View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13559_low_6 (Length: 505)

Name: NF13559_low_6
Description: NF13559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13559_low_6
NF13559_low_6
[»] chr5 (2 HSPs)
chr5 (7-488)||(11158650-11159131)
chr5 (17-105)||(22437118-22437206)
[»] chr4 (1 HSPs)
chr4 (18-488)||(10392425-10392896)
[»] chr2 (4 HSPs)
chr2 (18-488)||(31071565-31072036)
chr2 (31-450)||(43689051-43689472)
chr2 (19-438)||(19517759-19518182)
chr2 (32-290)||(37048892-37049150)
[»] chr1 (3 HSPs)
chr1 (363-483)||(43944246-43944366)
chr1 (358-414)||(22191622-22191678)
chr1 (332-488)||(33142996-33143152)
[»] chr3 (1 HSPs)
chr3 (16-127)||(13797603-13797714)
[»] chr7 (2 HSPs)
chr7 (378-488)||(4344082-4344192)
chr7 (147-191)||(25708507-25708551)
[»] chr8 (2 HSPs)
chr8 (380-489)||(8902091-8902200)
chr8 (380-431)||(26074190-26074241)
[»] scaffold0062 (3 HSPs)
scaffold0062 (332-410)||(17290-17368)
scaffold0062 (332-410)||(27458-27536)
scaffold0062 (332-410)||(37624-37702)


Alignment Details
Target: chr5 (Bit Score: 386; Significance: 0; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 7 - 488
Target Start/End: Original strand, 11158650 - 11159131
Alignment:
Q  7 tcgaagaatatgccacaactctctgaaaatggtacaagaaacaaacaagtgttgagccgtttccatttccccgcactcagtcacacacatctgcgcctca 106  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11158650 tcgaacaagatgccacaactctctgaaaatggtacaagaaacaaacaagtgttgagccgtttccatttccccgcactcagtcacacacatctgcgcctca 11158749  T
Q  107 ggagagatgatcccgcgagccaacatattagattttatacgcaacctgttgcggagaagacgccacgcaaggagagacacttttattagaacatgtatgt 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  11158750 ggagagatgatcccgcgagccaacatattagattttatacgcaacttgttgcggagaagatgccacgcaaggagagacacttttattagaacatgtctgt 11158849  T
Q  207 gccaaattaacttagaaaccacatccaacacctaacattcatttgcagtaagcacatgatacacattgcggacagaataaccaccattatcaaggtgcca 306  Q
    ||||||| |||||||||||| |||||||||||| || ||||| ||||||||||| |||||||||| ||| |||| |||||||||||||||||||||||||    
T  11158850 gccaaatgaacttagaaaccgcatccaacacctgactttcatctgcagtaagcatatgatacacactgcagacaaaataaccaccattatcaaggtgcca 11158949  T
Q  307 attccatcggtcagaaatcgaaaagtgcaaaacaacatgagacaacagcaacctacactcccgaaccaagtcttcctcccaatcccacaacctcctacgc 406  Q
    |||||||| |||||||||| ||| |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  11158950 attccatcagtcagaaatcaaaacgtgcaaaacaacatcagacaacaacaacctacactcccgaaccaagtcctcctcccaatcccacaacctcctacac 11159049  T
Q  407 cactgccaagtctctcccccttcctccacccccaacgaaaacatttcctccaccaaacaatttttattaacacttaaatcat 488  Q
    | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  11159050 cgctgccaagtctctcccccttcctccacccccaacgcgaacatttcctccaccaaacaatttttattaacacttaaatcat 11159131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 22437118 - 22437206
Alignment:
Q  17 tgccacaactctctgaaaatggtacaagaaacaaacaagtgttgagccgtttccatttccccgcactcagtcacacacatctgcgcctc 105  Q
    ||||| ||||||||||| ||||| ||||||||||| || |||||||| ||||||| ||| |||||| | || |||||||| || |||||    
T  22437118 tgccataactctctgaatatggtgcaagaaacaaataaatgttgagctgtttccacttctccgcacccggtgacacacatatgagcctc 22437206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 168; Significance: 8e-90; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 18 - 488
Target Start/End: Complemental strand, 10392896 - 10392425
Alignment:
Q  18 gccacaactctctgaaaatggtacaagaaacaaacaagtgttgagccgtttccatttccccgcactcagtcacacacatctgcgcctcaggagagatgat 117  Q
    |||||||||||| |||||||| |||  |||| ||||| ||||| |||||||||| ||| || |||  ||||||||||||||| | |||| ||||||| ||    
T  10392896 gccacaactctcggaaaatgggacacaaaacgaacaaatgttgcgccgtttccacttctccacacctagtcacacacatctgagtctcatgagagataat 10392797  T
Q  118 cccgcgagccaacatattagattttatacgcaacctgttgcggagaagacgccacgcaaggagagacacttttattagaacatgtatgtgccaaattaac 217  Q
    |||||| |||| || |||||||||  || ||||||||||||| ||||||||||| ||||||| |||||||||| || | |||||| | || ||||| |||    
T  10392796 cccgcgggccatcaaattagatttggtaggcaacctgttgcgaagaagacgccaagcaaggatagacactttttttgggacatgtctatgtcaaatgaac 10392697  T
Q  218 ttagaaaccacatccaacacctaacattcatttgcagtaagcacatgatacacattgcggacagaataaccacc---attatcaaggtgccaattccatc 314  Q
    || ||||||  |||||| |||| ||  | || ||||||||||| |||||| ||| | |||||  |||| |||||   ||||||||| |||| ||||||||    
T  10392696 ttcgaaaccgtatccaaaacctgactattatctgcagtaagcatatgataaacactacggacgaaatagccaccattattatcaagatgccgattccatc 10392597  T
Q  315 ggtcagaaatcgaaaagtgcaaaacaacatgagacaacagcaacctacactcccgaaccaagtcttcctcccaatcccacaacctcctacgccactgcca 414  Q
    |||||  |||| |||  || |||| || || ||||||||  |||| |||| ||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  10392596 ggtcaacaatcaaaacttgtaaaataatatcagacaacaataaccgacac-cccgaaccaagtcctcctctcaatcccacaacctcctacgccactgcca 10392498  T
Q  415 agtctctcccccttcctccacccccaacgaaaacatttcctccaccaaacaatttttattaacacttaaatcat 488  Q
    || ||||||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||||||||||||||    
T  10392497 agcctctccccc-tcctccacccccaacgcaaacatttcccccactaaacaaattttattaacacttaaatcat 10392425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 7e-81; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 18 - 488
Target Start/End: Complemental strand, 31072036 - 31071565
Alignment:
Q  18 gccacaactctctgaaaatggtacaagaaacaaacaagtgttgagccgtttccatttccccgcactcagtcacacacatctgcgcctcaggagagatgat 117  Q
    |||||||||||| |||||||| ||| |||   ||||||||||| |||||||||| |||  ||||| |||||| |||||| || |||||| ||||||| ||    
T  31072036 gccacaactctcggaaaatggaacacgaacggaacaagtgttgcgccgtttccacttcttcgcacccagtcatacacatatgagcctcatgagagataat 31071937  T
Q  118 cccgcgagccaacatattagattttatacgcaacctgttgcggagaagacgccacgcaaggagagacacttttattagaacatgtatgtgccaaattaac 217  Q
    || |||||||| || || ||||||  || ||||||||||||| ||||||||||| ||||||| |||||||||| |  | |||||| ||||||| || | |    
T  31071936 cctgcgagccatcagatcagatttggtaggcaacctgttgcgaagaagacgccaagcaaggatagacacttttgtcgggacatgtctgtgccacatgagc 31071837  T
Q  218 ttagaaaccacatccaacacctaacat-tcatttgcagtaagcacatgatacacattgcggacagaataaccaccattatc---aaggtgccaattccat 313  Q
    || ||||||   || || |||| | || ||||||||||||||||  || || ||| | ||||||||||| |||||||||||   ||||||||||||||||    
T  31071836 tttgaaaccgtgtctaa-accttagatgtcatttgcagtaagcatgtggtaaacactacggacagaatagccaccattatcttcaaggtgccaattccat 31071738  T
Q  314 cggtcagaaatcgaaaagtgcaaaacaacatgagacaacagcaacctacactcccgaaccaagtcttcctcccaatcccacaacctcctacgccactgcc 413  Q
    ||||| | | ||||||  || |||| || || ||||||| | |||| | ||| |||||||||||| ||||||||||||||||||||||||||||||| ||    
T  31071737 cggtc-gcagtcgaaacttgtaaaataatatcagacaacggtaaccgatacttccgaaccaagtcctcctcccaatcccacaacctcctacgccacttcc 31071639  T
Q  414 aagtctctcccccttcctccacccccaacgaaaacatttcctccaccaaacaatttttattaacacttaaatcat 488  Q
