View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13564_high_3 (Length: 790)

Name: NF13564_high_3
Description: NF13564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13564_high_3
NF13564_high_3
[»] chr4 (28 HSPs)
chr4 (263-781)||(15348970-15349501)
chr4 (263-781)||(14686899-14687435)
chr4 (263-777)||(42710905-42711434)
chr4 (263-670)||(11497740-11498159)
chr4 (263-657)||(18290701-18291107)
chr4 (263-671)||(10629417-10629834)
chr4 (326-670)||(45240047-45240404)
chr4 (263-490)||(45235358-45235585)
chr4 (118-197)||(11497588-11497668)
chr4 (118-194)||(13822077-13822154)
chr4 (118-194)||(15261063-15261140)
chr4 (118-194)||(22110122-22110199)
chr4 (118-194)||(42710707-42710784)
chr4 (118-197)||(10629906-10629986)
chr4 (118-197)||(14686742-14686822)
chr4 (118-196)||(18082438-18082517)
chr4 (118-197)||(45235202-45235281)
chr4 (118-194)||(3353812-3353889)
chr4 (118-197)||(18291176-18291256)
chr4 (118-197)||(10649572-10649652)
chr4 (118-197)||(15348788-15348868)
chr4 (551-660)||(11918125-11918233)
chr4 (118-194)||(15253511-15253588)
chr4 (118-194)||(15864672-15864749)
chr4 (120-197)||(17485871-17485949)
chr4 (263-452)||(15253230-15253420)
chr4 (366-454)||(22109843-22109931)
chr4 (118-163)||(38425938-38425983)
[»] chr1 (15 HSPs)
chr1 (263-781)||(27045424-27045954)
chr1 (263-670)||(21785591-21785986)
chr1 (118-197)||(27046035-27046115)
chr1 (263-454)||(19876814-19877005)
chr1 (118-194)||(17095577-17095654)
chr1 (118-194)||(21799638-21799715)
chr1 (567-665)||(22626469-22626567)
chr1 (130-197)||(20071902-20071970)
chr1 (128-194)||(3989259-3989326)
chr1 (118-197)||(21785429-21785510)
chr1 (118-194)||(8652186-8652263)
chr1 (118-194)||(20236631-20236708)
chr1 (263-454)||(20236364-20236555)
chr1 (118-194)||(8948529-8948604)
chr1 (274-454)||(8651908-8652087)
[»] chr7 (55 HSPs)
chr7 (263-781)||(539886-540416)
chr7 (263-781)||(16326906-16327430)
chr7 (263-781)||(8783228-8783752)
chr7 (263-781)||(9581453-9581988)
chr7 (263-781)||(4311279-4311811)
chr7 (263-667)||(5395811-5396216)
chr7 (263-671)||(12565670-12566090)
chr7 (263-532)||(14222842-14223111)
chr7 (263-665)||(10439465-10439879)
chr7 (263-671)||(23513736-23514155)
chr7 (428-781)||(9729305-9729676)
chr7 (263-531)||(13355052-13355326)
chr7 (386-671)||(13741088-13741385)
chr7 (618-781)||(14223144-14223313)
chr7 (291-661)||(4461874-4462244)
chr7 (389-540)||(16403557-16403708)
chr7 (118-197)||(539733-539813)
chr7 (118-197)||(16326736-16326816)
chr7 (118-194)||(9582077-9582154)
chr7 (118-194)||(13673019-13673096)
chr7 (118-194)||(16466590-16466667)
chr7 (118-194)||(27290524-27290601)
chr7 (118-197)||(10432716-10432796)
chr7 (118-197)||(14222672-14222752)
chr7 (118-197)||(23514228-23514308)
chr7 (118-194)||(824809-824886)
chr7 (118-194)||(5396299-5396376)
chr7 (118-194)||(8717028-8717105)
chr7 (118-194)||(14550260-14550337)
chr7 (118-194)||(15064955-15065032)
chr7 (118-194)||(15207536-15207613)
chr7 (122-194)||(15917737-15917810)
chr7 (118-194)||(16150458-16150535)
chr7 (118-194)||(16531269-16531346)
chr7 (118-194)||(16634316-16634393)
chr7 (118-194)||(18594241-18594318)
chr7 (118-194)||(18617366-18617443)
chr7 (118-196)||(12566181-12566260)
chr7 (118-193)||(11927883-11927960)
chr7 (118-194)||(13657085-13657162)
chr7 (118-194)||(18286787-18286864)
chr7 (118-194)||(13355401-13355479)
chr7 (118-194)||(48802824-48802901)
chr7 (118-194)||(20107457-20107534)
chr7 (263-454)||(8716747-8716938)
chr7 (263-454)||(14549979-14550170)
chr7 (263-454)||(18286508-18286699)
chr7 (263-454)||(16466755-16466946)
chr7 (274-454)||(48803010-48803190)
chr7 (128-194)||(4311905-4311972)
chr7 (263-454)||(13656816-13657007)
chr7 (118-162)||(4792393-4792437)
chr7 (523-555)||(14223114-14223146)
chr7 (118-155)||(8782968-8783005)
chr7 (357-429)||(13672765-13672837)
[»] chr6 (30 HSPs)
chr6 (263-781)||(22062640-22063168)
chr6 (263-671)||(18188700-18189116)
chr6 (325-781)||(19586777-19587222)
chr6 (263-660)||(17818194-17818603)
chr6 (263-671)||(18852688-18853104)
chr6 (264-687)||(23518879-23519314)
chr6 (274-575)||(25966401-25966707)
chr6 (118-194)||(15698719-15698796)
chr6 (118-194)||(20169407-20169484)
chr6 (118-194)||(21561403-21561480)
chr6 (118-194)||(22166524-22166601)
chr6 (118-194)||(22242976-22243053)
chr6 (118-197)||(18853176-18853256)
chr6 (118-192)||(29594867-29594942)
chr6 (118-194)||(11218790-11218867)
chr6 (118-194)||(18011030-18011107)
chr6 (118-194)||(18447381-18447458)
chr6 (118-194)||(20017203-20017280)
chr6 (118-197)||(22062479-22062559)
chr6 (118-197)||(18188547-18188628)
chr6 (118-194)||(25624931-25625008)
chr6 (118-197)||(25632319-25632399)
chr6 (118-194)||(22768093-22768170)
chr6 (118-194)||(24856219-24856296)
chr6 (118-197)||(15850956-15851036)
chr6 (122-197)||(19967010-19967086)
chr6 (390-455)||(29685446-29685511)
chr6 (531-578)||(29685293-29685340)
chr6 (263-454)||(24856384-24856575)
chr6 (159-197)||(20079668-20079706)
[»] chr3 (64 HSPs)
chr3 (263-781)||(6813419-6813949)
chr3 (263-784)||(12777631-12778170)
chr3 (263-670)||(20562017-20562424)
chr3 (263-670)||(20564325-20564732)
chr3 (263-670)||(20559709-20560116)
chr3 (263-671)||(9362084-9362501)
chr3 (424-781)||(15024254-15024621)
chr3 (263-671)||(13089934-13090351)
chr3 (263-671)||(13096380-13096794)
chr3 (283-579)||(3246663-3246968)
chr3 (118-197)||(6814030-6814110)
chr3 (118-197)||(13096859-13096939)
chr3 (118-196)||(12777494-12777573)
chr3 (118-194)||(3340179-3340256)
chr3 (118-194)||(4369853-4369930)
chr3 (118-194)||(7599518-7599595)
chr3 (118-194)||(10146174-10146251)
chr3 (118-194)||(10161151-10161228)
chr3 (118-194)||(10603446-10603523)
chr3 (118-194)||(13188392-13188469)
chr3 (118-194)||(13505481-13505558)
chr3 (118-194)||(15557920-15557997)
chr3 (118-194)||(15629931-15630008)
chr3 (118-194)||(15945794-15945871)
chr3 (118-194)||(22165286-22165363)
chr3 (118-197)||(9361943-9362023)
chr3 (118-197)||(11946574-11946654)
chr3 (118-197)||(13089782-13089862)
chr3 (118-197)||(20560188-20560268)
chr3 (118-197)||(20562496-20562576)
chr3 (118-197)||(20564804-20564884)
chr3 (121-194)||(12194467-12194541)
chr3 (118-194)||(11865959-11866036)
chr3 (118-194)||(13137144-13137221)
chr3 (118-194)||(15644252-15644329)
chr3 (118-194)||(16449709-16449786)
chr3 (118-194)||(16654893-16654970)
chr3 (118-197)||(10547845-10547925)
chr3 (121-194)||(12188053-12188127)
chr3 (118-194)||(13694064-13694142)
chr3 (118-194)||(13689819-13689896)
chr3 (118-194)||(13196413-13196491)
chr3 (118-194)||(16374455-16374531)
chr3 (119-194)||(3246480-3246555)
chr3 (263-454)||(7599239-7599430)
chr3 (263-462)||(10145886-10146085)
chr3 (118-194)||(13064132-13064208)
chr3 (118-194)||(17386927-17387003)
chr3 (263-462)||(13137309-13137508)
chr3 (132-194)||(1991889-1991950)
chr3 (438-496)||(20154880-20154938)
chr3 (271-454)||(13188565-13188748)
chr3 (263-454)||(15630096-15630287)
chr3 (357-454)||(16374713-16374810)
chr3 (263-454)||(12188215-12188406)
chr3 (263-462)||(12194629-12194828)
chr3 (263-454)||(13196569-13196760)
chr3 (120-163)||(12161168-12161211)
chr3 (263-454)||(13689550-13689741)
chr3 (280-454)||(13505672-13505846)
chr3 (517-653)||(20153465-20153598)
chr3 (118-176)||(37941556-37941619)
chr3 (291-372)||(16654682-16654763)
chr3 (274-420)||(15945532-15945678)
[»] chr8 (40 HSPs)
chr8 (263-781)||(20000852-20001385)
chr8 (263-670)||(20040196-20040615)
chr8 (263-670)||(17619412-17619828)
chr8 (263-672)||(21854903-21855321)
chr8 (118-197)||(20001481-20001561)
chr8 (118-197)||(20711626-20711706)
chr8 (118-197)||(21854754-21854834)
chr8 (118-194)||(8313630-8313707)
chr8 (118-194)||(8323826-8323903)
chr8 (118-194)||(16419585-16419662)
chr8 (118-194)||(19766714-19766791)
chr8 (118-194)||(21099765-21099842)
chr8 (118-194)||(21381255-21381332)
chr8 (118-194)||(21955238-21955315)
chr8 (118-194)||(22101578-22101655)
chr8 (118-194)||(23910603-23910680)
chr8 (118-194)||(29333780-29333857)
chr8 (118-197)||(19365190-19365270)
chr8 (118-197)||(20039963-20040043)
chr8 (118-194)||(22034512-22034589)
chr8 (118-194)||(22100610-22100687)
chr8 (118-194)||(22369128-22369205)
chr8 (122-197)||(17619901-17619977)
chr8 (263-452)||(22034670-22034859)
chr8 (118-194)||(21942412-21942488)
chr8 (263-454)||(22100765-22100956)
chr8 (118-194)||(11347910-11347988)
chr8 (263-454)||(21954962-21955153)
chr8 (263-454)||(22098106-22098297)
chr8 (263-454)||(16419740-16419931)
chr8 (280-419)||(21826303-21826442)
chr8 (291-496)||(11348116-11348321)
chr8 (263-454)||(21380976-21381167)
chr8 (118-163)||(21830232-21830277)
chr8 (263-454)||(8313351-8313542)
chr8 (159-194)||(21826596-21826631)
chr8 (365-454)||(8324093-8324182)
chr8 (274-496)||(21942605-21942827)
chr8 (391-496)||(22903351-22903456)
chr8 (357-496)||(22368798-22368937)
[»] scaffold0035 (2 HSPs)
scaffold0035 (263-781)||(51673-52216)
scaffold0035 (118-194)||(51467-51544)
[»] scaffold0090 (1 HSPs)
scaffold0090 (333-781)||(29312-29778)
[»] chr5 (40 HSPs)
chr5 (263-781)||(23711832-23712370)
chr5 (263-665)||(20445975-20446386)
chr5 (263-660)||(23601767-23602173)
chr5 (263-657)||(18487190-18487596)
chr5 (263-671)||(21282038-21282458)
chr5 (263-671)||(24939200-24939617)
chr5 (263-654)||(24218516-24218916)
chr5 (263-544)||(22827886-22828170)
chr5 (118-197)||(20445805-20445885)
chr5 (118-197)||(21281886-21281966)
chr5 (118-197)||(23601618-23601698)
chr5 (118-197)||(23711651-23711731)
chr5 (118-194)||(15734697-15734774)
chr5 (118-194)||(20596804-20596881)
chr5 (118-194)||(20609381-20609458)
chr5 (118-194)||(20791690-20791767)
chr5 (118-194)||(23747213-23747290)
chr5 (118-194)||(24954149-24954226)
chr5 (118-194)||(25007758-25007835)
chr5 (118-194)||(26846836-26846913)
chr5 (118-194)||(30760596-30760673)
chr5 (118-197)||(22854739-22854819)
chr5 (118-197)||(24218994-24219074)
chr5 (118-197)||(24939689-24939769)
chr5 (118-194)||(18072063-18072140)
chr5 (118-194)||(20621325-20621402)
chr5 (118-194)||(22318465-22318542)
chr5 (118-194)||(25117118-25117195)
chr5 (118-194)||(25176209-25176286)
chr5 (118-194)||(20603090-20603168)
chr5 (118-197)||(18487038-18487118)
chr5 (263-454)||(15734417-15734608)
chr5 (263-446)||(25007923-25008106)
chr5 (263-454)||(22318624-22318815)
chr5 (263-454)||(23746934-23747125)
chr5 (263-454)||(20621046-20621237)
chr5 (272-429)||(24954326-24954483)
chr5 (357-420)||(22947348-22947411)
chr5 (163-197)||(20574610-20574644)
chr5 (118-155)||(22947643-22947680)
[»] scaffold0485 (1 HSPs)
scaffold0485 (263-781)||(11044-11568)
[»] scaffold0026 (4 HSPs)
scaffold0026 (263-671)||(17034-17444)
scaffold0026 (118-197)||(10320-10399)
scaffold0026 (118-197)||(17519-17598)
scaffold0026 (357-496)||(132468-132607)
[»] scaffold0566 (2 HSPs)
scaffold0566 (264-670)||(1275-1693)
scaffold0566 (118-197)||(1777-1857)
[»] scaffold0012 (5 HSPs)
scaffold0012 (263-660)||(12571-12977)
scaffold0012 (263-532)||(8399-8671)
scaffold0012 (118-196)||(8241-8320)
scaffold0012 (118-196)||(12413-12492)
scaffold0012 (517-660)||(8728-8868)
[»] scaffold0220 (3 HSPs)
scaffold0220 (263-532)||(9452-9724)
scaffold0220 (552-671)||(11741-11860)
scaffold0220 (148-197)||(9322-9371)
[»] chr2 (31 HSPs)
chr2 (271-670)||(25339250-25339652)
chr2 (359-671)||(24500997-24501304)
chr2 (118-194)||(116707-116784)
chr2 (118-194)||(16774813-16774890)
chr2 (118-194)||(17589570-17589647)
chr2 (118-194)||(22045635-22045712)
chr2 (118-194)||(23160341-23160418)
chr2 (118-194)||(23571598-23571675)
chr2 (118-194)||(25356674-25356751)
chr2 (118-194)||(27626756-27626833)
chr2 (118-194)||(27630681-27630758)
chr2 (118-194)||(27769770-27769847)
chr2 (118-194)||(24170498-24170574)
chr2 (118-194)||(22664249-22664326)
chr2 (118-194)||(23647100-23647177)
chr2 (118-194)||(25145739-25145816)
chr2 (118-197)||(24517296-24517376)
chr2 (118-194)||(24820996-24821074)
chr2 (118-194)||(12589-12666)
chr2 (118-194)||(24796259-24796336)
chr2 (263-454)||(12754-12945)
chr2 (263-454)||(22045800-22045991)
chr2 (263-454)||(25356395-25356586)
chr2 (118-194)||(23630553-23630630)
chr2 (274-454)||(25368772-25368952)
chr2 (118-194)||(26192592-26192669)
chr2 (439-492)||(20354200-20354253)
chr2 (263-454)||(27626477-27626668)
chr2 (274-416)||(116425-116567)
chr2 (357-496)||(26192856-26192995)
chr2 (280-429)||(27630415-27630564)
[»] scaffold0384 (1 HSPs)
scaffold0384 (118-194)||(9748-9824)
[»] scaffold0222 (1 HSPs)
scaffold0222 (534-657)||(18509-18632)
[»] scaffold0404 (1 HSPs)
scaffold0404 (118-194)||(201-278)
[»] scaffold0156 (1 HSPs)
scaffold0156 (118-194)||(6-83)
[»] scaffold0078 (1 HSPs)
scaffold0078 (118-194)||(29674-29751)
[»] scaffold0032 (2 HSPs)
scaffold0032 (118-194)||(90438-90515)
scaffold0032 (270-419)||(90202-90351)
[»] scaffold0029 (1 HSPs)
scaffold0029 (118-194)||(122533-122610)
[»] scaffold0004 (3 HSPs)
scaffold0004 (118-194)||(18937-19014)
scaffold0004 (118-194)||(355470-355547)
scaffold0004 (118-194)||(252843-252920)
[»] scaffold0206 (2 HSPs)
scaffold0206 (118-197)||(17519-17599)
scaffold0206 (263-326)||(17752-17815)
[»] scaffold0116 (1 HSPs)
scaffold0116 (118-194)||(38697-38775)
[»] scaffold0974 (2 HSPs)
scaffold0974 (118-194)||(276-353)
scaffold0974 (264-454)||(7-197)
[»] scaffold0473 (2 HSPs)
scaffold0473 (118-194)||(13200-13277)
scaffold0473 (263-454)||(12921-13112)
[»] scaffold0374 (1 HSPs)
scaffold0374 (118-194)||(9355-9432)
[»] scaffold0346 (2 HSPs)
scaffold0346 (118-194)||(4581-4658)
scaffold0346 (263-446)||(4730-4914)
[»] scaffold0258 (1 HSPs)
scaffold0258 (118-194)||(23113-23190)
[»] scaffold0117 (2 HSPs)
scaffold0117 (118-194)||(46178-46255)
scaffold0117 (274-454)||(32729-32908)
[»] scaffold0051 (1 HSPs)
scaffold0051 (118-194)||(25352-25429)
[»] scaffold0022 (1 HSPs)
scaffold0022 (118-194)||(24750-24827)
[»] scaffold0020 (4 HSPs)
scaffold0020 (118-194)||(115810-115887)
scaffold0020 (118-194)||(120114-120191)
scaffold0020 (263-451)||(115533-115720)
scaffold0020 (263-451)||(119837-120024)
[»] scaffold0375 (2 HSPs)
scaffold0375 (274-454)||(11412-11592)
scaffold0375 (129-194)||(11699-11765)
[»] scaffold0679 (1 HSPs)
scaffold0679 (118-193)||(7177-7252)
[»] scaffold0031 (1 HSPs)
scaffold0031 (299-382)||(22215-22298)
[»] scaffold0018 (1 HSPs)
scaffold0018 (118-194)||(19162-19240)
[»] scaffold0577 (2 HSPs)
scaffold0577 (118-194)||(5768-5845)
scaffold0577 (360-454)||(4989-5083)
[»] scaffold0322 (1 HSPs)
scaffold0322 (118-194)||(7911-7988)
[»] scaffold0230 (1 HSPs)
scaffold0230 (118-194)||(12650-12727)
[»] scaffold0216 (2 HSPs)
scaffold0216 (118-194)||(10584-10661)
scaffold0216 (355-454)||(10300-10399)
[»] scaffold0146 (1 HSPs)
scaffold0146 (118-194)||(22043-22120)
[»] scaffold0127 (1 HSPs)
scaffold0127 (122-194)||(167-240)
[»] scaffold0037 (4 HSPs)
scaffold0037 (118-194)||(44613-44690)
scaffold0037 (118-194)||(52002-52079)
scaffold0037 (357-441)||(44330-44414)
scaffold0037 (357-441)||(51719-51803)
[»] scaffold0162 (1 HSPs)
scaffold0162 (119-194)||(36080-36156)
[»] scaffold0215 (1 HSPs)
scaffold0215 (118-194)||(7942-8019)
[»] scaffold2037 (1 HSPs)
scaffold2037 (135-197)||(1-64)
[»] scaffold0402 (1 HSPs)
scaffold0402 (270-420)||(6803-6953)
[»] scaffold0113 (2 HSPs)
scaffold0113 (517-671)||(38026-38177)
scaffold0113 (502-532)||(38002-38032)
[»] scaffold0367 (1 HSPs)
scaffold0367 (131-197)||(11758-11823)
[»] scaffold0011 (1 HSPs)
scaffold0011 (129-194)||(161009-161075)
[»] scaffold1571 (1 HSPs)
scaffold1571 (357-454)||(1505-1602)
[»] scaffold0328 (1 HSPs)
scaffold0328 (118-191)||(1212-1285)
[»] scaffold0231 (1 HSPs)
scaffold0231 (366-454)||(21801-21889)
[»] scaffold0034 (1 HSPs)
scaffold0034 (118-158)||(59596-59636)
[»] scaffold1620 (1 HSPs)
scaffold1620 (159-194)||(2-37)
[»] scaffold0506 (1 HSPs)
scaffold0506 (274-420)||(3207-3353)
[»] scaffold1095 (1 HSPs)
scaffold1095 (274-446)||(2167-2339)
[»] scaffold1184 (1 HSPs)
scaffold1184 (541-575)||(537-571)


Alignment Details
Target: chr4 (Bit Score: 439; Significance: 0; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 263 - 781
Target Start/End: Original strand, 15348970 - 15349501
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttattt-gattgcc 361  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  15348970 ctcacaattttattgaagttcataaggtggaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattattttattcatttattttgattgcc 15349069  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttca 461  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15349070 ccttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatccatgcccaccgttca 15349169  T
Q  462 tcattatagtttccaccggcttcttgttcatggtgttgtacacctacctcctcttcatcaccacc------------atcatcttgtacctgtgggttag 549  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||            |||||||||||||||||||||||    
T  15349170 tcattatagtttccaccggctttttgttcatggtgttgtgcacctacctcctcttcatcaccaccatcatcatcaccatcatcttgtacctgtgggttag 15349269  T
Q  550 taccaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattg 649  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15349270 taccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattg 15349369  T
Q  650 gtaattgtgagtagggtcatgggctttaaggaatgacaaagtagtataaaagtttggataatagttctcatctatcctcttgatcccttgattcacactc 749  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  15349370 gtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttgatcccttgattcatactc 15349469  T
Q  750 accccaaacttcttagcaataaaagtgatgat 781  Q
    ||||||||||||||||||||||||||||||||    
T  15349470 accccaaacttcttagcaataaaagtgatgat 15349501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 263 - 781
Target Start/End: Original strand, 14686899 - 14687435
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  14686899 ctcacaattttattgaagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcagaacatttgattgttttattcatttattgtattgccc 14686998  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| |||||||| ||||||    
T  14686999 cttaggacatcgtttcttagcctgatcatttcaacaccttgtctttgttgctcggtgcatgttcttttaactttggtttgcatccatgcccactgttcat 14687098  T
Q  463 cattatagtttccaccggcttcttgttcatggtgttgtacacctacctcctcttcatcaccaccatc------------atcttgtacctgtgggttagt 550  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||            |||||||||||||||||||||    
T  14687099 cattatagtttccaccggctttttgttcatggtgttgtgcacctacctcctattcatcaccaccatcatcatcatcattatcttgtacctgtgggttagt 14687198  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||    
