View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1355_1D_low_53 (Length: 248)
Name: NF1355_1D_low_53
Description: NF1355_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1355_1D_low_53 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 45038627 - 45038874
Alignment:
| Q |
1 |
aaaataaaatgtgatctcagtttagttataaaatttgtactcatattttgtttatnnnnnnnnnntactaatgtaatgttatcattttgcatgtttaata |
100 |
Q |
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| T |
45038627 |
aaaataaaatgtgatctcggtttagttataaaatttgtactcatattttgtttataaaaaaaaaatactaatgtaatgttatcattttgcatgtttaata |
45038726 |
T |
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| Q |
101 |
tgaaggatgtaggtagtataagtgtgtcaagtatgatcaagattagcaataagtagttcagcggttttcaaataaccactttcacaaatgatgttgttat |
200 |
Q |
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||||||||||| ||||||||||||||||||||||||| ||||| | ||||||||||||| | |||||||||||||||||||||||||||||||||||||| |
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| T |
45038727 |
tgaaggatgtaagtagtataagtgtgtcaagtatgattaagatcaacaataagtagttcggtggttttcaaataaccactttcacaaatgatgttgttat |
45038826 |
T |
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| Q |
201 |
aatctttgttgtaacaaaaatcaaaactcgtttaaataacaccaaact |
248 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||| ||||| |
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| T |
45038827 |
aatctttgttgtaacaaaaatcaagactcgtttaaataacacaaaact |
45038874 |
T |
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