View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13557_high_9 (Length: 268)

Name: NF13557_high_9
Description: NF13557
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13557_high_9
NF13557_high_9
[»] chr6 (40 HSPs)
chr6 (19-213)||(30781163-30781347)
chr6 (88-211)||(34446573-34446690)
chr6 (157-211)||(6389751-6389805)
chr6 (89-137)||(31959220-31959268)
chr6 (87-211)||(34894967-34895085)
chr6 (88-139)||(7625184-7625235)
chr6 (156-211)||(17168459-17168514)
chr6 (91-137)||(8389411-8389457)
chr6 (88-138)||(8776908-8776958)
chr6 (88-138)||(28152167-28152217)
chr6 (88-138)||(34595203-34595253)
chr6 (88-137)||(9107299-9107348)
chr6 (162-211)||(12235521-12235570)
chr6 (160-211)||(12086345-12086396)
chr6 (156-211)||(19602177-19602232)
chr6 (167-211)||(9195761-9195805)
chr6 (88-160)||(32313463-32313535)
chr6 (88-135)||(3209471-3209518)
chr6 (168-211)||(7569176-7569219)
chr6 (166-209)||(9024182-9024225)
chr6 (91-138)||(9025448-9025495)
chr6 (87-138)||(9027236-9027287)
chr6 (87-138)||(16766777-16766828)
chr6 (156-211)||(26247434-26247489)
chr6 (87-137)||(7938170-7938220)
chr6 (88-138)||(8365448-8365498)
chr6 (88-138)||(17327590-17327640)
chr6 (157-211)||(34541747-34541801)
chr6 (88-137)||(7248439-7248488)
chr6 (88-208)||(10339054-10339174)
chr6 (89-138)||(31384999-31385048)
chr6 (167-211)||(6299520-6299564)
chr6 (167-211)||(6306330-6306374)
chr6 (167-211)||(7086803-7086847)
chr6 (167-211)||(7265600-7265644)
chr6 (167-211)||(9025501-9025545)
chr6 (167-211)||(10842540-10842584)
chr6 (89-137)||(17841530-17841578)
chr6 (167-211)||(19040360-19040404)
chr6 (167-211)||(26178688-26178732)
[»] chr3 (50 HSPs)
chr3 (88-211)||(52369783-52369906)
chr3 (87-211)||(25074797-25074915)
chr3 (88-211)||(21211296-21211413)
chr3 (87-211)||(8903440-8903555)
chr3 (88-138)||(40052381-40052431)
chr3 (156-211)||(12704653-12704708)
chr3 (86-151)||(2408588-2408653)
chr3 (162-211)||(3730167-3730216)
chr3 (88-137)||(34185052-34185101)
chr3 (167-211)||(1830351-1830395)
chr3 (167-211)||(20691327-20691371)
chr3 (90-211)||(24204983-24205092)
chr3 (90-138)||(25775576-25775624)
chr3 (87-209)||(8039216-8039338)
chr3 (160-211)||(15864841-15864892)
chr3 (156-211)||(25892468-25892523)
chr3 (87-138)||(27505320-27505371)
chr3 (87-138)||(55401144-55401195)
chr3 (88-134)||(49651716-49651762)
chr3 (91-148)||(12100328-12100385)
chr3 (88-203)||(4704220-4704335)
chr3 (90-138)||(4987222-4987270)
chr3 (88-211)||(8039764-8039886)
chr3 (167-211)||(13799512-13799556)
chr3 (88-136)||(20503536-20503584)
chr3 (175-211)||(21149075-21149111)
chr3 (167-211)||(34189435-34189479)
chr3 (88-136)||(40993275-40993323)
chr3 (156-211)||(14223849-14223904)
chr3 (87-138)||(17276796-17276847)
chr3 (156-207)||(21367289-21367340)
chr3 (160-211)||(25365470-25365521)
chr3 (156-211)||(34307776-34307831)
chr3 (88-138)||(11610578-11610628)
chr3 (87-137)||(16789584-16789634)
chr3 (88-138)||(18427018-18427068)
chr3 (88-138)||(25064987-25065037)
chr3 (88-138)||(35223007-35223057)
chr3 (88-138)||(41961579-41961629)
chr3 (89-210)||(1389835-1389956)
chr3 (88-129)||(3730108-3730149)
chr3 (89-138)||(14216972-14217021)
chr3 (89-138)||(14223101-14223150)
chr3 (89-138)||(15999951-16000000)
chr3 (178-211)||(16789668-16789701)
chr3 (166-211)||(49505160-49505205)
chr3 (88-211)||(9800048-9800170)
chr3 (88-124)||(21861658-21861694)
chr3 (167-211)||(32804547-32804591)
chr3 (167-211)||(40150578-40150622)
[»] chr4 (49 HSPs)
chr4 (88-211)||(31243476-31243599)
chr4 (92-211)||(20743210-20743329)
chr4 (101-211)||(32910559-32910669)
chr4 (88-208)||(17876166-17876285)
chr4 (88-211)||(24343515-24343632)
chr4 (87-211)||(7012074-7012198)
chr4 (88-211)||(3144587-3144703)
chr4 (88-148)||(53381530-53381590)
chr4 (88-211)||(19230241-19230360)
chr4 (88-138)||(19482748-19482798)
chr4 (88-211)||(39507059-39507170)
chr4 (88-211)||(18513175-18513292)
chr4 (88-138)||(23292926-23292976)
chr4 (89-138)||(3947702-3947751)
chr4 (88-161)||(10133755-10133828)
chr4 (88-136)||(29205539-29205587)
chr4 (103-209)||(944617-944717)
chr4 (127-210)||(6273953-6274036)
chr4 (87-134)||(12895213-12895260)
chr4 (156-199)||(23386166-23386209)
chr4 (89-211)||(30982808-30982929)
chr4 (88-131)||(40784029-40784072)
chr4 (88-142)||(16184896-16184950)
chr4 (88-138)||(22234819-22234869)
chr4 (88-136)||(715545-715593)
chr4 (88-136)||(752871-752919)
chr4 (167-211)||(5775365-5775409)
chr4 (88-211)||(11931288-11931410)
chr4 (163-211)||(34515877-34515925)
chr4 (170-210)||(49659533-49659573)
chr4 (168-211)||(5654599-5654642)
chr4 (91-138)||(28084593-28084640)
chr4 (168-211)||(47191001-47191044)
chr4 (174-212)||(2976701-2976739)
chr4 (173-211)||(10546156-10546194)
chr4 (88-138)||(34306744-34306794)
chr4 (88-138)||(35161105-35161155)
chr4 (168-210)||(46180944-46180986)
chr4 (175-212)||(8457932-8457969)
chr4 (91-148)||(46715416-46715473)
chr4 (87-139)||(941313-941365)
chr4 (88-136)||(11596297-11596345)
chr4 (167-211)||(14465301-14465345)
chr4 (90-138)||(22440559-22440607)
chr4 (168-211)||(30520444-30520488)
chr4 (167-211)||(33950144-33950188)
chr4 (88-136)||(35157925-35157973)
chr4 (88-136)||(40699887-40699935)
chr4 (159-211)||(53968554-53968606)
[»] chr2 (35 HSPs)
chr2 (88-209)||(11307934-11308053)
chr2 (88-211)||(10535685-10535810)
chr2 (144-211)||(25544489-25544556)
chr2 (89-211)||(23354582-23354703)
chr2 (90-211)||(23354926-23355046)
chr2 (101-211)||(24011044-24011148)
chr2 (88-211)||(30563417-30563540)
chr2 (88-211)||(38919214-38919336)
chr2 (88-142)||(37419819-37419873)
chr2 (88-136)||(18622673-18622721)
chr2 (88-136)||(18840953-18841001)
chr2 (88-138)||(37559046-37559096)
chr2 (167-211)||(34006998-34007042)
chr2 (168-211)||(12748692-12748735)
chr2 (90-136)||(2438661-2438707)
chr2 (88-138)||(26769591-26769641)
chr2 (88-138)||(38117099-38117149)
chr2 (166-211)||(18570980-18571025)
chr2 (89-137)||(44860401-44860449)
chr2 (87-138)||(42511321-42511372)
chr2 (167-205)||(8300226-8300264)
chr2 (88-138)||(15972942-15972992)
chr2 (173-211)||(36281693-36281731)
chr2 (88-138)||(41843515-41843565)
chr2 (88-137)||(15909570-15909619)
chr2 (87-136)||(19980746-19980795)
chr2 (174-211)||(22085012-22085049)
chr2 (166-211)||(27286298-27286343)
chr2 (89-138)||(28596538-28596587)
chr2 (88-137)||(34993922-34993971)
chr2 (167-211)||(4229415-4229459)
chr2 (88-136)||(11223793-11223841)
chr2 (167-211)||(12668430-12668474)
chr2 (167-211)||(18889598-18889642)
chr2 (158-202)||(30394474-30394518)
[»] chr8 (43 HSPs)
chr8 (90-211)||(44067524-44067644)
chr8 (89-211)||(13009423-13009544)
chr8 (88-211)||(40063959-40064081)
chr8 (131-211)||(13845242-13845322)
chr8 (88-139)||(29510233-29510284)
chr8 (160-211)||(35431140-35431191)
chr8 (87-211)||(39820437-39820548)
chr8 (162-211)||(28883880-28883929)
chr8 (88-148)||(38487157-38487217)
chr8 (160-211)||(1676720-1676771)
chr8 (87-137)||(22652057-22652107)
chr8 (166-211)||(3025559-3025604)
chr8 (88-137)||(30067968-30068017)
chr8 (90-138)||(926730-926778)
chr8 (131-211)||(18130504-18130583)
chr8 (87-139)||(36450693-36450745)
chr8 (87-134)||(15816057-15816104)
chr8 (162-209)||(22850354-22850401)
chr8 (173-212)||(29198492-29198531)
chr8 (89-139)||(2035816-2035866)
chr8 (157-211)||(8017494-8017548)
chr8 (88-138)||(8343396-8343446)
chr8 (88-134)||(11944749-11944795)
chr8 (173-211)||(12559119-12559157)
chr8 (110-211)||(14513130-14513225)
chr8 (88-130)||(16641909-16641951)
chr8 (153-207)||(26609758-26609812)
chr8 (169-211)||(30068037-30068079)
chr8 (88-137)||(8343037-8343086)
chr8 (88-157)||(9402046-9402115)
chr8 (92-161)||(14659639-14659708)
chr8 (88-133)||(17751730-17751775)
chr8 (88-133)||(17760717-17760762)
chr8 (101-138)||(22943302-22943339)
chr8 (87-160)||(24413498-24413570)
chr8 (156-205)||(26915236-26915285)
chr8 (88-136)||(3454578-3454626)
chr8 (88-136)||(13403177-13403225)
chr8 (167-211)||(13844603-13844647)
chr8 (90-130)||(16987990-16988030)
chr8 (176-212)||(28810335-28810371)
chr8 (87-131)||(34127171-34127215)
chr8 (167-211)||(34897093-34897137)
[»] chr7 (41 HSPs)
chr7 (93-211)||(43250001-43250118)
chr7 (88-209)||(7133212-7133327)
chr7 (156-211)||(29812660-29812715)
chr7 (103-211)||(5938480-5938582)
chr7 (88-137)||(6490786-6490835)
chr7 (87-208)||(23930230-23930351)
chr7 (89-137)||(32287404-32287452)
chr7 (87-138)||(14729772-14729823)
chr7 (88-138)||(5409771-5409821)
chr7 (86-138)||(598277-598329)
chr7 (88-211)||(38804489-38804606)
chr7 (86-138)||(43027402-43027454)
chr7 (160-211)||(23751908-23751959)
chr7 (88-138)||(32093954-32094005)
chr7 (89-211)||(32308128-32308249)
chr7 (88-138)||(9778574-9778624)
chr7 (88-138)||(17852069-17852119)
chr7 (87-137)||(24105748-24105798)
chr7 (167-208)||(18233605-18233646)
chr7 (90-138)||(22868116-22868164)
chr7 (88-211)||(24339650-24339772)
chr7 (167-211)||(38134413-38134457)
chr7 (91-134)||(2533761-2533804)
chr7 (156-211)||(4017790-4017845)
chr7 (160-211)||(12278843-12278894)
chr7 (156-211)||(17780080-17780135)
chr7 (88-143)||(21138931-21138986)
chr7 (87-138)||(29763128-29763179)
chr7 (87-137)||(1433529-1433579)
chr7 (177-211)||(16341504-16341538)
chr7 (90-211)||(26033392-26033512)
chr7 (166-208)||(37775993-37776035)
chr7 (166-211)||(4909159-4909204)
chr7 (87-140)||(30813864-30813917)
chr7 (167-211)||(7328698-7328742)
chr7 (167-211)||(20427642-20427686)
chr7 (88-136)||(21880223-21880271)
chr7 (167-211)||(22683762-22683806)
chr7 (119-211)||(25239663-25239754)
chr7 (92-136)||(40287306-40287350)
chr7 (175-211)||(44172905-44172941)
[»] chr5 (40 HSPs)
chr5 (86-211)||(2419865-2419988)
chr5 (156-211)||(43554529-43554584)
chr5 (156-210)||(39695995-39696049)
chr5 (88-205)||(26205694-26205805)
chr5 (162-212)||(31264445-31264495)
chr5 (88-137)||(17393305-17393354)
chr5 (155-211)||(5467973-5468029)
chr5 (88-136)||(38464313-38464361)
chr5 (87-138)||(2436980-2437031)
chr5 (87-138)||(17593662-17593713)
chr5 (173-211)||(2577193-2577231)
chr5 (88-138)||(14873591-14873641)
chr5 (157-211)||(18607094-18607148)
chr5 (169-211)||(21577117-21577159)
chr5 (162-211)||(18288053-18288102)
chr5 (159-212)||(21137696-21137749)
chr5 (85-138)||(21576682-21576735)
chr5 (167-212)||(28588681-28588726)
chr5 (170-211)||(42469229-42469270)
chr5 (88-136)||(19820328-19820376)
chr5 (90-138)||(21190998-21191046)
chr5 (88-211)||(30098334-30098456)
chr5 (88-211)||(39698549-39698671)
chr5 (168-211)||(19293431-19293474)
chr5 (156-211)||(25863212-25863267)
chr5 (88-135)||(37328775-37328822)
chr5 (90-148)||(7997108-7997166)
chr5 (96-138)||(17088360-17088402)
chr5 (88-138)||(35017112-35017162)
chr5 (91-137)||(39268541-39268587)
chr5 (174-211)||(4344750-4344787)
chr5 (87-136)||(7677787-7677836)
chr5 (174-211)||(11596469-11596506)
chr5 (88-137)||(43564951-43565000)
chr5 (167-211)||(2548395-2548439)
chr5 (88-136)||(17123119-17123166)
chr5 (88-136)||(19552476-19552524)
chr5 (168-208)||(21194213-21194253)
chr5 (167-211)||(23015996-23016040)
chr5 (167-211)||(36838551-36838595)
[»] scaffold0007 (1 HSPs)
scaffold0007 (90-211)||(225199-225319)
[»] chr1 (51 HSPs)
chr1 (88-211)||(6936334-6936451)
chr1 (88-211)||(40747707-40747824)
chr1 (156-211)||(42004943-42004998)
chr1 (88-211)||(9828052-9828174)
chr1 (88-211)||(20157284-20157401)
chr1 (88-139)||(46940748-46940799)
chr1 (157-211)||(39101179-39101233)
chr1 (87-148)||(22794017-22794078)
chr1 (88-136)||(5944365-5944413)
chr1 (88-211)||(17831462-17831582)
chr1 (87-138)||(19562555-19562605)
chr1 (90-137)||(42359391-42359438)
chr1 (88-138)||(18190048-18190098)
chr1 (88-138)||(40917829-40917879)
chr1 (93-138)||(1209822-1209867)
chr1 (90-211)||(1486646-1486760)
chr1 (89-137)||(10233326-10233374)
chr1 (90-138)||(17778622-17778670)
chr1 (167-211)||(36878469-36878513)
chr1 (88-131)||(7918154-7918197)
chr1 (90-137)||(16297223-16297270)
chr1 (88-138)||(6427544-6427594)
chr1 (88-138)||(9690213-9690263)
chr1 (158-211)||(21145474-21145528)
chr1 (88-134)||(21365992-21366038)
chr1 (88-134)||(22515827-22515873)
chr1 (88-138)||(37598900-37598950)
chr1 (174-211)||(3921675-3921712)
chr1 (89-138)||(6414932-6414981)
chr1 (168-209)||(6573999-6574040)
chr1 (166-211)||(7918217-7918262)
chr1 (89-138)||(16011290-16011339)
chr1 (93-138)||(23219608-23219653)
chr1 (88-137)||(29144320-29144369)
chr1 (166-211)||(30847726-30847771)
chr1 (175-212)||(31667432-31667469)
chr1 (166-211)||(34712389-34712434)
chr1 (178-211)||(42325568-42325601)
chr1 (167-212)||(44296502-44296546)
chr1 (167-211)||(373055-373099)
chr1 (167-211)||(398772-398816)
chr1 (167-211)||(1864887-1864931)
chr1 (88-124)||(9630561-9630597)
chr1 (167-211)||(11412775-11412819)
chr1 (91-139)||(11634066-11634114)
chr1 (167-211)||(11634131-11634175)
chr1 (167-211)||(22794085-22794129)
chr1 (88-132)||(22881567-22881611)
chr1 (167-211)||(24176374-24176418)
chr1 (87-131)||(27965939-27965983)
chr1 (88-136)||(47989579-47989627)
[»] scaffold0652 (1 HSPs)
scaffold0652 (89-139)||(403-453)
[»] scaffold0049 (1 HSPs)
scaffold0049 (89-209)||(56932-57052)
[»] scaffold0598 (1 HSPs)
scaffold0598 (159-211)||(8052-8104)
[»] scaffold0128 (1 HSPs)
scaffold0128 (89-137)||(32774-32822)
[»] scaffold0199 (1 HSPs)
scaffold0199 (160-211)||(1957-2008)
[»] scaffold0003 (2 HSPs)
scaffold0003 (88-147)||(236914-236973)
scaffold0003 (88-138)||(241674-241724)
[»] scaffold0793 (1 HSPs)
scaffold0793 (88-136)||(4821-4869)
[»] scaffold0020 (1 HSPs)
scaffold0020 (88-138)||(135263-135313)
[»] scaffold0019 (1 HSPs)
scaffold0019 (88-138)||(71805-71855)
[»] scaffold0008 (1 HSPs)
scaffold0008 (90-211)||(263303-263423)
[»] scaffold0086 (1 HSPs)
scaffold0086 (87-160)||(2987-3059)
[»] scaffold0450 (1 HSPs)
scaffold0450 (88-160)||(8564-8635)
[»] scaffold0085 (1 HSPs)
scaffold0085 (167-211)||(26006-26050)


Alignment Details
Target: chr6 (Bit Score: 134; Significance: 8e-70; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 19 - 213
Target Start/End: Original strand, 30781163 - 30781347
Alignment:
Q  19 gtctacttgttagtgtgcctgtgtttcatagcttgcagcaccaacattt-ctaatcgaagatgtgtttggctatgaagcacgaacactcctcggattaag 117  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30781163 gtctacttgttagtgtgcctgtgtttcatagcttgcaacaccgacattttctaatcgaagatgtgtttggctatgaagcacgaacactcctcggattaag 30781262  T
Q  118 tgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaattatgtcattttctcaaattattaca 213  Q
    ||||||||||||           ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30781263 tgtgtcccggtg-----------tcagtgtctgatattgacaccgacatgacacctatgattacaattaattatgtcattttctcaaattattaca 30781347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 88 - 211
Target Start/End: Complemental strand, 34446690 - 34446573
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    |||||||||||| |||||||| |||||| ||||||||| ||||| || |||| || |||| ||     |||||||||| |||||||||||||||||| ||    
T  34446690 ctatgaagcacggacactccttggattaggtgtgtcccagtgtcagatacgcgtcggtgt-tg-----gacaccgacacgacacctatgattacactgaa 34446597  T
Q  188 ttatgtcattttctcaaattatta 211  Q
    ||||||||||||||||||||||||    
T  34446596 ttatgtcattttctcaaattatta 34446573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 6389805 - 6389751
Alignment:
Q  157 acaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||| |||||||||||||||||| |||||| |||||||||||||||||||    
T  6389805 acaccgacacgacacctatgattacactaaattatatcattttctcaaattatta 6389751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 31959268 - 31959220
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 31959220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 211
Target Start/End: Original strand, 34894967 - 34895085
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacactta 186  Q
