View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1355_1D_low_1 (Length: 782)
Name: NF1355_1D_low_1
Description: NF1355_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1355_1D_low_1 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 735; Significance: 0; HSPs: 43)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 735; E-Value: 0
Query Start/End: Original strand, 1 - 759
Target Start/End: Complemental strand, 35969497 - 35968739
Alignment:
| Q |
1 |
catctggtatgggaggaggttccaaacctgctttaaatgctttttgtaacttggtagcttctttacttgacttggcagcaactttctttaacatggcatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
35969497 |
catctggtatgggaggaggttccaaacctgctttaaatgctttttgtaacttggtagcttctttactcgacttggcagcaactttctttaacatggcatt |
35969398 |
T |
|
| Q |
101 |
cactacgcggggtaatcccagttgagtttgaagaggttccaattttatttccatcgacttcaagttacacaaagaagggagcccaacctctaataaatca |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||| |
|
|
| T |
35969397 |
cactacgcggggtaatcccagttgagtttgaagaggttccaattttatttccatcgacttcaagttacacaaagaatggagctcaacctctaatatatca |
35969298 |
T |
|
| Q |
201 |
ggaactaaggagagaatctaaacagtcaagaacgagagtgaaataagatcagttatgcaagtcaaccaattttaaacaaaattttgaaataacgtaaaga |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35969297 |
ggaactaaggagagaatctaaacagtcaagaacgagagtgaaataagatcagttatgcaagtcaaccaattttaaacaaaattttgaaataacgtaaaga |
35969198 |
T |
|
| Q |
301 |
atcttaacaagaaagtaaaattaatgcttcaaaacatgcctaggtacctgaagagtaattgaagagactatcaatgattttacattggcgaggtctagca |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35969197 |
atcttaacaagaaagtaaaattaatgcttcaaaacatgcctaggtacctgaagagtaattgaagagactatcaatgattttacattggcgaggtctagca |
35969098 |
T |
|
| Q |
401 |
gccagctcaatagaaccataggagactcctcaaaatttgaatgcatttttgcatcaatatttacttgtttaacagaagaaagaccgctcccacatatttt |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35969097 |
gccagctcaatagaaccataggagactcctcaaaatttgaatgcatttttgcatcaatatttacttgtttaacagaagaaagaccgctcccacatatttt |
35968998 |
T |
|
| Q |
501 |
ctgattaggaataccggtaatagtaaaggtgcaaagactaggagtggacaactcaatttgggaaaaattagatgaattatgatgcatggctaaatcgaca |
600 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
35968997 |
ctgattaggaataccggtaatagtaaaggtgcaaagactaggagtagacaactcaatttgggaaaaattagatgaattatgatgcatagctaaatcgaca |
35968898 |
T |
|
| Q |
601 |
agtgtctcacttgatatcttgaggatttgagcatcctctatcttacaaccgtaaaggaccaaactattcaacttagtaaaggcggaaaaggggtcaacac |
700 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35968897 |
agtgtctcacttgatatcttgaggatttgagcatcctctatcttacaaccgtaaaggaccaaactattcaacttagtaaaggcggaaaaggggtcaacac |
35968798 |
T |
|
| Q |
701 |
agccgtttttatcaccccaaaaggcgaaatttgttagatccaagctggtcaatgctggc |
759 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35968797 |
agccgtttttatcaccccaaaaggcgaaatttgttagatccaagctggtcaatgctggc |
35968739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 139 - 626
Target Start/End: Complemental strand, 28125851 - 28125361
Alignment:
| Q |
139 |
ccaattttatttccatcgacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaaacagtcaagaacgagag |
238 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||| | ||| | || || |
|
|
| T |
28125851 |
ccaattttatttccatcgacttcaagtaacacaaagaacggagcttaacctctagtaaatcaggaactaaggagagaatctaaacaatgaaggatgaaag |
28125752 |
T |
|
| Q |
239 |
tgaaataagatcagttatgcaagtcaaccaattttaa----acaaaattttgaaataacgtaaagaatcttaacaagaaagtaaaattaatgcttcaaaa |
334 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||| ||||| ||||||| | || ||||||||||||||||||||||||||| | | || |
|
|
| T |
28125751 |
tgaaataagatcagttatgcatgtcaattgattttaattaaacaaatacatgaaataccatacagaatcttaacaagaaagtaaaattaaagtcccggaa |
28125652 |
T |
|
| Q |
335 |
catgcctaggtacctgaagagtaattgaagagactatcaatgattttacattggcgaggtctagcagccagctcaatagaaccataggagactcctcaaa |
434 |
Q |
| |
|
|||||| | |||||||||||||| ||||||||| | ||||||| ||||| ||||| ||| |||||||||| |||||||||||||| |||| ||| || | |
|
|
| T |
28125651 |
catgccaatgtacctgaagagtagttgaagagaatgtcaatgactttactttggcaaggcctagcagccaactcaatagaaccattggaggctcgtccca |
28125552 |
T |
|
| Q |
435 |
atttgaatgcatttttgcatcaatatttacttgtttaacagaagaaagaccgctcccacatattttctgattaggaataccggtaatagtaaaggtgcaa |
534 |
Q |
| |
|
|| | |||| || | |||| |||||||||| ||||| ||||||||||||| ||| |||||||||||||||| |||||||||||||| |||||||| ||| |
|
|
| T |
28125551 |
atgtaaatgaatgtctgcagcaatatttacatgtttcacagaagaaagactgcttccacatattttctgatcaggaataccggtaaaagtaaaggaacaa |
28125452 |
T |
|
| Q |
535 |
agactaggagtggacaactcaatttgggaaaaattagatgaattatgatgcatggctaaatcgacaagtgtctcacttgatatcttgaggat |
626 |
Q |
| |
|
||||| ||| || ||||||||| || ||| | ||||||| || |||||| |||||| ||||||||||||| |||||||| || ||||| |
|
|
| T |
28125451 |
agactcggaccaga-tactcaattttggcaaagtcggatgaatcattatgcatagctaaaacgacaagtgtctcgcttgatatgtttaggat |
28125361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 139 - 626
Target Start/End: Complemental strand, 29677526 - 29677038
Alignment:
| Q |
139 |
ccaattttatttccatcgacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaaacagtcaagaacgagag |
238 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||| |||| | || || ||||| |
|
|
| T |
29677526 |
ccaatttaatttccatcgacttcaagttacacaaagagtggagcttaacctctggtaaatcaggaactaaggagagaatctgaacaatgaataatgagag |
29677427 |
T |
|
| Q |
239 |
tgaaataagatcagttatgcaagtcaaccaattttaaacaaaattttgaaataacgtaaagaatcttaacaagaaagtaaaattaatgcttcaaaacatg |
338 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||| | ||||||||| || ||||| |||||||||| |||||||||| | || |||||| |
|
|
| T |
29677426 |
tgaaataagatcagttatgcatatcaattgattttaaacagatacatgaaataacatacagaatattaacaagaaggtaaaattaaagtctcggaacatg |
29677327 |
T |
|
| Q |
339 |
cctaggtacctgaagagtaattgaagagactatcaatgattttacattggcgaggtctagcagccagctcaatagaaccataggagactcctcaaaattt |
438 |
Q |
| |
|
|| | |||||||||||||| ||||||||| | ||||||| ||||||||||| ||| || ||||||| |||||||||||||| |||| |||||| ||| |
|
|
| T |
29677326 |
ccaatgtacctgaagagtagttgaagagaatgtcaatgactttacattggcaaggccttgcagccaactcaatagaaccattggaggctcctcccaatgg |
29677227 |
T |
|
| Q |
439 |
gaatgcatttttgcatcaatatttacttgtttaacagaagaaagaccgctcccacatattttctgattaggaataccggtaatagtaaaggtgcaaagac |
538 |
Q |
| |
|
|||| || | |||| |||||||||| ||||| ||||||||||||||||| |||||||||| ||||| |||| |||| || | ||||| ||| ||||||| |
|
|
| T |
29677226 |
aaatgaatgtctgcagcaatatttacatgtttcacagaagaaagaccgcttccacatatttgctgatcaggactaccagtgaaagtaagggtacaaagac |
29677127 |
T |
|
| Q |
539 |
t-aggagtggacaactcaatttgggaaaaattagatgaattatgatgcatggctaaatcgacaagtgtctcacttgatatcttgaggat |
626 |
Q |
| |
|
| |||||| || |||||||||| | ||| | ||||| ||| |||| | |||||| |||||||||||| |||||||| || ||||| |
|
|
| T |
29677126 |
tcaggagtagataactcaatttttgcaaagtcggatgacttactatgcgtatctaaattgacaagtgtctcgcttgatatgtttaggat |
29677038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 1 - 739
Target Start/End: Original strand, 36635843 - 36636584
Alignment:
| Q |
1 |
catctggtatgggaggaggttccaaacctgctttaaatgctttttgtaacttggtagcttctttacttgacttggcagcaactttctttaacatggcat- |
