View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1355_1D_low_44 (Length: 266)
Name: NF1355_1D_low_44
Description: NF1355_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1355_1D_low_44 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 6 - 255
Target Start/End: Original strand, 35795066 - 35795315
Alignment:
| Q |
6 |
acatatatcatgtgtaccaacagctaatgaaatcagcagtgttgtaaactctctcaaattagctgtcaccttaaacaaaagtgattatgataagttataa |
105 |
Q |
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| T |
35795066 |
acatatatcatgtgtaccaacagctaatgaaatcagcagtgttgtaaactctctcaaattagctgtcaccttaaacaaaagtgattatgataagttataa |
35795165 |
T |
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| Q |
106 |
agtaatgcacttccatttttatctctcttcnnnnnnnncttaagaccatatttccacgttcatgtgtgtttctgttgtttagttattatactaaatagca |
205 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35795166 |
agtaatgcacttccatttttatctctcttcttttttttcttaagaccatatttccacgttcatgtgtgtttctgttgtttagttattatactaaatagca |
35795265 |
T |
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| Q |
206 |
tcttacaatttgtttgataaaaattccatgcactctactttggttttcat |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35795266 |
tcttacaatttgtttgataaaaattccatgcactctactttggttttcat |
35795315 |
T |
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