    ||| ||||||||| |||||||||||||||  |||||||||| |||  ||||||||||||||||||||||||||||    
T  31071638 aagcctctccccc-tcctccacccccaacacaaacatttcccccattaaacaatttttattaacacttaaatcat 31071565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 31 - 450
Target Start/End: Complemental strand, 43689472 - 43689051
Alignment:
Q  31 gaaaatggtacaagaaacaaacaagtgttgagccgtttccatttccccgcactcagtcacacacatctgcgcctcaggagagatgatcccgcgagccaac 130  Q
    |||||||||||||||||| ||||| ||||| |||||||||| ||| |||||| ||| ||||||||| || |||||| |||||||||||||||||||||      
T  43689472 gaaaatggtacaagaaacgaacaaatgttgtgccgtttccacttcaccgcacccagccacacacatttgtgcctcatgagagatgatcccgcgagccaga 43689373  T
Q  131 atattagattttatacgcaacctgttgcggagaagacgccacgcaaggagagacacttttattagaacatgtatgtgccaaattaacttagaaaccacat 230  Q
    | |||||||||  || |||| ||||||||||| || || || |||||||||||||| ||||  ||||||||||||||||||||||||||||||| |  ||    
T  43689372 agattagatttggtaggcaatctgttgcggagtagtcgtcatgcaaggagagacacctttaccagaacatgtatgtgccaaattaacttagaaatcgtat 43689273  T
Q  231 ccaacacctaacattcatttgcagtaagcacatgatacacattgcggacagaataaccacc---attatcaaggtgccaattccatcggtcagaaatcga 327  Q
    |||  || |  |  |||| |||||| ||||  ||||| ||| | | |||| |||| |||||   |||||||||| |||||||||||||| |||  |||||    
T  43689272 ccataacatgtctgtcatctgcagtgagcatgtgataaacactacagacataatagccaccattattatcaaggcgccaattccatcggccagtgatcga 43689173  T
Q  328 aaagtgcaaaacaacatgagacaacagcaacctacactcccgaaccaagtcttcctcccaatcccacaacctcctacgccactgccaagtctctccccct 427  Q
    ||  ||||||||||  |  ||||||| ||||||||||||||| | ||  || |||||||| |||||||||||||  ||||||  |||||||||||||||     
T  43689172 aacatgcaaaacaatgtcggacaacaacaacctacactcccgtaacatctcctcctcccactcccacaacctccgccgccaccaccaagtctctcccccc 43689073  T
Q  428 tcctccacccccaacgaaaacat 450  Q
    ||||||| |||||||||||||||    
T  43689072 tcctcca-ccccaacgaaaacat 43689051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 438
Target Start/End: Complemental strand, 19518182 - 19517759
Alignment:
Q  19 ccacaactctctgaaaatggtacaagaaacaaacaagtgttgagccgtttccatttccccgcactc-agtcacacacatctgcgcctcaggagagatgat 117  Q
    ||||||||| ||||||||||  |||||||||||||| ||||| || ||||||| ||| |||||| | |||||||||| | || |||||| |||| |||||    
T  19518182 ccacaactcactgaaaatggagcaagaaacaaacaaatgttgcgctgtttccacttcaccgcaccccagtcacacacctgtgagcctcatgagaaatgat 19518083  T
Q  118 cccgcgagccaacatattagattttatacgcaacctgttgcggagaagacgccacgcaaggagagacacttttattagaacatgtatgtgccaaattaac 217  Q
    |  |||||||| ||||||||||||  || | |||||||||| || |||||| || || | || ||||||||||    | ||  |  |||||||||| |      
T  19518082 catgcgagccagcatattagatttggtaggaaacctgttgcagaaaagacgtcaagccatgatagacacttttgccggcacccgcctgtgccaaatgaga 19517983  T
Q  218 ttagaaaccacatccaacacctaacattcatttgcagtaagcacatgatacacattgcggacagaataaccacc---attatcaaggtgccaattccatc 314  Q
    || |||  | | || || |||| ||  | || | ||||||||| ||| || ||| | ||||||||||| ||| |   |||||||||||||||||||||||    
T  19517982 tttgaatgcgcctctaaaaccttactgttatctacagtaagcatatggtaaacactacggacagaatagccatcgttattatcaaggtgccaattccatc 19517883  T
Q  315 ggtcagaaatcgaaaagtgcaaaacaacatgagacaacagcaacctacactcccgaaccaagtcttcctcccaatcccacaacctcctacgccactgcca 414  Q
    |||||| ||| ||||  |  ||||||||||  | |||||| |||| |||||||| |||||| || ||||||||||| ||||||||||||| || ||||||    
T  19517882 ggtcagcaattgaaacatttaaaacaacatccgtcaacagtaaccgacactccctaaccaaatcatcctcccaatctcacaacctcctacacctctgcca 19517783  T
