View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13562_low_10 (Length: 437)

Name: NF13562_low_10
Description: NF13562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13562_low_10
NF13562_low_10
[»] chr3 (13 HSPs)
chr3 (307-419)||(25413876-25413991)
chr3 (156-282)||(50196862-50196987)
chr3 (188-296)||(50197099-50197207)
chr3 (177-296)||(11047445-11047564)
chr3 (177-264)||(30130791-30130878)
chr3 (217-282)||(22312444-22312509)
chr3 (179-236)||(30135513-30135570)
chr3 (179-236)||(30141642-30141699)
chr3 (179-236)||(30145064-30145121)
chr3 (128-245)||(20490915-20491033)
chr3 (177-243)||(36236567-36236632)
chr3 (73-110)||(25413505-25413542)
chr3 (179-243)||(20491129-20491193)
[»] chr7 (6 HSPs)
chr7 (150-243)||(8745844-8745937)
chr7 (177-282)||(41243212-41243317)
chr7 (207-285)||(35035251-35035329)
chr7 (183-234)||(23972471-23972522)
chr7 (177-295)||(5473286-5473404)
chr7 (179-258)||(18226271-18226350)
[»] chr4 (14 HSPs)
chr4 (177-295)||(36165891-36166009)
chr4 (179-295)||(23564284-23564400)
chr4 (207-296)||(11784978-11785067)
chr4 (217-295)||(1460406-1460483)
chr4 (183-258)||(55240415-55240488)
chr4 (191-253)||(9928990-9929052)
chr4 (179-265)||(18523215-18523301)
chr4 (178-296)||(55240577-55240695)
chr4 (177-222)||(23564558-23564603)
chr4 (179-248)||(36165464-36165533)
chr4 (128-241)||(8836995-8837107)
chr4 (127-279)||(582201-582353)
chr4 (217-265)||(9928797-9928845)
chr4 (202-242)||(34542405-34542445)
[»] chr8 (7 HSPs)
chr8 (177-258)||(28883665-28883746)
chr8 (186-282)||(32884545-32884641)
chr8 (153-245)||(30525219-30525311)
chr8 (177-241)||(30525435-30525499)
chr8 (183-282)||(32879709-32879808)
chr8 (177-244)||(42160216-42160283)
chr8 (183-247)||(31599876-31599940)
[»] chr5 (6 HSPs)
chr5 (178-258)||(8402133-8402213)
chr5 (177-258)||(8402003-8402084)
chr5 (209-282)||(6423944-6424018)
chr5 (207-280)||(28431995-28432068)
chr5 (193-246)||(42193713-42193766)
chr5 (128-196)||(42042150-42042218)
[»] scaffold1432 (1 HSPs)
scaffold1432 (183-246)||(949-1012)
[»] chr6 (4 HSPs)
chr6 (178-285)||(6728597-6728706)
chr6 (175-245)||(10742249-10742319)
chr6 (134-255)||(27134143-27134264)
chr6 (217-282)||(27134291-27134356)
[»] chr1 (4 HSPs)
chr1 (183-243)||(35536786-35536846)
chr1 (177-248)||(10645787-10645858)
chr1 (179-243)||(3371645-3371709)
chr1 (183-279)||(25685697-25685793)
[»] chr2 (3 HSPs)
chr2 (177-234)||(30841553-30841610)
chr2 (128-205)||(36201948-36202025)
chr2 (191-243)||(43829620-43829672)
[»] scaffold0557 (2 HSPs)
scaffold0557 (183-249)||(3925-3991)
scaffold0557 (217-265)||(4462-4510)
[»] scaffold0442 (2 HSPs)
scaffold0442 (183-249)||(1548-1614)
scaffold0442 (183-249)||(7663-7729)
[»] scaffold0236 (1 HSPs)
scaffold0236 (179-248)||(22401-22470)


Alignment Details
Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 307 - 419
Target Start/End: Original strand, 25413876 - 25413991
Alignment:
Q  307 gattatatatacttttaatatttctattttggaacattaaagttggtacggtcgcaaac-agcac--tataagtacactagtgtggtcaagtgtggtgtg 403  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||  |||||   |||||||||||||||||||||||||    
T  25413876 gattatatatacttttaatatttctattttggaaaattaaagttggtacggtcgcatactagcactatataacctcactagtgtggtcaagtgtggtgtg 25413975  T
Q  404 tgttttaactaatttt 419  Q
    ||||||||||||||||    
T  25413976 tgttttaactaatttt 25413991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 50196987 - 50196862
Alignment:
Q  156 ctttgatatcatgtaaaacgtgtttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccgaaaacat 255  Q