    ||||||||||||| |||||||||  |||| ||||||||| |||||||||| |||| ||| || || | ||||||     ||||||||||||||||||| |    
T  34894967 gctatgaagcacggacactcctcatattaggtgtgtccctgtgtcggacaagcattagtttccgaca-tgacac-----tgacacctatgattacactga 34895060  T
Q  187 attatgtcattttctcaaattatta 211  Q
    ||| | | |||||||||||||||||    
T  34895061 attgtataattttctcaaattatta 34895085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 139
Target Start/End: Complemental strand, 7625235 - 7625184
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgc 139  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||||||    
T  7625235 ctatgaagcacgaacactccttggattaagcgtgttccggtgtcggacacgc 7625184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 17168459 - 17168514
Alignment:
Q  156 gacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||| ||||||||| |||||||| |||||| |||||||||||||||||||    
T  17168459 gacaccgacacgacacctattattacactaaattatatcattttctcaaattatta 17168514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 8389411 - 8389457
Alignment:
Q  91 tgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 8389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 8776908 - 8776958
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  8776908 ctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacg 8776958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 28152217 - 28152167
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||||||||||||||||||| |  |||||||||||||||||||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacg 28152167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 34595253 - 34595203
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacg 34595203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 9107299 - 9107348
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    ||||||||||||  |||||||||||||| |||||||||||||||||||||    
T  9107299 ctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacac 9107348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 12235521 - 12235570
Alignment:
Q  162 gacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||    
T  12235521 gacacgacacctatgattacactgaattatgtcattttctctaattatta 12235570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 12086345 - 12086396
Alignment:
Q  160 ccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||||||||||    
T  12086345 ccgacacgacacctatgattaaactgaattatgtcattatctcaaattatta 12086396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 19602177 - 19602232
Alignment:
Q  156 gacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||||  | ||||||||||||||| |||||| |||||||||||||||||||    
T  19602177 gacaccgacacaatacctatgattacactgaattatatcattttctcaaattatta 19602232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 9195761 - 9195805
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| ||| |||||||| ||||||||||||||||||||||||||    
T  9195761 gacacatataattacactaaattatgtcattttctcaaattatta 9195805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 32313535 - 32313463
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacac 160  Q
    |||||||||||| ||| | ||||| |||||||||||||||||| |||||  | ||||||||||| || |||||    
T  32313535 ctatgaagcacggacatttctcgggttaagtgtgtcccggtgttggacatacgtcagtgtctgacaccgacac 32313463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 3209518 - 3209471
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggac 135  Q
    ||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  3209518 ctatgaagcacaaacactcctcggattaggcgtgtccgggtgtcggac 3209471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 7569176 - 7569219
Alignment:
Q  168 acacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||| |||||||| |||||||| |||||||||||||||||    
T  7569176 acacctataattacactgaattatgtaattttctcaaattatta 7569219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 9024182 - 9024225
Alignment:
Q  166 tgacacctatgattacacttaattatgtcattttctcaaattat 209  Q
    |||||| |||||||||| | ||||||||||||||||||||||||    
T  9024182 tgacacatatgattacattgaattatgtcattttctcaaattat 9024225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 9025448 - 9025495
Alignment:
Q  91 tgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||| ||||| ||||||||| | ||||||||||||||||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacg 9025495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 9027287 - 9027236
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| ||||||||| ||||||   ||||||||||||||||||||    
T  9027287 gctatgaagcacaaacactccttggattagccgtgtcccggtgtcggacacg 9027236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 16766828 - 16766777
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||||||| ||| || |||||||| | ||||||||||||||||||||    
T  16766828 gctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacg 16766777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 26247489 - 26247434
Alignment:
Q  156 gacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||| || ||||||||||| ||| || ||||||||||||| |||||||||    
T  26247489 gacaccgacacgaaacctatgattatactaaaatatgtcattttcttaaattatta 26247434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 7938220 - 7938170
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    ||||||||||||| ||||||||||||| | | ||||| |||||||||||||    
T  7938220 gctatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggacac 7938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 8365448 - 8365498
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| | ||||||||||||| | ||||||| ||||||||||||    
T  8365448 ctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacg 8365498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 17327590 - 17327640
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| ||||||||||||||| | ||||||| ||||| ||||||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacg 17327640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 34541747 - 34541801
Alignment:
Q  157 acaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||||||||| |||||||||| | |||| ||||||||| || ||||||||    
T  34541747 acaccgacatgacacatatgattacattgaattttgtcattttttctaattatta 34541801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 7248488 - 7248439
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    |||||||||||| ||||||||||||||    |||||||||||||||||||    
T  7248488 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacac 7248439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 208
Target Start/End: Original strand, 10339054 - 10339174
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgatt-acactta 186  Q
    |||||||||||| ||||||||| ||||| | ||||||| |||||||||| |  || ||||| || || ||||| |   |||||| ||| ||| ||||| |    
T  10339054 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtc-gtgtccgacaccgacacggcactgacacatataattaacactga 10339152  T
Q  187 attatgtcattttctcaaatta 208  Q
    ||||||| ||||||||||||||    
T  10339153 attatgtgattttctcaaatta 10339174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 31385048 - 31384999
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||||| |||||||| |||||| | |||||||||||| |||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacg 31384999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 6299564 - 6299520
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||| |||||| | |||||| |||||||||||||||||||    
T  6299564 gacacctatcattacattgaattatatcattttctcaaattatta 6299520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 6306374 - 6306330
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||| |||||| | |||||| |||||||||||||||||||    
T  6306374 gacacctatcattacattgaattatatcattttctcaaattatta 6306330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 7086847 - 7086803
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| ||| |||||||| |||||||| |||||||||||||||||    
T  7086847 gacacatataattacactaaattatgtgattttctcaaattatta 7086803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 7265600 - 7265644
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| ||| |||||||| |||||||| |||||||||||||||||    
T  7265600 gacacatataattacactgaattatgtgattttctcaaattatta 7265644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 9025501 - 9025545
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| ||| |||||||| |||||||| |||||||||||||||||    
T  9025501 gacacatataattacactgaattatgtgattttctcaaattatta 9025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 10842584 - 10842540
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| |||||||||||| |||||||| ||||| |||||||||||    
T  10842584 gacacatatgattacactaaattatgtgattttttcaaattatta 10842540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 17841530 - 17841578
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    ||||||||||| ||||||||||||||| | ||||| | |||||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacac 17841578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 19040404 - 19040360
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| ||| |||||||| |||||||| |||||||||||||||||    
T  19040404 gacacatataattacactgaattatgtgattttctcaaattatta 19040360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 26178688 - 26178732
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| |||||||||||| |||||||| ||||| |||||||||||    
T  26178688 gacacatatgattacactaaattatgtgattttatcaaattatta 26178732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 3e-35; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 88 - 211
Target Start/End: Complemental strand, 52369906 - 52369783
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    |||||||||||| |||||||||||| || |||||||||||||| |||||||| || ||||| ||||| |||||||||| |||||||||||||||| | ||    
T  52369906 ctatgaagcacggacactcctcggaataggtgtgtcccggtgttggacacgcgtcggtgtccgataccgacaccgacacgacacctatgattacattgaa 52369807  T
Q  188 ttatgtcattttctcaaattatta 211  Q
    |||||| |||||||||||||||||    
T  52369806 ttatgtaattttctcaaattatta 52369783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 211
Target Start/End: Complemental strand, 25074915 - 25074797
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacactta 186  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |  ||||      | ||||||||||  || |||||||||||||| |    
T  25074915 gctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgcgttggtgt------cagacaccgacacaacgcctatgattacactca 25074822  T
Q  187 attatgtcattttctcaaattatta 211  Q
    |||||||||||||||||||||||||    
T  25074821 attatgtcattttctcaaattatta 25074797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 211
Target Start/End: Complemental strand, 21211413 - 21211296
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    ||||||||||| |||||||||||||||| | ||||||| ||||||||||||| || ||||| ||     ||||||||| |||||| || |||||||| ||    
T  21211413 ctatgaagcacaaacactcctcggattaggagtgtcccagtgtcggacacgcgtcggtgtc-ga-----acaccgacacgacacccataattacactgaa 21211320  T
Q  188 ttatgtcattttctcaaattatta 211  Q
     ||||| |||||||||||||||||    
T  21211319 ctatgtaattttctcaaattatta 21211296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 211
Target Start/End: Complemental strand, 8903555 - 8903440
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacactta 186  Q
    ||||||||||||||||||||||||||||| ||||||||||  |||||||||||||  ||||      | | || ||||| ||||||||| ||||||| ||    
T  8903555 gctatgaagcacgaacactcctcggattaggtgtgtcccg--gtcggacacgcataggtgt------ccggcatcgacacgacacctataattacac-ta 8903465  T
Q  187 attatgtcattttctcaaattatta 211  Q
    | ||||||||||||||||| |||||    
T  8903464 aatatgtcattttctcaaaatatta 8903440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 40052431 - 40052381
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  40052431 ctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacacg 40052381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 12704653 - 12704708
Alignment:
Q  156 gacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||| |||||||||||||||| | |||||||||||||| |||||||||||    
T  12704653 gacaccgacacgacacctatgattacattgaattatgtcattttttcaaattatta 12704708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 2408588 - 2408653
Alignment:
Q  86 ggctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctga 151  Q
    |||||||||||||| | ||||||  ||||| | |||||||||||||| ||||||||||||||||||    
T  2408588 ggctatgaagcacggagactccttagattaggcgtgtcccggtgtcgaacacgcatcagtgtctga 2408653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 3730167 - 3730216
Alignment:
Q  162 gacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||| |||||||||||||||||| |||||||||||| |||||||||||||    
T  3730167 gacacgacacctatgattacactgaattatgtcattatctcaaattatta 3730216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 34185052 - 34185101
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    |||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 34185101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 1830395 - 1830351
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||||||||||| |||||||||||||||| |||||||||    
T  1830395 gacacctatgattacactgaattatgtcattttcttaaattatta 1830351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 20691371 - 20691327
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||    
T  20691371 gacacatatgattacactgaattatgtcattttctcaaattatta 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 24204983 - 24205092
Alignment:
Q  90 atgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaatt 189  Q
    |||||||||| |||||||||| |||| | |||||| |||||||||||||| |||||||            |||||| ||||| ||| ||||||||  |||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgt------------ccgacacgacacttataattacactgtatt 24205070  T
Q  190 atgtcattttctcaaattatta 211  Q
    ||||||||||||||||||||||    
T  24205071 atgtcattttctcaaattatta 24205092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 25775624 - 25775576
Alignment:
Q  90 atgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||||||||||||||||| | |||||| |||||||||||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggacacg 25775576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 209
Target Start/End: Complemental strand, 8039338 - 8039216
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgaca-tgacacctatgattacactt 185  Q
    |||||||||||  ||||||||| |||||| ||||||||||| ||||||||||| |  || |  || ||||||| | |||  |||||||||||||||| |     
T  8039338 gctatgaagcataaacactccttggattaggtgtgtcccggagtcggacacgcgtttgtattcgacactgaca-caacaccgacacctatgattacattg 8039240  T
Q  186 aattatgtcattttctcaaattat 209  Q
    ||| ||| ||||||||||||||||    
T  8039239 aatcatgccattttctcaaattat 8039216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 15864892 - 15864841
Alignment:
Q  160 ccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||| |||||||||||||||||| |||||| ||||||| |||||||||||    
T  15864892 ccgacacgacacctatgattacactaaattatatcattttttcaaattatta 15864841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 25892523 - 25892468
Alignment:
Q  156 gacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| |||| |||||||||||||||||| |||||| ||||||||| |||||||||    
T  25892523 gacactgacacgacacctatgattacactgaattatatcattttcttaaattatta 25892468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 27505371 - 27505320
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||||||| ||||||||||||||| |  |||||||||||||||||||    
T  27505371 gctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacg 27505320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 55401195 - 55401144
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||||||| ||||||||||||||| | ||||| ||||||||||||||    
T  55401195 gctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacg 55401144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 49651716 - 49651762