Q  415 agtctctcccccttcctccacccc 438  Q
    || |||  | || |||||||||||    
T  19517782 agcctccacaccctcctccacccc 19517759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 290
Target Start/End: Complemental strand, 37049150 - 37048892
Alignment:
Q  32 aaaatggtacaagaaacaaacaagtgttgagccgtttccatttccccgcactcagtcacacacatctgcgcctcaggagagatgatcccgcgagccaaca 131  Q
    ||||||||||||||||| ||||| ||||| ||||||||||  || | |||| |||||||||||||||| |||||  ||||||||||  | |||||||  |    
T  37049150 aaaatggtacaagaaacgaacaaatgttgcgccgtttccacctcactgcacccagtcacacacatctgagcctcctgagagatgatatcacgagccacaa 37049051  T
Q  132 tattagattttatacgcaacctgttgcggagaagacgccacgcaaggagagacacttttattagaacatgtatgtgccaaattaacttagaaaccacatc 231  Q
     ||| |||||  |  | || | |||||||| ||| | ||||||| |||||||||| ||||   | ||||||||||||||||| || || |||||| | ||    
T  37049050 gatttgatttggtgggtaatcagttgcggaaaagtcaccacgcagggagagacacctttaccgggacatgtatgtgccaaatcaattttgaaaccgcgtc 37048951  T
Q  232 caacacctaacattcatttgcagtaagcacatgatacacattgcggacagaataaccac 290  Q
    |||||||| ||  |||| || ||| |||| |||||| ||| | | ||| ||||||||||    
T  37048950 caacacctgactgtcatctgtagtgagcatatgataaacactacagacggaataaccac 37048892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 6e-26; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 363 - 483
Target Start/End: Complemental strand, 43944366 - 43944246
Alignment:
Q  363 actcccgaaccaagtcttcctcccaatcccacaacctcctacgccactgccaagtctctcccccttcctccacccccaacgaaaacatttcctccaccaa 462  Q
    |||||||||| |  || ||||||||||||||||||| ||||||||||||||||| ||| || || ||||||||||| || | |||||||||| |||| |     
T  43944366 actcccgaactagctcctcctcccaatcccacaaccgcctacgccactgccaagcctccccaccctcctccaccccgaatgcaaacatttcccccactag 43944267  T
Q  463 acaatttttattaacacttaa 483  Q
    |||||||||||||||||||||    
T  43944266 acaatttttattaacacttaa 43944246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 414
Target Start/End: Complemental strand, 22191678 - 22191622
Alignment:
Q  358 cctacactcccgaaccaagtcttcctcccaatcccacaacctcctacgccactgcca 414  Q
    |||||||||||  ||||| || ||||||||  ||||||||| |||||||||||||||    
T  22191678 cctacactcccctaccaactcctcctcccatgcccacaaccgcctacgccactgcca 22191622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 488
Target Start/End: Complemental strand, 33143152 - 33142996
Alignment:
Q  332 tgcaaaacaacatgagacaacagcaacctacactcccgaaccaagtcttcctcccaatcccacaacctcctacgccactgccaagtctctcccccttcct 431  Q
    ||||||||||||| |||||||| ||  |||||||| | |||||   | |||||||||| |||||| | ||| | ||||| ||| |  |||||||||||||    
T  33143152 tgcaaaacaacattagacaacaacagactacactcgccaaccatcacctcctcccaataccacaaacgccttctccacttccacgcatctcccccttcct 33143053  T
Q  432 ccacccccaacgaaaacatttcctccaccaaacaatttttattaacacttaaatcat 488  Q
    ||   ||||| | |  ||| |||||||||  ||||| |||||| |||||||| ||||    
T  33143052 cccaacccaatgtagccatctcctccaccgtacaatgtttattgacacttaagtcat 33142996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 13797714 - 13797603
Alignment:
Q  16 atgccacaactctctgaaaatggtacaagaaacaaacaagtgttgagccgtttccatttccccgcactcagtcacacacatctgcgcctcaggagagatg 115  Q
    |||||| ||||||||||| ||||||||||| |  || || ||||| |||||||||| ||  |||||| ||||||| |||||||| |||||  |||||| |    
T  13797714 atgccataactctctgaatatggtacaagagaagaataaatgttgcgccgtttccacttttccgcacccagtcacgcacatctgagcctcctgagagagg 13797615  T