    |||||||| ||||| |||   |||||||||||||||||||||||| |||| ||||||||| || | | ||||||||||||||||||||   || ||||||    
T  50196987 ctttgataccatgttaaataggtttggatctcatcccaaaagttagctcaaaggatgagggtatttaaacatatttatacactcaacagtacggaaacat 50196888  T
Q  256 gagtaatgtgagacaaataacaaacta 282  Q
    ||| |||||| |||||||| |||||||    
T  50196887 gagcaatgtg-gacaaatatcaaacta 50196862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 296
Target Start/End: Complemental strand, 50197207 - 50197099
Alignment:
Q  188 atcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccgaaaacatgagtaatgtgagacaaataacaaactataacc 287  Q
    |||||||||| ||  ||| ||||||||| |||||   |||||||||||||||||||   ||  ||| |||| |||||| ||||||||||||||||||| |    
T  50197207 atcccaaaagctagatcaaaggatgagggtactcgaccatatttatacactcaacagttcgtgaacctgagcaatgtgggacaaataacaaactataaac 50197108  T
Q  288 atcttcaac 296  Q
    | |||||||    
T  50197107 aacttcaac 50197099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 296
Target Start/End: Complemental strand, 11047564 - 11047445
Alignment:
Q  177 gtttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccgaaaacatgagtaatgtgagacaaataac 276  Q
    ||||||||||||||  |||||||| |||| ||||||||| ||||||  | ||||||||||||||||| | |  |||| |||| |||||| ||| |  |||    
T  11047564 gtttggatctcatcataaaagttagctcaaaggatgagggtactcaagcgtatttatacactcaacagcgcacaaacctgagcaatgtgggactagaaac 11047465  T
Q  277 aaactataaccatcttcaac 296  Q
    |||||| || || |||||||    
T  11047464 aaactacaaacaacttcaac 11047445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 264
Target Start/End: Original strand, 30130791 - 30130878
Alignment:
Q  177 gtttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccgaaaacatgagtaatgt 264  Q
    ||||||||||||||||||||  || |||| | ||||| ||||||||  ||||||||||||||||||| ||| | ||| |||| |||||    
T  30130791 gtttggatctcatcccaaaaactagctcaaatgatgaagatactcaagcatatttatacactcaacagcccaagaacctgagcaatgt 30130878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 22312509 - 22312444
Alignment:
Q  217 tactcatacatatttatacactcaacaacccgaaaacatgagtaatgtgagacaaataacaaacta 282  Q
    |||||| |||||||||||||||||||| |  | ||||||||| ||||||| || ||||||||||||    
T  22312509 tactcaaacatatttatacactcaacatcatggaaacatgaggaatgtgaaactaataacaaacta 22312444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 30135513 - 30135570
Alignment:
Q  179 ttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttataca 236  Q
    |||||||||||||||||||||| |||| | ||||||| ||||||  ||||||||||||    
T  30135513 ttggatctcatcccaaaagttagctcaaatgatgagggtactcaagcatatttataca 30135570  T

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Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 30141642 - 30141699
Alignment:
Q  179 ttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttataca 236  Q
    |||||||||||||||||||||| |||| | ||||||| ||||||  ||||||||||||    
T  30141642 ttggatctcatcccaaaagttagctcaaatgatgagggtactcaagcatatttataca 30141699  T

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Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 30145064 - 30145121
Alignment:
Q  179 ttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttataca 236  Q
    |||||||||||||||||||||| |||| | ||||||| ||||||  ||||||||||||    
T  30145064 ttggatctcatcccaaaagttagctcaaatgatgagggtactcaagcatatttataca 30145121  T

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Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 20491033 - 20490915
Alignment:
Q  128 aattcccacattgtaatacttgacccgactttgatatcatgtaaaacgtgtttggatctcatccc-aaaagttaactcagaggatgaggatactcataca 226  Q