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcgga 134  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  49651716 ctatgaagcacggacacttctcggattaggtgtgtcccggtgtcgga 49651762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 12100385 - 12100328
Alignment:
Q  91 tgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtc 148  Q
    |||||||||  ||||||||||| || ||||||||||||||||||||||| | ||||||    
T  12100385 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacgcgttagtgtc 12100328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 4704220 - 4704335
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgaca-tgacacctatgattacactta 186  Q
    |||||| |||| |||| ||||| |||||  |||||||  |||| |||||||| | |||||| || || ||||| |||| || ||| |||||||||||| |    
T  4704220 ctatgacgcacaaacattcctcagattagatgtgtcctagtgttggacacgcgttagtgtcagacaccgacac-gacaatggcacatatgattacactga 4704318  T
Q  187 attatgtcattttctca 203  Q
    |||||||||||||||||    
T  4704319 attatgtcattttctca 4704335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 4987222 - 4987270
Alignment:
Q  90 atgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||| ||| ||||||||||||||| | ||||||||||||||||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacg 4987270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 211
Target Start/End: Original strand, 8039764 - 8039886
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgaca-tgacacctatgattacactta 186  Q
    |||||||||||  | |||| |||||||||| |||||||||||||||||| |  ||| |||| || || |||| |||||  ||||| ||| |||||||| |    
T  8039764 ctatgaagcacagatactcttcggattaagcgtgtcccggtgtcggacatgtctca-tgtccgacaccgaca-cgacaccgacacatataattacactga 8039861  T
Q  187 attatgtcattttctcaaattatta 211  Q
    ||||| | |||||||||||||||||    
T  8039862 attatataattttctcaaattatta 8039886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 13799556 - 13799512
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||||    
T  13799556 gacacatattattacacttaattatgtcattttctcaaactatta 13799512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 20503584 - 20503536
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||||||| ||||||||||||||| | ||||||||||||| ||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagaca 20503536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 21149111 - 21149075
Alignment:
Q  175 tgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||| ||||||||||||||||||||||||||    
T  21149111 tgattacactgaattatgtcattttctcaaattatta 21149075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 34189479 - 34189435
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||| ||||||||| || |||||||||||||||||||||||    
T  34189479 gacacctacgattacactgaaatatgtcattttctcaaattatta 34189435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 40993275 - 40993323
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||||| | ||||||||||||||| | ||||||||||||||||||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggaca 40993323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 14223849 - 14223904
Alignment:
Q  156 gacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||| ||||| ||||| |||||| |||||| || ||||||||||||||||    
T  14223849 gacaccgacacgacacttatgaatacactaaattatatcgttttctcaaattatta 14223904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 17276847 - 17276796
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||||||| ||||| ||||||||| ||| ||| ||||||||||||||    
T  17276847 gctatgaagcacggacacttctcggattaggtgcgtctcggtgtcggacacg 17276796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 21367340 - 21367289
Alignment:
Q  156 gacaccgacatgacacctatgattacacttaattatgtcattttctcaaatt 207  Q
    ||||||||||  ||| | ||||||||||| ||||||||||||||||||||||    
T  21367340 gacaccgacacaacaaccatgattacactaaattatgtcattttctcaaatt 21367289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 25365521 - 25365470
Alignment:
Q  160 ccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||| ||||| |||||||||||  ||||||||||| ||||||||||||||    
T  25365521 ccgacacgacacttatgattacaccgaattatgtcatattctcaaattatta 25365470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 34307776 - 34307831
Alignment:
Q  156 gacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||| ||||| ||| |||||||| || ||||| |||||||||||||||||    
T  34307776 gacaccgacacgacacttataattacactgaaatatgtgattttctcaaattatta 34307831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 11610628 - 11610578
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| ||||||||| ||||| | |||||||| |||||||||||    
T  11610628 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggacacg 11610578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 16789584 - 16789634
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    ||||||||||| | |||||||| |||||| |||||||||| ||||||||||    
T  16789584 gctatgaagcatggacactcctaggattaggtgtgtcccgttgtcggacac 16789634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 18427068 - 18427018
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||| |||| ||||||||| ||||| ||||||||||||| ||||||||    
T  18427068 ctatgaaacacggacactcctcagattaggtgtgtcccggtgccggacacg 18427018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 25065037 - 25064987
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||| |||||||||||||||||||| ||  ||||||||||||| ||||||    
T  25065037 ctatggagcacgaacactcctcggataaaccgtgtcccggtgtcagacacg 25064987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 35223057 - 35223007
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| ||||||||||||| ||| ||||||| ||||| ||||||    
T  35223057 ctatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacg 35223007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 41961579 - 41961629
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| ||||| ||||||||| | ||||||| ||||||||||||    
T  41961579 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacg 41961629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 1389956 - 1389835
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaat 188  Q
    ||||||||||| |||||||| |||||| |  ||||| |||||||||||| |||  || ||| | || ||| || ||| ||||| ||||||| ||   |||    
T  1389956 tatgaagcacggacactccttggattaggcatgtcctggtgtcggacacacattggtatctaacaccgaccccaacacgacacgtatgattccatagaat 1389857  T
Q  189 tatgtcattttctcaaattatt 210  Q
    ||||| ||||| ||||||||||    
T  1389856 tatgtgattttatcaaattatt 1389835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 3730108 - 3730149
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtg 129  Q
    |||||||||| | ||||||||||||||| |||||||||||||    
T  3730108 ctatgaagcatggacactcctcggattaggtgtgtcccggtg 3730149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 14217021 - 14216972
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||||| ||||| ||||||||| ||||||||| |||||| |||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacg 14216972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 14223150 - 14223101
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||||| ||||| ||||||||| ||||||||| |||||| |||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacg 14223101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 15999951 - 16000000
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||| ||||| |||||||| |||||| | ||||||||||||||||||||    
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacg 16000000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 16789668 - 16789701
Alignment:
Q  178 ttacacttaattatgtcattttctcaaattatta 211  Q
    ||||||| ||||||||||||||||||||||||||    
T  16789668 ttacactgaattatgtcattttctcaaattatta 16789701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 49505160 - 49505205
Alignment:
Q  166 tgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||| ||| |||||||| |||||||| |||||||||||||||||    
T  49505160 tgacacatataattacactaaattatgtgattttctcaaattatta 49505205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 211
Target Start/End: Complemental strand, 9800170 - 9800048
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacat-gacacctatgattacactta 186  Q
    |||||||||||| | || |||| ||||| | |||||| |||||| |||||| |||| | |||||||| ||||| ||||  ||||| ||  |||||||  |    
T  9800170 ctatgaagcacggaaacgcctccgattaggcgtgtccaggtgtccgacacgtatca-tctctgataccgacac-gacaccgacacttacaattacacgga 9800073  T
Q  187 attatgtcattttctcaaattatta 211  Q
    ||||||| |||||||||||||||||    
T  9800072 attatgtaattttctcaaattatta 9800048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 21861694 - 21861658
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcc 124  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  21861694 ctatgaagcacggacactcctcggattaggtgtgtcc 21861658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 32804547 - 32804591
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| ||| |||||||| |||||||| |||||||||||||||||    
T  32804547 gacacatataattacactaaattatgtgattttctcaaattatta 32804591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 40150578 - 40150622
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| |||||||||| | |||||| |||||||||||||||||||    
T  40150578 gacacatatgattacattgaattatatcattttctcaaattatta 40150622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 8e-33; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 88 - 211
Target Start/End: Original strand, 31243476 - 31243599
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    ||||||| ||| ||||||||||  |||| |||||||| ||||||| ||||||||| ||||| || ||  |||||||||||||||||||||||||||| ||    
T  31243476 ctatgaaccacaaacactcctcatattaggtgtgtcctggtgtcgaacacgcatcggtgtccgacaccaacaccgacatgacacctatgattacactgaa 31243575  T
Q  188 ttatgtcattttctcaaattatta 211  Q
    ||||||||||||||||||||||||    
T  31243576 ttatgtcattttctcaaattatta 31243599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 92 - 211
Target Start/End: Original strand, 20743210 - 20743329
Alignment:
Q  92 gaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaattat 191  Q
    |||||||| |||||| ||||||||  ||||| |||||||||||||||  || |||||||| |  ||||||||||  ||||||||||||||||| ||||||    
T  20743210 gaagcacggacactcatcggattagatgtgttccggtgtcggacacgtgtcggtgtctgacatcgacaccgacacaacacctatgattacactgaattat 20743309  T
Q  192 gtcattttctcaaattatta 211  Q
    ||||||||||||||||||||    
T  20743310 gtcattttctcaaattatta 20743329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 101 - 211
Target Start/End: Complemental strand, 32910669 - 32910559
Alignment:
Q  101 acactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaattatgtcattttc 200  Q
    ||||||||||||||| | |||||  |||||||||||||| ||||||||  |||| || |||||||| ||||| || |||||||| |||||||||||||||    
T  32910669 acactcctcggattaggcgtgtcatggtgtcggacacgcgtcagtgtccaataccgataccgacataacacccataattacactgaattatgtcattttc 32910570  T
Q  201 tcaaattatta 211  Q
    |||||||||||    
T  32910569 tcaaattatta 32910559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 208
Target Start/End: Complemental strand, 17876285 - 17876166
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    |||||||||||  |||||||| |||||| |||||||| ||||||||||| || || |||||||| || ||||| |||| | ||| |||||||||||| ||    
T  17876285 ctatgaagcacagacactccttggattaggtgtgtcctggtgtcggacaagcgtcggtgtctgacac-gacactgacacggcacatatgattacactaaa 17876187  T
Q  188 ttatgtcattttctcaaatta 208  Q
    |||||||||||||| ||||||    
T  17876186 ttatgtcattttctaaaatta 17876166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 211
Target Start/End: Complemental strand, 24343632 - 24343515
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    |||||||||||| ||||||||| || || | ||||||||||||||||||||| || ||||| ||      |||||||| ||||||||| |||||||| ||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcgga------caccgacacgacacctataattacactgaa 24343539  T
Q  188 ttatgtcattttctcaaattatta 211  Q
    |||||| |||||||||||||||||    
T  24343538 ttatgtaattttctcaaattatta 24343515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 211
Target Start/End: Complemental strand, 7012198 - 7012074
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacat-gacacctatgattacactt 185  Q
    ||||||||||||| |||||||||| |||| ||||  |||||||||||| |||| || ||||| || || |||||  |||  || ||||||||| |||||     
T  7012198 gctatgaagcacggacactcctcgcattaggtgttccccggtgtcggatacgcgtcggtgtccgacaccgacaca-acaccgatacctatgatcacactg 7012100  T
Q  186 aattatgtcattttctcaaattatta 211  Q
    ||||||||||||||||||||||||||    
T  7012099 aattatgtcattttctcaaattatta 7012074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 211
Target Start/End: Original strand, 3144587 - 3144703
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    |||||||||||| ||||| ||||||||| ||||||| || ||| |||||||| |  ||||||||      |||||||| |||||||||||||||||| ||    
T  3144587 ctatgaagcacggacacttctcggattaggtgtgtctcg-tgttggacacgcgttggtgtctga------caccgacacgacacctatgattacactaaa 3144679  T
Q  188 ttatgtcattttctcaaattatta 211  Q
    |||| ||||||||| |||||||||    
T  3144680 ttatatcattttctgaaattatta 3144703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 53381530 - 53381590
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtc 148  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||| |||| ||||||||    
T  53381530 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtc 53381590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 211
Target Start/End: Original strand, 19230241 - 19230360
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    |||||||| ||| |||||| ||||||||  ||||||| | ||||| ||||||||| |||||||| || |||||    | ||||||||| |||||| | ||    
T  19230241 ctatgaagtacggacactcttcggattagatgtgtcctgttgtcgaacacgcatccgtgtctgacaccgacac----acgacacctataattacattgaa 19230336  T
Q  188 ttatgtcattttctcaaattatta 211  Q
    |||||| |||||||||||||||||    
T  19230337 ttatgttattttctcaaattatta 19230360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 19482798 - 19482748
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  19482798 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacg 19482748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 211
Target Start/End: Original strand, 39507059 - 39507170
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    ||||||||||  ||||||||||||| || ||||||| |||||||||||||| ||||||||            ||||||| ||||||||||||||||||||    
T  39507059 ctatgaagcagtaacactcctcggaataggtgtgtctcggtgtcggacacgtatcagtgt------------ccgacataacacctatgattacacttaa 39507146  T
Q  188 ttatgtcattttctcaaattatta 211  Q
    |||| ||||||||  |||||||||    
T  39507147 ttatatcattttcataaattatta 39507170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 211
Target Start/End: Original strand, 18513175 - 18513292
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    |||||||||||| ||||||||| ||||| | |||||| |||||||||||| | || ||||| || ||  ||||     |||||| |||||||||| | ||    
T  18513175 ctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacacacgtcggtgtccgacaca-acac-----tgacacatatgattacattgaa 18513268  T
Q  188 ttatgtcattttctcaaattatta 211  Q
    ||||||||||||||||||||||||    
T  18513269 ttatgtcattttctcaaattatta 18513292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 23292926 - 23292976
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| ||||||||||||||| | ||||||||||||||||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacg 23292976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 3947702 - 3947751
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||||| ||||||||||||||| |||||||| |||||||||||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacg 3947751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 10133828 - 10133755