T  14687199 accaacataaagcaaattttccaccgcctccggattagtaatgtccgaattaggtagcataatcaaacaattagctctaataattctccatttatattgg 14687298  T
Q  651 taattgtgagtagggtcatgggctttaaggaatgacaaagt------agtataaaagtttggataatagttctcatctatcctcttgatcccttgattca 744  Q
    |||||||||||||||||||||| | ||||||||||||||||      |||||| |||||| ||||||||||||| |||||||||||||||||||||||||    
T  14687299 taattgtgagtagggtcatgggttctaaggaatgacaaagtagtgagagtatataagtttagataatagttctcctctatcctcttgatcccttgattca 14687398  T
Q  745 cactcaccccaaacttcttagcaataaaagtgatgat 781  Q
    |||||||||||||||||||||||||||||||||||||    
T  14687399 cactcaccccaaacttcttagcaataaaagtgatgat 14687435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 263 - 777
Target Start/End: Original strand, 42710905 - 42711434
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  42710905 ctcacaattttatggaaatccacaaggtggaccttggaggtgaaggtgttgcatcatgtattggaacatttgattgtgttattcatttatttgattgccc 42711004  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||||| || ||||||||| |||||||||| ||| |||||||| ||    
T  42711005 cttaggacatcgtttcttatcccgaccatttcaacaccttgtttttgttgctcgatgcatattatttgaactttggtttgcatccatgtccaccgtttat 42711104  T
Q  463 cattatagtttccaccggcttcttgttcatggtgttgtacacctacctcctcttcatcac---------caccatcatcttgtacctgtgggttagtacc 553  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  42711105 cattatagtttccaccggctttttgttcatggtgttgtgcacctacctcctcttcatcaccaccatcatcaccatcatcttgtacctgtgggttagtacc 42711204  T
Q  554 aacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaa 653  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  42711205 aacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataattctccattcatattggtaa 42711304  T
Q  654 ttgtgagtagggtcatgggctttaaggaatgacaaagt------agtataaaagtttggataatagttctcatctatcctcttgatcccttgattcacac 747  Q
    || |||||| ||||||||| | ||||||| ||||||||      |||||| |||||||||||||| || ||||||||||||||||||| |||||||||||    
T  42711305 ttatgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcctcttgatcctttgattcacac 42711404  T
Q  748 tcaccccaaacttcttagcaataaaagtga 777  Q
    |||||| |||| ||||||||||||||||||    
T  42711405 tcaccctaaacctcttagcaataaaagtga 42711434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 263 - 670
Target Start/End: Original strand, 11497740 - 11498159
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11497740 ctcacaattttattgaagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 11497839  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  11497840 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacatcggtttgcatccatgcccaccgttcat 11497939  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    ||||||||||||||||| ||| ||||| ||||||    | | ||||||||||||||| |||||||||||||||          |||||||||||||||||    
T  11497940 cattatagtttccaccgtcttgttgttaatggtgcaagtttgcacctacctcctctttatcaccaccatcatcaccatcattgtgtacctgtgggttagt 11498039  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
     |||||||| | ||| ||||| |||||||||||||||||||| |  |||||||||||||||||||| |||||| |   | ||| |||||| |||||||||    
T  11498040 gccaacataaaccaagttttctaccacctccggattagtaatatttgaattaggtagaataatcaagcaattaacataattgactctccactcatattgg 11498139  T
Q  651 taattgtgagtagggtcatg 670  Q
    ||||||| || |||||||||    
T  11498140 taattgttagaagggtcatg 11498159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 263 - 657
Target Start/End: Complemental strand, 18291107 - 18290701
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18291107 ctcacaattttattgaagtccataaggtggaccttagaggttaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatttgatttccc 18291008  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  18291007 cttaggacatcgtttcttagcccgatcatttcaacaccttgtcattgttgctcggtgcatgttctttgaacttcggtttgcatccatgcccatcgttcat 18290908  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    ||||||||||||||||||||||||||| ||||||    | | |||||||||||||||||||||||||||||||          |||||||||||||||||    
T  18290907 cattatagtttccaccggcttcttgttaatggtgcaagtttgcacctacctcctcttcatcaccaccatcatcaccatcattgtgtacctgtgggttagt 18290808  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
     |||||||| | ||| ||||| | |||||||||||||||||| || ||||||||||||||||||||  |||| ||  || ||| | |||| |||||||||    
T  18290807 gccaacataaaccaagttttctatcacctccggattagtaatatctgaattaggtagaataatcaataaatttgcattattgaatttccactcatattgg 18290708  T
Q  651 taattgt 657  Q
    |||||||    
T  18290707 taattgt 18290701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 263 - 671
Target Start/End: Complemental strand, 10629834 - 10629417
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10629834 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatttgagtgccc 10629735  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  10629734 cttaggacaccgtttcttagcccgatcatttcaacaccttgtctttgttgctcagtgcatgttctttgaacttcggtttgcatccatgcccaccgttcat 10629635  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    |||||||||||||||||||| |||||| ||||||    | | |||||||||||||||||||||||||||||||          |||||||||||||||||    
T  10629634 cattatagtttccaccggctacttgttaatggtgcaagtttgcacctacctcctcttcatcaccaccatcatcaccatcattgtgtacctgtgggttagt 10629535  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
     ||||||||    || ||||| ||| ||| |||||||||||| || ||||||||||||||||||||  |||||||  || ||| |||||| |||||||||    
T  10629534 gccaacata---aaagttttctaccgccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattgactctccactcatattgg 10629438  T
Q  651 taattgtgagtagggtcatgg 671  Q
     ||||||||| |||| |||||    
T  10629437 gaattgtgagaagggccatgg 10629417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 326 - 670
Target Start/End: Original strand, 45240047 - 45240404
Alignment:
Q  326 gaacatttgattgttttattcatttatttgattgccccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgtt 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||    
T  45240047 gaacatttgattgttttattcatttatttgattgccccttaggacatcgtttcttagcccgatcatttcaacaccttgtctttattgctcgatgcatgtt 45240146  T
Q  426 ctttgaacttcggtttgcatcaatgcccaccgttcatcattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcac 522  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    | | |||||||||||||||||||||    
T  45240147 ctttgaacttcggtttgcatccatgcccaccgttcatcattatagtttccaccggcttcttgttcatggtgcaagtttgcacctacctcctcttcatcac 45240246  T
Q  523 caccatcatc---------ttgtacctgtgggttagtaccaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataat 613  Q
    ||||||||||          ||||||||||||||||| |||||||| | ||| ||||| |||||||||||||||||||| | |||||| |||||||||||    
T  45240247 caccatcatcaccatcattgtgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatattcgaatttggtagaataat 45240346  T
Q  614 caaacaa-ttagctctaatgattctccattcatattggtaattgtgagtagggtcatg 670  Q
    ||| ||| |||||  || ||| |||||| ||||||||||||||||||| |||| ||||    
T  45240347 caagcaatttagcgttattgactctccactcatattggtaattgtgagaagggccatg 45240404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 263 - 490
Target Start/End: Original strand, 45235358 - 45235585
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||| ||||||||||||||| |||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  45235358 ctcacaattttaatgaagtccataaggtagacctttgaggtgaaggtgttgcatcatgtatcagaacatttgattgttttattcatttatttgattgccc 45235457  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  45235458 cttaggaaatcgtttcttagcccgatcatttcaacaccttgtctttattgctcgatgcatgttctttgaacttcggtttgcatccatgcccaccgttcat 45235557  T
Q  463 cattatagtttccaccggcttcttgttc 490  Q
    ||||||||||||||||||||||||||||    
T  45235558 cattatagtttccaccggcttcttgttc 45235585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 11497588 - 11497668
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11497588 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 11497668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 13822154 - 13822077
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  13822154 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 13822077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 15261063 - 15261140
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15261063 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 15261140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 22110199 - 22110122
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  22110199 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 22110122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 42710707 - 42710784
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42710707 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 42710784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 10629986 - 10629906
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10629986 ggagtttggaaacactatgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 10629906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 14686742 - 14686822
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14686742 ggagtttggaaacactacgactcaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 14686822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 18082438 - 18082517
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgattta 196  Q
    |||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18082438 ggagtttggaaacactacgactcaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgattta 18082517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 45235202 - 45235281
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45235202 ggagtttgaaaacactatgactaaagacactttattaggctcccccacacttaggagaaacattgtcctcaatgatttaa 45235281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 3353889 - 3353812
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  3353889 ggagtttggaaacactacgactcaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 3353812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 18291256 - 18291176
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  18291256 ggagtttggaaacactacgactcaagacactttattaggctccccccacacttaggagaagcattttcctcaatgatttaa 18291176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 10649652 - 10649572
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||| |||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  10649652 ggagtttggaaacactatgactaatgacactttattaggctccccccacacttaggagaagcattgtcctcaatgagttaa 10649572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 15348788 - 15348868
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  15348788 ggagtttggaaacactacgactcaagacactttattaggctccccccacacttaggagaaacattgtcctaaatgatttaa 15348868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 551 - 660
Target Start/End: Original strand, 11918125 - 11918233
Alignment:
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
    ||||||||| | ||| ||||||||||||| ||| ||||| ||||||| ||||||||||||||||||| ||||||| ||| ||| | |||| |||||||||    
T  11918125 accaacataaaacaatttttccaccaccttcgggttagttatgtccggattaggtagaataatcaaa-aattagccctattgactttccactcatattgg 11918223  T
Q  651 taattgtgag 660  Q
    ||||||||||    
T  11918224 taattgtgag 11918233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 15253588 - 15253511
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||| | |||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  15253588 ggagtttggaaacactacgactaaagatactttattaggctccccccacacttaagagacgcattgtcctcaatgatt 15253511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 15864749 - 15864672
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||  |||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||    
T  15864749 ggagtttttaaacactacgactaaagacactttattaggctccccccacacttagcagaagcattgtcctcaatgatt 15864672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 17485871 - 17485949
Alignment:
Q  120 agtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||||||||| |||||| ||||||| || |||| ||||||| |||||||||||||||||||||||||||    
T  17485871 agtttggaaacactacgactcaagacactttattaagccccccccacacttgggagaagcattgtcctcaatgatttaa 17485949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 263 - 452
Target Start/End: Complemental strand, 15253420 - 15253230
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| ||||||||| ||||||| || || |||||||||| |||| |||||||||||||  |||| |||||| || || | |||   |||  | |||||    
T  15253420 ctcacatttttattgaggtccatagggagggccttggaggttgaag-tgttgcatcatgttccggagcatttggttattctcttcggatatgcggttgcc 15253322  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttg-aacttcggtttgcatcaatgcc 452  Q
    |||||||||||| ||||||||||||   | |||||||| ||| |||||||||||||||| | | ||||| | || ||||||||||| |||||    
T  15253321 ccttaggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctgcggtttgcatccatgcc 15253230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 366 - 454
Target Start/End: Complemental strand, 22109931 - 22109843
Alignment:
Q  366 aggacatcgtttcttagccc-gatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    |||||||| ||||||||||| ||| ||| |||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  22109931 aggacatcatttcttagcccagataatt-caacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 22109843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 38425983 - 38425938
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc 163  Q
    |||||||| ||||||||||||| |||||| ||||||||||||||||    
T  38425983 ggagtttgaaaacactacgactcaagacactttattaggctccccc 38425938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 437; Significance: 0; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 263 - 781
Target Start/End: Complemental strand, 27045954 - 27045424
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27045954 ctcacaattttattgaagtccttaaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 27045855  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27045854 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccattcat 27045755  T
Q  463 cattatagtttccaccggcttcttgttcatggtgt---tgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    ||||||||||||||||||||||||||| ||||||    | | |||||||||||||||||||||||||||||||         ||||||||||||||||||    
T  27045754 cattatagtttccaccggcttcttgttaatggtgcaagtttgcacctacctcctcttcatcaccaccatcatcaccatcattttgtacctgtgggttagt 27045655  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27045654 accaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccatgcatattgg 27045555  T
Q  651 taattgtgagtagggtcatgggctttaaggaatgacaaagtagtataaaagtttggataatagttctcatctatcctcttgatcccttgattcacactca 750  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  27045554 taattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttgatcccttgattcatactca 27045455  T
Q  751 ccccaaacttcttagcaataaaagtgatgat 781  Q
    |||||||||||||||||||||||||||||||    
T  27045454 ccccaaacttcttagcaataaaagtgatgat 27045424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 263 - 670
Target Start/End: Original strand, 21785591 - 21785986
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||                     |||||||||    
T  21785591 ctcacaattttattgtagtccataaggtggatcttggaggtgaaggtgttgcatcatgtatcggaacatt---------------------tgattgccc 21785669  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21785670 cttaggacatcgtttcttaacccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatccatgcccaccgttcat 21785769  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    ||||||||||||||||| ||||||||| ||||||    | | |||||||||||||||||||||||||||||||          |||||||||||||||||    
T  21785770 cattatagtttccaccgacttcttgttaatggtgcaagtttgcacctacctcctcttcatcaccaccatcatcaccattattgtgtacctgtgggttagt 21785869  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
     ||||||||    || ||||| ||||||| |||||||||||| || ||||||||||||| ||||||  |||||||  || ||| |||||| |||| ||||    
T  21785870 gccaacata---aaagttttctaccaccttcggattagtaatatctgaattaggtagaaaaatcaagaaattagcattattgactctccactcatgttgg 21785966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 27046115 - 27046035
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27046115 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 27046035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 263 - 454
Target Start/End: Original strand, 19876814 - 19877005
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||| ||||||||| |||||||||| |||||||||||||| |  || | |||||||| ||| | |||||||||||||| |||  | || || ||||||    
T  19876814 ctcacatttttattgaggtccataaggaggaccttggaggtggaagtgctccatcatgtttcgaagcatttgattgttttcttcggtcatgtggttgccc 19876913  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    ||||||||||| |||||||||| |   | |||||||| |||||||||||||||||||| | | ||||| || || ||||||||| |||||||    
T  19876914 cttaggacatcatttcttagcctggagagttcaacaccttgtctttgttgctcggtgcttatcctttggacctcagtttgcatccatgccca 19877005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 17095577 - 17095654
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17095577 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 17095654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 21799638 - 21799715
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21799638 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 21799715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 567 - 665
Target Start/End: Original strand, 22626469 - 22626567
Alignment:
Q  567 ttttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtgagtaggg 665  Q
    ||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||  || ||| |||||| ||||||||||||||||||| ||||    
T  22626469 ttttctaccaccaccggattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggtaattgtgagaaggg 22626567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 20071902 - 20071970
Alignment:
Q  130 cactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20071902 cactacgactaaagacactttattaggctcccctcacacttaggagaagcattgtcctcaatgatttaa 20071970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 3989326 - 3989259
Alignment:
Q  128 aacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  3989326 aacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 3989259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 21785429 - 21785510
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct--cccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||| ||||||||||| ||||||| |||  |||||| ||||||||||||||||||||||||||||||||    
T  21785429 ggagtttggaaacactaggactaaagacactttattaagcttccccccatacttaggagaagcattgtcctcaatgatttaa 21785510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 8652263 - 8652186