99 |
Q |
| |
|
|||| ||||||||||| |||||||||| ||||||||| || ||| |||||||| ||||||||||| ||||||||||||| |||||||||||||||| | |
|
|
| T |
36635843 |
catcaggtatgggaggtggttccaaacgtgctttaaaagcctttcttaacttggcagcttctttacgtgacttggcagcagctttctttaacatggcttc |
36635942 |
T |
|
| Q |
100 |
--tcactacgcggggtaatcccagttgagtttgaagaggtt-ccaattttatttccatcgacttcaagttacacaaagaagggagcccaacctctaataa |
196 |
Q |
| |
|
|||| | | ||||||| ||| |||| || | ||||| ||| |||||||||||| ||||||||||||||||||||||| ||| |||||||| ||| |
|
|
| T |
36635943 |
tttcaccaggttgggtaatgccatttga-ttactacaggtttccagttttatttccatagacttcaagttacacaaagaaggcagcttaacctctagtaa |
36636041 |
T |
|
| Q |
197 |
atcaggaactaaggagagaatctaaacagtcaagaacgagagtgaaataagatcagttatgcaagtcaaccaattttaaacaaaattttgaaataacgta |
296 |
Q |
| |
|
|||||||||||| ||||||||||||||| | | ||| || |||||| || || ||||| ||||||| ||| ||||||| |||| |||||| | |
|
|
| T |
36636042 |
atcaggaactaatgagagaatctaaacaattaggaatgaaagtgaattagaatagcttatgaaagtcaagtgattctaaacaatatttaaaaataaaatg |
36636141 |
T |
|
| Q |
297 |
aagaatcttaacaagaaagtaaaattaatgcttcaaaacatgcctaggtacctgaagagtaattgaagagactatcaatgattttacattggcgaggtct |
396 |
Q |
| |
|
||||| || | |||| ||||| ||||| |||||||||||| | | |||| |||||||| |||||||||| |||||||||||||||||||| |||| | |
|
|
| T |
36636142 |
aagaacctcgataagagagtaatattaaagcttcaaaacattcaaacatacccgaagagtagttgaagagaccatcaatgattttacattggcaaggttt |
36636241 |
T |
|
| Q |
397 |
agcagccagctcaatagaaccataggagactcctcaaaatttgaatgcatttttgcatcaatatttacttgtttaacagaagaaagaccgctcccacata |
496 |
Q |
| |
|
||||||||| ||||||| || ||||| ||| || | ||||| ||||| ||| | ||| ||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
36636242 |
agcagccagtcgaatagaatcaaaggaggctcatcccatcttgaaaacatttctgctttaatctttacttgtttgacagaagaaagaccactcccacata |
36636341 |
T |
|
| Q |
497 |
ttttctgattaggaataccggtaatagtaaaggtgcaaagactaggagtggacaactcaatttgggaaaaattagatgaattatgatgcatggctaaatc |
596 |
Q |
| |
|
|||||||| |||| |||| |||| ||||||||| |||||||| |||| | |||||||||| | ||| | ||||| || | |||| |||| |
|
|
| T |
36636342 |
ttttctgaacaggagtaccagtaaaagtaaaggtacaaagacttggagcacataactcaatttttgcaaagtcttctgaataattacgcattttaaaatt |
36636441 |
T |
|
| Q |
597 |
gacaagtgtctcacttgatatcttgaggatttgagcatcctctatcttacaaccgtaaaggaccaaactattcaacttagtaaaggcggaaaaggggtca |
696 |
Q |
| |
|
|||||| || |||||||||||| |||||||||| |||||| || | |||||| || |||||||||| ||||||| | |||||| ||||||| ||| |
|
|
| T |
36636442 |
gacaagggtttcacttgatatcctgaggatttgtgcatcccttaccctacaactacgaatgaccaaactagtcaacttgggaaaggccaaaaagggctca |
36636541 |
T |
|
| Q |
697 |
acacagccgtttttatcaccccaaaaggcgaaatttgttagat |
739 |
Q |
| |
|
|||| || |||| | |||| |||||| |||||||||||||| |
|
|
| T |
36636542 |
gcacaaccattttcaccaccgcaaaagttgaaatttgttagat |
36636584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 135 - 701
Target Start/End: Original strand, 36612402 - 36612972
Alignment:
| Q |
135 |
ggttccaattttatttccatcgacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaaacagtcaagaacg |
234 |
Q |
| |
|
||||||||||||||||| || ||||| ||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||| || | ||| | |
|
|
| T |
36612402 |
ggttccaattttatttctatagactttaagttgcacaaagaagggagcttaacctctaataaatcaggaattaaggagagaatctaagcaacaaggaatg |
36612501 |
T |
|
| Q |
235 |
agagtgaaataagatcagttatgcaagtcaaccaattttaaacaaaattttgaaataacgtaaagaatct---taacaagaaagtaaaat-taatgcttc |
330 |
Q |
| |
|
|| |||| || ||||| ||| ||||||||| |||||| |||||||||| || |||| |||||||||| ||| ||||||||||||| || | | |
|
|
| T |
36612502 |
aggatgaattaggatcatttaggcaagtcaattaatttttaacaaaatttagacataaaataaagaatcttaataagaagaaagtaaaataaaaaacctg |
36612601 |
T |
|
| Q |
331 |
aaaacatgcctaggtacctgaagagtaattgaagagactatcaatgattttacattggcgaggtctagcagccagctcaatagaaccataggagactcct |
430 |
Q |
| |
|
|||||||| | | |||||||||||||| ||||||| ||| ||||||||||||||| ||| || ||| ||||||| || | ||||| ||||| || || | |
|
|
| T |
36612602 |
aaaacatgacaaagtacctgaagagtagttgaagaaactgtcaatgattttacatcggcaagatcttgcagccaactgagtagaagcatagcaggctttt |
36612701 |
T |
|
| Q |
431 |
caaaatttgaatgcatttttgcatcaatatttacttgtttaacagaagaaagaccgctcccacatattttctgattaggaataccggtaatagtaaaggt |
530 |
Q |
| |
|
| || ||| |||| |||| ||||||||||| ||||||||||||||||||| |||||||||||| |||||| |||| ||||||| ||||||||| |
|
|
| T |
36612702 |
cccaacaaaaatatatttctgcagcaatatttactagtttaacagaagaaagaccactcccacatattctctgatcaggatgaccggtataagtaaaggt |
36612801 |
T |
|
| Q |
531 |
gcaaagactaggagtggacaactcaatttgggaaaaattagatgaattatgatgcatggctaaatcgacaagtgtctcacttgatatcttgaggatttga |
630 |
Q |
| |
|
|||||||| |||| | |||| ||||| | ||| | | ||||| | | |||||| ||||||| || |||||||| ||||||||| ||||| |||| |
|
|
| T |
36612802 |
acaaagactctgagtaaataactgaattttgtcaaagtcatatgaactttcatgcatagctaaatttactagtgtctcgcttgatatcctgagggtttgt |
36612901 |
T |
|
| Q |
631 |
gcatcctctatcttacaaccgtaaaggaccaaactattcaacttagtaaaggcggaaaaggggtcaacaca |
701 |
Q |
| |
|
|||||| || ||| | | || |||||||||||||||||| |||||||||||| |||| |||||||| |
|
|
| T |
36612902 |
gcatccctaattgcacatctatcaatgaccaaactattcaacttggtaaaggcggaagagggttcaacaca |
36612972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 301 - 752
Target Start/End: Complemental strand, 36910436 - 36909985
Alignment:
| Q |
301 |
atcttaacaagaaagtaaaattaatgcttcaaaacatgcctaggtacctgaagagtaattgaagagactatcaatgattttacattggcgaggtctagca |
400 |
Q |
| |
|
||||||| |||||||||||| ||| |||| |||||||| | |||||||||||||||| |||||| |||| |||||||| ||||||||| |||||| ||| |
|
|
| T |
36910436 |
atcttaagaagaaagtaaaaataaagcttgaaaacatgacaaggtacctgaagagtagttgaagtgactgccaatgattctacattggcaaggtcttgca |
36910337 |
T |
|
| Q |
401 |
gccagctcaatagaaccataggagactcctcaaaatttgaatgcat-ttttgcatcaatatttacttgtttaacagaagaaagaccgctcccacatattt |
499 |
Q |
| |
|
|| |||| ||||||||||||| ||| ||||| ||| | || | | || |||||| |||||||||||||||| |||||| |||| ||||||| |||||| |
|
|
| T |
36910336 |
gcaagcttaatagaaccatagcagaatcctccgaatat-aacacttcttgtgcatcgatatttacttgtttaatagaagagagactgctcccatatattt |
36910238 |
T |
|
| Q |
500 |
tctgattaggaataccggtaatagtaaaggtgcaaagactaggagtggacaactcaatttgggaaaaattagatgaattatgatgcatggctaaatcgac |
599 |
Q |
| |
|
||||| | | |||||||| ||||||||| |||||||| |||| || |||| | || | ||| | | | |||||| |||| |||||||| ||| |
|
|
| T |
36910237 |
tctgaagaaggtcaccggtaaaagtaaaggtacaaagacttggagcagataacttgaatttgacaaagtcaagtaaattatcgtgcagggctaaattgac |
36910138 |
T |
|
| Q |
600 |
aagtgtctcacttgatatcttgaggatttgagcatcctctatcttacaaccgtaaaggaccaaactattcaacttagtaaaggcggaaaaggggtcaaca |
699 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| || || ||| | || |||||||||||||||||| ||||||||| ||||||| ||| || |
|
|
| T |
36910137 |
aagtgtctcacttgatatgttgaggatttgagcatcctttacctcacagctactaatgaccaaactattcaacttggtaaaggcgaaaaagggctcagca |
36910038 |
T |
|
| Q |
700 |
cagccgtttttatcaccccaaaaggcgaaatttgttagatccaagctggtcaa |
752 |
Q |
| |
|
|| ||||||| | ||| |||||||| || ||| ||||| |||| ||||||| |
|
|
| T |
36910037 |
caaccgttttcactaccgcaaaaggcaaagttttctagatacaaggtggtcaa |
36909985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 24 - 501
