View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1356-INSERTION-2 (Length: 90)
Name: NF1356-INSERTION-2
Description: NF1356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1356-INSERTION-2 |
![](./plan/images/spacer.gif) | ![NF1356-INSERTION-2](./plan/images/spacer.gif) |
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[»] chr1 (1 HSPs) |
![](./plan/images/spacer.gif) | ![chr1 (8-90)||(24007420-24007501)](./plan/images/spacer.gif) |
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Alignment Details
Target: chr1 (Bit Score: 75; Significance: 4e-35; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 75; E-Value: 4e-35
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 24007420 - 24007501
Alignment:
Q |
8 |
ttgagttctttatattgtgcctctgcgcgaatattttcaattttgcttctcaatttcctttttactagctggaaacccgtcat |
90 |
Q |
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T |
24007420 |
ttgagttctttatattgtgcctctgcgcgaatattttcaattttgcttctcaatttcctttttactagctgg-aacccgtcat |
24007501 |
T |
![](./plan/images/spacer.gif) |
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