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||||||||||||||  |||||| |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  8652263 ggagtttggaaacactacgacacaagacactttatttggctccccccacacttaggagaagcattgtcctcaatgatt 8652186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 20236708 - 20236631
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||||||||||| |||||||||| |||||||||||| ||||||||| | |||||||||||||||||||||||    
T  20236708 ggagtttggaaacactacaactaaagacactttattaggctccccccacactcaagagaagcattgtcctcaatgatt 20236631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 263 - 454
Target Start/End: Complemental strand, 20236555 - 20236364
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| ||||||||| ||||||| || || |||||||||| |||| |||||||||||||  || | |||||| || |||| |||   |||  | |||||    
T  20236555 ctcacatttttattgaggtccatagggagggccttggaggttgaag-tgttgcatcatgttccgaagcatttggttattttcttcggatatgcggttgcc 20236457  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    |||||||||||| ||||||||||||   | |||||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  20236456 ccttaggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 20236364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 8948529 - 8948604
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||||||  |||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  8948529 ggagtttggaaac--tacgactaaagacactttattaggctccccccacacttaggagaagcattgttctcaatgatt 8948604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 274 - 454
Target Start/End: Complemental strand, 8652087 - 8651908
Alignment:
Q  274 attgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggacatc 373  Q
    ||||| |||||||||| | |||||||||||  ||||||||||||||||  || | ||||||||| || | |||   |||  | ||| |||||||||||||    
T  8652087 attgaggtccataaggagaaccttggaggttgagatgttgcatcatgttccgaagcatttgattattctcttcggatatacggttgtcccttaggacatc 8651988  T
Q  374 gtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
     |||||||||||||| | |||||||| ||| |||||||||||||||| | |  ||| ||| ||||| |||||| |||||||    
T  8651987 atttcttagcccgat-agttcaacacattgcctttgttgctcggtgcttatcatttcaacctcggtgtgcatccatgccca 8651908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 433; Significance: 0; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 263 - 781
Target Start/End: Original strand, 539886 - 540416
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  539886 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 539985  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  539986 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcgatgcatgttctttgaacttcggtttgcatcaatgcctaccgttcat 540085  T
Q  463 cattatagtttccaccggcttcttgttcatggtgt---tgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    |||||||||||||||| |||||||||| ||||||    | | |||||||||||||||||||||||||||||||         ||||||||||||||||||    
T  540086 cattatagtttccaccagcttcttgttaatggtgcaagtttgcacctacctcctcttcatcaccaccatcatcaccatcattttgtacctgtgggttagt 540185  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  540186 accaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctttaatgattctcctttcatattgg 540285  T
Q  651 taattgtgagtagggtcatgggctttaaggaatgacaaagtagtataaaagtttggataatagttctcatctatcctcttgatcccttgattcacactca 750  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  540286 taattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttgatcccttgattcacactca 540385  T
Q  751 ccccaaacttcttagcaataaaagtgatgat 781  Q
    |||||||||||||||||||||||||||||||    
T  540386 ccccaaacttcttagcaataaaagtgatgat 540416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 263 - 781
Target Start/End: Original strand, 16326906 - 16327430
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||| |    
T  16326906 ctcagaattttattgtagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcggaacattggattgttttattcattcatttgattgctc 16327005  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  16327006 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaactttggtttgcatccatgcccaccgttcat 16327105  T
Q  463 cattatagtttccaccggcttcttgttcatggtgttgtacacctacctcctcttcatcaccaccatcatcttgtacctgtgggttagtaccaacatacag 562  Q
    ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  16327106 cattatagtgtccaccggctttttgttcatggtgttgtgcacctacctcctcttcatcaccaccatcatcttgtacctgtgggttagtaccaacataaag 16327205  T
Q  563 caaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtgagta 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16327206 caaattttccaccacctccggattagtaatgtccgaattaggtagaatagtcaaacaattagctctaataattctccattcatattggtaattgtgagta 16327305  T
Q  663 gggtcatgggctttaaggaatgacaaagt------agtataaaagtttggataatagttctcatctatcctcttgatcccttgattcacactcaccccaa 756  Q
    |||||||||| | ||||||| ||||||||      |||||| |||||| |||||||||| || |||||||||||||||||||||||||||||||||| ||    
T  16327306 gggtcatgggttataaggaaggacaaagtagtaagagtatataagtttagataatagttttcctctatcctcttgatcccttgattcacactcaccctaa 16327405  T
Q  757 acttcttagcaataaaagtgatgat 781  Q
    || ||||||||||||||||||||||    
T  16327406 acctcttagcaataaaagtgatgat 16327430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 263 - 781
Target Start/End: Original strand, 8783228 - 8783752
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| |  || ||||||||| |||| ||||||||||  |||||||    
T  8783228 ctcacaattttattgaggtccataaggtggaccttggaggtgaaggtgtagcatcatgttttagagcatttgattattttcttcatttattcaattgccc 8783327  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||    
T  8783328 cttaggacatcgtttcttagcccgaccatttcaacactttgtctttgttgctcggtgcatattctttgaacttcggtttgcatccacgcccaccgttcat 8783427  T
Q  463 cattatagtttccaccggcttcttgttcatggtgttgtacacctacctcctcttcatcaccaccatcatcttgtacctgtgggttagtaccaacatacag 562  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||    
T  8783428 cattatagtttccaccggattcttgttcatggtgttgtgcacctacctcctcttcatcaccaccatgatcttgtacatgtgggttagtaccaacataaag 8783527  T
Q  563 caaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtgagta 662  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||| || |||| ||||||| |||||||| |||||||||||||    
T  8783528 caaattttccaccacctccggattagttatgtccgaattagggagaataatcaaaaaattatctgtaataattctcctttcatatttgtaattgtgagta 8783627  T
Q  663 gggtcatgggctttaaggaatgacaaagt------agtataaaagtttggataatagttctcatctatcctcttgatcccttgattcacactcaccccaa 756  Q
    ||| |||||| | ||||||| | ||||||      |||||| |||| | ||||||||||| | ||||||| |||||||| ||||||||||||||||||||    
T  8783628 gggccatgggttgtaaggaagggcaaagtagtgagagtatataagtctagataatagttcccctctatccccttgatccattgattcacactcaccccaa 8783727  T
Q  757 acttcttagcaataaaagtgatgat 781  Q
    ||||| |||||||||| ||||||||    
T  8783728 acttcctagcaataaaggtgatgat 8783752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 263 - 781
Target Start/End: Complemental strand, 9581988 - 9581453
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  9581988 ctcacaattttatggaaatccacaaggtggaccttggaggtgaaggtgttgcatcatg-atcggaacatttgattgtgttattcatttatttgattgccc 9581890  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||| ||||| ||||||||||| |||| |||||||||| ||| || || ||||||||| |||||||||| |||||||||||| ||    
T  9581889 cttaggacatcgtttcttatcccgaccatttcaacaccttgtttttgttgctcagtgtatattatttgaactttggtttgcatccatgcccaccgtttat 9581790  T
Q  463 cattatagtttccaccggcttcttgttcatggtgttgtacacctacctcctcttcatcaccaccat------------catcttgtacctgtgggttagt 550  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||            ||||||||||||||||||||||    
T  9581789 cattatagtttccaccggctttttgttcatggtgttgtgcacctacctcctcttcatcaccaccatcatcatcaccatcatcttgtacctgtgggttagt 9581690  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||     
T  9581689 accaacataaagcaaattttccaccacctccagattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatcctccattcatattga 9581590  T
Q  651 taattgtgagtagggtcatgggctttaaggaatgacaaagt------agtataaaagtttggataatagttctcatctatcctcttgatcccttgattca 744  Q
    |||||||||||| ||||||||| | ||||||| ||||||||      |||||| |||||||||||||| || ||||||||||||||||||||||||||||    
T  9581589 taattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcctcttgatcccttgattca 9581490  T
Q  745 cactcaccccaaacttcttagcaataaaagtgatgat 781  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  9581489 cactcaccctaaacctcttagcaataaaagtgatgat 9581453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 263 - 781
Target Start/End: Complemental strand, 4311811 - 4311279
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||| || ||| ||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||    
T  4311811 ctcacaattttattgaggttcattaggtggaccttggaggtgaaggtgttgcatcatgtttcggagcatttgattgttttattcatttattcgattgccc 4311712  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||| ||||| ||||||||||| |||| ||||||||||||||||| ||| |||||||||||||| |||| |||||||||||||||    
T  4311711 cttaggacatcgtttcttatcccgaccatttcaacaccttgtttttgttgctcggtgcatattccttgaacttcggtttacatccatgcccaccgttcat 4311612  T
Q  463 cattatagtttccaccggcttcttgttcatggtgttgtacacctacctcctcttcatcaccaccat---------catcttgtacctgtgggttagtacc 553  Q
    |||||||||||||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||         |||||||||| ||||||||||||||    
T  4311611 cattatagtttccaccagcttctttttcatggcgttgtgcacctacctcctcttcatcaccaccatcatcaccatcatcttgtacatgtgggttagtacc 4311512  T
Q  554 aacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaa 653  Q
    ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4311511 aacgtaaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaataattctccattcatattggtaa 4311412  T
Q  654 ttgtgagtagggtcatgggctttaaggaatgacaaagt------agtataaaagtttggataatagttctcatctatcctcttgatcccttgattcacac 747  Q
    |||||||||||| |||||| | |||| || ||||||||      |||||| |||| | ||||||||||| | ||||||||||||||| ||||||||||||    
T  4311411 ttgtgagtagggccatgggttctaagaaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcctcttgatctcttgattcacac 4311312  T
Q  748 tcaccccaaacttcttagcaataaaagtgatgat 781  Q
    || ||||||||||| ||| |||||| ||||||||    
T  4311311 tc-ccccaaacttcctagaaataaaggtgatgat 4311279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 257; E-Value: 1e-142
Query Start/End: Original strand, 263 - 667
Target Start/End: Complemental strand, 5396216 - 5395811
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttattt-gattgcc 361  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5396216 ctcacaattttattgaagttcataaggtggaccttggaggtgaatgtgttgcatcatgtatcggaacatttgattgttttattcatttattttgattgcc 5396117  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttca 461  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5396116 ccttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatccatgcccaccgttca 5396017  T
Q  462 tcattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatcttgtacctgtgggttagtaccaacat 558  Q
    |||||||||||||||||||||||||||| ||||||    | | ||||||||||||||||||   |||||||||  ||||||||||||||||| |||||||    
T  5396016 tcattatagtttccaccggcttcttgttaatggtgcaagtttgcacctacctcctcttcat---caccatcattgtgtacctgtgggttagtgccaacat 5395920  T
Q  559 acagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtg 658  Q
    | | ||| ||||| |||||||||||||||||||| || ||||||||||||||||||||  |||||||  || |||  ||||| |||| |||||||||||     
T  5395919 aaaccaagttttctaccacctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattgacgctccactcattttggtaattgtt 5395820  T
Q  659 agtagggtc 667  Q
    || ||||||    
T  5395819 agaagggtc 5395811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 263 - 671
Target Start/End: Complemental strand, 12566090 - 12565670
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12566090 ctcacaattttattgaagtccataaggtagaacttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 12565991  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  12565990 cttaggacatcgtttcttagcccgatcgtttcaacactttgtctttgttgcttggtgcatgttctttgaacttcggtttgcatccatgcccaccgttcat 12565891  T
Q  463 cattatagtttccaccggcttcttgttcatggtgt---tgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    |||||||||||||||| ||||||| || |||||||   | | |||||||||||||||||||||||||||||||          |||||| ||||||||||    
T  12565890 cattatagtttccaccagcttcttcttaatggtgtaagtttgcacctacctcctcttcatcaccaccatcatcaccatcattgtgtaccggtgggttagt 12565791  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
    ||||||||| | ||| ||||| |||||||||| ||||||||| || |||||||||  |||||||||  |||||||  || ||| |||||| |||||||||    
T  12565790 accaacataaaccaagttttctaccacctccgaattagtaatatctgaattaggttaaataatcaagaaattagcattattgactctccactcatattgg 12565691  T
Q  651 taattgtgagtagggtcatgg 671  Q
    ||||||| || |||| |||||    
T  12565690 taattgttagaagggccatgg 12565670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 263 - 532
Target Start/End: Original strand, 14222842 - 14223111
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14222842 ctcacaattttattgtagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcattcatttgattgccc 14222941  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||    
T  14222942 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgcttggtgcatgttctttgaactttggtttgcatccatgcccaccgttcat 14223041  T
Q  463 cattatagtttccaccggcttcttgttcatggtgttgtacacctacctcctcttcatcaccaccatcatc 532  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  14223042 cattatagtttccaccggctttttgttcatggtgttgtgcacctacctcctcttcatcaccaccatcatc 14223111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 263 - 665
Target Start/End: Original strand, 10439465 - 10439879
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||| |||||    
T  10439465 ctcacaattttattgaagtccaaaaggtagaccttggaggtgaaggtgttgcatcatgtatcagaacatttgattgttttatgcatttatttgagtgccc 10439564  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  10439565 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgatgctcggtgcatgttctttgaacttaagtttgcatcaatgcccaccgttcat 10439664  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    |||||||||||||||||||| |||||| ||||||    | | |||||||||||||||||||||||||||||||          |||||||||||||||||    
T  10439665 cattatagtttccaccggctacttgttaatggtgcaagtttgcacctacctcctcttcatcaccaccatcatcaccatcattgtgtacctgtgggttagt 10439764  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
     |||||||| | ||| ||||| ||||||| | | |||||||| || ||||||||||||||||||||  ||||| |  || ||| |||||| |||||||||    
T  10439765 gccaacataaaccaagttttctaccaccttcagcttagtaatatctgaattaggtagaataatcaagaaattatcattattgactctccactcatattgg 10439864  T
Q  651 taattgtgagtaggg 665  Q
    |||||||||| ||||    
T  10439865 taattgtgagaaggg 10439879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 263 - 671
Target Start/End: Complemental strand, 23514155 - 23513736
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||||||| | |||||||||||| ||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  23514155 ctcacaattttattgaagtctagaaggtggaccttagaggtgaaggtgttgcatcatgtatcggaacattggattgtgttattcatttatttgattgccc 23514056  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||| || |||||||||||| |||||||||| ||||||||||||| |    
T  23514055 cttaggacatcatttcttagcccgatcatttcaacaccttgtcattgttgctcggtgaatattctttgaactttggtttgcatccatgcccaccgttctt 23513956  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    | ||||||||||||||||||| ||||||||||||    | | |||||||||||||||||||||||||||||||          |||||||||||||||||    
T  23513955 c-ttatagtttccaccggctttttgttcatggtgcaagtttgcacctacctcctcttcatcaccaccatcatcaccatcattgtgtacctgtgggttagt 23513857  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
     |||||||| |  || ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||  || ||| |||||| |||||| ||    
T  23513856 gccaacataaacaaagttttctaccacctccggattagtaatgtccgaattaggtagaataatcaagtaattagcattattgactctccactcatatagg 23513757  T
Q  651 taattgtgagtagggtcatgg 671  Q
    |||||||||| |||| |||||    
T  23513756 taattgtgagaagggccatgg 23513736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 428 - 781
Target Start/End: Complemental strand, 9729676 - 9729305
Alignment:
Q  428 ttgaacttcggtttgcatcaatgcccaccgttcatcattatagtttccaccggcttcttgttcatggtgttgtacacctacctcctcttcatcaccacca 527  Q
    |||||||| |||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  9729676 ttgaactttggtttgcatccatgcccaccgtttatcattatagtttccaccggctttttgttcatggtgttgtgcacctacctcctcttcatcaccacca 9729577  T
Q  528 tcatc------------ttgtacctgtgggttagtaccaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatca 615  Q
    |||||            |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9729576 tcatcatcaccatcatcttgtacctgtggattagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatca 9729477  T
Q  616 aacaattagctctaatgattctccattcatattggtaattgtgagtagggtcatgggctttaaggaatgacaaagt------agtataaaagtttggata 709  Q
    ||||||||| |||||| || |||||||||||||| |||||||||||| ||||||||| | ||||||| ||||||||      |||||| |||||||||||    
T  9729476 aacaattagttctaataatcctccattcatattgataattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggata 9729377  T
Q  710 atagttctcatctatcctcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat 781  Q
    ||| || ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  9729376 ataattttcatctatcctcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat 9729305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 263 - 531
Target Start/End: Complemental strand, 13355326 - 13355052
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  13355326 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatttaagtgccc 13355227  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggt---ttgcatcaatgcccaccgtt 459  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||||| || |||||||||    
T  13355226 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgttgcatccattcccaccgtt 13355127  T
Q  460 catcattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcat 531  Q
    ||||||||||||||||||||||| |||||| ||||||    | | |||||||||| |||||||||||||||||||    
T  13355126 catcattatagtttccaccggctacttgttaatggtgcaagtttgcacctacctcgtcttcatcaccaccatcat 13355052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 386 - 671
Target Start/End: Complemental strand, 13741385 - 13741088
Alignment:
Q  386 gatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcatcattatagtttccaccggcttct 485  Q
    |||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13741385 gatcatttcaacaccttgtcttcgttgctcggtgcatattctttgaacttcggtttgcatccatgcccaccgttcatcattatagtttccaccggcttct 13741286  T
