View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13558_low_5 (Length: 274)
Name: NF13558_low_5
Description: NF13558
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13558_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 25 - 259
Target Start/End: Complemental strand, 191384 - 191150
Alignment:
| Q |
25 |
cctaatcctctaggggaagtgcacaagacaagcttattggtgttcattagtaacaaagagatttatcaagctctcatgagcatgaagtcctacaaagttc |
124 |
Q |
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| T |
191384 |
cctaatcctctaggggaagtgcacaagacaagcttattggtgttcattagtaacaaagagatttatcaagctctcatgagcatgaagtcctacaaagttc |
191285 |
T |
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| Q |
125 |
caggtctagatgaattccaaccaatcttttataagatgttttggggggttattggtaataatgtatgctcctttgttagtagcactttcaaaagggggat |
224 |
Q |
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| T |
191284 |
caggtctagatgaattccaaccaatcttttataagatgttttgggaggttattggtaataatgtatgctcctttgttagtagcactttcaaaagggggat |
191185 |
T |
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| Q |
225 |
cgttgatccttattatgttgcaactctgatgatgt |
259 |
Q |
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||||||||||||||||||||||||||| ||||||| |
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| T |
191184 |
cgttgatccttattatgttgcaactcttatgatgt |
191150 |
T |
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