Target Start/End: Original strand, 55965765 - 55966248
Alignment:
| Q |
24 |
aaacctgctttaaatgctttttgtaacttggtagcttctttacttgacttggcagcaactttctttaacatggcat---tcactacgcggggtaatccca |
120 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||||||| | |||| ||||||| |||||||||||||||| | ||| || | |||||||| ||| |
|
|
| T |
55965765 |
aaacccgcttcaaatgctttttgtaacttggtagcttcttcgcaagactcggcagcatctttctttaacatggcttctttcattaagtggggtaattcca |
55965864 |
T |
|
| Q |
121 |
gttgagtttgaagaggttccaattttatttccatcgacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatcta |
220 |
Q |
| |
|
| | || | | |||||||||| ||||||| |||||||||||||||||||||||||||| | ||| ||||||| |||||||||||||||||||| |
|
|
| T |
55965865 |
tatcatctttaggtggttccaattctatttccgtcgacttcaagttacacaaagaagggagtttgagctccaataaattgggaactaaggagagaatcta |
55965964 |
T |
|
| Q |
221 |
aacagtcaagaacgagagtgaaataagatcagttatgcaagtcaaccaattttaaacaaaattttg---aaataacgtaaagaatcttaacaagaaagta |
317 |
Q |
| |
|
| || | | ||| || ||||| || || |||||||| ||||||| |||| ||| |||| | | |||||| ||||||||| ||| | ||| ||| |
|
|
| T |
55965965 |
agcaataaggaataagggtgaattaggaccagttatgtaagtcaattgatttgaaaaaaaaaatggtagaaataaaataaagaatcctaagatgaatgta |
55966064 |
T |
|
| Q |
318 |
aaattaatgcttcaaaacatgcctaggtacctgaagagtaattgaagagactatcaatgattttacattggcgaggtctagcagccagctcaatagaacc |
417 |
Q |
| |
|
||||| | || | || |||||| ||||||||||||||| || |||||||| |||||||| ||||| | || ||||||||||||||||||||||||||| |
|
|
| T |
55966065 |
aaattgaagcataaattcatgccaaggtacctgaagagttgttaaagagactttcaatgatcttacactagcaaggtctagcagccagctcaatagaacc |
55966164 |
T |
|
| Q |
418 |
ataggagactcctcaaaatttgaatgcatttttgcatcaatatttacttgtttaacagaagaaagaccgctcccacatattttc |
501 |
Q |
| |
|
||||||| || | | ||| || | | |||| ||||||||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
55966165 |
ataggaggcttcacccaatcataaatcgctcgtgcaccaatatttacttgtttaacagaagaaagagcactcccacatattttc |
55966248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 348 - 626
Target Start/End: Original strand, 20211127 - 20211405
Alignment:
| Q |
348 |
ctgaagagtaattgaagagactatcaatgattttacattggcgaggtctagcagccagctcaatagaaccataggagactcctcaaaatttgaatgcatt |
447 |
Q |
| |
|
|||||||||| ||||||||| | ||||||| ||||||||||| ||| |||||| ||| ||||||||||||| |||| ||| || ||| | |||| || |
|
|
| T |
20211127 |
ctgaagagtatttgaagagaatgtcaatgactttacattggcaaggcctagcaaccaaatcaatagaaccattggaggctcgtcccaatgtaaatgaatg |
20211226 |
T |
|
| Q |
448 |
tttgcatcaatatttacttgtttaacagaagaaagaccgctcccacatattttctgattaggaataccggtaatagtaaaggtgcaaagactaggagtgg |
547 |
Q |
| |
|
|||||| |||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||| |||||||| ||| | |
|
|
| T |
20211227 |
tttgcagcaatatttacatgtttcacagaagaaagaccgcttccacatattttctgatcaggaataccggtaaaagtaaaggtacaaagactcggaccag |
20211326 |
T |
|
| Q |
548 |
acaactcaatttgggaaaaattagatgaattatgatgcatggctaaatcgacaagtgtctcacttgatatcttgaggat |
626 |
Q |
| |
|
| |||||||||| || ||| | ||||||| || |||||| |||||| ||||||||||| |||||||| || ||||| |
|
|
| T |
20211327 |
ataactcaattttggcaaagtcggatgaatcattatgcatagctaaaatgacaagtgtcttgcttgatatatttaggat |
20211405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 270 - 545
Target Start/End: Original strand, 36627383 - 36627658
Alignment:
| Q |
270 |
ttttaaacaaaattttgaaataacgtaaagaatcttaacaagaaagtaaaattaatgcttcaaaacatgcctaggtacctgaagagtaattgaagagact |
369 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||| || | |||||||| | ||||||||| |||||| |||| || || |
|
|
| T |
36627383 |
ttttaaacaaaatttagaaataaaataaagaatcttaagaagaaagaaaaattaaagccttaaaacatgacaaggtacctgcagagtagttgaggaaaca |
36627482 |
T |
|
| Q |
370 |
atcaatgattttacattggcgaggtctagcagccagctcaatagaaccataggagactcctcaaaatttgaatgcatttttgcatcaatatttacttgtt |
469 |
Q |
| |
|
||||||||||||||||||| | ||| |||||||| | |||||||||||||||| | || |||||| |||| |||| ||||||||||||||| |
|
|
| T |
36627483 |
atcaatgattttacattggtaaattctcgcagccagttaaatagaaccataggagctttatccccgattgaatacattactgcagcaatatttacttgtt |
36627582 |
T |
|
| Q |
470 |
taacagaagaaagaccgctcccacatattttctgattaggaataccggtaatagtaaaggtgcaaagactaggagt |
545 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| ||| |||||||||| ||||||| |||||||| ||||| |
|
|
| T |
36627583 |
taacagaagaaagaccgctcccacatattttatgaaaaggtataccggtaaacttaaaggtacaaagacttggagt |
36627658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 457 - 753
Target Start/End: Complemental strand, 18364930 - 18364634
Alignment:
| Q |
457 |
atatttacttgtttaacagaagaaagaccgctcccacatattttctgattaggaataccggtaatagtaaaggtgcaaagactaggagtggacaactcaa |
556 |
Q |
| |
|
||||||| || |||||||||| |||||| ||||||||||||||||||| | | ||||||| || ||||||||| |||||||||||| || ||||| | |
|
|
| T |
18364930 |
atatttatttttttaacagaaaaaagactgctcccacatattttctgaacaagcataccggaaaaagtaaaggtacaaagactaggaacagataactcga |
18364831 |
T |
|
| Q |
557 |
tttgggaaaaattagatgaattatgatgcatggctaaatcgacaagtgtctcacttgatatcttgaggatttgagcatcctctatcttacaaccgtaaag |
656 |
Q |
| |
|
||| || || | || ||| || |||||| || |||| ||||||||||||||||||||| |||| ||||||||||| | || ||||||||| ||| |
|
|
| T |
18364830 |
ttttggcaattcttgaagaacaataatgcatcgcaaaattgacaagtgtctcacttgatatgctgagaatttgagcatcttttaccttacaaccagaaat |
18364731 |
T |
|
| Q |
657 |
gaccaaactattcaacttagtaaaggcggaaaaggggtcaacacagccgtttttatcaccccaaaaggcgaaatttgttagatccaagctggtcaat |
753 |
Q |
| |
|
||||||||||||||||| | ||||||||||||||| ||| |||| ||||||| | |||| ||||||| |||| || |||||| ||| |||||||| |
|
|
| T |
18364730 |
aaccaaactattcaacttgggaaaggcggaaaagggctcagcacaaccgttttcaccaccgcaaaaggaaaaatgtgatagatctaagttggtcaat |
18364634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 457 - 753
Target Start/End: Original strand, 36597995 - 36598291
Alignment:
| Q |
457 |
atatttacttgtttaacagaagaaagaccgctcccacatattttctgattaggaataccggtaatagtaaaggtgcaaagactaggagtggacaactcaa |
556 |
Q |
| |
|
||||||| || |||||||||| |||||| ||||||||||||||||||| | | ||||||| || ||||||||| |||||||||||| || ||||| | |
|
|
| T |
36597995 |
atatttatttttttaacagaaaaaagactgctcccacatattttctgaacaagcataccggaaaaagtaaaggtacaaagactaggaacagataactcga |
36598094 |
T |
|
| Q |
557 |
tttgggaaaaattagatgaattatgatgcatggctaaatcgacaagtgtctcacttgatatcttgaggatttgagcatcctctatcttacaaccgtaaag |
656 |
Q |
| |
|
||| || || | || ||| || |||||| || |||| ||||||||||||||||||||| |||| ||||||||||| | || ||||||||| ||| |
|
|
| T |
36598095 |
ttttggcaattcttgaagaacaataatgcatcgcaaaattgacaagtgtctcacttgatatgctgagaatttgagcatcttttaccttacaaccagaaat |
36598194 |
T |
|
| Q |
657 |
gaccaaactattcaacttagtaaaggcggaaaaggggtcaacacagccgtttttatcaccccaaaaggcgaaatttgttagatccaagctggtcaat |
753 |
Q |
| |
|
||||||||||||||||| | ||||||||||||||| ||| |||| ||||||| | |||| ||||||| |||| || |||||| ||| |||||||| |
|
|
| T |
36598195 |
aaccaaactattcaacttgggaaaggcggaaaagggctcagcacaaccgttttcaccaccgcaaaaggaaaaatgtgatagatctaagttggtcaat |
36598291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 36627119 - 36627342
Alignment:
| Q |
1 |
catctggtatgggaggaggttccaaacctgctttaaatgctttttgtaacttggtagcttctttacttgacttggcagcaactttctttaacatggcat- |