    |||||||||||||||||  || ||| | || ||||| ||||| ||| | | |||||||||||||| ||||| || |||| | || |||| ||||||   |    
T  20491033 aattcccacattgtaatcattaacctggctctgataccatgttaaatgagcttggatctcatcccaaaaagctagctcaaaagacgagggtactcaagta 20490934  T
Q  227 tatttatacactcaacaac 245  Q
    |||||||||||||||||||    
T  20490933 tatttatacactcaacaac 20490915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 36236567 - 36236632
Alignment:
Q  177 gtttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaaca 243  Q
    |||||||| |||||||||||| ||||||| | ||||||| | |||| ||||||||||||| ||||||    
T  36236567 gtttggatgtcatcccaaaagataactcaaatgatgagg-tgctcaaacatatttatacattcaaca 36236632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 25413505 - 25413542
Alignment:
Q  73 tatagtattgatatgatagctaaactttggccgaaaga 110  Q
    |||||||||||||||||| | |||||||||||||||||    
T  25413505 tatagtattgatatgatatcgaaactttggccgaaaga 25413542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 20491193 - 20491129
Alignment:
Q  179 ttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaaca 243  Q
    ||||||||||||||||||| || ||||  |||| | ||| |||||  ||||||||||||||||||    
T  20491193 ttggatctcatcccaaaaggtagctcaacggattatgatgctcatgaatatttatacactcaaca 20491129  T

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Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 8745844 - 8745937
Alignment:
Q  150 acccgactttgatatcatgtaaaacgtgtttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaaca 243  Q
    |||| ||| ||||||||||| ||| | | |||||||||||||||||||||| || | |||||||||||||||  ||||||||||||||||||||    
T  8745844 acccaactctgatatcatgttaaatgagcttggatctcatcccaaaagttagcttaaaggatgaggatactcgaacatatttatacactcaaca 8745937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 41243212 - 41243317
Alignment:
Q  177 gtttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccgaaaacatgagtaatgtgagacaaataac 276  Q
    |||||||||||||||||||||||| ||||  |||||||| ||||||   ||||||||| |||| |||||| |||||| | || ||| || ||||||||||    
T  41243212 gtttggatctcatcccaaaagttagctcaacggatgaggttactcaagtatatttatagactccacaacctgaaaacctaagcaatatgggacaaataac 41243311  T
Q  277 aaacta 282  Q
    ||||||    
T  41243312 aaacta 41243317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 207 - 285
Target Start/End: Original strand, 35035251 - 35035329
Alignment:
Q  207 aggatgaggatactcatacatatttatacactcaacaacccgaaaacatgagtaatgtgagacaaataacaaactataa 285  Q
    ||||||||| |||||| ||||||||||||||||||||| | |||||| |||| ||||||  ||||||||| ||||||||    
T  35035251 aggatgaggctactcaaacatatttatacactcaacaaactgaaaacctgagcaatgtggaacaaataactaactataa 35035329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 23972522 - 23972471
Alignment:
Q  183 atctcatcccaaaagttaactcagaggatgaggatactcatacatatttata 234  Q
    ||||||| ||||||||||||||| ||||||||| |||||| |||||||||||    
T  23972522 atctcattccaaaagttaactcaaaggatgagggtactcaaacatatttata 23972471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 295
Target Start/End: Complemental strand, 5473404 - 5473286
Alignment:
Q  177 gtttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccgaaaacatgagtaatgtgagacaaataac 276  Q
    ||||||||||||| | ||||| ||||| | | ||| ||| |||||||||||||||||||| | | |||||||| ||| |||| ||| |   |||||||||    
T  5473404 gtttggatctcattctaaaagctaacttaaaagataagggtactcatacatatttatacatttagcaacccgagaacttgagcaatatataacaaataac 5473305  T
Q  277 aaactataaccatcttcaa 295  Q
    |||||| || || ||||||    
T  5473304 aaactacaaacaacttcaa 5473286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 258