Q  486 tgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagtaccaacatacagcaaattttcca 573  Q
    |||||||||||    | | |||||||||||||||||||||||||||||||          ||||||||||| ||||| |||||||| |   | ||||| |    
T  13741285 tgttcatggtgcaagtttgcacctacctcctcttcatcaccaccatcatcaccatcattgtgtacctgtggattagtgccaacataaacatagttttcta 13741186  T
Q  574 ccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtgagtagggtcatgg 671  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||| |  || ||| |||||| ||||||||||||||||||| |||| |||||    
T  13741185 ccacctccgaattagtaatgtccgaattaggtagaataatcaagcaattatcattattgactctccactcatattggtaattgtgagaagggccatgg 13741088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 618 - 781
Target Start/End: Original strand, 14223144 - 14223313
Alignment:
Q  618 caattagctctaatgattctccattcatattggtaattgtgagtagggtcatgggctttaaggaatgacaaagt------agtataaaagtttggataat 711  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||| |||||| ||||||    
T  14223144 caattagctctaatgattctccattcatattggtaattgtgagtagggtcatgggctttaaggaatgacaaagtagtgagagtatataagtttagataat 14223243  T
Q  712 agttctcatctatcctcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat 781  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14223244 agttctcctctttcctcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat 14223313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 291 - 661
Target Start/End: Original strand, 4461874 - 4462244
Alignment:
Q  291 ggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggacatcgtttcttagcccgatca 390  Q
    ||||||||||||| |||||||||||||||   |   |||||  | ||||||| ||||| ||||||||| |||||| ||||||| || |  ||||||   |    
T  4461874 ggaccttggaggttaagatgttgcatcatccttaataacatgcggttgttttcttcatgtatttgatttcccctttggacatcattccgcagcccggaga 4461973  T
Q  391 tttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcatcattatagtttccaccggcttcttgttc 490  Q
    |||||| || || |||||||||||| | ||   ||||||| | ||||||||||||| ||||||||| |||||||| |||||  |||||| ||||||||||    
T  4461974 tttcaaaaccttatctttgttgctcagggctcattctttgtagttcggtttgcatccatgcccaccattcatcatcatagtgcccaccgacttcttgttc 4462073  T
Q  491 atggtgt---tgtacacctacctcctcttcatcaccaccatcatcttgtacctgtgggttagtaccaacatacagcaaattttccaccacctccggatta 587  Q
    || |||    ||| || || ||||||||||||||||| ||||||   ||||| ||||||||||||||| ||| ||||||||||||||||||| ||| |||    
T  4462074 atagtgcaagtgtgcatcttcctcctcttcatcaccatcatcat---gtaccagtgggttagtaccaatataaagcaaattttccaccaccttcgggtta 4462170  T
Q  588 gtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtgagt 661  Q
    || |||  || ||||||||||||||||||||||| ||||||||||||| || | |||||||||| |||||||||    
T  4462171 gttatgaacggattaggtagaataatcaaacaatgagctctaatgattttctaatcatattggtcattgtgagt 4462244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 389 - 540
Target Start/End: Complemental strand, 16403708 - 16403557
Alignment:
Q  389 catttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcatcattatagtttccaccggcttcttgt 488  Q
    ||||||| |||  ||||||||||| ||||||| | |||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  16403708 catttcagcaccatgtctttgttgttcggtgcttattctttgaactttggtttgcatccatgcccaccgttcatcattatagttcccaccggcatcttgt 16403609  T
Q  489 tcatggtg---ttgtacacctacctcctcttcatcaccaccatcatcttgtacct 540  Q
    | ||||||    ||| ||||||||||||||||||   ||||||||||||||||||    
T  16403608 ttatggtgcaagtgtgcacctacctcctcttcat---caccatcatcttgtacct 16403557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 539733 - 539813
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  539733 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 539813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 16326736 - 16326816
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16326736 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 16326816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 9582154 - 9582077
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  9582154 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 9582077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 13673096 - 13673019
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  13673096 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 13673019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 16466590 - 16466667
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16466590 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 16466667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 27290601 - 27290524
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  27290601 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 27290524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 10432716 - 10432796
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10432716 ggagtttggaaacactacgactcaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 10432796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 14222672 - 14222752
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14222672 ggagtttggaaacactacgactaaagatactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 14222752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 23514308 - 23514228
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23514308 ggagtttggaaacactacgactaatgacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 23514228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 824886 - 824809
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||    
T  824886 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttagaagaagcattgtcctcaatgatt 824809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 5396376 - 5396299
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  5396376 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaaacattgtcctcaatgatt 5396299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 8717105 - 8717028
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  8717105 ggagtttggaaacactacgactaaagacactttattaggctccccccacgcttaggagaagcattgtcctcaatgatt 8717028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 14550337 - 14550260
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||    
T  14550337 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgttctcaatgatt 14550260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 15065032 - 15064955
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  15065032 ggagtttgaaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 15064955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 15207536 - 15207613
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15207536 ggagtttggaaacactatgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 15207613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 15917737 - 15917810
Alignment:
Q  122 tttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15917737 tttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 15917810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 16150458 - 16150535
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16150458 ggagtttgaaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 16150535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 16531346 - 16531269
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  16531346 ggagtttggaaacactacgactaaaaacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 16531269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 16634316 - 16634393
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16634316 ggagtttggaaacactacgactaaaaacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 16634393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 18594241 - 18594318
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18594241 ggagtttggaagcactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 18594318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 18617443 - 18617366
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  18617443 ggagtttggaagcactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 18617366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 12566260 - 12566181
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgattta 196  Q
    |||||||||||||||||||||| |||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  12566260 ggagtttggaaacactacgactcaagacactttattaggctccccccacagttaggagaagcattgtcctcaatgattta 12566181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 11927883 - 11927960
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattagg--ctcccccacacttaggagaagcattgtcctcaatgat 193  Q
    ||||||||||||||||||||||||||||| |||||||||  | |||||||||||||||||||||||||||||||||||    
T  11927883 ggagtttggaaacactacgactaaagacactttattaggcccccccccacacttaggagaagcattgtcctcaatgat 11927960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 13657162 - 13657085
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||| ||| |||||||||||||||||||||||    
T  13657162 ggagtttggaaacactacgactaaagacactttattaggctccccccacaattacgagaagcattgtcctcaatgatt 13657085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 18286864 - 18286787
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||    
T  18286864 ggagtttggaaacactatgactaaagacactttattaggctccccccacacttaggagaagcattgtcctaaatgatt 18286787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 13355479 - 13355401
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc--cacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||  ||||||||||||||||||||||||||||||||    
T  13355479 ggagtctggaaacactacgactcaagacactttattaggctcccctccacacttaggagaagcattgtcctcaatgatt 13355401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 48802824 - 48802901
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||||||||||||||  |||||| |||||||| |||||| ||||||||||||||||||||||||||||||||    
T  48802824 ggagtttggaaacactacgacacaagacactttattagactccccccacacttaggagaagcattgtcctcaatgatt 48802901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 20107534 - 20107457
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||| ||||||||||||  |||||| |||||||||||||||| ||||||||||||| |||||||||||||||||    
T  20107534 ggagtttgaaaacactacgacacaagacactttattaggctccccccacacttaggagaaacattgtcctcaatgatt 20107457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 263 - 454
Target Start/End: Complemental strand, 8716938 - 8716747
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| ||||||||| ||||||| || || |||||||||| |||| |||||||||||||  || | |||||| || |||| |||   |||  | |||||    
T  8716938 ctcacatttttattgaggtccatagggagggccttggaggttgaag-tgttgcatcatgttccgaagcatttggttattttcttcggatatgcggttgcc 8716840  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    || ||||||||| ||||||||||||   | |||||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  8716839 ccgtaggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 8716747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 263 - 454
Target Start/End: Complemental strand, 14550170 - 14549979
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| ||||||||| ||||||| || || |||||||||| |||| |||||||||||||  || | |||||| || |||| |||   |||  | |||||    
T  14550170 ctcacatttttattgaggtccatagggagggccttggaggttgaag-tgttgcatcatgttccgaagcatttggttattttcttcggatatgcggttgcc 14550072  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    || ||||||||  ||||||||||||   | |||||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  14550071 ccgtaggacattatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 14549979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 263 - 454
Target Start/End: Complemental strand, 18286699 - 18286508
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| ||||||||| ||||||| || || |||||||||| |||| |||||||||||||  |  | |||||| || |||| |||   |||  | |||||    
T  18286699 ctcacatttttattgaggtccatagggagggccttggaggttgaag-tgttgcatcatgttccaaagcatttggttattttcttcggatatgcggttgcc 18286601  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    || ||||||||| ||||||||||||   | |||||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  18286600 ccgtaggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 18286508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 263 - 454
Target Start/End: Original strand, 16466755 - 16466946
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| ||||||||| ||||||| || || || ||||||| |||| |||||||||||||  || | |||||| || |||| |||   |||  | |||||    
T  16466755 ctcacatttttattgaggtccatagggagggccatggaggttgaag-tgttgcatcatgtgccgaagcatttggttattttcttcggatatgcggttgcc 16466853  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    || ||||||||| ||||||||||||   | |||||||| ||| |||||||||||||||| | | || || || |||||||||||| |||||||    
T  16466854 ccgtaggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctctgtacctcggtttgcatccatgccca 16466946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 274 - 454
Target Start/End: Original strand, 48803010 - 48803190
Alignment:
Q  274 attgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggacatc 373  Q
    ||||| ||||||| || |||||||||||||| |  |||||||||||||  || | ||||||||| || | |||  | ||  | ||||||| ||| |||||    
T  48803010 attgaggtccatagggaggaccttggaggtggaagtgttgcatcatgttccgaagcatttgattattctcttcggtgatgcggttgccccgtagaacatc 48803109  T
Q  374 gtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
     ||||||||||||   | |||||||| ||| |||||||||||||||| | | ||||| || || ||||||||| |||||||    
T  48803110 atttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 48803190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 4311972 - 4311905
Alignment:
Q  128 aacactacgactaaagacaatttattaggctccccca-cacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||| ||||  ||||| ||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  4311972 aacactatgactctagacactttattaggctcccccaacacttaggataagcattgtcctcgatgatt 4311905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 263 - 454
Target Start/End: Complemental strand, 13657007 - 13656816
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||| ||||||||| ||||||| || |||||||||||||| |  |||| ||||||||  || | |||||| || || | |||   |||  | |||||     
T  13657007 ctcacatttttattgaggtccatagggaggaccttggaggtggaagtgttccatcatgttccgaagcatttggttattctcttcggatatgcggttgcct 13656908  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    ||||||||||| || |||||||||   | |||||||| ||| |||||||| ||||||| | | ||||| || || ||||||||| |||||||    
T  13656907 cttaggacatcattccttagcccggataattcaacaccttgcctttgttgttcggtgcttatcctttgtacctcagtttgcatccatgccca 13656816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 4792393 - 4792437
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc 162  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||    
T  4792393 ggagtttggaaacactatgactcaagacactttattaggctcccc 4792437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 523 - 555
Target Start/End: Original strand, 14223114 - 14223146
Alignment:
Q  523 caccatcatcttgtacctgtgggttagtaccaa 555  Q
    |||||||||||||||||||||||||||||||||    
T  14223114 caccatcatcttgtacctgtgggttagtaccaa 14223146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 155
Target Start/End: Original strand, 8782968 - 8783005
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattag 155  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  8782968 ggagtttggaaacactacgactcaagacactttattag 8783005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 429
Target Start/End: Complemental strand, 13672837 - 13672765
Alignment:
Q  357 ttgccccttaggacatcgtttcttagccc-gatcatttcaacactttgtctttgttgctcggtgcatgttcttt 429  Q
    ||||||| ||||||||| ||||||||||| ||| ||| |||||| ||| |||||||||||||||| | ||||||    
T  13672837 ttgccccgtaggacatcatttcttagcccagataatt-caacaccttgcctttgttgctcggtgcttattcttt 13672765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 418; Significance: 0; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 418; E-Value: 0
Query Start/End: Original strand, 263 - 781
Target Start/End: Original strand, 22062640 - 22063168
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  22062640 ctcacaattttattgaagtccttaaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgtt--attcatttatttgattgccc 22062737  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22062738 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 22062837  T
Q  463 cattatagtttccaccggcttcttgttcatggtgt---tgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    ||||||||||||||||||||||||||| ||||||    | | |||||||||||||||||||||||||||||||         ||||||||||||||||||    
T  22062838 cattatagtttccaccggcttcttgttaatggtgcaagtttgcacctacctcctcttcatcaccaccatcatcaccatcattttgtacctgtgggttagt 22062937  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  22062938 accaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccatgcatgttgg 22063037  T
Q  651 taattgtgagtagggtcatgggctttaaggaatgacaaagtagtataaaagtttggataatagttctcatctatcctcttgatcccttgattcacactca 750  Q
    ||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  22063038 taattgtgagtagagtcatggtttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttgatcccttgattcatactca 22063137  T
Q  751 ccccaaacttcttagcaataaaagtgatgat 781  Q
    |||||||||||||||||||||||||||||||    
T  22063138 ccccaaacttcttagcaataaaagtgatgat 22063168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 263 - 671
Target Start/End: Original strand, 18188700 - 18189116
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18188700 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatttgagtgccc 18188799  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    ||||| |||||||||||||||    
T  18188800 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcg----gcatccatgcccaccgttcat 18188895  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    |||||| ||||||||||||| |||||| || |||    | | ||||||||||||| |||||||||||||||||          |||||||||||||||||    
T  18188896 cattatggtttccaccggctacttgttaattgtgcaagtttgcacctacctcctcgtcatcaccaccatcatcaccatcattgtgtacctgtgggttagt 18188995  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
     |||||||| | ||| ||||| |||||||||||||||||| | ||||||||||||||||||||||| ||||||||  || ||| |||||| |||||||||    
T  18188996 gccaacataaaccaagttttctaccacctccggattagtattatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattgg 18189095  T
Q  651 taattgtgagtagggtcatgg 671  Q
    |||||||||| ||||||||||    