99 |
Q |
| |
|
|||| ||||||| ||| |||| | |||||||||||||||||||| ||| ||| | ||||||||||| ||| ||||| | || ||||||||||||||| |
|
|
| T |
36627119 |
catcaggtatggaaggtggtttccaacctgctttaaatgcttttcgtacctttgcagcttctttacgtgatgtggcaatagctctctttaacatggcatc |
36627218 |
T |
|
| Q |
100 |
--tcactacgcggggtaatcccagttgagtttgaagaggttccaattttatttccatcgacttcaagttacacaaagaagggagcccaacctctaataaa |
197 |
Q |
| |
|
||| || | ||||||||| || ||| || | |||||||||||||||||||| ||||||||||||| |||||||||||| ||||||| |||||| |
|
|
| T |
36627219 |
tttcaatatgaagggtaatcctagctgaacttcgattggttccaattttatttccattgacttcaagttaccgaaagaagggagctcaacctccaataaa |
36627318 |
T |
|
| Q |
198 |
tcaggaactaaggagagaatctaa |
221 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
36627319 |
tcaggaactaaggagagaatctaa |
36627342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 589 - 753
Target Start/End: Original strand, 36665400 - 36665564
Alignment:
| Q |
589 |
gctaaatcgacaagtgtctcacttgatatcttgaggatttgagcatcctctatcttacaaccgtaaaggaccaaactattcaacttagtaaaggcggaaa |
688 |
Q |
| |
|
||||||| | ||||||| ||||||||||| |||||||||||||||||| || |||||||| |||| |||||||||||||| | |||||| |||||| |
|
|
| T |
36665400 |
gctaaattggcaagtgtatcacttgatatggtgaggatttgagcatcctttaccttacaactactaagggccaaactattcaacatggtaaagacggaaa |
36665499 |
T |
|
| Q |
689 |
aggggtcaacacagccgtttttatcaccccaaaaggcgaaatttgttagatccaagctggtcaat |
753 |
Q |
| |
|
|||| ||| |||| ||| ||| | |||| || |||||||||||||||| ||| |||||||||||| |
|
|
| T |
36665500 |
agggctcagcacaaccgctttcaccaccgcagaaggcgaaatttgttatatctaagctggtcaat |
36665564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 18361199 - 18360931
Alignment:
| Q |
1 |
catctggtatgggaggaggttccaaacctgctttaaatgctttttgtaacttggtagcttctttacttgacttggcagcaactttctttaacatggcat- |
99 |
Q |
| |
|
|||| |||||||||| |||| ||||| ||||| |||||| ||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
18361199 |
catcaggtatgggagatggtttcaaacttgcttcaaatgcctttcctaacttagcagcttctttacgtgacttggcagcaactttctttaacatggcatc |
18361100 |
T |
|
| Q |
100 |
--tcactacgcggggtaatcccagttgagtttgaagaggttccaattttatttccatcgacttcaagttacacaaagaagggagc---ccaacctctaat |
194 |
Q |
| |
|
|||||| | ||||||||||| ||| | | | |||||| ||||||||| | |||||||||||||||||||||| ||| |||||||| | |
|
|
| T |
18361099 |
gctcactatgttgggtaatccca-ttggatgctaggtagttccagttttatttctgtagacttcaagttacacaaagaagatagcttaataacctctagt |
18361001 |
T |
|
| Q |
195 |
aaatcaggaactaaggagagaatctaaacagtcaagaacgagagtgaaataagatcagttatgcaagtca |
264 |
Q |
| |
|
|||| ||||||||||||||| ||||||| | | | || ||||||||| || ||| |||||||||||||| |
|
|
| T |
18361000 |
aaataaggaactaaggagagtatctaaagaatgaggattgagagtgaattaggataagttatgcaagtca |
18360931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 36601730 - 36601998
Alignment:
| Q |
1 |
catctggtatgggaggaggttccaaacctgctttaaatgctttttgtaacttggtagcttctttacttgacttggcagcaactttctttaacatggcat- |
99 |
Q |
| |
|
|||| |||||||||| |||| ||||| ||||| |||||| ||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
36601730 |
catcaggtatgggagatggtttcaaacttgcttcaaatgcctttcctaacttagcagcttctttacgtgacttggcagcaactttctttaacatggcatc |
36601829 |
T |
|
| Q |
100 |
--tcactacgcggggtaatcccagttgagtttgaagaggttccaattttatttccatcgacttcaagttacacaaagaagggagc---ccaacctctaat |
194 |
Q |
| |
|
|||||| | ||||||||||| ||| | | | |||||| ||||||||| | |||||||||||||||||||||| ||| |||||||| | |
|
|
| T |
36601830 |
gctcactatgttgggtaatccca-ttggatgctaggtagttccagttttatttctgtagacttcaagttacacaaagaagatagcttaataacctctagt |
36601928 |
T |
|
| Q |
195 |
aaatcaggaactaaggagagaatctaaacagtcaagaacgagagtgaaataagatcagttatgcaagtca |
264 |
Q |
| |
|
|||| ||||||||||||||| ||||||| | | | || ||||||||| || ||| |||||||||||||| |
|
|
| T |
36601929 |
aaataaggaactaaggagagtatctaaagaatgaggattgagagtgaattaggataagttatgcaagtca |
36601998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 589 - 752
Target Start/End: Original strand, 36643123 - 36643286
Alignment:
| Q |
589 |
gctaaatcgacaagtgtctcacttgatatcttgaggatttgagcatcctctatcttacaaccgtaaaggaccaaactattcaacttagtaaaggcggaaa |
688 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| || | |||||||||||||||| | |||||| ||| |
|
|
| T |
36643123 |
gctaaattgacaagtgtctcacttgatatgttgaggatttgagcatcctttatcttacaacaacgaatgcccaaactattcaactttggaaaggccaaaa |
36643222 |
T |
|
| Q |
689 |
aggggtcaacacagccgtttttatcaccccaaaaggcgaaatttgttagatccaagctggtcaa |
752 |
Q |
| |
|
|||| ||| |||| ||| ||| | |||| |||||| | ||||||| || ||| ||| ||||||| |
|
|
| T |
36643223 |
agggatcagcacaaccgctttcaccaccgcaaaagactaaatttgctaaatctaagttggtcaa |
36643286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 418
Target Start/End: Complemental strand, 18365107 - 18364990
Alignment:
| Q |
301 |
atcttaacaagaaagtaaaattaatgcttcaaaacatgcctaggtacctgaagagtaattgaagagactatcaatgattttacattggcgaggtctagca |
400 |
Q |
| |
|
||||||| |||||||||||| || | || |||||||| | ||| |||||||||||| |||||| |||| |||||||| ||||||||| |||||| ||| |
|
|
| T |
18365107 |
atcttaagaagaaagtaaaaacaaaggtttaaaacatgacaaggaacctgaagagtagttgaagtgactgccaatgattctacattggcaaggtcttgca |
18365008 |
T |
|
| Q |
401 |
gccagctcaatagaacca |
418 |
Q |
| |
|
||||||| |||||||||| |
|
|
| T |
18365007 |
gccagcttaatagaacca |
18364990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 418
Target Start/End: Original strand, 36597818 - 36597935
Alignment:
| Q |
301 |
atcttaacaagaaagtaaaattaatgcttcaaaacatgcctaggtacctgaagagtaattgaagagactatcaatgattttacattggcgaggtctagca |
400 |
Q |
| |
|
||||||| |||||||||||| || | || |||||||| | ||| |||||||||||| |||||| |||| |||||||| ||||||||| |||||| ||| |
|
|
| T |
36597818 |
atcttaagaagaaagtaaaaacaaaggtttaaaacatgacaaggaacctgaagagtagttgaagtgactgccaatgattctacattggcaaggtcttgca |
36597917 |
T |
|
| Q |
401 |
gccagctcaatagaacca |
418 |
Q |
| |
|
||||||| |||||||||| |
|
|
| T |
36597918 |
gccagcttaatagaacca |
36597935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 43942030 - 43941954
Alignment:
| Q |
128 |
ttgaagaggttccaattttatttccatcgacttcaagttacacaaagaagggagcccaacctctaataaatcaggaa |
204 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||| |||||| |
|
|
| T |
43942030 |
ttgaagtggttccaattttatttccatagactttaagttacacaaagaagggagcttaacttctaataaaccaggaa |
43941954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 597 - 732
Target Start/End: Complemental strand, 36629907 - 36629772
Alignment:
| Q |
597 |
gacaagtgtctcacttgatatcttgaggatttgagcatcctctatcttacaaccgtaaaggaccaaactattcaacttagtaaaggcggaaaaggggtca |
696 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||| || || ||||| ||||| ||||||||||||||| ||||||| |||||||| ||| |
|
|
| T |
36629907 |
gacaagggtctcacttgatatgctgaggatttgagcatcctttacctcacaactacgaaggatcaaactattcaactttgtaaaggtcgaaaagggctca |
36629808 |
T |
|
| Q |
697 |
acacagccgtttttatcaccccaaaaggcgaaattt |
732 |
Q |
| |
|
|||| ||||||| | | || |||||||| |||||| |
|
|
| T |
36629807 |
gcacaaccgttttcaccgccgcaaaaggcaaaattt |
36629772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 315 - 617
Target Start/End: Complemental strand, 18083928 - 18083626
Alignment:
| Q |