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacacc 161  Q
    |||||||||| ||||  ||||| ||||| |||||||| |||||||||||||| ||||||||||| || ||||||    
T  10133828 ctatgaagcatgaacgttcctcagattaggtgtgtcctggtgtcggacacgcgtcagtgtctgacaccgacacc 10133755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 29205587 - 29205539
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||||||||||||||||||||||| | ||||||| ||||||||||    
T  29205587 ctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggaca 29205539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 944617 - 944717
Alignment:
Q  103 actcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaattatgtcattttctc 202  Q
    ||||||| ||||| ||||||||||||||||||||||| || ||||  || ||||||||      ||||||||| |||||||| ||||  |||||| ||||    
T  944617 actcctcagattaggtgtgtcccggtgtcggacacgcgtctgtgttcgacactgacac------gacacctataattacactaaattgcgtcattatctc 944710  T
Q  203 aaattat 209  Q
    |||||||    
T  944711 aaattat 944717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 210
Target Start/End: Complemental strand, 6274036 - 6273953
Alignment:
Q  127 gtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatt 210  Q
    |||||||||| || ||  ||||||| || |||||||||| |||  |||| |||||||| |||||| ||||||||||||||||||    
T  6274036 gtgtcggacatgcgtcgatgtctgacaccgacaccgacacgacgactataattacactaaattatatcattttctcaaattatt 6273953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 12895213 - 12895260
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcgga 134  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||||    
T  12895213 gctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcgga 12895260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 199
Target Start/End: Complemental strand, 23386209 - 23386166
Alignment:
Q  156 gacaccgacatgacacctatgattacacttaattatgtcatttt 199  Q
    ||||||||||||||||||||||||||||| |||||| |||||||    
T  23386209 gacaccgacatgacacctatgattacactaaattatatcatttt 23386166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 30982808 - 30982929
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgaca-tgacacctatgattacacttaa 187  Q
    ||||||||||| |||||| | |||||| | ||||||||||||||||||||  || |||||||| || |||| |||||  ||||| ||| |||||||| ||    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtc-gtgtctgacaccgaca-cgacaccgacacttataattacactgaa 30982905  T
Q  188 ttatgtcattttctcaaattatta 211  Q
     ||||| |||||||||||| ||||    
T  30982906 atatgtgattttctcaaatcatta 30982929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 40784072 - 40784029
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtc 131  Q
    |||||||||||| ||||||||||||||| |||||||||||||||    
T  40784072 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtc 40784029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 16184950 - 16184896
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatc 142  Q
    ||||||||||| |||||||||||||||| | ||||||| |||||||||| |||||    
T  16184950 ctatgaagcacaaacactcctcggattaggcgtgtcccagtgtcggacaggcatc 16184896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 22234819 - 22234869
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||||||||| |||||||||  ||||||| |||||||||||||    
T  22234819 ctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacg 22234869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 715545 - 715593
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||||||| ||||||||||||||| | ||||||| ||||||||||    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 715593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 752871 - 752919
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||||||| ||||||||||||||| | ||||||| ||||||||||    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 752919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 5775365 - 5775409
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||||    
T  5775365 gacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 211
Target Start/End: Complemental strand, 11931410 - 11931288
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacat-gacacctatgattacactta 186  Q
    |||||||||||| |||||||  |||||| |||||||| ||||||||||| || || ||||| ||||| ||||  ||||| ||||| |||  ||||||| |    
T  11931410 ctatgaagcacggacactccatggattaggtgtgtcctggtgtcggacatgcgtcggtgtc-gataccgaca-tgacatcgacacatatatttacactaa 11931313  T
Q  187 attatgtcattttctcaaattatta 211  Q
    ||||||| ||||| ||| |||||||    
T  11931312 attatgtgattttttcatattatta 11931288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 34515877 - 34515925
Alignment:
Q  163 acatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||||||| ||||||| ||||||||||||||||  ||||||||    
T  34515877 acatgacacctatgtttacactgaattatgtcattttcttgaattatta 34515925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 49659533 - 49659573
Alignment:
Q  170 acctatgattacacttaattatgtcattttctcaaattatt 210  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  49659533 acctatgattacactaaattatatcattttctcaaattatt 49659573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 5654599 - 5654642
Alignment:
Q  168 acacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||| |||||||||| | ||||||||||||||||||||||||||    
T  5654599 acacgtatgattacattgaattatgtcattttctcaaattatta 5654642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 28084640 - 28084593
Alignment:
Q  91 tgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||| ||||||||||||||| | ||||||| ||||||||||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacg 28084593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 47191001 - 47191044
Alignment:
Q  168 acacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||    
T  47191001 acacctaggattacactaaattatgtcattttcgcaaattatta 47191044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 2976739 - 2976701
Alignment:
Q  174 atgattacacttaattatgtcattttctcaaattattac 212  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  2976739 atgattacattcaattatgtcattttctcaaattattac 2976701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 10546194 - 10546156
Alignment:
Q  173 tatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  10546194 tatgattacattgaattatgtcattttctcaaattatta 10546156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 34306744 - 34306794
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||||||| ||||| ||||| | ||||| ||||||||||||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacg 34306794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 35161155 - 35161105
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| |||||  |||||||| |||||| |||||||||||||||    
T  35161155 ctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacg 35161105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 46180944 - 46180986
Alignment:
Q  168 acacctatgattacacttaattatgtcattttctcaaattatt 210  Q
    |||| |||||||||||| |||||||| ||||||||||||||||    
T  46180944 acacatatgattacactgaattatgttattttctcaaattatt 46180986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 8457969 - 8457932
Alignment:
Q  175 tgattacacttaattatgtcattttctcaaattattac 212  Q
    |||||||| | |||||||||||||||||||||||||||    
T  8457969 tgattacattcaattatgtcattttctcaaattattac 8457932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 46715416 - 46715473
Alignment:
Q  91 tgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtc 148  Q
    |||||||||||||||||||||||||    ||| ||||||||||||||||  |||||||    
T  46715416 tgaagcacgaacactcctcggattagacatgtgccggtgtcggacacgcggcagtgtc 46715473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 941365 - 941313
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgc 139  Q
    ||||||||||||| ||| || |||||||| |||||||| | ||||||||||||    
T  941365 gctatgaagcacggacagtcttcggattaggtgtgtcctgatgtcggacacgc 941313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 11596297 - 11596345
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||||||| ||||||||| ||||| | |||||||| |||||||||    
T  11596297 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggaca 11596345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 14465301 - 14465345
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| |||||||| | | ||||||||||||||||||||||||||    
T  14465301 gacacatatgattaaattgaattatgtcattttctcaaattatta 14465345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 22440559 - 22440607
Alignment:
Q  90 atgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||| ||||||||||||||| | ||||||  ||||||||||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggacacg 22440607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 30520444 - 30520488
Alignment:
Q  168 acacctatgattacacttaattatgtca-ttttctcaaattatta 211  Q
    ||||||||||||||||| |||||||||| |||| |||||||||||    
T  30520444 acacctatgattacactgaattatgtcatttttttcaaattatta 30520488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 33950188 - 33950144
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| |||||||||| | |||||||| |||||||||||||||||    
T  33950188 gacacatatgattacattaaattatgtgattttctcaaattatta 33950144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 35157925 - 35157973
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||||||| ||||| ||||||||||| |||| ||||||| |||||    
T  35157925 ctatgaagcacggacacttctcggattaagcgtgttccggtgttggaca 35157973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 40699887 - 40699935
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    ||||||||||| ||||||||| ||||||  ||||||| |||||||||||    
T  40699887 ctatgaagcacaaacactcctgggattacatgtgtcctggtgtcggaca 40699935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 53968606 - 53968554
Alignment:
Q  159 accgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||| |||| |||||||  |||| |||||||||||||||| |||||||||    
T  53968606 accgacacgacatctatgatatcactgaattatgtcattttcttaaattatta 53968554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 8e-30; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 88 - 209
Target Start/End: Original strand, 11307934 - 11308053
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    |||||||||||| |||||||||||||||||||| ||  |||||||||||||| || |||||  | || |||||||||| |||||||||||||||||| ||    
T  11307934 ctatgaagcacggacactcctcggattaagtgtttc--ggtgtcggacacgcgtcggtgtccaacaccgacaccgacacgacacctatgattacactgaa 11308031  T
Q  188 ttatgtcattttctcaaattat 209  Q
    |||||||||||| |||||||||    
T  11308032 ttatgtcattttttcaaattat 11308053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 211
Target Start/End: Original strand, 10535685 - 10535810
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactga--caccgacatgacacctatgattacactt 185  Q
    |||||||||||||||||||||||||||| | |||||| |||||| ||||| ||| |||||| || ||||   |||| ||| ||||| ||||||||||||     
T  10535685 ctatgaagcacgaacactcctcggattaggcgtgtcctggtgtcagacacacattagtgtcggacactgtgtcaccaacacgacacttatgattacactg 10535784  T
Q  186 aattatgtcattttctcaaattatta 211  Q
    ||||||||||||||||||||||||||    
T  10535785 aattatgtcattttctcaaattatta 10535810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 25544556 - 25544489
Alignment:
Q  144 gtgtctgatactgacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||| ||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||    
T  25544556 gtgtctgacactgacaccgacacgacacctatgattacactgaattatatcattttctcaaattatta 25544489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 23354582 - 23354703
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaat 188  Q
    |||||| |||| ||||||||||||||| | |||||||| |||| |||||   || ||||| ||  | |||||||||| |||||||||||||||||| |||    
T  23354582 tatgaaccacggacactcctcggattaggcgtgtcccg-tgtcagacaccggtcggtgtccgaccccgacaccgacacgacacctatgattacactaaat 23354680  T
Q  189 tatgtcattttctcaaattatta 211  Q
    ||| |||||||||||||||||||    
T  23354681 tatatcattttctcaaattatta 23354703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 23354926 - 23355046
Alignment:
Q  90 atgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaatt 189  Q
    |||||||| | ||||||||||||||| | |||||||| |||| ||||||  || |||||  |  | |||||||||||||||||||||||| |||| ||||    
T  23354926 atgaagcaaggacactcctcggattaggcgtgtcccg-tgtcagacacgggtcggtgtccaaccccgacaccgacatgacacctatgattgcactaaatt 23355024  T
Q  190 atgtcattttctcaaattatta 211  Q
    || |||||||||||||||||||    
T  23355025 atatcattttctcaaattatta 23355046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 211
Target Start/End: Complemental strand, 24011148 - 24011044
Alignment:
Q  101 acactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaattatgtcattttc 200  Q
    |||||| |||||||| |||||||  ||||||||||||||||| || || ||      |||||||  |||||||||||||||||| |||||||||||||||    
T  24011148 acactcttcggattatgtgtgtcttggtgtcggacacgcatccgtatcaga------caccgacgcgacacctatgattacactaaattatgtcattttc 24011055  T
Q  201 tcaaattatta 211  Q
    |||||||||||    
T  24011054 tcaaattatta 24011044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 211
Target Start/End: Complemental strand, 30563540 - 30563417
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    ||||||||||| |  |||||| |||||| |  ||||| ||||||||| |||| |  ||||| || |||||||||||||  ||||||||  ||||| | ||    
T  30563540 ctatgaagcacaagtactccttggattagggttgtcctggtgtcggatacgcctgggtgtccgacactgacaccgacacaacacctatagttacattgaa 30563441  T
Q  188 ttatgtcattttctcaaattatta 211  Q
    ||||||||||||||||||||||||    
T  30563440 ttatgtcattttctcaaattatta 30563417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 211
Target Start/End: Complemental strand, 38919336 - 38919214
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    ||||||||||| ||||||| || |||||   |||||| | |||||||||||||||||| || || || |||||  ||| |||||||||||||||||| ||    
T  38919336 ctatgaagcacaaacactcttcagattagacgtgtcctg-tgtcggacacgcatcagtatccgacaccgacactaacacgacacctatgattacactaaa 38919238  T
Q  188 ttatgtcattttctcaaattatta 211  Q
     |||  ||||||||||||||||||    
T  38919237 ctataacattttctcaaattatta 38919214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 37419873 - 37419819
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatc 142  Q
    |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||    
T  37419873 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatc 37419819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 18622721 - 18622673
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||    
T  18622721 ctatgaagcacggacactcctcggattaagtgtgtcccggtgtaggaca 18622673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 18840953 - 18841001
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  18840953 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggaca 18841001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 37559096 - 37559046
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| ||||||||||||||||| |||| |||||||||||||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacg 37559046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 34006998 - 34007042
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||||||||||| |||||||||| |||||||||||||||    
T  34006998 gacacctatgattacactgaattatgtcaatttctcaaattatta 34007042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 12748735 - 12748692
Alignment:
Q  168 acacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||||||||||| || |||||||||||||||||||||||    
T  12748735 acacctatgattacactgaactatgtcattttctcaaattatta 12748692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 2438661 - 2438707
Alignment:
Q  90 atgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||||| ||||||||||||||| | ||||||||||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggaca 2438707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 26769641 - 26769591