T  18189096 taattgtgagaagggtcatgg 18189116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 325 - 781
Target Start/End: Original strand, 19586777 - 19587222
Alignment:
Q  325 ggaacatttgattgttttattcatttatttgattgccccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgt 424  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||| ||||||||| |    
T  19586777 ggaacatttgattgttt-attcatttattcgattgccccttaggacatcgtttcttagcccggccatttcaacaccttgtctttgttgttcggtgcatat 19586875  T
Q  425 tctttgaacttcggtttgcatcaatgcccaccgttcatcattatagtttccaccggcttcttgttcatggtgttgtacacctacctcctcttcatcacca 524  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||     
T  19586876 tctttgaacttcggtttgcatccatgcccaccgttcatcattatattttcca-cggcttcttgttcatggtgttgtgcacctacctcctcttcatcaccc 19586974  T
Q  525 ccatcatcttgtacctgtgggttagtaccaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattag 624  Q
    |||||||||||||||||||||||| |||||||||| | ||||||||||||||||||| |               ||||||||||||||||||||||||||    
T  19586975 ccatcatcttgtacctgtgggttaataccaacataaatcaaattttccaccacctccag---------------attaggtagaataatcaaacaattag 19587059  T
Q  625 ctctaatgattctccattcatattggtaattgtgagtagggtcatgggctttaaggaatgacaaagt------agtataaaagtttggataatagttctc 718  Q
    ||||||| ||||||| || |||||||||||||| ||||||  |||||| | ||||||| ||||||||      |||||| |||| | |||||||||||      
T  19587060 ctctaataattctccgtttatattggtaattgtaagtaggtccatgggttctaaggaaggacaaagtagtgagagtatataagtgtagataatagttcct 19587159  T
Q  719 atctatcctcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat 781  Q
     ||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||    
T  19587160 ctctatcctcttgatcccttgattcagactcaccccaaacttcctagcaataaaggtgatgat 19587222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 263 - 660
Target Start/End: Complemental strand, 17818603 - 17818194
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| |||||    
T  17818603 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcagaacatttgatttttttattcatttatttgagtgccc 17818504  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||    
T  17818503 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtacatgttctttgaacttcagtttgcatccatgcacaccgttcat 17818404  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    |||||||||||||||||||| |||||| ||||||    | | |||||||||||||||||||||||||||||||          |||||||||||||||||    
T  17818403 cattatagtttccaccggctacttgttaatggtgcaagtttgcacctacctcctcttcatcaccaccatcatcaccatcattgtgtacctgtgggttagt 17818304  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
     |||||||| | ||| ||||| ||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || ||| |||||| |||||||||    
T  17818303 gccaacataaaccaagttttctaccacctacggattagtaatatctgaattaggtagaataatcaagaaattagcattattgactctccactcatattgg 17818204  T
Q  651 taattgtgag 660  Q
    ||||||||||    
T  17818203 taattgtgag 17818194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 263 - 671
Target Start/End: Complemental strand, 18853104 - 18852688
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  18853104 ctcacaattttattgaagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcagaacatttgattgttttattcatttatttaattgccc 18853005  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||| |||||||||||| |||||||||| |||||||||||||||    
T  18853004 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttattgctcggtacatattctttgaactttggtttgcatccatgcccaccgttcat 18852905  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcacc---------accatcatcttgtacctgtgggttagt 550  Q
    |||||| |||||||||||||||||||| ||||||    | | ||||||||||||||||||||||         |||||||| ||||||||||||||||||    
T  18852904 cattatggtttccaccggcttcttgttaatggtgcaagtttgcacctacctcctcttcatcaccaccatcattaccatcattttgtacctgtgggttagt 18852805  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
     ||||||||    |||||||| |||| ||||||||||||||| || |||||||||||||||||| || || || |  || | | |||||| |||||||||    
T  18852804 gccaacata---aaaattttctaccatctccggattagtaatatctgaattaggtagaataatc-aagaaataacattatttactctccactcatattgg 18852709  T
Q  651 taattgtgagtagggtcatgg 671  Q
    |||||||||| |||| |||||    
T  18852708 taattgtgagaagggccatgg 18852688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 264 - 687
Target Start/End: Original strand, 23518879 - 23519314
Alignment:
Q  264 tcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcccc 363  Q
    ||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||  |||| ||| |||| |||  | || ||||||| ||    
T  23518879 tcacaattttattgaggtccataaggtggaccttgtaggtgaagttgttgcatcatgttccggagaattttattattttcttcggtcatgtgattgctcc 23518978  T
Q  364 ttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcatc 463  Q
    || ||||||| |||||||||| |   |||||||||| ||||||||||| |||||||| | ||||||||||||||||||||||| ||||||||| | ||||    
T  23518979 tttggacatcatttcttagcctggagatttcaacaccttgtctttgttactcggtgcttattctttgaacttcggtttgcatccatgcccaccatacatc 23519078  T
Q  464 attatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcac---------caccatcatcttgtacctgtgggttagta 551  Q
    ||||||||| |||||| |||||||||||| |||    ||| ||||||||||||  |||||||         |||||||||| |||||| ||||||||||     
T  23519079 attatagttcccaccgacttcttgttcatcgtgcaagtgtgcacctacctccttatcatcaccaccatcatcaccatcatcatgtacccgtgggttagtt 23519178  T
Q  552 ccaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggt 651  Q
    |||||||| |||||||||||||||| |||||||||||| |||||| ||| |||||||||||||||||||||||| ||| | | | |||   |||||||||    
T  23519179 ccaacataaagcaaattttccaccatctccggattagttatgtccaaataaggtagaataatcaaacaattagccctatttactttccgcacatattggt 23519278  T
Q  652 aattgtgagtagggtcatgggctttaaggaatgaca 687  Q
    | ||||||| ||||||||||| | ||||||| ||||    
T  23519279 agttgtgagaagggtcatgggttataaggaaagaca 23519314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 274 - 575
Target Start/End: Complemental strand, 25966707 - 25966401
Alignment:
Q  274 attgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaa-catttgattgttttattcatttatttgattgccccttaggacat 372  Q
    ||||| |||||||||| ||||||||||||||||  || | |||||||| || ||| |||||| || |||| |||  | ||  | ||||| |||| |||||    
T  25966707 attgaggtccataaggaggaccttggaggtgaatttgctccatcatgt-tctgaagcatttggttattttcttcggtcatgcggttgcctcttatgacat 25966609  T
Q  373 cgtttcttagccc-gatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcatcattatagt 471  Q
    | ||||||||||| ||| ||| |||||| |||||||||||||||||||| | | || | |||||| ||||||||| |||| || | ||||| || |||||    
T  25966608 catttcttagcccagataatt-caacaccttgtctttgttgctcggtgcttatcctctcaacttcagtttgcatccatgctcatctttcattatcatagt 25966510  T
Q  472 ttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatcttgt--acctgtgggttagtaccaacatacagcaaa 566  Q
    | ||| |||||||||||||||||||    ||| ||||| ||||||||||||||| ||||||||||| |   ||| |||||||||||||||||| || |||    
T  25966509 taccaacggcttcttgttcatggtgcaagtgtgcaccttcctcctcttcatcactaccatcatcttcttgtcctatgggttagtaccaacataaagtaaa 25966410  T
Q  567 ttttccacc 575  Q
    |||| ||||    
T  25966409 tttttcacc 25966401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 15698796 - 15698719
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  15698796 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 15698719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 20169484 - 20169407
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  20169484 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 20169407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 21561403 - 21561480
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21561403 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 21561480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 22166524 - 22166601
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22166524 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 22166601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 22243053 - 22242976
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  22243053 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 22242976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 18853256 - 18853176
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18853256 ggagtttggaaacactacgactcaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 18853176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 29594942 - 29594867
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatga 192  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  29594942 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatga 29594867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 11218867 - 11218790
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11218867 ggagtttggaaacactacgacaaaagacactttattaggcttcccccacacttaggagaagcattgtcctcaatgatt 11218790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 18011107 - 18011030
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  18011107 ggagtttgaaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 18011030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 18447458 - 18447381
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  18447458 ggagtttggaaacactacgactcaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 18447381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 20017203 - 20017280
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||    
T  20017203 ggagtttggaaacactacgactaaagacactttattaggctccccccaaacttaggagaagcattgtcctcaatgatt 20017280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 22062479 - 22062559
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||||||||||||  |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22062479 ggagtttggaaacactacgactattgacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 22062559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 18188547 - 18188628
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct--cccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||||||||||| |||||| |||||||||||  ||||||||| |||||||||||||||||||||||||||||    
T  18188547 ggagtttggaaacactacgactcaagacactttattaggctcccccccacacgtaggagaagcattgtcctcaatgatttaa 18188628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 25625008 - 25624931
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||||||||||||||| |||||| ||||||| |||||||| |||||||||||||||||||||||||||||||    
T  25625008 ggagtttggaaacactacgactcaagacactttattaagctccccccacacttaggagaagcattgtcctcaatgatt 25624931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 25632319 - 25632399
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||||||||||| |||||| ||||||||||| ||||||||||| |||||||||||||||||||||| ||||    
T  25632319 ggagtttggaaacactacgactcaagacactttattaggctccccccacacttgggagaagcattgtcctcaatgaattaa 25632399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 22768093 - 22768170
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||||| ||||||||||  |||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22768093 ggagtttggaaatactacgactactgacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 22768170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 24856219 - 24856296
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||||||||||||||||  | || ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24856219 ggagtttggaaacactacgactactgtcactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 24856296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 15850956 - 15851036
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||||||||||||  || | ||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  15850956 ggagtttggaaacactacgactattgatactttattatgctccccccacacttaggagaagcattgtcctcaatgatttaa 15851036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 19967010 - 19967086
Alignment:
Q  122 tttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||||||  | |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19967010 tttggaaacactacgacacacgacactttattaggctcccctcacacttaggagaagcattgtcctcaatgatttaa 19967086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 390 - 455
Target Start/End: Complemental strand, 29685511 - 29685446
Alignment:
Q  390 atttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccac 455  Q
    |||||||||| |||||||||||||||||||  | | ||||||||||||||||||||| ||||||||    
T  29685511 atttcaacaccttgtctttgttgctcggtgattatcctttgaacttcggtttgcatccatgcccac 29685446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 531 - 578
Target Start/End: Complemental strand, 29685340 - 29685293
Alignment:
Q  531 tcttgtacctgtgggttagtaccaacatacagcaaattttccaccacc 578  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  29685340 tcttgtacctgtgggttagtactaacataaagcaaattttccaccacc 29685293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 454
Target Start/End: Original strand, 24856384 - 24856575
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||| ||||||||| ||||||| || || || || ||||| |  |||||||||||||  || | |||||| || |||| |||   |||  | ||||||    
T  24856384 ctcacatttttattgaggtccatagggagggccctgaaggtgtaagtgttgcatcatgttccgaagcatttggttattttcttcggatatgcggttgccc 24856483  T
Q  363 cttaggacatcgtttcttagccc-gatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    |  |||||||| ||||||||||| ||| ||| |||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  24856484 cgaaggacatcatttcttagcccagataatt-caacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 24856575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 20079706 - 20079668
Alignment:
Q  159 cccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  20079706 cccccacacttgggtgaagcattgtcctcaatgatttaa 20079668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 409; Significance: 0; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 263 - 781
Target Start/End: Complemental strand, 6813949 - 6813419
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6813949 ctcacaattttattgaagtccttaaagtggaccttggaggtgaagatgttgcatcatgtatcagaacatttgattgttttattcatttatttgattgccc 6813850  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  6813849 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcattaatgcccaccattcat 6813750  T
Q  463 cattatagtttccaccggcttcttgttcatggtgt---tgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    ||||||||||||||||||||||||||| ||||||    | | ||||||||||||||||||||||||||||||          ||||||||||||||||||    
T  6813749 cattatagtttccaccggcttcttgttaatggtgcaagtttgcacctacctcctcttcatcaccaccatcattaccatcattttgtacctgtgggttagt 6813650  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6813649 accaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccatgcatattgg 6813550  T
Q  651 taattgtgagtagggtcatgggctttaaggaatgacaaagtagtataaaagtttggataatagttctcatctatcctcttgatcccttgattcacactca 750  Q
    ||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  6813549 taattgtgagtagagtcatggtttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttgatcccttgattcatactca 6813450  T
Q  751 ccccaaacttcttagcaataaaagtgatgat 781  Q
    || ||||||||||||||||||||||||||||    
T  6813449 cctcaaacttcttagcaataaaagtgatgat 6813419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 263 - 784
Target Start/End: Original strand, 12777631 - 12778170
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  12777631 ctcacaattttattgaagtccataaggtggaccttggaggtgaaggtgttgtatcatgtatcggaacatttgattgtcttatgcatttatttgattgccc 12777730  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||| ||||||||||||| ||||| ||||||||||| | || |||||||||| |||||| || ||||||||| |||||||||| |||||||||||| ||    
T  12777731 cttagcacatcgtttcttatcccgaccatttcaacacctagtttttgttgctcagtgcatattatttgaactttggtttgcatccatgcccaccgtttat 12777830  T
Q  463 cattatagtttccaccggcttcttgttcatggtgttgtacacctacctcctcttcatcac------------caccatcatcttgtacctgtgggttagt 550  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||            ||||||||||||||||||||||||||||    
T  12777831 cattatagtttccaccggctttttgttcatggtgttgtgcacctacctcctcttcatcaccaccatcatcatcaccatcatcttgtacctgtgggttagt 12777930  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||     
T  12777931 accaacataaagcaaattttccaccacctccgaattagtaatgtccgaattaggtagaataatcaaacaattagttctaataattctccattcatattga 12778030  T
Q  651 taattgtgagtagggtcatgggctttaaggaatgacaaagt------agtataaaagtttggataatagttctcatctatcctcttgatcccttgattca 744  Q
    |||||||||||||||||||||| | ||||||| ||||||||      |||| | |||||||||||||| || || |||||||||||||||||||||||||    
T  12778031 taattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtaaataagtttggataataattttcctctatcctcttgatcccttgattca 12778130  T
Q  745 cactcaccccaaacttcttagcaataaaagtgatgatgtc 784  Q
    ||||||||| |||| ||||||||||||||| |||||||||    
T  12778131 cactcaccctaaacctcttagcaataaaagggatgatgtc 12778170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 263 - 670
Target Start/End: Complemental strand, 20562424 - 20562017
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20562424 ctcacaattttattgaagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatttgagtgccc 20562325  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20562324 cttaggacatcatttcttagcccgatcattttaacaccttgtctttattgctcggtgcatgttctttgaactttggtttgcatccatgcccaccgttcat 20562225  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatcttgtacctgtgggttagtaccaacata 559  Q
    ||||||||||||||||||||||||||| ||||||   || | ||||||||||||||||||   |||||||||  ||||||||||||||||| |||||| |    
T  20562224 cattatagtttccaccggcttcttgttaatggtgcaattttgcacctacctcctcttcat---caccatcattgtgtacctgtgggttagtgccaacaca 20562128  T
Q  560 cagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtga 659  Q
     | | | ||||| |||||||||| ||||||||| || ||||||||||||||||||||  ||||||   || ||| |||||| ||||||||||||||||||    
T  20562127 aacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattgactctccactcatattggtaattgtga 20562028  T
Q  660 gtagggtcatg 670  Q
    | |||| ||||    
T  20562027 gaagggccatg 20562017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 263 - 670
Target Start/End: Complemental strand, 20564732 - 20564325
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20564732 ctcacaattttattgaagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatttgagtgccc 20564633  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20564632 cttaggacatcatttcttagcccgatcattttaacaccttgtctttattgctcggtgcatgttctttgaactttggtttgcatccatgcccaccgttcat 20564533  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatcttgtacctgtgggttagtaccaacata 559  Q