315 |
gtaaaattaatgcttcaaaacatgcctaggtacctgaagagtaattgaagagactatcaatgattttacattggcgaggtctagcagccagctcaataga |
414 |
Q |
| |
|
|||||||||| | ||||| |||||| ||||||||| |||||||||||||||||| |||||||||||||| || ||| |||||||| | |||||| |
|
|
| T |
18083928 |
gtaaaattaaagtctcaaatcatgccaaggtacctggagagtaattgaagagactttcaatgattttacagctaaaagctcttgcagccagttgaataga |
18083829 |
T |
|
| Q |
415 |
accataggagactcctcaaaatttgaatgcatttttgcatcaatatttacttgtttaacagaagaaagaccgctcccacatattttctgattaggaatac |
514 |
Q |
| |
|
||||||||| || ||| ||| || | ||| ||||| ||| || |||| |||||||||||||||| ||| | |||||||| ||| ||||| | |
|
|
| T |
18083828 |
accataggaagcttctccaaagatgtgtccatgcgtgcataaattttgacttctttaacagaagaaagattgcttctgcatattttgggatgtggaatcc |
18083729 |
T |
|
| Q |
515 |
cggtaatagtaaaggtgcaaagactaggagtggacaactcaatttgggaaaaattagatgaattatgatgcatggctaaatcgacaagtgtctcacttga |
614 |
Q |
| |
|
|| || ||||||||| || || || |||||||| | |||||||| || || |||| |||| ||| | |||| || |||| ||||||||| |||||||| |
|
|
| T |
18083728 |
cgtaaaaagtaaaggtacagaggcttggagtggatagctcaattttggcaattttaggtgaactataaagcatagcaaaattgacaagtgtttcacttga |
18083629 |
T |
|
| Q |
615 |
tat |
617 |
Q |
| |
|
||| |
|
|
| T |
18083628 |
tat |
18083626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 315 - 617
Target Start/End: Original strand, 36616752 - 36617054
Alignment:
| Q |
315 |
gtaaaattaatgcttcaaaacatgcctaggtacctgaagagtaattgaagagactatcaatgattttacattggcgaggtctagcagccagctcaataga |
414 |
Q |
| |
|
|||||||||| | ||||| |||||| ||||||||| |||||||||||||||||| |||||||||||||| || ||| |||||||| | |||||| |
|
|
| T |
36616752 |
gtaaaattaaagtctcaaatcatgccaaggtacctggagagtaattgaagagactttcaatgattttacagctaaaagctcttgcagccagttgaataga |
36616851 |
T |
|
| Q |
415 |
accataggagactcctcaaaatttgaatgcatttttgcatcaatatttacttgtttaacagaagaaagaccgctcccacatattttctgattaggaatac |
514 |
Q |
| |
|
||||||||| || ||| ||| || | ||| ||||| ||| || |||| |||||||||||||||| ||| | |||||||| ||| ||||| | |
|
|
| T |
36616852 |
accataggaagcttctccaaagatgtgtccatgcgtgcataaattttgacttctttaacagaagaaagattgcttctgcatattttgggatgtggaatcc |
36616951 |
T |
|
| Q |
515 |
cggtaatagtaaaggtgcaaagactaggagtggacaactcaatttgggaaaaattagatgaattatgatgcatggctaaatcgacaagtgtctcacttga |
614 |
Q |
| |
|
|| || ||||||||| || || || |||||||| | |||||||| || || |||| |||| ||| | |||| || |||| ||||||||| |||||||| |
|
|
| T |
36616952 |
cgtaaaaagtaaaggtacagaggcttggagtggatagctcaattttggcaattttaggtgaactataaagcatagcaaaattgacaagtgtttcacttga |
36617051 |
T |
|
| Q |
615 |
tat |
617 |
Q |
| |
|
||| |
|
|
| T |
36617052 |
tat |
36617054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 36664919 - 36665001
Alignment:
| Q |
139 |
ccaattttatttccatcgacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaa |
221 |
Q |
| |
|
|||||| || ||||| |||||||||||||| || ||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
36664919 |
ccaattctacttccaatgacttcaagttacataacgaagggagcttaacctccaataaatcaggaactaaggagagaatctaa |
36665001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 36616590 - 36616667
Alignment:
| Q |
144 |
tttatttccatcgacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaa |
221 |
Q |
| |
|
|||||||||| | ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||| ||||||||| |
|
|
| T |
36616590 |
tttatttccaccaacttcaagttacataaagaagggagcttaacctccaatagatcaggaactaaggacagaatctaa |
36616667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 457 - 622
Target Start/End: Original strand, 38862637 - 38862804
Alignment:
| Q |
457 |
atatttacttgtttaacagaagaaagaccgctcc--cacatattttctgattaggaataccggtaatagtaaaggtgcaaagactaggagtggacaactc |
554 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||| |||||||| | ||||||||| ||||| ||| ||||||||| || ||||| ||||| || | ||| |
|
|
| T |
38862637 |
atatttactcgtttaacagaagaaagaccactcccacacatattatatgattaggactaccgctaaaagtaaaggtacatagacttggagtagatagctc |
38862736 |
T |
|
| Q |
555 |
aatttgggaaaaattagatgaattatgatgcatggctaaatcgacaagtgtctcacttgatatcttga |
622 |
Q |
| |
|
||||| ||| || ||||||||| ||||| ||||||| ||||||| ||||||||||| |||| |
|
|
| T |
38862737 |
aattttctcaaatttgaatgaattattgtgcatagctaaattgacaagttgttcacttgatatgttga |
38862804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 18084094 - 18084012
Alignment:
| Q |
139 |
ccaattttatttccatcgacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaa |
221 |
Q |
| |
|
|||||| || ||||| |||||||||||||| || ||||||||| |||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
18084094 |
ccaattctacttccaatgacttcaagttacataacgaagggagcttaacctccaataaatcaggaactaaggacagaatctaa |
18084012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 36630351 - 36630273
Alignment:
| Q |
143 |
ttttatttccatcgacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaa |
221 |
Q |
| |
|
||||| ||||| ||| |||||||||| |||||||||||| |||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
36630351 |
ttttacttccaatgacctcaagttacaaaaagaagggagcttaacctccaataaatcaggaaccaaggagagaatctaa |
36630273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 18365243 - 18365178
Alignment:
| Q |
156 |
gacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaa |
221 |
Q |
| |
|
|||||||||||||||||||||| || | |||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
18365243 |
gacttcaagttacacaaagaagtgaacttaacctccaataaatcaggaacaaaggagagaatctaa |
18365178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 36597682 - 36597747
Alignment:
| Q |
156 |
gacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaa |
221 |
Q |
| |
|
|||||||||||||||||||||| || | |||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
36597682 |
gacttcaagttacacaaagaagtgaacttaacctccaataaatcaggaacaaaggagagaatctaa |
36597747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 452 - 545
Target Start/End: Original strand, 36642953 - 36643046
Alignment:
| Q |
452 |
catcaatatttacttgtttaacagaagaaagaccgctcccacatattttctgattaggaataccggtaatagtaaaggtgcaaagactaggagt |
545 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||||| |||||||| ||| || || |||| ||| |||||| || |||||||| ||||| |
|
|
| T |
36642953 |
catcaatatttacttgtttaacagaggaaagtccgctcccgcatattttttgaataagactaccaataaaagtaaatgtacaaagacttggagt |
36643046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 127 - 363
Target Start/End: Original strand, 36655955 - 36656190
Alignment:
| Q |
127 |
tttgaagaggttccaattttatttccatcgacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaaacagt |
226 |
Q |
| |
|
||||||| | ||||| || |||||||| ||||||||||||||||||||||| | | || || ||||||| |||||||||||||||||||| || | | |
|
|
| T |
36655955 |
tttgaagtgattccagttctatttccagtgacttcaagttacacaaagaaggtatcttaaacttcaataaattaggaactaaggagagaatctgaa-aat |
36656053 |
T |
|
| Q |
227 |
caagaacgagagtgaaataagatcagttatgcaagtcaaccaattttaaacaaaattttgaaataacgtaaagaatcttaacaagaaagtaaaattaatg |
326 |
Q |
| |
|
| ||| |||||| || || | | |||||||||| |||| ||||||||||||||| ||||||| || ||| | | ||| ||||||||||| | |
|
|
| T |
36656054 |
gaggaatgagagtaaattacggtaagttatgcaattcaattgattttaaacaaaattaagaaataaaagaagaaatttctagcagatagtaaaattaaag |
