View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1355_1D_low_77 (Length: 211)
Name: NF1355_1D_low_77
Description: NF1355_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1355_1D_low_77 |
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Alignment Details
Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 25708202 - 25708394
Alignment:
| Q |
1 |
atcttcaatatgaaggactctttgatctctcatagttgaagtgtttgggtgaactctcttgtcacactagtacttaatattgtacaataactttatgatc |
100 |
Q |
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| T |
25708202 |
atcttcaatatgaaggactctttgatctctcatagttgaagtgtttgggtgaactctcttgtcacactagtacttaatattgtacaataactttatgatc |
25708301 |
T |
|
| Q |
101 |
ggttaataaataccactaacatcattcaatttgcattgggatcaatttatgtgtatgattgattaattggggtggtggcagaaagagggctct |
193 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25708302 |
ggttaataaataccactaacatcattcaatttgcattgggatcaatttatgtgtatgattgattaattggggtggtggcagaaagagggctct |
25708394 |
T |
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