    ||||||||||||||||||||||||||| ||||||   || | ||||||||||||||||||   |||||||||  ||||||||||||||||| |||||| |    
T  20564532 cattatagtttccaccggcttcttgttaatggtgcaattttgcacctacctcctcttcat---caccatcattgtgtacctgtgggttagtgccaacaca 20564436  T
Q  560 cagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtga 659  Q
     | | | ||||| |||||||||| ||||||||| || ||||||||||||||||||||  ||||||   || ||| |||||| ||||||||||||||||||    
T  20564435 aacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattgactctccactcatattggtaattgtga 20564336  T
Q  660 gtagggtcatg 670  Q
    | |||| ||||    
T  20564335 gaagggccatg 20564325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 263 - 670
Target Start/End: Complemental strand, 20560116 - 20559709
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20560116 ctcacaattttattgaagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatttgagtgccc 20560017  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20560016 cttaggacatcatttcttagcccgatcattttaacaccttgtctttattgctcggtgcatgttctttgaactttggtttgcatccatgcccaccgttcat 20559917  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatcttgtacctgtgggttagtaccaacata 559  Q
    ||||||||||||||||||||||||||| ||||||   || | ||||||||||||||||||   |||||||||  |||| |||||||||||| |||||| |    
T  20559916 cattatagtttccaccggcttcttgttaatggtgcaattttgcacctacctcctcttcat---caccatcattgtgtatctgtgggttagtgccaacaca 20559820  T
Q  560 cagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtga 659  Q
     | | | ||||| |||||||||| ||||||||| || ||||||||||||||||||||  ||||||   || ||| |||||| ||||||||||||||||||    
T  20559819 aacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattgactctccactcatattggtaattgtga 20559720  T
Q  660 gtagggtcatg 670  Q
    | |||| ||||    
T  20559719 gaagggccatg 20559709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 263 - 671
Target Start/End: Original strand, 9362084 - 9362501
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9362084 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatttgagtgccc 9362183  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  9362184 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttattgctcggtgcatgttctttgaactttggtttgcatccatgcccaccgttcat 9362283  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    |||||||||| |||||||||||||||| ||||||    | | |||||||||||||||||| ||||||||||||          |||||||||||||||||    
T  9362284 cattatagttgccaccggcttcttgttaatggtgcaagtttgcacctacctcctcttcattaccaccatcatcaccatcattgtgtacctgtgggttagt 9362383  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
     ||||||||    || ||||| ||||||| |||||||||||| |  ||||||||||||||||||||  |||||||  || ||| |||||| |||||||||    
T  9362384 gccaacata---aaagttttctaccaccttcggattagtaatatttgaattaggtagaataatcaagaaattagcattattgactctccactcatattgg 9362480  T
Q  651 taattgtgagtagggtcatgg 671  Q
      |||||||| |||| |||||    
T  9362481 ggattgtgagaagggccatgg 9362501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 424 - 781
Target Start/End: Complemental strand, 15024621 - 15024254
Alignment:
Q  424 ttctttgaacttcggtttgcatcaatgc----ccaccgttcatcattatagtttccaccggcttcttgttcatggtgttgtacacctacctcctcttcat 519  Q
    ||||||||||||||||||||||| || |    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15024621 ttctttgaacttcggtttgcatcgatccatacccaccgttcatcattatagtttccaccggcttcttgttcatggtgttgtgcacctacctcctcttcat 15024522  T
Q  520 caccaccatcatcttgtacctgtgggttagtaccaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaaca 619  Q
    |||| |||||||||||||| ||||| ||||||||||||||  |||||||||||||||||||||||||||| ||||| | ||||||||||||||| |||||    
T  15024521 cacctccatcatcttgtacatgtggattagtaccaacataatgcaaattttccaccacctccggattagttatgtctggattaggtagaataataaaaca 15024422  T
Q  620 attagctctaatgattctccattcatattggtaattgtgagtagggtcatgggctttaaggaatgacaaagt------agtataaaagtttggataatag 713  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||      |||||| |||| | ||||||||    
T  15024421 attagctctattaattctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatag 15024322  T
Q  714 ttctcatctatcctcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat 781  Q
    | | | |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  15024321 tacccctctatcctcttgatcccttgattcacactcaccccaaactttctagcaataaaagtgatgat 15024254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 263 - 671
Target Start/End: Original strand, 13089934 - 13090351
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13089934 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatttgagtgccc 13090033  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    |||||||||||||||||||||||| |||||||||||| |||||||| ||||||||| |||||||||||||||| |||||||||| |||||||||||||||    
T  13090034 cttaggacatcgtttcttagcccggtcatttcaacaccttgtctttattgctcggttcatgttctttgaactttggtttgcatcgatgcccaccgttcat 13090133  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
     |||||||||||||||||||||||||| ||||||    | | |||||||||||||||||| ||||||||||||          |||||||||||||||||    
T  13090134 tattatagtttccaccggcttcttgttaatggtgcaaatttgcacctacctcctcttcatgaccaccatcatcaccatcattgtgtacctgtgggttagt 13090233  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
     ||||||||    || ||||| ||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || ||| || ||| |||||||||    
T  13090234 gccaacata---aaagttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattgactcaccactcatattgg 13090330  T
Q  651 taattgtgagtagggtcatgg 671  Q
     ||||||||| |||| |||||    
T  13090331 gaattgtgagaagggccatgg 13090351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 263 - 671
Target Start/End: Complemental strand, 13096794 - 13096380
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||||||||||||||| |||||||||||||    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13096794 ctcacaattttattgaagtccataaggtagaccttggaggtgg---tgttccatcatgtatcggaacatttgattgttttattcatttatttgagtgccc 13096698  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  13096697 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttattgctcggtgcatgttctttgaactttggtttgcatccatgcccaccgttcat 13096598  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    ||||||||||||||||||||||||||| ||||||    | | |||||||||||||||||||||||||||||||          |||||||||||||||||    
T  13096597 cattatagtttccaccggcttcttgttaatggtgcaagtttgcacctacctcctcttcatcaccaccatcatcaccatcattgtgtacctgtgggttagt 13096498  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
      |||||||    || ||||| ||||||| |||||||||||| || ||||||||||||||||||||  ||||||   || ||| |||||| |||| ||||    
T  13096497 gtcaacata---aaagttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagaattattgactctccactcatgttgg 13096401  T
Q  651 taattgtgagtagggtcatgg 671  Q
     ||||||||| |||| |||||    
T  13096400 gaattgtgagaagggccatgg 13096380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 283 - 579
Target Start/End: Original strand, 3246663 - 3246968
Alignment:
Q  283 cataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggacatcgtttcttag 382  Q
    ||||||||||||||||||||||||| ||||||||||||| || || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3246663 cataaggtggaccttggaggtgaaggtgttgcatcatgtttcagagcatttgattgttttattcatttattcgattgccccttaggacatcgtttcttag 3246762  T
Q  383 cccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcatcattatagtttccaccggct 482  Q
    |||||| |||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||    
T  3246763 cccgattatttcaacaccttgtctttgttgctcggtgcatattcgttgaacttcggtttgcatgcatgcccaccgttcatcattatagtttccatcggct 3246862  T
Q  483 tcttgttcatggtgttgtacacctacctcctcttcatcac---------caccatcatcttgtacctgtgggttagtaccaacatacagcaaattttcca 573  Q
    |||||||||||||| ||| |||||||||||||||||||||         |||||||||||||||||||||||||||||| || ||| | |||||||||||    
T  3246863 tcttgttcatggtgatgtgcacctacctcctcttcatcaccaccatcatcaccatcatcttgtacctgtgggttagtacaaaaataaaacaaattttcca 3246962  T
Q  574 ccacct 579  Q
    ||||||    
T  3246963 ccacct 3246968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 6814110 - 6814030
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6814110 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 6814030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 13096939 - 13096859
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13096939 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 13096859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 12777494 - 12777573
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgattta 196  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12777494 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgattta 12777573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 3340179 - 3340256
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3340179 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 3340256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 4369930 - 4369853
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  4369930 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 4369853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 7599595 - 7599518
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  7599595 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 7599518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 10146251 - 10146174
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  10146251 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 10146174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 10161151 - 10161228
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10161151 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 10161228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 10603446 - 10603523
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10603446 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 10603523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 13188392 - 13188469
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13188392 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 13188469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 13505481 - 13505558
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13505481 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 13505558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 15557920 - 15557997
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15557920 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 15557997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 15629931 - 15630008
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15629931 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 15630008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 15945871 - 15945794
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  15945871 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 15945794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 22165286 - 22165363
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22165286 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 22165363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 9361943 - 9362023
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  9361943 ggagtttggaaacactacgactaaagacactttattaggccccccccacacttaggagaagcattgtcctcaatgatttaa 9362023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 11946654 - 11946574
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11946654 ggagtttggaaacattacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 11946574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 13089782 - 13089862
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  13089782 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaagagaagcattgtcctcaatgatttaa 13089862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 20560268 - 20560188
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20560268 ggagtttggaaacagtacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 20560188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 20562576 - 20562496
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20562576 ggagtttggaaacagtacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 20562496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 20564884 - 20564804
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20564884 ggagtttggaaacagtacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 20564804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 12194467 - 12194541
Alignment:
Q  121 gtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12194467 gtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 12194541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 11866036 - 11865959
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  11866036 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattatcctcaatgatt 11865959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 13137144 - 13137221
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13137144 ggagtttgaaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 13137221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 15644329 - 15644252
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||    
T  15644329 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgccctcaatgatt 15644252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 16449709 - 16449786
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  16449709 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcatcaatgatt 16449786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 16654970 - 16654893
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  16654970 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaatcattgtcctcaatgatt 16654893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 10547845 - 10547925
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  10547845 ggagtttggaaatactacgactaaagacactttattaggctccccccacacttaggagaagcattttcctcaatgatttaa 10547925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 12188053 - 12188127
Alignment:
Q  121 gtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatt 194  Q
    |||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12188053 gtttagaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 12188127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 13694142 - 13694064
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttatt-aggctccccc-acacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||    
T  13694142 ggagtttggaaacactacgactaaagacactttatttaggctccccccacacttaggagaagcattgtcctcaatgatt 13694064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 13689896 - 13689819
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||| ||| |||||||||||||||||||||||    
T  13689896 ggagtttggaaacactacgactaaagacactttattaggctccccccacaattacgagaagcattgtcctcaatgatt 13689819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 13196413 - 13196491
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttatt-aggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||||||||||| |||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||    
T  13196413 ggagtttggaaacactactactaaagacactttatttaggctcgccccacacttaggagaagcattgtcctcaatgatt 13196491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 16374455 - 16374531
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||||||||||||||||  |||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16374455 ggagtttggaaacactacgactat-gacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 16374531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 3246480 - 3246555
Alignment:
Q  119 gagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3246480 gagtttggaa-cactacgactctagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 3246555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 263 - 454
Target Start/End: Complemental strand, 7599430 - 7599239
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| ||||||||| ||||||| || || |||||||||| |||| |||||||||||||  || | |||||| || |||| |||   |||  | |||||    
T  7599430 ctcacatttttattgaggtccatagggagggccttggaggttgaag-tgttgcatcatgttccgaagcatttggttattttcttcggatatgcggttgcc 7599332  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    || ||||||||| ||||||||||||   | |||||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  7599331 ccgtaggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 7599239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 263 - 462
Target Start/End: Complemental strand, 10146085 - 10145886
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||| ||||||||| ||||||| || || || || ||||| | ||||||||||||||  || | |||||| || |||| |||   |||  | ||||||    
T  10146085 ctcacatttttattgaggtccatagggagggccctgaaggtgtaaatgttgcatcatgttccgaagcatttggttattttcttcggatatgcggttgccc 10145986  T
Q  363 cttaggacatcgtttcttagccc-gatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttca 461  Q
    | ||||||||| ||||||||||| ||| ||| |||||| ||| |||||||||||||||| | | ||||| || |||||||||||| ||||||| ||||||    
T  10145985 cgtaggacatcatttcttagcccagataatt-caacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatcgttca 10145887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 13064208 - 13064132
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccca-cacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||| |||||| |||||||||| ||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  13064208 ggagtttggaa-cactaccactaaagacactttattaggctcccccctcacttaggagaagcattgtcctccatgatt 13064132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 17387003 - 17386927
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||| ||||| ||||||||| | |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  17387003 ggagtttggaa-cactatgactaaagaaactttattaggctccccccacacttaggaaaagcattgtcctcaatgatt 17386927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 263 - 462
Target Start/End: Original strand, 13137309 - 13137508
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| ||||||||| ||||||| || || |||||||||| |||| |||||||||||||  || | |||||| || |||| ||    |||  | |||||    
T  13137309 ctcacatttttattgaggtccatagggagggccttggaggttgaag-tgttgcatcatgttccgaagcatttggttattttctttggatatgcggttgcc 13137407  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttca 461  Q
    |  ||||||||| ||||||||||||   | |||||||| ||| |||||||||||||||| | | ||||| || |||||||||||| ||||||| ||||||    