36656153 |
T |
|
| Q |
327 |
cttcaaaacatgcctaggtacctgaagagtaattgaa |
363 |
Q |
| |
|
| | ||||||||| |||||||||||||||| ||||| |
|
|
| T |
36656154 |
ccttaaaacatgcaaaggtacctgaagagtacttgaa |
36656190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 36642508 - 36642601
Alignment:
| Q |
6 |
ggtatgggaggaggttccaaacctgctttaaatgctttttgtaacttggtagcttctttacttgacttggcagcaactttctttaacatggcat |
99 |
Q |
| |
|
||||||| ||| |||||||||| |||||||||| ||| |||||| | | |||||||||||||| |||||||| |||||||||||| ||||| |
|
|
| T |
36642508 |
ggtatggcaggtggttccaaacgagctttaaatgtctttcttaacttagcaacttctttacttgacatggcagcatctttctttaacaaggcat |
36642601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 36664792 - 36664872
Alignment:
| Q |
18 |
ggttccaaacctgctttaaatgctttttgtaacttggtagcttctttacttgacttggcagcaactttctttaacatggca |
98 |
Q |
| |
|
|||||||||| |||||| ||||| ||| |||||| | | ||||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
36664792 |
ggttccaaacgtgctttgaatgcctttcttaacttagcaacttctttacgagacttggcagcagctttctttaacatggca |
36664872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 36630470 - 36630399
Alignment:
| Q |
24 |
aaacctgctttaaatgctttttgtaacttggtagcttctttacttgacttggcagcaactttctttaacatg |
95 |
Q |
| |
|
|||||||||||||| || ||| |||||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
36630470 |
aaacctgctttaaacgcctttcttaacttatcggcttctttacttgacttagcagcaactttctttaacatg |
36630399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 462 - 504
Target Start/End: Original strand, 36665240 - 36665282
Alignment:
| Q |
462 |
tacttgtttaacagaagaaagaccgctcccacatattttctga |
504 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
36665240 |
tacttgtttaacagaagaaagtccgctcccacatatttcctga |
36665282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 36910577 - 36910512
Alignment:
| Q |
156 |
gacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaa |
221 |
Q |
| |
|
|||||||||||||| |||||| ||| |||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
36910577 |
gacttcaagttacataaagaatggaatttaacctccaataaatcaggaactaaggacagaatctaa |
36910512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 543
Target Start/End: Complemental strand, 36630035 - 36629952
Alignment:
| Q |
460 |
tttacttgtttaacagaagaaagaccgctcccacatattttctgattaggaataccggtaatagtaaaggtgcaaagactagga |
543 |
Q |
| |
|
||||||||||||| |||||| |||| ||||||||| ||||||||| || | |||||||| ||| ||||| |||||||| ||| |
|
|
| T |
36630035 |
tttacttgtttaatagaagagagactgctcccacaaattttctgaataaggtcaccggtaaaagtgaaggtacaaagacttgga |
36629952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 28125988 - 28125898
Alignment:
| Q |
6 |
ggtatgggaggaggttccaaacctgctttaaatgctttttgtaacttggtagcttctttacttgac-ttggcagcaactttctttaacatg |
95 |
Q |
| |
|
||||||||||| ||||| ||||||||| |||| || |||||||| | |||||||| || |||| ||||||||| |||||||||||||| |
|
|
| T |
28125988 |
ggtatgggaggtggttcagaacctgcttcaaattctgtttgtaacccgtcagcttcttcacgtgactttggcagcagctttctttaacatg |
28125898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 544
Target Start/End: Complemental strand, 18360756 - 18360665
Alignment:
| Q |
457 |
atatttacttgtttaaca---gaa-gaaagaccgctcccacatattttctgattaggaataccggtaatagtaaaggtgcaaagactaggag |
544 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||||| ||||||||||| |||| |||| || ||||||||| |||||||| |||| |
|
|
| T |
18360756 |
atatttacttgtttaacaacagaacgaaagaccgctcccaaatattttctgaaccggaaacccggcaaaagtaaaggtacaaagacttggag |
18360665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 544
Target Start/End: Original strand, 36602173 - 36602264
Alignment:
| Q |
457 |
atatttacttgtttaaca---gaa-gaaagaccgctcccacatattttctgattaggaataccggtaatagtaaaggtgcaaagactaggag |
544 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||||| ||||||||||| |||| |||| || ||||||||| |||||||| |||| |
|
|
| T |
36602173 |
atatttacttgtttaacaacagaacgaaagaccgctcccaaatattttctgaaccggaaacccggcaaaagtaaaggtacaaagacttggag |
36602264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 36642658 - 36642723
Alignment:
| Q |
156 |
gacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaa |
221 |
Q |
| |
|
|||||||||||||| |||||| | ||| ||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
36642658 |
gacttcaagttacataaagaatgtagcttaaccttcgataaatcaggaactatggagagaatctaa |
36642723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 346 - 407
Target Start/End: Original strand, 36642844 - 36642905
Alignment:
| Q |
346 |
acctgaagagtaattgaagagactatcaatgattttacattggcgaggtctagcagccagct |
407 |
Q |
| |
|
|||||||||||| |||||| |||| | ||||||| |||||| || | ||||||||||||||| |
|
|
| T |
36642844 |
acctgaagagtagttgaagtgactctaaatgattctacattcgcaaagtctagcagccagct |
36642905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 52187872 - 52187783
Alignment:
| Q |
143 |
ttttatttccatcgacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaaacagtcaagaa |
232 |
Q |
| |
|
|||||||| || ||||||||| ||||||| ||| ||| | |||||| ||||||||||||||||| || |||| |||| || ||||||| |
|
|
| T |
52187872 |
ttttattttcagtgacttcaaggtacacaaggaatggaactcaaccttcaataaatcaggaactaaagaaagaacctaagcaatcaagaa |
52187783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 126; Significance: 1e-64; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 136 - 759
Target Start/End: Original strand, 33839341 - 33839954
Alignment:
| Q |
136 |
gttccaattttatttccatcgacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaaacagtcaagaacga |
235 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||| || | | ||| || |
|
|
| T |
33839341 |
gttccaattttatttccaccgacttcaagttacacaaagaaggaagcttaacctccaataaatcaggaactaaggagagaatctaagcattaaggaatga |
33839440 |
T |
|
| Q |
236 |
gagtgaaataagatcagttatgcaagtcaaccaattttaaacaaaattttgaaataacgtaaagaatcttaacaagaaagtaaaattaatgcttcaaaac |
335 |
Q |
| |
|
| ||||| || |||||||||||||||||| |||| || ||||| ||||| ||||||||||||| | ||| |||||| || || ||||| | |
|
|
| T |
33839441 |
gggtgaattaggatcagttatgcaagtcagtggattt--aaaaaaat-----aataa--taaagaatcttaagatgaatgtaaaa-caaagcctcaaatc |
33839530 |
T |
|
| Q |
336 |
atgcctaggtacctgaagagtaattgaagagactatcaatgattttacattggcgaggtctagcagccagctcaatagaaccataggagactcctcaaaa |
435 |
Q |
| |
|
||||| | |||||||||||||| ||||||||||| | ||||||| || || || ||||||||||||||||| ||||||| ||||||||||| || | |
|
|
| T |
33839531 |
atgccaaagtacctgaagagtacttgaagagactgttaatgattctatgttagcaaggtctagcagccagctgaatagaatcataggagacttgtctact |
33839630 |
T |
|
| Q |
436 |
tttgaatgcatttttgcatcaatatttacttgtttaacagaagaaagaccgctcccacatattttctgattaggaataccggtaatagtaaaggtgcaaa |
535 |
Q |
| |
|
|||||| ||| | ||||||||| ||||||| |||||| ||||||| || ||||||||||||||||| |||||| |||| || |||||||||||| | |
|
|
| T |
33839631 |
tttgaaaacatatgtgcatcaatgtttacttctttaacggaagaaaatccactcccacatattttctgtttaggagtaccataaaaagtaaaggtgcaga |
33839730 |
T |
|
| Q |
536 |
gactaggagtggacaactcaatttgggaaaaattagatgaattatgatgcatggctaaatcgacaagtgtctcacttgatatcttgaggatttgagcatc |
635 |
Q |
| |
|
|||| |||| | | ||| |||| | ||| || || |||| | || || ||||| | | |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