Target Start/End: Complemental strand, 18226350 - 18226271
Alignment:
Q  179 ttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccgaaaacatgag 258  Q
    ||||||||||| |||||||||| |||| |||| ||||| |||||   ||||||||||| || ||| ||||||||| ||||    
T  18226350 ttggatctcattccaaaagttagctcaaaggaggaggagactcaattatatttatacaatcgacatcccgaaaacctgag 18226271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 295
Target Start/End: Original strand, 36165891 - 36166009
Alignment:
Q  177 gtttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccgaaaacatgagtaatgtgagacaaataac 276  Q
    |||||||||||||| ||||||||| || | ||||||||| | |||| |||| ||||||||||||||| ||||||| | ||| ||||||||||| || ||     
T  36165891 gtttggatctcatcgcaaaagttagcttaaaggatgagggtgctcaaacatgtttatacactcaacatcccgaaagcctgaataatgtgagactaaaaat 36165990  T
Q  277 aaactataaccatcttcaa 295  Q
    |||||| || || ||||||    
T  36165991 aaactacaaacaacttcaa 36166009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 295
Target Start/End: Original strand, 23564284 - 23564400
Alignment:
Q  179 ttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccgaaaacatgagtaatgtgagacaaataacaa 278  Q
    ||||||||||||||||| | ||||| | | ||||| | | || | ||||| ||||||||||||||||| |||||| |||| |||||| ||||||||||||    
T  23564284 ttggatctcatcccaaatgctaacttaaaagatgaaggttctaaaacatacttatacactcaacaacctgaaaacctgagcaatgtgggacaaataacaa 23564383  T
Q  279 actataaccatcttcaa 295  Q
    |||| || || ||||||    
T  23564384 actacaaacaacttcaa 23564400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 296
Target Start/End: Complemental strand, 11785067 - 11784978
Alignment:
Q  207 aggatgaggatactcatacatatttatacactcaacaacccgaaaacatgagtaatgtgagacaaataacaaactataaccatcttcaac 296  Q
    ||||||||| |||||| ||||||||||||||||||||  |||| ||| ||||||||||| ||| || ||||||||| || || |||||||    
T  11785067 aggatgagggtactcaaacatatttatacactcaacagtccgagaacctgagtaatgtgggactaacaacaaactacaaacaacttcaac 11784978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 217 - 295
Target Start/End: Complemental strand, 1460483 - 1460406
Alignment:
Q  217 tactcatacatatttatacactcaacaacccgaaaacatgagtaatgtgagacaaataacaaactataaccatcttcaa 295  Q
    |||||| ||||||||||||||||  |||||||| ||| |||| ||||||||||||||||||||||| || || ||||||    
T  1460483 tactcaaacatatttatacactcc-caacccgagaacctgagcaatgtgagacaaataacaaactacaaacaacttcaa 1460406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 55240488 - 55240415
Alignment:
Q  183 atctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccgaaaacatgag 258  Q
    ||||||||||||||| ||||||| ||||||||||||||||   |||||  |||||||||||||| |||||| ||||    
T  55240488 atctcatcccaaaagctaactcaaaggatgaggatactcaagtatatt--tacactcaacaacctgaaaacctgag 55240415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 9928990 - 9929052
Alignment:
Q  191 ccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccgaaaac 253  Q
    |||||||||| |||| | |||||||||||||| ||||||||||| ||||||| | ||||||||    
T  9928990 ccaaaagttagctcaaaagatgaggatactcaaacatatttatatactcaacgatccgaaaac 9929052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 265
Target Start/End: Original strand, 18523215 - 18523301
Alignment:
Q  179 ttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccgaaaacatgagtaatgtg 265  Q
    ||||||||  ||||||||| || |||| ||||||||| |||||| |||||||||||   ||||||||||| |||| |||| ||||||    
T  18523215 ttggatctgctcccaaaagatacctcaaaggatgagggtactcaaacatatttatatgttcaacaacccggaaacctgagcaatgtg 18523301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 296