T  13137408 ctgtaggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatcgttca 13137507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 1991950 - 1991889
Alignment:
Q  132 ctacgactaaagacaatttattaggctcccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||| |||||| |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  1991950 ctacgactcaagacactttattaggc-cccccacacttgggagaagcattgtcctcaatgatt 1991889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 438 - 496
Target Start/End: Complemental strand, 20154938 - 20154880
Alignment:
Q  438 gtttgcatcaatgcccaccgttcatcattatagtttccaccggcttcttgttcatggtg 496  Q
    ||||||||  ||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  20154938 gtttgcatacatgcccaccgttcatcattatagtttccaccagcttcttgttaatggtg 20154880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 271 - 454
Target Start/End: Original strand, 13188565 - 13188748
Alignment:
Q  271 tttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggac 370  Q
    |||||||| ||||||| || || || || ||||| | ||||||||||||||  || | |||||| || |||| |||   |||  | ||||||| ||||||    
T  13188565 tttattgaggtccatagggagggccctgaaggtgtaaatgttgcatcatgttccgaagcatttggttattttcttcggatatgcggttgccccgtaggac 13188664  T
Q  371 atcgtttcttagccc-gatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    ||| ||||||||||| ||| ||| |||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  13188665 atcatttcttagcccagataatt-caacaccttgcctttgttgctcggtgcctatcctttgtacctcggtttgcatccatgccca 13188748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 263 - 454
Target Start/End: Original strand, 15630096 - 15630287
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| ||||||||| ||||||| || || |||||||||| |||| |||||||||||||  || | |||||| || |||| |||   |||  | |||||    
T  15630096 ctcacatttttattgaggtccatagggagggccttggaggttgaag-tgttgcatcatgttccgaagcatttggtttttttcttcggatatgcggttgcc 15630194  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    || ||||||||| |||||| ||| |   | |||||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  15630195 ccgtaggacatcatttctttgcctggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 15630287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 357 - 454
Target Start/End: Original strand, 16374713 - 16374810
Alignment:
Q  357 ttgccccttaggacatcgtttcttagccc-gatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    ||||||| ||||||||| ||||||||||| ||| ||| |||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  16374713 ttgccccgtaggacatcatttcttagcccagataatt-caacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 16374810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 454
Target Start/End: Original strand, 12188215 - 12188406
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||| ||||||||| ||||||| || || || || ||||| | ||||||||||||||  || | |||||| || |||| |||   |||  | ||||||    
T  12188215 ctcacatttttattgaggtccatagggagggccctgaaggtgtaaatgttgcatcatgttccgaagcatttggttattttcttcggatatgcggttgccc 12188314  T
Q  363 cttaggacatcgtttcttagccc-gatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    | ||||||||| ||||||||||| ||| |  ||||||| ||| |||||||||||||| | | | ||||| || |||||||||||| |||||||    
T  12188315 cgtaggacatcatttcttagcccagat-aagtcaacaccttgcctttgttgctcggttcttatcctttgtacctcggtttgcatccatgccca 12188406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 462
Target Start/End: Original strand, 12194629 - 12194828
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||| ||||||||| ||||||| || |  || || ||||| | ||||||||||||||  || | |||||| || |||| |||   |||  | ||||||    
T  12194629 ctcacatttttattgaggtccatagggagagccctgaaggtgtaaatgttgcatcatgttccgaagcatttggttattttcttcggatatgcggttgccc 12194728  T
Q  363 cttaggacatcgtttcttagccc-gatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttca 461  Q
    | ||||||||| ||||||||||| ||| |  ||||||| ||| |||||||||||||| | | | ||||| || |||||||||||| ||||||||| ||||    
T  12194729 cgtaggacatcatttcttagcccagat-aagtcaacaccttgcctttgttgctcggttcttatcctttgtacctcggtttgcatccatgcccacctttca 12194827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 454
Target Start/End: Original strand, 13196569 - 13196760
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaa-catttgattgttttattcatttatttgattgcc 361  Q
    |||||| |||||||||  |||||| || |||||||||||||| | |||||||||||||| || ||| |||||| || || | |||   |||  | |||||    
T  13196569 ctcacatttttattgagttccatagggaggaccttggaggtggaaatgttgcatcatgt-tctgaagcatttggttattctcttcggatatgcggttgcc 13196667  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
     ||||||||||| || ||||||| |   | |||||||| ||| |||||||||||||||| | | ||||| || || ||||||||| |||||||    
T  13196668 tcttaggacatcattccttagcctggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 13196760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 12161168 - 12161211
Alignment:
Q  120 agtttggaaacactacgactaaagacaatttattaggctccccc 163  Q
    ||||||||||||||||||||||||||  ||||||||||||||||    
T  12161168 agtttggaaacactacgactaaagaccctttattaggctccccc 12161211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 263 - 454
Target Start/End: Complemental strand, 13689741 - 13689550
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||| ||||||||| ||||||| || |||||||||||||| |  |||| ||||||||  || | |||||| || || | |||   |||  | |||||     
T  13689741 ctcacatttttattgaggtccatagggaggaccttggaggtggaagtgttccatcatgttccgaagcatttggttattctcttcggatatgcggttgcct 13689642  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    ||||||||||| || |||||||||   | |||||||| ||| |||||||| ||||||| | | ||||| || || ||||||||| |||||||    
T  13689641 cttaggacatcattccttagcccggataattcaacaccttgcctttgttgttcggtgcttatcctttgtacctcagtttgcatccatgccca 13689550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 454
Target Start/End: Original strand, 13505672 - 13505846
Alignment:
Q  280 gtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggacatcgtttct 379  Q
    ||||||| || ||||||||||||||||  || ||||||||||  || | |||||| ||||||| |||   |||  | ||||||||| ||||||| || ||    
T  13505672 gtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttgttttcttcggatatgcggttgcccctttggacatcattcct 13505771  T
Q  380 tagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    ||  || || | |||||||| ||| |||||||||||||||| | | ||||  || ||||||| |||| |||||||    
T  13505772 tattcccattaattcaacaccttgcctttgttgctcggtgcttatcctttcgacctcggttttcatccatgccca 13505846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 517 - 653
Target Start/End: Complemental strand, 20153598 - 20153465
Alignment:
Q  517 catcaccaccatcatcttgtacctgtgggttagtaccaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaa 616  Q
    ||||| |||||||||  ||||||||| ||||||| |||||||| |  || ||||| ||||||||| |||||| ||| || |||   ||||||||||||||    
T  20153598 catcatcaccatcattgtgtacctgtaggttagtgccaacataaacaaagttttctaccacctccagattaggaatatctgaa---ggtagaataatcaa 20153502  T
Q  617 acaattagctctaatgattctccattcatattggtaa 653  Q
      |||||||   | ||| |||||| ||||||||||||    
T  20153501 gaaattagcagcattgactctccactcatattggtaa 20153465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 37941619 - 37941556
Alignment:
Q  118 ggagtttggaaacactacgactaaagaca----atttattaggct-cccccacacttaggagaa 176  Q
    |||||||||||||||||||||||||||||     ||||||||||| ||||||||||||||||||    
T  37941619 ggagtttggaaacactacgactaaagacactttctttattaggctccccccacacttaggagaa 37941556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 372
Target Start/End: Complemental strand, 16654763 - 16654682
Alignment:
Q  291 ggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggacat 372  Q
    |||||||||||||||||||| ||||||||||  || | ||||||||| |||| |||   |||  ||||||||||||||||||    
T  16654763 ggaccttggaggtgaagatggtgcatcatgttccgaagcatttgattattttcttcggatatgcgattgccccttaggacat 16654682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 274 - 420
Target Start/End: Complemental strand, 15945678 - 15945532
Alignment:
Q  274 attgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggacatc 373  Q
    ||||| ||||||| || ||||||||||||||||  || ||||||||||  || | |||||| ||||||| |||   |||  | ||||||| | |||||||    
T  15945678 attgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttgttttcttcggatatgcggttgccccgttggacatc 15945579  T
Q  374 gtttcttagcccgatcatttcaacactttgtctttgttgctcggtgc 420  Q
     || ||||  || || | |||||||| ||| ||||||||||||||||    
T  15945578 attccttattcccattaattcaacaccttgcctttgttgctcggtgc 15945532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 403; Significance: 0; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 263 - 781
Target Start/End: Complemental strand, 20001385 - 20000852
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  20001385 ctcacaattttattgtagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcggaacattggattgtttgattcattcatttgattgccc 20001286  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20001285 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaactttggtttgcatccatgcccaccgttcat 20001186  T
Q  463 cattatagtttccaccggcttcttgttcatggtgttgtacacctacctcctcttcatcaccaccat------------catcttgtacctgtgggttagt 550  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||            ||||||||||||||||||||||    
T  20001185 cattatagtttccaccggctttttgttcatggtgttgtgcacctacctcctcttcatcaccaccatcatcatcaccatcatcttgtacctgtgggttagt 20001086  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20001085 accaacataaagcaaattttccaccacctccagattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 20000986  T
Q  651 taattgtgagtagggtcatgggctttaaggaatgacaaagt------agtataaaagtttggataatagttctcatctatcctcttgatcccttgattca 744  Q
    |||||||||||||||||||||| ||||||||||||||||||      ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20000985 taattgtgagtagggtcatgggttttaaggaatgacaaagtagtgagagtataaaagtttagataatagttctcatctatcctcttgatcccttgattca 20000886  T
Q  745 cactcaccccaaacttcttagcaataaaagtgatgat 781  Q
    |||||||||||||   |||||||||||||||||||||    
T  20000885 cactcaccccaaa---cttagcaataaaagtgatgat 20000852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 263 - 670
Target Start/End: Original strand, 20040196 - 20040615
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20040196 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcgaaacatttgattgttttattcatttatttgattgccc 20040295  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20040296 cttaggaaatcgtttcttagcctgatcatttcaacaccttgtctttattgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 20040395  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    ||||||||||||||||||||||||||| ||||||    | | |||||||||||||||||||||||||||||||          |||||||||||||||||    
T  20040396 cattatagtttccaccggcttcttgttaatggtgcaagtttgcacctacctcctcttcatcaccaccatcatcaccatcattgtgtacctgtgggttagt 20040495  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
     |||||||| | | | ||||| |||||||| ||||||||||| || ||||||||||||||||||||  ||||||   || ||| |||||| |||||||||    
T  20040496 gccaacataaacctagttttctaccacctctggattagtaatatctgaattaggtagaataatcaagaaattagtagtattgactctccactcatattgg 20040595  T
Q  651 taattgtgagtagggtcatg 670  Q
    |||||||||| |||| ||||    
T  20040596 taattgtgagaagggccatg 20040615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 263 - 670
Target Start/End: Complemental strand, 17619828 - 17619412
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17619828 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatttgactgccc 17619729  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||| |||||||||||||||    
T  17619728 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttattgctcggtgcatgttctttgaactttgatttgcatccatgcccaccgttcat 17619629  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    ||||||||||||||||||||||||||| ||||||    | | |||||||||||||||||||||||||||||||          |||||||||||||||||    
T  17619628 cattatagtttccaccggcttcttgttaatggtgcaagtttgcacctacctcctcttcatcaccaccatcatcaccatcattgtgtacctgtgggttagt 17619529  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
     ||||||||    || ||||| ||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || ||| |||||| |||||||||    
T  17619528 gccaacata---aaagttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattgactctccactcatattgg 17619432  T
Q  651 taattgtgagtagggtcatg 670  Q
     ||||||||| |||| ||||    
T  17619431 aaattgtgagaagggccatg 17619412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 263 - 672
Target Start/End: Original strand, 21854903 - 21855321
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||| |||||    
T  21854903 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcgaaacatttgattgttttattcgtttatttgagtgccc 21855002  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  21855003 cttaggacatcgtttcttagcccgatcatttcaacatcttgtctttattgctcggtgcatgttctttgaactttggtttgcatccatgcccaccgttcat 21855102  T
Q  463 cattatagtttccaccggcttcttgttcatggt----gttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttag 549  Q
    ||||||||||||||||||||||||||| |||||    ||| | |||||||||||||||||||||||||||||||          ||||||||| ||||||    
T  21855103 cattatagtttccaccggcttcttgttaatggtacaagtt-tgcacctacctcctcttcatcaccaccatcatcaccatcattgtgtacctgtaggttag 21855201  T
Q  550 taccaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattg 649  Q
    | ||||||||    || ||||| ||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || ||| |||||| ||||||||    
T  21855202 tgccaacata---aaagttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattgactctccactcatattg 21855298  T
Q  650 gtaattgtgagtagggtcatggg 672  Q
    ||||||||||| ||||| |||||    
T  21855299 gtaattgtgagaagggttatggg 21855321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 20001561 - 20001481
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20001561 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 20001481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 20711706 - 20711626
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20711706 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 20711626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 21854754 - 21854834
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21854754 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 21854834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 8313707 - 8313630
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  8313707 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 8313630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 8323826 - 8323903
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8323826 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 8323903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 16419585 - 16419662
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16419585 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 16419662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 19766791 - 19766714
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  19766791 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 19766714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 21099765 - 21099842
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21099765 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 21099842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 21381332 - 21381255
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  21381332 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 21381255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 21955315 - 21955238
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  21955315 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 21955238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 22101655 - 22101578
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  22101655 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 22101578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 23910680 - 23910603
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  23910680 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 23910603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 29333857 - 29333780
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  29333857 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 29333780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 19365270 - 19365190
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19365270 ggagttaggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 19365190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 20039963 - 20040043
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20039963 ggagttgggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 20040043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 22034512 - 22034589
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  22034512 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttagtagaagcattgtcctcaatgatt 22034589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 22100610 - 22100687
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22100610 ggagtttggaaacactacgaccaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 22100687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 22369205 - 22369128
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  22369205 ggagtttgggaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 22369128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 17619977 - 17619901
Alignment:
Q  122 tttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  17619977 tttggaaacactacgactaaagacactttattaggctccccacacacttaggagaagcattgtactcaatgatttaa 17619901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 452
Target Start/End: Original strand, 22034670 - 22034859
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| ||||||||| ||||||| || ||| ||||||||| |||| |||||||||||||  || | ||||||||| |||| |||   |||  | |||||    
T  22034670 ctcacatttttattgaggtccatagggaggaacttggaggttgaag-tgttgcatcatgttccgaagcatttgattattttcttcggatatgcggttgcc 22034768  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcc 452  Q
    |||||||||||| ||||||||||||   | |||||||| ||| |||||||||||||||| | ||||||| || |||||||||||| |||||    
T  22034769 ccttaggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttattctttgtacctcggtttgcatccatgcc 22034859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 21942412 - 21942488
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21942412 ggagtttggaa-cactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 21942488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 263 - 454