33839731 |
gactcggagcagctagctcgattttgtcaaagttgaataaattcttatacaaatataaattgtctagtgtctcacttgatatccggaggatttgtgcatc |
33839830 |
T |
|
| Q |
636 |
ctctatcttacaaccgtaaaggaccaaactattcaacttagtaaaggcggaaaaggggtcaacacagccgtttttatcaccccaaaaggcgaaatttgtt |
735 |
Q |
| |
|
|| | | |||||| || || ||| ||||||||||| |||||||| |||||||| ||| |||| | ||||| |||||| || |||| |||| ||| |
|
|
| T |
33839831 |
cttaaccatacaacgactaatgatcaagctattcaacttggtaaaggctgaaaagggctcagcacaacggttttcatcaccgcagaaggtgaaaccagtt |
33839930 |
T |
|
| Q |
736 |
agatccaagctggtcaatgctggc |
759 |
Q |
| |
|
|||||||||||||| || |||||| |
|
|
| T |
33839931 |
agatccaagctggttaacgctggc |
33839954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 23 - 515
Target Start/End: Original strand, 33843132 - 33843630
Alignment:
| Q |
23 |
caaacctgctttaaatgctttttgtaacttggtagcttctttacttgacttggcagcaactttctttaacatggcat---tcactacgcggggtaatccc |
119 |
Q |
| |
|
|||||| ||||||||||||||| ||| ||||| ||||||||| | ||||||||||||| |||||||||||||||| | |||||| | |||| |
|
|
| T |
33843132 |
caaacccgctttaaatgcttttcgtagcttggaagcttctttgcgtgacttggcagcagctttctttaacatggcttctttcactaagtacaataatttt |
33843231 |
T |
|
| Q |
120 |
agttgagtttgaagaggttccaattttatttccatcgacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatct |
219 |
Q |
| |
|
||| || ||| || ||||||||||||||||||||||||||||||| ||||||||| ||| |||||| ||||||| ||||||||||||||||||| |
|
|
| T |
33843232 |
gtgtgatcttcaagtggctccaattttatttccatcgacttcaagttactcaaagaaggaagcttaacctccaataaattgggaactaaggagagaatct |
33843331 |
T |
|
| Q |
220 |
aaacagtcaagaacgagagtgaaataagatcagttatgcaagtcaaccaattttaaac----aaaattttgaaataacgtaaagaatcttaacaagaaag |
315 |
Q |
| |
|
|| || | | || ||| ||||| || |||||| ||||||||||| |||| ||| |||| || | ||||| ||||||| ||| | | ||| | |
|
|
| T |
33843332 |
aagcattaagtaatgagggtgaattaggatcagatatgcaagtcagtagatttcaaaacaaaaaaagttagcaataaaataaagaaacttgagatgaatg |
33843431 |
T |
|
| Q |
316 |
taaaattaatgcttcaaaacatgcctaggtacctgaagagtaattgaagagactatcaatgattttacattggcgaggtctagcagccagctcaatagaa |
415 |
Q |
| |
|
|||||| || || |||| |||||| ||||||||||||||| |||||| |||| | ||||||| || || || |||||||||||||||| ||||||| |
|
|
| T |
33843432 |
taaaataaa-gccgcaaatcatgccaaggtacctgaagagtttttgaagtgactgttaatgattctaagttagcaaggtctagcagccagcataatagaa |
33843530 |
T |
|
| Q |
416 |
ccataggagactcctcaaaatttgaatgcatttttgcatcaatatttacttgtttaacagaagaaagaccgctcccacatattttctgattaggaatacc |
515 |
Q |
| |
|
||||||||||| || || | |||| ||||||||||||||| ||||||| |||||||||||||| || |||||| |||||||||||| |||| |||| |
|
|
| T |
33843531 |
tcataggagacttgtcgaattctgaaaacatttttgcatcaatgtttacttctttaacagaagaaaatccactcccatatattttctgatcaggagtacc |
33843630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 33839194 - 33839290
Alignment:
| Q |
1 |
catctggtatgggaggaggttccaaacctgctttaaatgctttttgtaacttggtagcttctttacttgacttggcagcaactttctttaacatggc |
97 |
Q |
| |
|
|||| ||||||| ||| ||||| ||||| ||||||||||||||| ||||||||| ||||||||| | |||||| |||||| |||||||||||||||| |
|
|
| T |
33839194 |
catcaggtatggaaggtggttctaaacccgctttaaatgcttttcgtaacttggaagcttctttgcgtgactttgcagcagctttctttaacatggc |
33839290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 450 - 731
Target Start/End: Complemental strand, 10812752 - 10812471
Alignment:
| Q |
450 |
tgcatcaatatttacttgtttaacagaagaaagaccgctcccacatattttctgattaggaataccggtaatagtaaaggtgcaaagactaggagtggac |
549 |
Q |
| |
|
||||| |||||| |||| |||||||||||| ||| || |||| ||||||| ||| ||||| ||| || |||||| || ||||| | |||||||| |
|
|
| T |
10812752 |
tgcataaatattgacttctttaacagaagagagattacttccacctattttcggatgtggaatcccgtaaaaagtaaacgtacaaaggtttggagtggat |
10812653 |
T |
|
| Q |
550 |
aactcaatttgggaaaaattagatgaattatgatgcatggctaaatcgacaagtgtctcacttgatatcttgaggatttgagcatcctctatcttacaac |
649 |
Q |
| |
|
| |||||||| || || ||||||||| ||| || ||| || |||| |||||||||||||||||||| |||| |||||| | ||| ||||||||||| |
|
|
| T |
10812652 |
agctcaattttggcaattttagatgaactataatccatagcaaaatttacaagtgtctcacttgatatgttgatgatttgtgtgtccattatcttacaac |
10812553 |
T |
|
| Q |
650 |
cgtaaaggaccaaactattcaacttagtaaaggcggaaaaggggtcaacacagccgtttttatcaccccaaaaggcgaaatt |
731 |
Q |
| |
|
| | || || |||||| ||||| || |||||||| || ||||| |||||| || |||||| | |||| |||||| |||||| |
|
|
| T |
10812552 |
catgaatgatcaaactcttcaatttggtaaaggccgagaagggctcaacatagtcgttttcaccaccgtaaaaggtgaaatt |
10812471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 450 - 743
Target Start/End: Original strand, 10811887 - 10812181
Alignment:
| Q |
450 |
tgcatcaatatttacttgtttaacagaagaaagaccgctcccacatattttctgattaggaataccggtaata-gtaaaggtgcaaagactaggagtgga |
548 |
Q |
| |
|
||||| |||||| |||| ||||||| |||| ||| || |||| ||||||||||| ||||| ||| || | ||||| || ||||| || |||||||| |
|
|
| T |
10811887 |
tgcataaatattgacttctttaacataagagagattacttccacctattttctgatgtggaatcccgtaaaaaagtaaacgtacaaaggcttggagtgga |
10811986 |
T |
|
| Q |
549 |
caactcaatttgggaaaaattagatgaattatgatgcatggctaaatcgacaagtgtctcacttgatatcttgaggatttgagcatcctctatcttacaa |
648 |
Q |
| |
|
|||||||||| | || ||||||||| ||| |||||| || |||| |||||||||||||||||||| |||| |||||| | ||| || ||||||| |
|
|
| T |
10811987 |
taactcaattttagcaattttagatgaactataatgcatagcaaaattaacaagtgtctcacttgatatgttgatgatttgtgtgtccattaccttacaa |
10812086 |
T |
|
| Q |
649 |
ccgtaaaggaccaaactattcaacttagtaaaggcggaaaaggggtcaacacagccgtttttatcaccccaaaaggcgaaatttgttagatccaa |
743 |
Q |
| |
|
|| || || |||||| ||||| || |||||||| || ||||| || || ||||||||| | |||| |||||| ||||| |||||||||| |
|
|
| T |
10812087 |
ccacgaatgatcaaactcttcaatttggtaaaggccgagaagggctctgcatagccgttttcaccaccgtaaaaggtcaaattgcttagatccaa |
10812181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 114; Significance: 2e-57; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 157 - 755
Target Start/End: Original strand, 42601950 - 42602540
Alignment:
| Q |
157 |
acttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaaacagtcaagaacgagagtgaaataagatcagtt-- |
254 |
Q |
| |
|
|||||||||||||||| |||| |||| |||||| |||||||||||||||||||||||||||||| | | ||| ||||| || |||||||| |
|
|
| T |
42601950 |
acttcaagttacacaacgaagtgagcttaacctccaataaatcaggaactaaggagagaatctaagaaat-------gagggtgaattaggatcagtttt |
42602042 |
T |
|
| Q |
255 |
atgcaagtcaaccaattttaaacaaaatttt-gaaataacgtaaagaatcttaacaagaaagtaaaattaatgcttcaaaacatgcctaggtacctgaag |
353 |
Q |
| |
|
|||||||||||| | ||| |||||||||| ||||||| |||||||||||| ||||||||||||| || | |||||||| | | ||||||||| |
|
|
| T |
42602043 |
atgcaagtcaactgaattttaacaaaatttaagaaataaaa-aaagaatcttaagaagaaagtaaaataaagtccg-aaaacatggcaaagtacctgaat |
42602140 |
T |
|
| Q |
354 |
agtaattgaagagactatcaatgattttacattggcgaggtctagcagccagctcaatagaaccataggagactcctcaaaatttgaatgcatttttgca |
453 |
Q |
| |
|
| || ||||| |||| ||||||||| ||||||||| |||||||||| |||||| | |||| || |||| ||||| ||| ||| || ||| |
|
|
| T |
42602141 |
aataggtgaagtgactttcaatgattctacattggcaaggtctagcaaccagctaagaagaatcaaaggatgctccttcaaagcaaaatattgttgagca |
42602240 |
T |
|
| Q |
454 |
tcaatatttacttgtttaacagaagaaagaccgctcccacatattttctgattaggaataccggtaatagtaaaggtgcaaagactaggagtggacaact |