Target Start/End: Complemental strand, 55240695 - 55240577
Alignment:
Q  178 tttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccgaaaacatgagtaatgtgagacaaataaca 277  Q
    |||||||||||||||||||| |  |||| | ||||||| ||||||  |||||||||| |||||||| || |||||| |||| |||  || || || ||||    
T  55240695 tttggatctcatcccaaaagctcgctcaaaagatgagggtactcaagcatatttatatactcaacatcctgaaaacttgagcaatacgaaactaacaaca 55240596  T
Q  278 aactataaccatcttcaac 296  Q
    ||||| || || |||||||    
T  55240595 aactacaaacaacttcaac 55240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 23564558 - 23564603
Alignment:
Q  177 gtttggatctcatcccaaaagttaactcagaggatgaggatactca 222  Q
    |||||||||||||||||||||||| |||| ||||||||| ||||||    
T  23564558 gtttggatctcatcccaaaagttagctcaaaggatgagggtactca 23564603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 36165464 - 36165533
Alignment:
Q  179 ttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccg 248  Q
    ||||||||||||||||||  || | || | ||||||| |||||| |||| ||||||||||||||||||||    
T  36165464 ttggatctcatcccaaaatctagcacaaaagatgagggtactcaaacatctttatacactcaacaacccg 36165533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 241
Target Start/End: Original strand, 8836995 - 8837107
Alignment:
Q  128 aattcccacattgtaatacttgacccgactttgatatcatgtaaaacgtgtttggatctcatcccaaaagttaactcagaggatgaggatactcatacat 227  Q
    ||||||| ||||| ||| ||| |||| ||| ||||| ||||| |||   ||||| |||||||||||||  ||| |||| || |||||| |||||| ||||    
T  8836995 aattcccgcattgcaatccttaacccaactgtgataccatgttaaataggtttgaatctcatcccaaagtttagctcaaagaatgagggtactcaaacat 8837094  T
Q  228 atttatacactcaa 241  Q
    |||| |||||||||    
T  8837095 attt-tacactcaa 8837107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 279
Target Start/End: Complemental strand, 582353 - 582201
Alignment:
Q  127 taattcccacattgtaatacttgacccgactttgatatcatgtaaaacgtgtttggatctcatcccaaaagttaactcagaggatgaggatactcataca 226  Q
    |||||||||||||| |||  |  |||||||| ||||| ||||| ||| |   ||| ||||||||  ||||||||||||| ||||| | | || |||   |    
T  582353 taattcccacattgcaatcttaaacccgactctgataccatgttaaatgaacttgaatctcatcttaaaagttaactcaaaggataaaggtattcaagta 582254  T
Q  227 tatttatacactcaacaacccgaaaacatgagtaatgtgagacaaataacaaa 279  Q
    ||||||||||||||||||| |  |||| | |||| |||| ||| |||||||||    
T  582253 tatttatacactcaacaacgctgaaacctaagtattgtgggactaataacaaa 582201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 9928797 - 9928845
Alignment:
Q  217 tactcatacatatttatacactcaacaacccgaaaacatgagtaatgtg 265  Q
    |||||| ||||||||||||||||||||||||| |||  |||| ||||||    
T  9928797 tactcaaacatatttatacactcaacaacccggaaatctgagcaatgtg 9928845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 34542405 - 34542445
Alignment:
Q  202 ctcagaggatgaggatactcatacatatttatacactcaac 242  Q
    |||| ||||||| |||||||| |||||||||||||||||||    
T  34542405 ctcaaaggatgatgatactcaaacatatttatacactcaac 34542445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 28883665 - 28883746
Alignment:
Q  177 gtttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccgaaaacatgag 258  Q
    |||||||||||||| |||||| || ||| ||| |||||| |||||| ||||||||||||||| |||||||||||||| ||||    
T  28883665 gtttggatctcatctcaaaagctacctcggagaatgagggtactcaaacatatttatacacttaacaacccgaaaacctgag 28883746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 32884545 - 32884641
Alignment:
Q  186 tcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccgaaaacatgagtaatgtgagacaaataacaaacta 282  Q