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| ||||||||||||||| | ||||||| ||||||||||||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacg 26769591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 38117099 - 38117149
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| |||| |||||||||| | ||||||||||||||||||||    
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacg 38117149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 18571025 - 18570980
Alignment:
Q  166 tgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||    
T  18571025 tgacacatatgattacattgaattatgtcattttctcaaattatta 18570980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 44860449 - 44860401
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    ||||||||||| |||||||||| |||| |||||||||| ||||||||||    
T  44860449 tatgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacac 44860401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 42511321 - 42511372
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||||||| |||||||||||||||   ||||||| ||||||||||||    
T  42511321 gctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacg 42511372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 8300226 - 8300264
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaa 205  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  8300226 gacacttatgattacactaaattatgtcattttctcaaa 8300264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 15972992 - 15972942
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| ||| || |||||||| ||||||||||| ||||||||||    
T  15972992 ctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacg 15972942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 36281731 - 36281693
Alignment:
Q  173 tatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  36281731 tatgattacactaaattatgtgattttctcaaattatta 36281693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 41843565 - 41843515
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||  ||||||||||||| ||| ||||||| ||||||||||||    
T  41843565 ctatgaagcacagacactcctcggataaagcgtgtccccgtgtcggacacg 41843515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 15909570 - 15909619
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    ||||||||||||||||||| ||| |||| | ||||||| |||||||||||    
T  15909570 ctatgaagcacgaacactcttcgaattaggcgtgtccctgtgtcggacac 15909619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 19980795 - 19980746
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    ||||||||||| ||||||| ||||||||| ||||||| || |||||||||    
T  19980795 gctatgaagcatgaacacttctcggattaggtgtgtctcgatgtcggaca 19980746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 22085049 - 22085012
Alignment:
Q  174 atgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  22085049 atgattacactaaattatgtcattttcttaaattatta 22085012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 27286298 - 27286343
Alignment:
Q  166 tgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||| ||||||||||||||||| || || |||||||||||    
T  27286298 tgacacctataattacacttaattatgtgatcttatcaaattatta 27286343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 28596587 - 28596538
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||||| ||||||||||||||| | ||||||  ||||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacg 28596538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 34993922 - 34993971
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    ||||||||||||||||||||| | |||| | ||||||| |||||||||||    
T  34993922 ctatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacac 34993971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 4229415 - 4229459
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| |||||||||||| |||||||||||| ||| |||||||||    
T  4229415 gacacatatgattacactgaattatgtcattctcttaaattatta 4229459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 11223793 - 11223841
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||||||| ||||||||| ||||| | ||||||||||||| ||||    
T  11223793 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca 11223841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 12668430 - 12668474
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| ||| |||||||| |||||||||||||| |||||||||||    
T  12668430 gacacttataattacactgaattatgtcattttttcaaattatta 12668474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 18889598 - 18889642
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| |||||||||||| |||||||| |||||||||| ||||||    
T  18889598 gacacatatgattacactgaattatgtgattttctcaatttatta 18889642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 30394518 - 30394474
Alignment:
Q  158 caccgacatgacacctatgattacacttaattatgtcattttctc 202  Q
    |||| ||| |||||||||||||| ||| |||||||||||||||||    
T  30394518 caccaacaggacacctatgattatactgaattatgtcattttctc 30394474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 90 - 211
Target Start/End: Complemental strand, 44067644 - 44067524
Alignment:
Q  90 atgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaatt 189  Q
    |||||||||| |||||||||| |||| | |||||| ||||||||||||||||||||||| || || |||||||||| ||||| ||| ||||||||  |||    
T  44067644 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcatcagtgtccgacac-gacaccgacacgacacttataattacactgtatt 44067546  T
Q  190 atgtcattttctcaaattatta 211  Q
    ||||||||||||||||||||||    
T  44067545 atgtcattttctcaaattatta 44067524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 13009423 - 13009544
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaat 188  Q
    ||||||||||| || ||||| |||||| | |||||||| ||||||||| || || |||||||| ||  ||||||||| ||||| |||||||||||| |||    
T  13009423 tatgaagcacggacgctccttggattaggcgtgtcccg-tgtcggacaggcgtcggtgtctgacacctacaccgacacgacacttatgattacactaaat 13009521  T
Q  189 tatgtcattttctcaaattatta 211  Q
    ||| |  ||||||||||||||||    
T  13009522 tatattgttttctcaaattatta 13009544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 88 - 211
Target Start/End: Complemental strand, 40064081 - 40063959
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtc-tgatactgacaccgacatgacacctatgattacactta 186  Q
    ||||| |||||| |||||||||||||||  |||||||||||||||||||| | || | | | || |   |||||||||| ||| |||||||||||| | |    
T  40064081 ctatgtagcacggacactcctcggattagatgtgtcccggtgtcggacacacgtcggcgacgtgttg--gacaccgacacgacgcctatgattacaatga 40063984  T
Q  187 attatgtcattttctcaaattatta 211  Q
    |||||||||||||||||||||||||    
T  40063983 attatgtcattttctcaaattatta 40063959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 13845322 - 13845242
Alignment:
Q  131 cggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||| |||||||| || || ||||| |||| ||||||||||||||| || |||||| |||||||||||||||||||    
T  13845322 cggacacgcgtcagtgtccgacaccgacacagacacgacacctatgattactctaaattatatcattttctcaaattatta 13845242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 29510233 - 29510284
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgc 139  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  29510233 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgc 29510284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 35431140 - 35431191
Alignment:
Q  160 ccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||| |||||||||||||||||| || |||||||||||||||||||||||    
T  35431140 ccgacacgacacctatgattacactaaaatatgtcattttctcaaattatta 35431191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 211
Target Start/End: Complemental strand, 39820548 - 39820437
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacactta 186  Q
    ||||||||||||| ||||| ||||||||| | ||||||| ||||||||||||| || ||||            |||||| |||||||||||||||||| |    
T  39820548 gctatgaagcacggacacttctcggattaggcgtgtccc-gtgtcggacacgcgtcggtgt------------ccgacacgacacctatgattacactaa 39820462  T
Q  187 attatgtcattttctcaaattatta 211  Q
    ||||| |||||||||||||||||||    
T  39820461 attatatcattttctcaaattatta 39820437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 28883880 - 28883929
Alignment:
Q  162 gacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||| ||||||||||||| |||| ||||||||||||||||||||||||||    
T  28883880 gacaagacacctatgattccactgaattatgtcattttctcaaattatta 28883929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 38487157 - 38487217
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtc 148  Q
    |||||||||||  ||||||||||||||| |||||||| |||||||||||||| || |||||    
T  38487157 ctatgaagcacagacactcctcggattatgtgtgtccgggtgtcggacacgcgtcggtgtc 38487217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 1676771 - 1676720
Alignment:
Q  160 ccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||| |||||||||||||||||| || |||||||||||| ||||||||||    
T  1676771 ccgacacgacacctatgattacactaaaatatgtcattttcacaaattatta 1676720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 22652107 - 22652057
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    ||||||||||||| |||||||||||||||   |||||||||||||||||||    
T  22652107 gctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacac 22652057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 3025604 - 3025559
Alignment:
Q  166 tgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||| |||||||| |||||||| |||||||||||||||||    
T  3025604 tgacacctataattacactgaattatgtgattttctcaaattatta 3025559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 30067968 - 30068017
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    |||||||||||| |||||| |||||||| ||||||||| |||||||||||    
T  30067968 ctatgaagcacggacactcatcggattaggtgtgtcccagtgtcggacac 30068017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 926730 - 926778
Alignment:
Q  90 atgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||| ||||||||||||| |||  |||||||||||||||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacg 926778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 18130504 - 18130583
Alignment:
Q  131 cggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||  || |||||||||||||  ||| ||||||||||| || |||||||||||| | |||||||||||| ||||||    
T  18130504 cggacacgtgtcggtgtctgatactgt-accaacatgacacctctggttacacttaattgtatcattttctcaacttatta 18130583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 36450693 - 36450745
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgc 139  Q
    ||||||||||||  ||||||||||||||| | |||||| ||||||||||||||    
T  36450693 gctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgc 36450745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 15816057 - 15816104
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcgga 134  Q
    ||||||||||||| ||||| ||||||||| | ||||||||||||||||    
T  15816057 gctatgaagcacggacacttctcggattaggcgtgtcccggtgtcgga 15816104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 209
Target Start/End: Complemental strand, 22850401 - 22850354
Alignment:
Q  162 gacatgacacctatgattacacttaattatgtcattttctcaaattat 209  Q
    ||||||| |||||| |||||| ||||||||||| ||||||||||||||    
T  22850401 gacatgaaacctataattacatttaattatgtctttttctcaaattat 22850354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 29198492 - 29198531
Alignment:
Q  173 tatgattacacttaattatgtcattttctcaaattattac 212  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  29198492 tatgattacattgaattatgtcattttctcaaattattac 29198531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 2035866 - 2035816
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgc 139  Q
    ||||||||||| || || ||||||||| |||| ||||||||||||||||||    
T  2035866 tatgaagcacggacgctactcggattaggtgtctcccggtgtcggacacgc 2035816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 8017548 - 8017494
Alignment:
Q  157 acaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||| |||| |||| ||||||||||||| |||||||||||||| ||| |||||||    
T  8017548 acactgacacgacatctatgattacactcaattatgtcattttttcatattatta 8017494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 8343446 - 8343396
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||  |||||| |||||||| | ||||||||||||||||||||    
T  8343446 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacg 8343396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 134
Target Start/End: Complemental strand, 11944795 - 11944749
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcgga 134  Q
    ||||||||||||||||||| |||||||| | ||||| ||||||||||    
T  11944795 ctatgaagcacgaacactcatcggattaggcgtgtctcggtgtcgga 11944749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 12559119 - 12559157
Alignment:
Q  173 tatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  12559119 tatgattacactgaattatatcattttctcaaattatta 12559157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 211
Target Start/End: Original strand, 14513130 - 14513225
Alignment:
Q  110 ggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaattatgtcattttctcaaattat 209  Q
    |||||| |||||| ||||||||||||| || || ||||||||      ||||||||  | | |||||||||| || |||||||| |||||||||||||||    
T  14513130 ggattaggtgtgttccggtgtcggacatgcgtcggtgtctga------caccgacaccaaatctatgattacgctgaattatgtaattttctcaaattat 14513223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 16641909 - 16641951
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgt 130  Q
    |||||||||||  ||||||||||||||| ||||||||||||||    
T  16641909 ctatgaagcacagacactcctcggattaggtgtgtcccggtgt 16641951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 26609758 - 26609812
Alignment:
Q  153 actgacaccgacatgacacctatgattacacttaattatgtcattttctcaaatt 207  Q
    ||||||||||||||| ||||||| |||||||| | |||| ||||||| |||||||    
T  26609758 actgacaccgacatgtcacctataattacactgagttatatcattttttcaaatt 26609812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 30068037 - 30068079
Alignment:
Q  169 cacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||| ||||| ||| ||||||||||||||||||||||||||    
T  30068037 cacctacgattatactgaattatgtcattttctcaaattatta 30068079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 8343086 - 8343037
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    |||||||||||  |||||| |||||||| | |||||||||||||||||||    
T  8343086 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacac 8343037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 9402115 - 9402046
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactga 157  Q
    ||||||| ||||||||||||||| |||| || |||   ||||||||| ||||||||| |||||| |||||    
T  9402115 ctatgaaacacgaacactcctcgaattatgtatgtttaggtgtcggatacgcatcagcgtctgacactga 9402046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 14659639 - 14659708
Alignment:
Q  92 gaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacacc 161  Q
    ||||||||||| |||||| ||||| ||||||| |||||| |||||||| |  |||||||| || ||||||    
T  14659639 gaagcacgaactctcctcagattaggtgtgtctcggtgttggacacgcgttggtgtctgacaccgacacc 14659708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 17751775 - 17751730
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcgg 133  Q
    ||||||||| || ||||||||||||||| | |||||||||||||||    
T  17751775 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtcgg 17751730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 17760762 - 17760717
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcgg 133  Q
    ||||||||| || ||||||||||||||| | |||||||||||||||    
T  17760762 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtcgg 17760717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 22943302 - 22943339
Alignment:
Q  101 acactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  22943302 acactcctcggattaggcgtgtcccggtgtcggacacg 22943339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 24413498 - 24413570
