View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13555_low_24 (Length: 219)
Name: NF13555_low_24
Description: NF13555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13555_low_24 |
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Alignment Details
Target: chr5 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 15631005 - 15631160
Alignment:
| Q |
21 |
tttgcatctcgcaaagtaaagtatcgctcattttggtgaatgccatagattgcacacgtaactagtttgataatatcaagtgctcgttagggtattcatc |
120 |
Q |
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| T |
15631005 |
tttgcatctcgcagagtaaagtatcgctcattttggtgaatgccatagattgcacacgtaactaatttgataatatcaagtgctcgttagggtattcatc |
15631104 |
T |
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| Q |
121 |
tccaagccaccaaggacttttcccacccttgatcacgac-ttcgcatctccctcat |
175 |
Q |
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||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |
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| T |
15631105 |
tccaagccaccaaggacttttcccacccttgatcacgactttggcatctccctcat |
15631160 |
T |
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