    |||||||||||  ||||| | |||||||||||||||| ||||||||| |||||  ||| |||   ||| |||| |||||||||||||||||||||||    
T  32884545 tcatcccaaaaactaacttaaaggatgaggatactcaaacatatttaaacacttgacatcccatgaacctgagcaatgtgagacaaataacaaacta 32884641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 30525311 - 30525219
Alignment:
Q  153 cgactttgatatcatgtaaaacgtgtttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaac 245  Q
    ||||| ||||| ||||| ||| ||| ||| ||||||||||||||| || |||| || |||||  |||||| ||||||||||||||| ||||||    
T  30525311 cgactctgataccatgttaaatgtgcttgtatctcatcccaaaagctagctcaaagaatgagagtactcaaacatatttatacactaaacaac 30525219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 30525499 - 30525435
Alignment:
Q  177 gtttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaa 241  Q
    ||||||||||||||| ||||| || |||| | ||||| | |||||| ||||||||||||||||||    
T  30525499 gtttggatctcatccaaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaa 30525435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 32879709 - 32879808
Alignment:
Q  183 atctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccgaaaacatgagtaatgtgagacaaataacaaacta 282  Q
    ||||||||||||||  ||||| | ||||||||| |||||  ||||||||| |||||  ||| |||   ||| |||  |||||||||||||||||||||||    
T  32879709 atctcatcccaaaaactaacttaaaggatgagggtactcgaacatatttaaacacttgacatcccatgaacctgaacaatgtgagacaaataacaaacta 32879808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 42160283 - 42160216
Alignment:
Q  177 gtttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaa 244  Q
    |||||||| |||||| |||| ||| |||| | ||| || ||||||| |||||||||||||||||||||    
T  42160283 gtttggatttcatcctaaaatttagctcaaaagataagtatactcagacatatttatacactcaacaa 42160216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 31599940 - 31599876
Alignment:
Q  183 atctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaaccc 247  Q
    |||||| ||||||| ||| |||| |||||||   |||||| ||||||||||||| ||||||||||    
T  31599940 atctcaccccaaaaattagctcaaaggatgaaagtactcaaacatatttatacattcaacaaccc 31599876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 8402133 - 8402213
Alignment:
Q  178 tttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccgaaaacatgag 258  Q
    ||||||| ||||||||||||||| |||| |||| |||| |||||| |||||||||||||||| ||| ||||||||| ||||    
T  8402133 tttggatttcatcccaaaagttagctcaaaggaggagggtactcaaacatatttatacactcgacagcccgaaaacctgag 8402213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 8402003 - 8402084
Alignment:
Q  177 gtttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccgaaaacatgag 258  Q
    ||||||||||||| |||||||||| |||| |||| |||| ||||||  ||||||||||||||| ||| ||||| ||| ||||    
T  8402003 gtttggatctcattccaaaagttagctcaaaggaggagggtactcaagcatatttatacactcgacagcccgagaacctgag 8402084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 6424018 - 6423944
Alignment:
Q  209 gatgaggatactcatacatatttatacactcaacaacccga-aaacatgagtaatgtgagacaaataacaaacta 282  Q
    ||||| |||||||| |||||||||||||||||||| |  || |||| |||  |||||||||||||||||||||||    
T  6424018 gatgatgatactcaaacatatttatacactcaacagctggagaaacttgaacaatgtgagacaaataacaaacta 6423944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 280
Target Start/End: Original strand, 28431995 - 28432068
Alignment:
Q  207 aggatgaggatactcatacatatttatacactcaacaacccgaaaacatgagtaatgtgagacaaataacaaac 280  Q
    ||||||||||||||||  |||||||||||||||| || |||   ||| | || |||||||||||||||||||||    
T  28431995 aggatgaggatactcaagcatatttatacactcagcagcccaggaacctaagcaatgtgagacaaataacaaac 28432068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 42193713 - 42193766