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacac 160  Q
    ||||||||||||| ||||| |||||||||   |||||||| ||| ||||||||||| ||||| || ||||||||    
T  24413498 gctatgaagcacggacacttctcggattagacgtgtcccgctgttggacacgcatc-gtgtccgacactgacac 24413570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 26915236 - 26915285
Alignment:
Q  156 gacaccgacatgacacctatgattacacttaattatgtcattttctcaaa 205  Q
    |||||||||| ||||| | |||||||| | ||||||||||||||||||||    
T  26915236 gacaccgacacgacacttgtgattacattaaattatgtcattttctcaaa 26915285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 3454626 - 3454578
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    ||||||||||| |||||| |||||||||| |||||  ||||||||||||    
T  3454626 ctatgaagcacaaacacttctcggattaaatgtgtttcggtgtcggaca 3454578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 13403225 - 13403177
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||||||| |||||||| | |||||| ||||| ||||||||||||    
T  13403225 ctatgaagcacggacactccttgaattaagcgtgtctcggtgtcggaca 13403177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 13844603 - 13844647
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| ||| |||||||| |||||||| |||||||||||||||||    
T  13844603 gacacatataattacactcaattatgtgattttctcaaattatta 13844647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 16988030 - 16987990
Alignment:
Q  90 atgaagcacgaacactcctcggattaagtgtgtcccggtgt 130  Q
    |||||||||| ||||||||||||||| | ||||||||||||    
T  16988030 atgaagcacggacactcctcggattaggggtgtcccggtgt 16987990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 28810335 - 28810371
Alignment:
Q  176 gattacacttaattatgtcattttctcaaattattac 212  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  28810335 gattacatttaattatgtcattttctcacattattac 28810371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 34127171 - 34127215
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtc 131  Q
    ||||||||||||| |||||||| |||||| |||||||| ||||||    
T  34127171 gctatgaagcacggacactccttggattaggtgtgtccaggtgtc 34127215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 34897137 - 34897093
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| ||| |||||||| |||||||| |||||||||||||||||    
T  34897137 gacacatataattacactgaattatgtgattttctcaaattatta 34897093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 211
Target Start/End: Complemental strand, 43250118 - 43250001
Alignment:
Q  93 aagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaattatg 192  Q
    ||||||| |||||||||| |||| | |||||| |||||||||||||| |||||||| ||  | |||||||||| ||||| ||| ||||||||  ||||||    
T  43250118 aagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgacgc-gacaccgacacgacacttataattacactgtattatg 43250020  T
Q  193 tcattttctcaaattatta 211  Q
    |||||||||||||||||||    
T  43250019 tcattttctcaaattatta 43250001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 209
Target Start/End: Original strand, 7133212 - 7133327
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    |||||||||||| || |||||| ||||| ||||||||| ||||||||||||| || ||||| ||      ||||||||   |||||||||||||||| ||    
T  7133212 ctatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacacgcgtcggtgtccga------caccgacacaccacctatgattacactgaa 7133305  T
Q  188 ttatgtcattttctcaaattat 209  Q
    ||||||||||||||||||||||    
T  7133306 ttatgtcattttctcaaattat 7133327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 29812660 - 29812715
Alignment:
Q  156 gacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||| |||||||||||||||||| |||||| |||||||||||||||||||    
T  29812660 gacaccgacacgacacctatgattacactaaattatatcattttctcaaattatta 29812715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 5938582 - 5938480
Alignment:
Q  103 actcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaattatgtcattttctc 202  Q
    ||||||| ||||| |||||| ||||||||||||||||||| ||||      ||||||||||||  |||||||| |||| ||| |||||||| ||||| ||    
T  5938582 actcctcagattaggtgtgttccggtgtcggacacgcatcggtgt------ctgacaccgacacaacacctataattatactgaattatgttattttatc 5938489  T
Q  203 aaattatta 211  Q
    |||||||||    
T  5938488 aaattatta 5938480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 6490835 - 6490786
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  6490835 ctatgaagcacggacactcctcggattaagcgtgtcccggtgtcggacac 6490786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 208
Target Start/End: Complemental strand, 23930351 - 23930230
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtg------tcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgatta 180  Q
    ||||||||||||| ||||||| ||||||| ||||       ||||||||||||||||||||| || || ||      ||||||||  |||||||||||||    
T  23930351 gctatgaagcacggacactccacggattaggtgtaggtgtatcccggtgtcggacacgcatcggtatccga------caccgacacaacacctatgatta 23930258  T
Q  181 cacttaattatgtcattttctcaaatta 208  Q
    |||| |||||||||||||||||||||||    
T  23930257 cactgaattatgtcattttctcaaatta 23930230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 32287404 - 32287452
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 32287452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 14729823 - 14729772
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  14729823 gctatgaagtacggacactcctcggattaagcgtgtcccggtgtcggacacg 14729772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 5409771 - 5409821
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| ||||||||||||||| | ||||||||||||||||||||    
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacg 5409821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 598329 - 598277
Alignment:
Q  86 ggctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||||| ||||| ||||||||| | ||||||||||||||||||||    
T  598329 ggctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacg 598277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 211
Target Start/End: Original strand, 38804489 - 38804606
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    |||||||||||  ||||||||||||||| |  |||||||| ||||||||| | || ||||| ||      |||| ||| ||||||||||||||| ||  |    
T  38804489 ctatgaagcacatacactcctcggattaggcatgtcccggcgtcggacacacgtcggtgtccga------caccaacacgacacctatgattaccctgga 38804582  T
Q  188 ttatgtcattttctcaaattatta 211  Q
    |||||||||||||| |||||||||    
T  38804583 ttatgtcattttctgaaattatta 38804606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 43027402 - 43027454
Alignment:
Q  86 ggctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||||| |||||| |||||||| | ||||||||||||||||||||    
T  43027402 ggctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacg 43027454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 23751959 - 23751908
Alignment:
Q  160 ccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||| |||||||||||||||||| |||||| ||||||| |||||||||||    
T  23751959 ccgacacgacacctatgattacactaaattatatcattttatcaaattatta 23751908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 32093954 - 32094005
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgt-cccggtgtcggacacg 138  Q
    |||||||||||||||||||||||||||| | |||| ||||||||||||||||    
T  32093954 ctatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacg 32094005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 32308249 - 32308128
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgaca-tgacacctatgattacacttaa 187  Q
    ||||||||| |||||||||||||||||  |||||| |||||||||||| |  || |||||  | || |||| ||||| |||||| ||  |||||||| ||    
T  32308249 tatgaagcatgaacactcctcggattagctgtgtctcggtgtcggacatgtgtc-gtgtccaacaccgaca-cgacactgacacatacaattacactgaa 32308152  T
Q  188 ttatgtcattttctcaaattatta 211  Q
    |||||| |||||||||||||||||    
T  32308151 ttatgtgattttctcaaattatta 32308128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 9778624 - 9778574
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| |||||||| |||||| | ||||||||||||||||||||    
T  9778624 ctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacg 9778574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 17852119 - 17852069
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| |||||||||| |||| ||||||| ||||||||||||||    
T  17852119 ctatgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacacg 17852069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 24105798 - 24105748
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    |||||||||||| |||||||||||| ||| | |||||||||||||||||||    
T  24105798 gctatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggacac 24105748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 18233605 - 18233646
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaatta 208  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  18233605 gacacctataattacactgaattatgtcattttctcaaatta 18233646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 22868164 - 22868116
Alignment:
Q  90 atgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||| | ||||||||||||||| ||||||||||||||| ||||||    
T  22868164 atgaagcatggacactcctcggattatgtgtgtcccggtgtctgacacg 22868116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 211
Target Start/End: Complemental strand, 24339772 - 24339650
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgaca-tgacacctatgattacactta 186  Q
    ||||||||||||  |||||||||||||| | |||||||||||||||| |||  || ||||| || || |||| |||||  ||||| | | |||||||| |    
T  24339772 ctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtc-gtgtccgacaccgaca-cgacaccgacacttgtaattacactga 24339675  T
Q  187 attatgtcattttctcaaattatta 211  Q
    ||||||| ||||| |||||||||||    
T  24339674 attatgtgattttttcaaattatta 24339650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 38134413 - 38134457
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| |||||||||| | ||||||||||||||||||||||||||    
T  38134413 gacacatatgattacattgaattatgtcattttctcaaattatta 38134457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 2533761 - 2533804
Alignment:
Q  91 tgaagcacgaacactcctcggattaagtgtgtcccggtgtcgga 134  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||    
T  2533761 tgaagcacgaacactcctcggattacgcgtgtcccggcgtcgga 2533804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 4017790 - 4017845
Alignment:
Q  156 gacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||| ||| ||||| |||||||||||| |||||| || ||||||||||||||||    
T  4017790 gacaccaacacgacacttatgattacactaaattatatcgttttctcaaattatta 4017845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 12278894 - 12278843
Alignment:
Q  160 ccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||| ||||| ||| |||||||| |||||||||||||||| |||||||||    
T  12278894 ccgacacgacacatataattacactgaattatgtcattttcttaaattatta 12278843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 17780080 - 17780135
Alignment:
Q  156 gacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||| ||||||||| ||||||   |||||||||||||||| |||||||||    
T  17780080 gacaccgacacgacacctattattacatagaattatgtcattttcttaaattatta 17780135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 21138931 - 21138986
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatca 143  Q
    ||||||||||||||||||||   ||||||| |||||| ||||||||||||| ||||    
T  21138931 ctatgaagcacgaacactcccttgattaagcgtgtcctggtgtcggacacgtatca 21138986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 29763128 - 29763179
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||||||| ||||||||||||||| | |||||| | |||||||||||    
T  29763128 gctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacg 29763179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 1433579 - 1433529
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    ||||||||||||| |||||||||||||||   |||||| ||||||||||||    
T  1433579 gctatgaagcacggacactcctcggattagacgtgtcctggtgtcggacac 1433529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 211
Target Start/End: Complemental strand, 16341538 - 16341504
Alignment:
Q  177 attacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||||||||||| |||||||||||||||||    
T  16341538 attacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 26033392 - 26033512
Alignment:
Q  90 atgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacac-cgacatgacacctatgattacacttaat 188  Q
    ||||| |||| ||||||||||||||| ||||||| |||| |||||||||  ||| ||||||| || |||||  |||  ||||| | | |||||||| |||    
T  26033392 atgaaacacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtca-tgtctgacaccgacacgagac-cgacacttgtaattacactgaat 26033489  T
Q  189 tatgtcattttctcaaattatta 211  Q
    ||||| ||||| |||||||||||    
T  26033490 tatgtgattttttcaaattatta 26033512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 208
Target Start/End: Complemental strand, 37776035 - 37775993
Alignment:
Q  166 tgacacctatgattacacttaattatgtcattttctcaaatta 208  Q
    |||||| | |||||||| |||||||||||||||||||||||||    
T  37776035 tgacacatgtgattacatttaattatgtcattttctcaaatta 37775993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 4909204 - 4909159
Alignment:
Q  166 tgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||| |||||||||| | |||||||| |||||||||||||||||    
T  4909204 tgacacatatgattacaatgaattatgtaattttctcaaattatta 4909159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 30813917 - 30813864
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgca 140  Q
    ||||||||||||| ||||||||||||||| | |||| | | |||||||||||||    
T  30813917 gctatgaagcacggacactcctcggattaggcgtgttctgatgtcggacacgca 30813864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 7328698 - 7328742
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| ||| |||||||| |||||||| |||||||||||||||||    
T  7328698 gacacatataattacactaaattatgttattttctcaaattatta 7328742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 20427642 - 20427686
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| |||||||||| |||| |||||||| ||||||||||||||    
T  20427642 gacacatatgattacatttaaatatgtcatcttctcaaattatta 20427686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 21880271 - 21880223
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||||||| ||||| ||||||||| | |||||| |||||||||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggaca 21880223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 22683762 - 22683806
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||||||| |||| |||||| |||| ||||||||||||||    
T  22683762 gacacctatgattgcactgaattatatcatattctcaaattatta 22683806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 25239663 - 25239754
Alignment:
Q  119 gtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||| |||||||||||| | ||| |||| || || |||||  ||||||||||||| |||||||| | ||||   |||||||||||||||||    
T  25239663 gtgtcctggtgtcggacacacgtcaatgtccgacaccgacaca-acatgacacctataattacactgagttataaaattttctcaaattatta 25239754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 40287306 - 40287350
Alignment:
Q  92 gaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||| ||||||||||||||| |  |||||||||||||||||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcggaca 40287350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 44172905 - 44172941
Alignment:
Q  175 tgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||| | ||||||||||||||||||||||||||    
T  44172905 tgattacattgaattatgtcattttctcaaattatta 44172941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 211
Target Start/End: Complemental strand, 2419988 - 2419865
Alignment:
Q  86 ggctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacactt 185  Q
    |||||||||||||| |||||| |||||||| ||||||||||| |||||||||||||| |||||||| ||  |||| |   ||||||  |||||||||||     
