||||||| ||||||    
T  56364466 cctccggtcactattataagtaaaaatctacattttagattcatt 56364422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 4369 - 4418
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  4369 tacaccctccggtcactattataagcaaaaaaccatattttaggttcatt 4418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 6205 - 6257
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||||| ||||||||||||||||||||| |||||||| | ||||||    
T  6205 aaatacaccctccagtcactaatataagcaaaaaattacattttcgattcatt 6257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 6359 - 6309
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    ||||||||||| |||| ||||||||| |||||| |||||||||||||||||    
T  6359 atacaccctccagtcattaatataagtaaaaaattacattttaggttcatt 6309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 61155 - 61188
Alignment:
Q  194 aaatacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||||    
T  61155 aaatacaccctccggtcactaatataagcaaaaa 61188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 61307 - 61265
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttag 239  Q
    |||||||||||||||||||||||| |||||| | |||||||||    
T  61307 tacaccctccggtcactaatataaacaaaaatccacattttag 61265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 139441 - 139392
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaaactacattttaggttcatt 246  Q
    |||||||||| |||||| |||||||||||||| |||||||||| ||||||    
T  139441 tacaccctcccgtcactcatataagcaaaaaattacattttagattcatt 139392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 54382 - 54425
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaaactacattttag 239  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||    
T  54382 atacaccctccggttactaatataagcaaaaatctactttttag 54425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 226
Target Start/End: Original strand, 120138 - 120169
Alignment:
Q  195 aatacaccctccggtcactaatataagcaaaa 226  Q
    ||||||||||||||||||||||||||||||||    
T  120138 aatacaccctccggtcactaatataagcaaaa 120169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 120291 - 120260
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  120291 atacaccctccggtcactaatataagcaaaaa 120260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Original strand, 3945 - 3975
Alignment:
Q  197 tacaccctccggtcactaatataagcaaaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  3945 tacaccctccggtcactaatataagcaaaaa 3975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 226
Target Start/End: Original strand, 17161 - 17191
Alignment:
Q  196 atacaccctccggtcactaatataagcaaaa 226  Q
    |||||||||||||||||||||||||||||||    
T  17161 atacaccctccggtcactaatataagcaaaa 17191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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