Q  116 atcccgcgagcc 127  Q
    ||||| ||||||    
T  13797614 atcccacgagcc 13797603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 488
Target Start/End: Original strand, 4344082 - 4344192
Alignment:
Q  378 cttcctcccaatcccacaacctcctacgccactgccaagtctctcccccttcctccacccccaacgaaaacatttcctccaccaaacaatttttattaac 477  Q
    ||||||||||||||||||||| ||| ||||||||||||| ||| || || ||||||  |||||||  |  ||| |||||||||  |||||  ||||  ||    
T  4344082 cttcctcccaatcccacaaccgcctgcgccactgccaagcctcacctccctcctcccaccccaacacatgcatatcctccaccgtacaatgcttatcgac 4344181  T
Q  478 acttaaatcat 488  Q
    |||||||||||    
T  4344182 acttaaatcat 4344192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 25708507 - 25708551
Alignment:
Q  147 gcaacctgttgcggagaagacgccacgcaaggagagacactttta 191  Q
    ||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  25708507 gcaacctgttgcggagaagacaccaagcaaggatagacaccttta 25708551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 8902091 - 8902200
Alignment:
Q  380 tcctcccaatcccacaacctcctacgccactgccaagtctctcccccttcctccacccccaacgaaaacatttcctccaccaaacaatttttattaacac 479  Q
    |||||||||||||| |||||||||| |||||  |  | ||| || |||||| ||  ||||  || |||||||||||||||||  | ||||||||| ||||    
T  8902091 tcctcccaatcccataacctcctacaccactctcgcgcctcacctccttccccccaccccttcgcaaacatttcctccaccatccgatttttattgacac 8902190  T
Q  480 ttaaatcatg 489  Q
    ||||||||||    
T  8902191 ttaaatcatg 8902200  T

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Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 26074190 - 26074241
Alignment:
Q  380 tcctcccaatcccacaacctcctacgccactgccaagtctctcccccttcct 431  Q
    |||||||| |||||||||||||| ||||||||||||| ||| || |||||||    
T  26074190 tcctcccagtcccacaacctcctccgccactgccaagcctcaccaccttcct 26074241  T

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Target: scaffold0062 (Bit Score: 31; Significance: 0.00000005; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 410
Target Start/End: Complemental strand, 17368 - 17290
Alignment:
Q  332 tgcaaaacaacatgagacaacagcaacctacactcccgaaccaagtcttcctcccaatcccacaacctcctacgccact 410  Q
    ||||||||||||| || ||||| ||||||||||||||  || ||  | |||| ||||||| |||||||| |||||||||    
T  17368 tgcaaaacaacattagccaacaacaacctacactcccccactaacacctccttccaatcctacaacctcatacgccact 17290  T

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Target: scaffold0062; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 410
Target Start/End: Complemental strand, 27536 - 27458
Alignment:
Q  332 tgcaaaacaacatgagacaacagcaacctacactcccgaaccaagtcttcctcccaatcccacaacctcctacgccact 410  Q
    ||||||||||||| || ||||| ||||||||||||||  || ||  | |||| ||||||| |||||||| |||||||||    
T  27536 tgcaaaacaacattagccaacaacaacctacactcccccactaacacctccttccaatcctacaacctcatacgccact 27458  T

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Target: scaffold0062; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 410
Target Start/End: Complemental strand, 37702 - 37624
Alignment:
Q  332 tgcaaaacaacatgagacaacagcaacctacactcccgaaccaagtcttcctcccaatcccacaacctcctacgccact 410  Q
    ||||||||||||| || ||||| ||||||||||||||  || ||  | |||| ||||||| |||||||| |||||||||    
T  37702 tgcaaaacaacattagccaacaacaacctacactcccccactaacacctccttccaatcctacaacctcatacgccact 37624  T

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