T  2419988 ggctatgaagcacggacactcatcggattaggtgtgtcccggggtcggacacgcatcggtgtctgacaccaacacggcactgacac--atgattacactg 2419891  T
Q  186 aattatgtcattttctcaaattatta 211  Q
    |||| ||| |||||||||||||||||    
T  2419890 aattgtgtaattttctcaaattatta 2419865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 43554584 - 43554529
Alignment:
Q  156 gacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||| |||||||||||||||||| |||||| |||||||||||||||||||    
T  43554584 gacaccgacacgacacctatgattacactaaattatatcattttctcaaattatta 43554529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 39695995 - 39696049
Alignment:
Q  156 gacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatt 210  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||||||||    
T  39695995 gacaccgacacgacacctatgattacactaaattatatcattttctcaaattatt 39696049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 26205694 - 26205805
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    |||||||||||| ||||   | |||||| |||||||||||||||||| |||| |  ||||| ||      |||| ||| |||||||||||||||||| ||    
T  26205694 ctatgaagcacggacaccttttggattacgtgtgtcccggtgtcggatacgcgttggtgtccga------caccaacacgacacctatgattacactgaa 26205787  T
Q  188 ttatgtcattttctcaaa 205  Q
    ||||||||||||||||||    
T  26205788 ttatgtcattttctcaaa 26205805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 31264495 - 31264445
Alignment:
Q  162 gacatgacacctatgattacacttaattatgtcattttctcaaattattac 212  Q
    |||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  31264495 gacacgacacttatgattacactgaattatgtcattttctcaaattattac 31264445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 17393305 - 17393354
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||||||    
T  17393305 ctatgaagcacgaacattcctcggattacgagtgtcccggtgtcggacac 17393354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 5467973 - 5468029
Alignment:
Q  155 tgacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||||| ||||||||| |||||||| |||||||| ||||| |||||||||||    
T  5467973 tgacaccgacacgacacctataattacactgaattatgtgattttatcaaattatta 5468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 38464313 - 38464361
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  38464313 ctatgaagcacagacactcctcggattaggtgtgtcccggtgtcggaca 38464361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 2437031 - 2436980
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||||||||||||||||||||||| | |||||  |||||||||||||    
T  2437031 gctatgaagcacgaacactcctcggattaggcgtgtcttggtgtcggacacg 2436980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 17593662 - 17593713
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||| ||| ||||||||||||||||| |||||||||||| |||||||    
T  17593662 gctatgaagtacggacactcctcggattaagcgtgtcccggtgttggacacg 17593713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 2577193 - 2577231
Alignment:
Q  173 tatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  2577193 tatgattacactaaattatgtcattttctcaaattatta 2577231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 14873641 - 14873591
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| ||||||||||||||| | |||||||||||| |||||||    
T  14873641 ctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacg 14873591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 18607094 - 18607148
Alignment:
Q  157 acaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||| |||| |||||||||||||||| | |||||||| |||||||||||||||||    
T  18607094 acacagacacgacacctatgattacattgaattatgttattttctcaaattatta 18607148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 21577117 - 21577159
Alignment:
Q  169 cacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||| ||||||||||||||||| |||||||||||||||||    
T  21577117 cacctattattacacttaattatgttattttctcaaattatta 21577159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 18288053 - 18288102
Alignment:
Q  162 gacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||||||||||||| ||| | ||| ||||||||||||||||||||    
T  18288053 gacatgacacctatgattatactgagttaagtcattttctcaaattatta 18288102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 21137749 - 21137696
Alignment:
Q  159 accgacatgacacctatgattacacttaattatgtcattttctcaaattattac 212  Q
    ||||||| ||||||||||||| |||| ||||| |||||||||||| ||||||||    
T  21137749 accgacacgacacctatgatttcactgaattacgtcattttctcagattattac 21137696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 21576682 - 21576735
Alignment:
Q  85 tggctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||||||||| ||||||||||||||| | ||||||| ||||| ||||||    
T  21576682 tggctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacg 21576735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 28588681 - 28588726
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattattac 212  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||||    
T  28588681 gacacctataattacactgaattatgtgattttctcaaattattac 28588726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 42469270 - 42469229
Alignment:
Q  170 acctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||||||||| || |||||||||||||||||||||||    
T  42469270 acctatgattacactaaaatatgtcattttctcaaattatta 42469229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 19820328 - 19820376
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||||||| ||||||||| ||||| | ||||||||||||||||||    
T  19820328 ctatgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca 19820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 21190998 - 21191046
Alignment:
Q  90 atgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||| ||||||||||||||| | ||||||||| ||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacg 21191046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 211
Target Start/End: Complemental strand, 30098456 - 30098334
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgaca-tgacacctatgattacactta 186  Q
    |||||||||||| ||| ||||||||||| |||||||| |||||| ||||||  || ||||| || ||||||  ||| |  |||| |||| |||||| | |    
T  30098456 ctatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtc-gtgtccgacactgac-tcgataccgacatctataattacattga 30098359  T
Q  187 attatgtcattttctcaaattatta 211  Q
    ||||||| |||||||||||||||||    
T  30098358 attatgtgattttctcaaattatta 30098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 211
Target Start/End: Complemental strand, 39698671 - 39698549
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgaca-tgacacctatgattacactta 186  Q
    |||||||||||| ||||||||||||||| | ||||| |||||||||| ||   || ||||| || || |||| ||||| |||||| | | |||||||| |    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtc-gtgtccgacaccgaca-cgacactgacacttgtaattacactga 39698574  T
Q  187 attatgtcattttctcaaattatta 211  Q
    ||||||| ||||| |||||||||||    
T  39698573 attatgtgattttttcaaattatta 39698549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 19293431 - 19293474
Alignment:
Q  168 acacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||| ||||||||||||||||||||| ||||||| |||||||||    
T  19293431 acacatatgattacacttaattatgttattttcttaaattatta 19293474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 25863267 - 25863212
Alignment:
Q  156 gacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| |||| ||||| ||| |||||||| |||||| |||||||||||||||||||    
T  25863267 gacactgacacgacacttataattacactgaattatatcattttctcaaattatta 25863212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 135
Target Start/End: Original strand, 37328775 - 37328822
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggac 135  Q
    |||||||||||| ||||||||||||||||| || ||||||| ||||||    
T  37328775 ctatgaagcacggacactcctcggattaagcgtatcccggtatcggac 37328822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 7997108 - 7997166
Alignment:
Q  90 atgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtc 148  Q
    ||||||||| |||||| |||| |||| |||||||| | |||||||||||| ||||||||    
T  7997108 atgaagcacaaacacttctcgaattaggtgtgtcctgatgtcggacacgcgtcagtgtc 7997166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 17088402 - 17088360
Alignment:
Q  96 cacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||| ||||||||||||||| | ||||||||||||||||||||    
T  17088402 cacggacactcctcggattaggcgtgtcccggtgtcggacacg 17088360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 35017162 - 35017112
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| ||||||||||||||| | |||||||| ||| |||||||    
T  35017162 ctatgaagcacggacactcctcggattaggcgtgtcccgatgttggacacg 35017112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 39268541 - 39268587
Alignment:
Q  91 tgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    ||||||||| ||||||||||||||| | ||||||| |||||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacac 39268587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 4344787 - 4344750
Alignment:
Q  174 atgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  4344787 atgattacactgaattatgtcattttttcaaattatta 4344750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 7677836 - 7677787
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    ||||||||||||  || |||||||||||| | ||||||||||||||||||    
T  7677836 gctatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggaca 7677787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 11596469 - 11596506
Alignment:
Q  174 atgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  11596469 atgattacattgaattatgtcattttctcaaattatta 11596506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 43565000 - 43564951
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    |||||||||||| ||||| ||||||||| | ||||||||| |||||||||    
T  43565000 ctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacac 43564951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 2548439 - 2548395
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| |||||||||||| |||||||| |||||||| ||||||||    
T  2548439 gacacttatgattacactgaattatgtaattttctctaattatta 2548395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 17123166 - 17123119
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||||||| ||||||||||||||| | ||||||| ||||||||||    
T  17123166 ctatgaagcacggacactcctcggattaggcgtgtccc-gtgtcggaca 17123119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 19552476 - 19552524
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    ||||||| |||| ||||||||||||||| ||||||||  ||||||||||    
T  19552476 ctatgaaacacggacactcctcggattaggtgtgtccaagtgtcggaca 19552524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 21194213 - 21194253
Alignment:
Q  168 acacctatgattacacttaattatgtcattttctcaaatta 208  Q
    ||||| ||||||||||| |||||||| ||||||||||||||    
T  21194213 acaccaatgattacactgaattatgtgattttctcaaatta 21194253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 23015996 - 23016040
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||| |||||||| |||||||| |||||||||||| ||||    
T  23015996 gacacctataattacactgaattatgtgattttctcaaatgatta 23016040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 36838595 - 36838551
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| ||| |||||||| |||||||| |||||||||||||||||    
T  36838595 gacacatataattacactaaattatgtaattttctcaaattatta 36838551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 225199 - 225319
Alignment:
Q  90 atgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaatt 189  Q
    |||||||||| |||||||||| |||| | |||||| ||||||| |||||| |||||||| || || |||||| ||| ||||| ||| |||||| |  |||    
T  225199 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcgaacacgcgtcagtgtccgacac-gacaccaacacgacacttataattacattgtatt 225297  T
Q  190 atgtcattttctcaaattatta 211  Q
    ||||||||||||||||||||||    
T  225298 atgtcattttctcaaattatta 225319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 211
Target Start/End: Original strand, 6936334 - 6936451
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    |||||||||| | ||||||||||||||||| || | | ||||||||| | || || ||||| || || |||||      |||||||||||||||||||||    
T  6936334 ctatgaagcatggacactcctcggattaagggtattctggtgtcggatatgcgtcggtgtccgacacagacac------gacacctatgattacacttaa 6936427  T
Q  188 ttatgtcattttctcaaattatta 211  Q
    |||||||||||||||| |||||||    
T  6936428 ttatgtcattttctcagattatta 6936451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 211
Target Start/End: Original strand, 40747707 - 40747824
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    |||||||||||| || |||||||||||| | ||||||| |||| ||||| | ||| ||||| ||      |||| ||||||||||||| |||||| | ||    
T  40747707 ctatgaagcacggacgctcctcggattaggggtgtccctgtgtgggacatggatcggtgtccga------caccaacatgacacctataattacattgaa 40747800  T
Q  188 ttatgtcattttctcaaattatta 211  Q
    ||||||||||||||||||||||||    
T  40747801 ttatgtcattttctcaaattatta 40747824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 42004943 - 42004998
Alignment:
Q  156 gacaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||    
T  42004943 gacaccgacacaacacctatgattacactaaattatgtcattttctcaaattatta 42004998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 211
Target Start/End: Complemental strand, 9828174 - 9828052
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgaca-tgacacctatgattacactta 186  Q
    |||||||||||| |||||||||||||||   ||||||||||||||||||||  || |||||||| || |||| |||||  ||||| ||  |||||||| |    
T  9828174 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtc-gtgtctgacacggaca-cgacaccgacacataaaattacactga 9828077  T
Q  187 attatgtcattttctcaaattatta 211  Q
    ||||||| ||||| |||||||||||    
T  9828076 attatgtgattttatcaaattatta 9828052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 211
Target Start/End: Original strand, 20157284 - 20157401
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    |||||||||||| | |||||||  |||| ||||||| ||||||||||||||| || ||||| || || ||||||     ||||| |||||||||||| ||    
T  20157284 ctatgaagcacggatactcctcaaattaggtgtgtctcggtgtcggacacgcgtcggtgtcggacac-gacacc-----gacacatatgattacactgaa 20157377  T
Q  188 ttatgtcattttctcaaattatta 211  Q
    |||||| ||||||||| |||||||    
T  20157378 ttatgtgattttctcacattatta 20157401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 46940748 - 46940799
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgc 139  Q
    |||||||||||||||||||||||||||| | |||| ||||||||||||||||    
T  46940748 ctatgaagcacgaacactcctcggattaggcgtgttccggtgtcggacacgc 46940799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 39101179 - 39101233
Alignment:
Q  157 acaccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||| | ||||||||| ||||||||||||||||| |||||||||||||||||    
T  39101179 acaccgaaacgacacctataattacacttaattatgttattttctcaaattatta 39101233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 22794017 - 22794078
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtc 148  Q
    ||||||||||||| |||||||||| |||| ||||||||||| |||||||| || ||||||||    
T  22794017 gctatgaagcacgtacactcctcgaattaggtgtgtcccggagtcggacatgcgtcagtgtc 22794078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 5944413 - 5944365
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||||||||||||||||||||||| | || |||||||||||||||    
T  5944413 ctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggaca 5944365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 211
Target Start/End: Original strand, 17831462 - 17831582
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaa 187  Q
    ||||||| || | ||||||||  ||||| | |||||||||||||||||||   || ||||| || |||||||| |||  ||||| |||||||||||| ||    
T  17831462 ctatgaaacatggacactcctaagattaggcgtgtcccggtgtcggacacatgtcggtgtccgacactgacac-gac--gacacatatgattacactgaa 17831558  T