553 |
Q |
| |
|
||||||||||| |||||||||||||| |||||||||||||||||||||||| | || | ||| | |||||||| | ||||| || |||| || |||| |
|
|
| T |
42602241 |
tcaatatttacatgtttaacagaaga--gaccgctcccacatattttctgatcaagactgccgttgatagtaaatgcacaaaggcttggagcagataact |
42602338 |
T |
|
| Q |
554 |
caatttgggaaaaattagatgaattatgatgcatggctaaatcgacaagtgtctcacttgatatcttgaggatttgagcatcctctatcttacaaccgta |
653 |
Q |
| |
|
| |||| || ||| ||||||| ||| |||||| ||||||| |||||||||||||||||||||| |||||||||| ||||| | || | |||||| | |
|
|
| T |
42602339 |
cgattttggtaaaggaagatgaaatattatgcatagctaaattgacaagtgtctcacttgatatcctgaggatttgtgcatcttttaccgtacaactgct |
42602438 |
T |
|
| Q |
654 |
aaggaccaaactattcaacttagtaaaggcggaaaaggggtcaacacagccgtttttatcaccccaaaaggcgaaatttgttagatccaagctggtcaat |
753 |
Q |
| |
|
|| |||||||||||||||| | ||||||| ||||||| ||| ||| || |||| |||||| |||||||| |||||||| |||||||||||||||||| |
|
|
| T |
42602439 |
aatgaccaaactattcaacctggtaaaggtcaaaaagggttcagcacgaccattttcatcaccgcaaaaggcaaaatttgtgagatccaagctggtcaat |
42602538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 42601794 - 42601890
Alignment:
| Q |
1 |
catctggtatgggaggaggttccaaacctgctttaaatgctttttgtaacttggtagcttctttacttgacttggcagcaactttctttaacatggc |
97 |
Q |
| |
|
|||| ||||||||||| |||| ||||| ||||||||| | ||| |||||| | ||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
42601794 |
catcgggtatgggaggtggttttaaacccgctttaaattcctttcttaacttagcagcttctttacgtgacttggcagcagctttctttaacatggc |
42601890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 135 - 221
Target Start/End: Original strand, 19657373 - 19657459
Alignment:
| Q |
135 |
ggttccaattttatttccatcgacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaa |
221 |
Q |
| |
|
||||||| |||||||||||| ||||| ||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||| |
|
|
| T |
19657373 |
ggttccagttttatttccatagactttaagttgcacaaagaagggagcttaagctctaataattcaggaactaaggagagaatctaa |
19657459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 135 - 221
Target Start/End: Original strand, 19674217 - 19674303
Alignment:
| Q |
135 |
ggttccaattttatttccatcgacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaa |
221 |
Q |
| |
|
||||||| |||||||||||| ||||| ||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||| |
|
|
| T |
19674217 |
ggttccagttttatttccatagactttaagttgcacaaagaagggagcttaagctctaataattcaggaactaaggagagaatctaa |
19674303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 52; Significance: 2e-20; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 35336794 - 35336719
Alignment:
| Q |
146 |
tatttccatcgacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaa |
221 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
35336794 |
tatttccaatgacttcaagttacacaaagaagggagcttaacctccaataaatcaggaactaaggagagaacctaa |
35336719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 452 - 505
Target Start/End: Complemental strand, 35336480 - 35336427
Alignment:
| Q |
452 |
catcaatatttacttgtttaacagaagaaagaccgctcccacatattttctgat |
505 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35336480 |
catcaatgtttacttgtttaacagaagaaagaccgctcccacatattttctgat |
35336427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 35336939 - 35336840
Alignment:
| Q |
1 |
catctggtatgggaggaggttccaaacctgctttaaatgctttttgtaacttggtagcttctttacttgacttggcagcaactttctttaacatggcatt |
100 |
Q |
| |
|
|||| ||||||||||| ||| ||||||||||||||||| ||| |||||| | |||||| |||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
35336939 |
catcaggtatgggaggtggtctcaaacctgctttaaatgtctttcttaactttgcagcttcattacaggacttggcagccgctttctttaacatggcatt |
35336840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 343 - 418
Target Start/End: Complemental strand, 35336589 - 35336514
Alignment:
| Q |
343 |
ggtacctgaagagtaattgaagagactatcaatgattttacattggcgaggtctagcagccagctcaatagaacca |
418 |
Q |
| |
|
|||||||||||||||||||||| | | ||||||||| |||||||| |||||| |||||||| | |||||||||| |
|
|
| T |
35336589 |
ggtacctgaagagtaattgaagtggttgtcaatgattctacattggtaaggtctcgcagccaggttaatagaacca |
35336514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 38; Significance: 0.000000000005; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 346 - 407
Target Start/End: Complemental strand, 5356609 - 5356548
Alignment:
| Q |
346 |
acctgaagagtaattgaagagactatcaatgattttacattggcgaggtctagcagccagct |
407 |
Q |
| |
|
|||||||||||| | ||||||||| |||||||||||| |||||| || |||||||||||||| |
|
|
| T |
5356609 |
acctgaagagtattagaagagactgtcaatgattttatattggcaagctctagcagccagct |
5356548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 7119867 - 7119802
Alignment:
| Q |
156 |
gacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaa |
221 |
Q |
| |
|
||||||||||||||||| ||||| ||| ||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
7119867 |
gacttcaagttacacaaggaaggtagcttaaccttcaataaatcaggaactaaggagagaacctaa |
7119802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 657 - 731
Target Start/End: Complemental strand, 25597435 - 25597361
Alignment:
| Q |
657 |
gaccaaactattcaacttagtaaaggcggaaaaggggtcaacacagccgtttttatcaccccaaaaggcgaaatt |
731 |
Q |
| |
|
|||||||||||||||| | |||||||| ||||||| |||||||| | | ||| |||||| |||||||| ||||| |
|
|
| T |
25597435 |
gaccaaactattcaacattttaaaggcgaaaaagggctcaacacaactgctttcatcaccgcaaaaggcaaaatt |
25597361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 13460708 - 13460643
Alignment:
| Q |
156 |
gacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaa |
221 |
Q |
| |
|
||||||||||||| |||||||| |||| |||| ||||||| ||||||||||||||||| |||| |
|
|
| T |
13460708 |
gacttcaagttacgcaaagaagagagcttaaccctcaataaattaggaactaaggagagaacctaa |
13460643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 30597242 - 30597306
Alignment:
| Q |
157 |
acttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaa |
221 |
Q |
| |
|
|||||||||||||||| ||| ||| | |||||| ||||||||||||||||| ||||||| |||| |
|
|
| T |
30597242 |
acttcaagttacacaaggaatggaactcaaccttcaataaatcaggaactaacgagagaacctaa |
30597306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 43429258 - 43429316
Alignment:
| Q |
157 |
acttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagaga |
215 |
Q |
| |
|
||||||||||||||||||||| || | |||||| |||||||||||| |||||||||| |
|
|
| T |
43429258 |
acttcaagttacacaaagaagagaacttaacctccgataaatcaggaattaaggagaga |
43429316 |
T |
|
Back To:
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Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 43863138 - 43863203
Alignment:
| Q |
156 |
gacttcaagttacacaaagaagggagcccaacctctaataaatcaggaactaaggagagaatctaa |
221 |
Q |
| |
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||||||||||||||||| ||||||||| | |||| |||||| || |||||||||| |||| |||| |
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| T |
43863138 |
gacttcaagttacacaaggaagggagctctaccttcaataaaccacgaactaaggaaagaacctaa |
43863203 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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