Alignment:
Q  193 aaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacc 246  Q
    ||||||||| ||| | ||| ||| |||||| |||||||||||||||||||||||    
T  42193713 aaaagttaattcaaatgataagggtactcaaacatatttatacactcaacaacc 42193766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 42042218 - 42042150
Alignment:
Q  128 aattcccacattgtaatacttgacccgactttgatatcatgtaaaacgtgtttggatctcatcccaaaa 196  Q
    ||||||||||| | ||| ||| |||||||| ||||| ||||| |||   ||||||||||||||||||||    
T  42042218 aattcccacatcgcaatccttaacccgactctgataccatgttaaataagtttggatctcatcccaaaa 42042150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1432 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 949 - 1012
Alignment:
Q  183 atctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacc 246  Q
    ||||||||||||||| | ||||| |||||||||||||||| ||||||||||||| |||||||||    
T  949 atctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacc 1012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 6728706 - 6728597
Alignment:
Q  178 tttggatctcatcccaaaagttaactcagaggatgaggatactcatacatat--ttatacactcaacaacccgaaaacatgagtaatgtgagacaaataa 275  Q
    ||||||||  |||| |||||||| || | ||  |||| ||||||||||||||  ||||||||| |||||||| ||||| |||  ||||||||||||||||    
T  6728706 tttggatcgaatcctaaaagttagctaaaagattgagaatactcatacatatatttatacacttaacaacccaaaaacctgaacaatgtgagacaaataa 6728607  T
Q  276 caaactataa 285  Q
    ||||||||||    
T  6728606 caaactataa 6728597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 245
Target Start/End: Complemental strand, 10742319 - 10742249
Alignment:
Q  175 gtgtttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaac 245  Q
    ||||||||||||||||||||||| ||| ||| | ||| ||| ||| || ||||||||||||| ||||||||    
T  10742319 gtgtttggatctcatcccaaaagctaaatcaaatgattagggtacccaaacatatttatacattcaacaac 10742249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 255
Target Start/End: Complemental strand, 27134264 - 27134143
Alignment:
Q  134 cacattgtaatacttgacccgactttgatatcatgtaaaacgtgtttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttat 233  Q
    ||||||||||| ||| || |  |||||||| ||||| ||| | ||||| ||||||||| ||||| ||| | | ||||||||  || ||| ||||||||||    
T  27134264 cacattgtaatccttaactcagctttgataccatgttaaatgagtttgaatctcatcctaaaagctaagttaaaggatgagagtagtcaaacatatttat 27134165  T
Q  234 acactcaacaacccgaaaacat 255  Q
    |||||| |||| ||| ||||||    
T  27134164 acactctacaagccggaaacat 27134143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 27134356 - 27134291
Alignment:
Q  217 tactcatacatatttatacactcaacaacccgaaaacatgagtaatgtgagacaaataacaaacta 282  Q
    |||||| |||||||||||||||||||||| ||| ||  | || |||||||||| || |||||||||    
T  27134356 tactcaaacatatttatacactcaacaactcgagaatctaagcaatgtgagactaacaacaaacta 27134291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 35536786 - 35536846
Alignment:
Q  183 atctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaaca 243  Q
    ||||||||||||||||||||||| | ||||||||||||   ||||||||||||| ||||||    
T  35536786 atctcatcccaaaagttaactcaaatgatgaggatacttgaacatatttatacattcaaca 35536846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 10645858 - 10645787
Alignment:
Q  177 gtttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccg 248  Q
    |||| |||||||||  ||||| || |||  ||||||||| |||||| |||||||||||||||||||||||||    
T  10645858 gttttgatctcatcttaaaagatagctctaaggatgagggtactcaaacatatttatacactcaacaacccg 10645787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 3371709 - 3371645