Q  188 ttatgtcattttctcaaattatta 211  Q
    | |||| |||||||||||||||||    
T  17831559 taatgtgattttctcaaattatta 17831582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 19562555 - 19562605
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  19562555 gctatgaagcacga-cactcctcggattaggtgtgtccctgtgtcggacacg 19562605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 42359391 - 42359438
Alignment:
Q  90 atgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    |||||||||| ||||||||||||||| | |||||||||||||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 42359438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 18190048 - 18190098
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||| |  ||||||||||||||| ||||||||||||||||||||||    
T  18190048 ctatgaagcgcatacactcctcggattaggtgtgtcccggtgtcggacacg 18190098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 40917879 - 40917829
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| ||| ||||||||||| | ||||||||||||||||||||    
T  40917879 ctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacg 40917829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 1209867 - 1209822
Alignment:
Q  93 aagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||||    
T  1209867 aagcacgaacacttctcggattaggtgtgtcctggtgtcggacacg 1209822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 1486646 - 1486760
Alignment:
Q  90 atgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgacatgacacctatgattacacttaatt 189  Q
    |||||||||  ||||||||||||||| | ||||||||||||||||||||  || ||||| || || ||||||     ||||| ||| |||||||| ||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtc-gtgtccgacac-gacacc-----gacacttataattacactgaatt 1486738  T
Q  190 atgtcattttctcaaattatta 211  Q
    |||| ||||| |||||||||||    
T  1486739 atgtgattttttcaaattatta 1486760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 10233374 - 10233326
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    ||||||||||| ||||||||| ||||| |||||||| ||||||||||||    
T  10233374 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 10233326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 17778670 - 17778622
Alignment:
Q  90 atgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||||||| ||||||||| |  |||||||||||||||||||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacg 17778622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 36878513 - 36878469
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||| |||||||| |||||||| |||||||||||||||||    
T  36878513 gacacctataattacactgaattatgtgattttctcaaattatta 36878469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 7918154 - 7918197
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtc 131  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||    
T  7918154 ctatgaagcacggacactcctcggattaggtgtgtcctggtgtc 7918197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 16297223 - 16297270
Alignment:
Q  90 atgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    |||||||||| ||||||||||||||| | |||||| ||||||||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacac 16297270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 6427594 - 6427544
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| |||||| || ||||| | ||||||||||||||||||||    
T  6427594 ctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacg 6427544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 9690213 - 9690263
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||||| |||||||  ||||||| | ||||||||||||||||||||    
T  9690213 ctatgaagcacaaacactctccggattaggcgtgtcccggtgtcggacacg 9690263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 21145528 - 21145474
Alignment:
Q  158 caccgacatgacacctatgattacacttaattatgtca-ttttctcaaattatta 211  Q
    |||||||| ||| |||||||||||||| |||||||||| |||| |||||||||||    
T  21145528 caccgacacgacgcctatgattacactgaattatgtcatttttttcaaattatta 21145474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 21365992 - 21366038
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcgga 134  Q
    |||||||||||| ||||||||||||||| | ||||| ||||||||||    
T  21365992 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcgga 21366038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 22515827 - 22515873
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcgga 134  Q
    |||||||||||| ||||||||||||||| | ||||| ||||||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcgga 22515873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 37598950 - 37598900
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| ||||||||||||||| | |||||||  |||||||||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacg 37598900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 3921712 - 3921675
Alignment:
Q  174 atgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  3921712 atgattacattgaattatgtcattttctcaaattatta 3921675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 6414932 - 6414981
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||||| ||||||||||||| || |||||| ||||||| ||||||    
T  6414932 tatgaagcacggacactcctcggatgaaatgtgtcgcggtgtcagacacg 6414981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 6574040 - 6573999
Alignment:
Q  168 acacctatgattacacttaattatgtcattttctcaaattat 209  Q
    ||||||||||||||||| |||||| ||||| |||||||||||    
T  6574040 acacctatgattacactaaattatatcattgtctcaaattat 6573999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 7918217 - 7918262
Alignment:
Q  166 tgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||| ||| |||||||| |||||||| |||||||||||||||||    
T  7918217 tgacacatataattacactgaattatgtgattttctcaaattatta 7918262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 16011339 - 16011290
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||||||||| || ||| ||||||||||||  |||||||||||||    
T  16011339 tatgaagcacgaacattcttcgaattaagtgtgtcatggtgtcggacacg 16011290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 23219608 - 23219653
Alignment:
Q  93 aagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||| |||||| ||||||||| ||||||| ||||||||||||||    
T  23219608 aagcacaaacacttctcggattaggtgtgtcacggtgtcggacacg 23219653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 29144320 - 29144369
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    |||||||||||| |||||| |||||||| | |||| ||||||||||||||    
T  29144320 ctatgaagcacggacactcttcggattaggcgtgttccggtgtcggacac 29144369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 30847726 - 30847771
Alignment:
Q  166 tgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||| |||||||||| | |||||||||||||| |||||||||||    
T  30847726 tgacacatatgattacattgaattatgtcattttttcaaattatta 30847771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 31667469 - 31667432
Alignment:
Q  175 tgattacacttaattatgtcattttctcaaattattac 212  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  31667469 tgattacatttaattatgtcattttctaaaattattac 31667432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 34712389 - 34712434
Alignment:
Q  166 tgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||| ||| |||||||| |||||||| |||||||||||||||||    
T  34712389 tgacacatataattacactaaattatgttattttctcaaattatta 34712434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 42325601 - 42325568
Alignment:
Q  178 ttacacttaattatgtcattttctcaaattatta 211  Q
    ||||||| ||||||||||||||||||||||||||    
T  42325601 ttacactgaattatgtcattttctcaaattatta 42325568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 44296502 - 44296546
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattattac 212  Q
    ||||| |||||||| ||| |||||||||||||||||||||||||||    
T  44296502 gacacatatgatta-actaaattatgtcattttctcaaattattac 44296546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 373099 - 373055
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||||    
T  373099 gacacatatgattaaactaaatcatgtcattttctcaaattatta 373055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 398772 - 398816
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||| |||||||| |||||||| ||||| |||||||||||    
T  398772 gacacctataattacactgaattatgtgattttttcaaattatta 398816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 1864887 - 1864931
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||| ||| |||||||| |||||||| |||||||||||||||||    
T  1864887 gacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 9630561 - 9630597
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcc 124  Q
    |||||||||||||||||||||||||||| | ||||||    
T  9630561 ctatgaagcacgaacactcctcggattaggcgtgtcc 9630597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 11412775 - 11412819
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||||| ||| | |||||||||||||||||| |||||||    
T  11412775 gacacctatgatcacattgaattatgtcattttctcatattatta 11412819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 11634066 - 11634114
Alignment:
Q  91 tgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgc 139  Q
    ||||||||| |||||| |||||||  |||||||| ||||||||||||||    
T  11634066 tgaagcacggacactcttcggatttggtgtgtcctggtgtcggacacgc 11634114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 11634131 - 11634175
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||||||||||||| | ||||||||  ||||||||||||||||    
T  11634131 gacacctatgattacattaaattatgttgttttctcaaattatta 11634175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 22794085 - 22794129
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||| ||||||||  ||||||||||||| |||||||||||    
T  22794085 gacacctataattacactgtattatgtcattttttcaaattatta 22794129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 22881567 - 22881611
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcg 132  Q
    |||||||||||| |||||||||||||||   ||||||||||||||    
T  22881567 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcg 22881611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 24176374 - 24176418
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||| |||||||| ||| |||| |||||||||||||||||    
T  24176374 gacacctataattacactgaatgatgttattttctcaaattatta 24176418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 27965939 - 27965983
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtc 131  Q
    ||||||||||| | ||||||||||||||| | |||||||||||||    
T  27965939 gctatgaagcatggacactcctcggattaggcgtgtcccggtgtc 27965983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 47989627 - 47989579
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||||||| ||||||||||||||| | |||||||| |||| ||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagaca 47989579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 139
Target Start/End: Original strand, 403 - 453
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgc 139  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgc 453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 209
Target Start/End: Complemental strand, 57052 - 56932
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgaca-tgacacctatgattacacttaa 187  Q
    |||||||||| |||||||||| ||||| |||| | |||||||| |||||||||  || || |  || ||||| |||| |||||| |||||||||||| ||    
T  57052 tatgaagcacaaacactcctcagattaggtgttttccggtgtcagacacgcattggtctccgtcaccgacac-gacactgacacttatgattacactgaa 56954  T
Q  188 ttatgtcattttctcaaattat 209  Q
    |||| |||||||||||||||||    
T  56953 ttatatcattttctcaaattat 56932  T

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Target: scaffold0598 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 8052 - 8104
Alignment:
Q  159 accgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||| || ||||||| ||||||| ||||||||||||||||||||||||||    
T  8052 accgacacgatacctatgtttacactgaattatgtcattttctcaaattatta 8104  T

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Target: scaffold0128 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 32822 - 32774
Alignment:
Q  89 tatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacac 137  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  32822 tatgaagcaccgacactcctcggattatgtgtgtcccggtgtcggacac 32774  T

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Target: scaffold0199 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 2008 - 1957
Alignment:
Q  160 ccgacatgacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    |||||| |||||||||||||||||| || |||||||||||| ||||||||||    
T  2008 ccgacacgacacctatgattacactaaaatatgtcattttcacaaattatta 1957  T

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Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 236914 - 236973
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgt 147  Q
    |||||||||||  ||||||||| ||||| ||||||||||||||| |||||||||| ||||    
T  236914 ctatgaagcacagacactcctcagattaggtgtgtcccggtgtcagacacgcatccgtgt 236973  T

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Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 241724 - 241674
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||| ||||| ||||||||| | ||||||||||||||||||||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacg 241674  T

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Target: scaffold0793 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 4821 - 4869
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggaca 136  Q
    |||||||||||| ||||||||||||||| | ||||||| ||||||||||    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 4869  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 135263 - 135313
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    ||||||||||||||||| |||| ||||| | |||||| |||||||||||||    
T  135263 ctatgaagcacgaacacgcctcagattaggcgtgtcctggtgtcggacacg 135313  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 71855 - 71805
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacg 138  Q
    |||||||||||  |||||||||||||||   ||||||||||||||||||||    
T  71855 ctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacg 71805  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 263303 - 263423
Alignment:
Q  90 atgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacaccgaca-tgacacctatgattacacttaat 188  Q
    ||||| |||| ||||||||||||||| | |||||  ||| ||| |||||  || |||||||| || ||||| |||| |||||| ||| |||||||| |||    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtc-gtgtctgacaccgacac-gacactgacacttataattacactgaat 263400  T
Q  189 tatgtcattttctcaaattatta 211  Q
    |||||  ||||||||||||||||    
T  263401 tatgtggttttctcaaattatta 263423  T

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Target: scaffold0086 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 3059 - 2987
Alignment:
Q  87 gctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacac 160  Q
    |||||| |||||| ||||||||||||||| | |||| ||||||||| |||||  || ||||||||||| |||||    
T  3059 gctatggagcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtc-gtgtctgataccgacac 2987  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 8564 - 8635
Alignment:
Q  88 ctatgaagcacgaacactcctcggattaagtgtgtcccggtgtcggacacgcatcagtgtctgatactgacac 160  Q
    |||||||||||| |||||||||| |||| | |||| || |||||||||||| ||| ||||| ||||| |||||    
T  8564 ctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatc-gtgtccgataccgacac 8635  T

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Target: scaffold0085 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 26050 - 26006
Alignment:
Q  167 gacacctatgattacacttaattatgtcattttctcaaattatta 211  Q
    ||||||||||||| |||| ||| |||||||||||||| |||||||    
T  26050 gacacctatgattgcactgaatcatgtcattttctcacattatta 26006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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