Alignment:
Q  179 ttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaaca 243  Q
    ||||||||||||||||||| || |||| | ||||||| ||||||  ||| | |||||||||||||    
T  3371709 ttggatctcatcccaaaagctacctcaaaagatgagggtactcaagcatgtgtatacactcaaca 3371645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 279
Target Start/End: Complemental strand, 25685793 - 25685697
Alignment:
Q  183 atctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccgaaaacatgagtaatgtgagacaaataacaaa 279  Q
    |||| |||| ||||| || |||| | ||||||  || ||| |||||||||||||||||||||| |  |||  |||  ||||||||||||||||||||    
T  25685793 atcttatcctaaaagctagctcaaatgatgagagtattcaaacatatttatacactcaacaactcagaaatctgaacaatgtgagacaaataacaaa 25685697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 30841553 - 30841610
Alignment:
Q  177 gtttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttata 234  Q
    ||||||||||||||||| ||||||  | | |||||||||||||||| |||||||||||    
T  30841553 gtttggatctcatcccacaagttagtttaaaggatgaggatactcaaacatatttata 30841610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 36202025 - 36201948
Alignment:
Q  128 aattcccacattgtaatacttgacccgactttgatatcatgtaaaacgtgtttggatctcatcccaaaagttaactca 205  Q
    |||| |||||||||||| ||| |||||||| ||||| ||||| |||| || ||| ||||| ||||||||| |||||||    
T  36202025 aatttccacattgtaattcttaacccgactctgataccatgttaaacatgcttgaatctcctcccaaaagctaactca 36201948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 43829620 - 43829672
Alignment:
Q  191 ccaaaagttaactcagaggatgaggatactcatacatatttatacactcaaca 243  Q
    ||||||| || |||| || ||||||||||||| ||||||||||||||||||||    
T  43829620 ccaaaagctagctcaaagaatgaggatactcaaacatatttatacactcaaca 43829672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 3925 - 3991
Alignment:
Q  183 atctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccga 249  Q
    ||||||||  ||||||||||| | ||||||||| |||||| |||||||| |||| |||||| |||||    
T  3925 atctcatcttaaaagttaacttaaaggatgagggtactcaaacatatttgtacattcaacagcccga 3991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 4510 - 4462
Alignment:
Q  217 tactcatacatatttatacactcaacaacccgaaaacatgagtaatgtg 265  Q
    |||||||||||||||||| ||||||||||||| |||  |||| ||||||    
T  4510 tactcatacatatttatatactcaacaacccggaaatctgagcaatgtg 4462  T

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Target: scaffold0442 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 1548 - 1614
Alignment:
Q  183 atctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccga 249  Q
    ||||||||  ||||||||||| | ||||||||| |||||| |||||||| |||| |||||| |||||    
T  1548 atctcatcttaaaagttaacttaaaggatgagggtactcaaacatatttgtacattcaacagcccga 1614  T

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Target: scaffold0442; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 7663 - 7729
Alignment:
Q  183 atctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccga 249  Q
    ||||||||  ||||||||||| | ||||||||| |||||| |||||||| |||| |||||| |||||    
T  7663 atctcatcttaaaagttaacttaaaggatgagggtactcaaacatatttgtacattcaacagcccga 7729  T

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Target: scaffold0236 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 22470 - 22401
Alignment:
Q  179 ttggatctcatcccaaaagttaactcagaggatgaggatactcatacatatttatacactcaacaacccg 248  Q
    |||| |||||||||||||| ||| ||| ||||||| | ||||||  |||||||||||||| |||| ||||    
T  22470 ttggttctcatcccaaaagctaattcaaaggatgaaggtactcaagcatatttatacactgaacatcccg 22401  T

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