Target Start/End: Original strand, 22100765 - 22100956
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| ||||||||| ||||||| || ||||||||||||| |||| |||||||||||||  || | |||||| || |||| |||   |||  | |||||    
T  22100765 ctcacatttttattgaggtccatagggaggaccttggaggttgaag-tgttgcatcatgttccgaagcatttggttattttcttcggatatgcggttgcc 22100863  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    |||||||||||| ||||||||||||   | |||||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  22100864 ccttaggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 22100956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 11347910 - 11347988
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaattta-ttaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| |||||||||||||||||    
T  11347910 ggagtttggaaacactacgactaaagacactttatttaggctccccccacacttaggagaaacattgtcctcaatgatt 11347988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 263 - 454
Target Start/End: Complemental strand, 21955153 - 21954962
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| ||||||||| ||||||| || || |||||||||| |||| |||||||||||||  |  | |||||| || |||| |||   |||  | |||||    
T  21955153 ctcacatttttattgaggtccatagggagggccttggaggttgaag-tgttgcatcatgttcctaagcatttggttattttcttcggatatgcggttgcc 21955055  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    |||||||||||| ||||||||||||   | |||||||| |||||||||||||||||||| | | ||||| || |||||||| ||| |||||||    
T  21955054 ccttaggacatcatttcttagcccggataattcaacaccttgtctttgttgctcggtgcttatcctttgtacctcggtttggatccatgccca 21954962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 263 - 454
Target Start/End: Complemental strand, 22098297 - 22098106
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| ||||||||| ||||||| || ||||||||||||| |||| |||||||||||||  || | |||||| || |||| |||   |||  | |||||    
T  22098297 ctcacatttttattgaggtccatagggaggaccttggaggttgaag-tgttgcatcatgttccgaagcatttggttattttcttcggatatgcggttgcc 22098199  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    |||||||||||| ||||||||||||   | |||||||| ||| ||||||||||| |||| | | ||||| || ||| |||||||| |||||||    
T  22098198 ccttaggacatcatttcttagcccggataattcaacaccttgcctttgttgctcagtgcttatcctttgtacctcgatttgcatccatgccca 22098106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 263 - 454
Target Start/End: Original strand, 16419740 - 16419931
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||| ||||||||| ||||||| || |||||||||||||| |  |||||||||||||  || | |||||| || || | |||   |||  | |||||     
T  16419740 ctcacatttttattgaggtccatagggaggaccttggaggtggaagtgttgcatcatgttccgaagcatttggttattctcttcggatatgcggttgcct 16419839  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    ||||||||||| || |||||||||   | |||||||| ||| |||||||| ||||||| | | ||||| || || ||||||||| |||||||    
T  16419840 cttaggacatcattccttagcccggataattcaacaccttgcctttgttgttcggtgcttatcctttgtacctcagtttgcatccatgccca 16419931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 280 - 419
Target Start/End: Complemental strand, 21826442 - 21826303
Alignment:
Q  280 gtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggacatcgtttct 379  Q
    ||||||| || ||||||||||||||||  || ||||||||||  || | |||||| ||||||| |||   ||| || ||||||||| |||||||||| ||    
T  21826442 gtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttgttttcttcggatatgtggttgcccctttggacatcgttcct 21826343  T
Q  380 tagcccgatcatttcaacactttgtctttgttgctcggtg 419  Q
    ||  || || | |||||||| ||| |||||||||||||||    
T  21826342 tattcccattaattcaacaccttgcctttgttgctcggtg 21826303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 291 - 496
Target Start/End: Original strand, 11348116 - 11348321
Alignment:
Q  291 ggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggacatcgtttcttag-cccgatc 389  Q
    |||||||||||||||| ||| ||||||||||  || | |||||| || |||| |||   |||  | ||||||||||||||||| || ||||| ||||||     
T  11348116 ggaccttggaggtgaaaatggtgcatcatgttccgaagcatttggttattttcttcggatatgcggttgccccttaggacatcattccttagtcccgata 11348215  T
Q  390 atttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcatcattatagtttccaccggcttcttgtt 489  Q
    |||| | ||| ||| ||| |||||||||||| | | |||| ||| |||||||||||| ||| ||| | ||||| || || |||||| |||| ||| || |    
T  11348216 atttga-caccttgccttagttgctcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgtttcctccggtttcatggt 11348314  T
Q  490 catggtg 496  Q
    |||||||    
T  11348315 catggtg 11348321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 263 - 454
Target Start/End: Complemental strand, 21381167 - 21380976
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| ||||||||| ||||||| || || |||||||||| |||| |||||||||||||  || | |||||| || |||| |||   |||  | |||||    
T  21381167 ctcacatttttattgaggtccatagggagggccttggaggttgaag-tgttgcatcatgttccgaagcatttggttattttcttcggatatgcggttgcc 21381069  T
Q  362 ccttaggacatcgtttcttagccc-gatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
     | ||||||||| ||||||||||| ||| ||| | |||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  21381068 tcgtaggacatcatttcttagcccagataatt-cgacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 21380976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 21830277 - 21830232
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc 163  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||    
T  21830277 ggagtttggaaacactatgactaaagacactttattaggctccccc 21830232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 454
Target Start/End: Complemental strand, 8313542 - 8313351
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||| ||||||||| ||||||| || || || || ||||| | ||||||||||||||  || | ||| || || |||| |||   |||  | ||||||    
T  8313542 ctcacatttttattgaggtccatagggagggccctgaaggtgtaaatgttgcatcatgttccgaagcatgtggttattttcttcggatatgcggttgccc 8313443  T
Q  363 cttaggacatcgtttcttagccc-gatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    |  |||||||| ||||||||||| ||| ||| |||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  8313442 cgaaggacatcatttcttagcccagataatt-caacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 8313351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 194
Target Start/End: Complemental strand, 21826631 - 21826596
Alignment:
Q  159 cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||||||||||    
T  21826631 cccccacacttaggagaagcattgtcctcaatgatt 21826596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 365 - 454
Target Start/End: Original strand, 8324093 - 8324182
Alignment:
Q  365 taggacatcgtttcttagccc-gatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    ||||||||| ||||||||||| ||| ||| |||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  8324093 taggacatcatttcttagcccagataatt-caacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 8324182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 274 - 496
Target Start/End: Original strand, 21942605 - 21942827
Alignment:
Q  274 attgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggacatc 373  Q
    ||||| |||||||  | |||||||||||||| |  |||||||||||||  || | |||||| || || |||| |  |||  | |||||||||||||||||    
T  21942605 attgaggtccatagaggggaccttggaggtggaagtgttgcatcatgttccgaagcatttggttattctatttagatatgcggttgccccttaggacatc 21942704  T
Q  374 gtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcatcattatagttt 473  Q
     ||||  |||||    | |||||||| ||| ||||||| |||||||| | | |||| ||| |||||||||||| ||| ||| | ||||| || || ||||    
T  21942705 atttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatcattgttt 21942804  T
Q  474 ccaccggcttcttgttcatggtg 496  Q
    || |||| ||| || ||||||||    
T  21942805 cctccggtttcatggtcatggtg 21942827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 391 - 496
Target Start/End: Complemental strand, 22903456 - 22903351
Alignment:
Q  391 tttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcatcattatagtttccaccggcttcttgttc 490  Q
    ||||| ||| ||||||||||||||| |||| | ||||||| | |||| |||||||| ||| |||||| || |  | ||| | ||||||||||||||| ||    
T  22903456 tttcagcaccttgtctttgttgctcagtgcttattctttggatttcgttttgcatccatgtccaccgatccttgtcatattgtccaccggcttcttggtc 22903357  T
Q  491 atggtg 496  Q
    ||||||    
T  22903356 atggtg 22903351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 496
Target Start/End: Complemental strand, 22368937 - 22368798
Alignment:
Q  357 ttgccccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccacc 456  Q
    ||||||||||||||||| ||||  |||||    | |||||||| ||| ||||||| |||||||||| | |||| ||| |||||||||||| ||| ||| |    
T  22368937 ttgccccttaggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcatatcctttcaacctcggtttgcatccatgtccatc 22368838  T
Q  457 gttcatcattatagtttccaccggcttcttgttcatggtg 496  Q
     ||||| || || ||||||  ||| ||| || ||||||||    
T  22368837 tttcattatcattgtttcctacggtttcatggtcatggtg 22368798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 362; Significance: 0; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 263 - 781
Target Start/End: Original strand, 51673 - 52216
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttattt-gattgcc 361  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  51673 ctcacaattgtattgaagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatgtattttgattgcc 51772  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttca 461  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  51773 ccttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaactttggtttgcatccatgcccaccgttca 51872  T
Q  462 tcattatagtttccaccggcttcttgttcatggtgttgtacacctacctcctct------------------tcatcaccaccatcatcttgtacctgtg 543  Q
    ||||||||||||||||||| || |||||||||||||||| ||||||||||||||                  |||||| |||||||||||||||||||||    
T  51873 tcattatagtttccaccggatttttgttcatggtgttgtgcacctacctcctctttatcaccaccatcatcatcatcatcaccatcatcttgtacctgtg 51972  T
Q  544 ggttagtaccaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattc 643  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  51973 ggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataattctccattc 52072  T
Q  644 atattggtaattgtgagtagggtcatgggctttaaggaatgacaaagt------agtataaaagtttggataatagttctcatctatcctcttgatccct 737  Q
    ||||||||||||||||||||||||||||| | ||||||| ||||||||      |||||| |||||| |||||||||| || ||||||||||||||||||    
T  52073 atattggtaattgtgagtagggtcatgggttataaggaaggacaaagtagtaagagtatataagtttagataatagttttcctctatcctcttgatccct 52172  T
Q  738 tgattcacactcaccccaaacttcttagcaataaaagtgatgat 781  Q
    |||||||||||||||| |||| ||||||||||||||||||||||    
T  52173 tgattcacactcaccctaaacctcttagcaataaaagtgatgat 52216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 51467 - 51544
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||| |||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  51467 ggagtttggtaacactacgactcaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 51544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 335; Significance: 0; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 333 - 781
Target Start/End: Complemental strand, 29778 - 29312
Alignment:
Q  333 tgattgttttattcatttatttgattgccccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaa 432  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||| || |||||||||    
T  29778 tgattgttttattcatttatttgattgccccttaggacatagtttcttagtccgatcatttcaacaccttgtctttgttgctcggtgtattttctttgaa 29679  T
Q  433 cttcggtttgcatcaatgcccaccgttcatcattatagtttccaccggcttcttgttcatggtgttgtacacctacctcctcttcatcaccaccat---- 528  Q
    ||| | |||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||        
T  29678 ctttgttttgcatccatgcccaccgttcatcattatagtttccaccggctttttgtttatggtgttgtgcacctacctcctcttcatcaccaccatcatc 29579  T
Q  529 --------catcttgtacctgtgggttagtaccaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaa 620  Q
            ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29578 attaccatcatcttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcatacaa 29479  T
Q  621 ttagctctaatgattctccattcatattggtaattgtgagtagggtcatgggctttaaggaatgacaaagt------agtataaaagtttggataatagt 714  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||      ||||||||||||| |||||||||    
T  29478 ttagctctaatgattctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtgagagtataaaagtttagataatagt 29379  T
Q  715 tctcatctatcctcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat 781  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29378 tctcatctatcctcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 29312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 323; Significance: 0; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 263 - 781
Target Start/End: Original strand, 23711832 - 23712370
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||| ||||||    
T  23711832 ctcacaattttatggaaatccacaaggtggaccttggaggtgaaggtgttgcatcatg-atcggaacatttgattgtgttattcatttatttggttgccc 23711930  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||| ||||| ||||||||||| |||| |||||||||||||| || || ||||||||| |||||||||| |||||||||||| ||    
T  23711931 cttaggacatcgtttcttatcccgaccatttcaacaccttgtttttgttgctcggtgtatattatttgaactttggtttgcatccatgcccaccgtttat 23712030  T
Q  463 cattatagtttccaccggcttcttgttcatggtgttgtacacctacctcctcttcatcac---------------caccatcatcttgtacctgtgggtt 547  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||               |||||||||||||||||||||||||    
T  23712031 cattatagtttccaccggctttttgttcatggtgttgtgcacctacctcctcttcatcaccaccaccatcatcatcaccatcatcttgtacctgtgggtt 23712130  T
Q  548 agtaccaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatat 647  Q
    || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| || ||||||||||||    
T  23712131 aggaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaaaaattagttctaataatcctccattcatat 23712230  T
Q  648 tggtaattgtgagtagggtcatgggctttaaggaatgacaaagt------agtataaaagtttggataatagttctcatctatcctcttgatcccttgat 741  Q
    ||||||||||||||| ||||||||| | ||||||| ||||||||      |||||| |||||||||||||| || |||||||||||||||||||||||||    
T  23712231 tggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcctcttgatcccttgat 23712330  T
Q  742 tcacactcaccccaaacttcttagcaataaaagtgatgat 781  Q
    |||||||||||| |||| ||||||||| ||||||||||||    
T  23712331 tcacactcaccctaaacctcttagcaacaaaagtgatgat 23712370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 263 - 665
Target Start/End: Original strand, 20445975 - 20446386
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||| |||||    
T  20445975 ctcacaagtttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgctttattcatttacttgagtgccc 20446074  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20446075 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttattgctcggtgcatgttctttgaactttggtttgcatccatgcccaccgttcat 20446174  T
Q  463 cattatagtttccaccggcttcttgttcatggtgttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagtacc 553  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||          ||||||||||||||||| ||    
T  20446175 cattatagtttccaccggcttcttgttaatggtgttgtgcacctacctcctcttcatcaccaccatcatcaccatcattgtgtacctgtgggttagtgcc 20446274  T
Q  554 aacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaa 653  Q
    |||||| | ||| ||||| ||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || ||| |||||| ||||||||||||    
T  20446275 aacataaaccaagttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattgactctccactcatattggtaa 20446374  T
Q  654 ttgtgagtaggg 665  Q
    ||||||| ||||    
T  20446375 ttgtgagaaggg 20446386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 263 - 660
Target Start/End: Original strand, 23601767 - 23602173
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23601767 ctcacaattttattgaagtccataaggtggaccttggagatgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 23601866  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23601867 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 23601966  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    |||||||||||||||||||| |||||| ||||||    | | |||||||||||||||||||||||||||||||          |||||||||||||||||    
T  23601967 cattatagtttccaccggctacttgttaatggtgcaagtttgcacctacctcctcttcatcaccaccatcatcaccatcattgtgtacctgtgggttagt 23602066  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
     ||||||||    || ||||| ||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || ||| || ||| |||||||||    
T  23602067 gccaacata---aaagttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattgactcgccactcatattgg 23602163  T
Q  651 taattgtgag 660  Q
     |||||||||    
T  23602164 gaattgtgag 23602173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 263 - 657
Target Start/End: Original strand, 18487190 - 18487596
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18487190 ctcacaattttattgtagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcagaacatttgattgttttattcatttatttgattgccc 18487289  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  18487290 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacatcggtttgcatccatgcccaccgttcat 18487389  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    ||||||||||||||||| ||||||||| ||||||    | | |||||| ||||||||||||||||||||||||          |||||||||||||||||    
T  18487390 cattatagtttccaccgacttcttgttaatggtgcaagtttgcacctaactcctcttcatcaccaccatcatcaccatcattgtgtacctgtgggttagt 18487489  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
     |||||||| | ||| ||||| |||||||| |||||| |||| || ||||||||||||||||||||  |||||||  || ||| |||||| |||||||||    
T  18487490 gccaacataaaccaagttttctaccacctcaggattaataatatctgaattaggtagaataatcaagaaattagcattattgactctccactcatattgg 18487589  T
Q  651 taattgt 657  Q
    |||||||    
T  18487590 taattgt 18487596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 263 - 671
Target Start/End: Original strand, 21282038 - 21282458
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| | |||    
T  21282038 ctcacaattttattgaagtccataagatagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgatt-ttttattcatttatttgagttccc 21282136  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  21282137 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatccatgcacaccgttcat 21282236  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    |||||||||||||||| ||| |||||| ||||||   || | |||||||||||||||||||||||||||||||          |||||||||||||||||    
T  21282237 cattatagtttccaccagctacttgttaatggtgcaattttgcacctacctcctcttcatcaccaccatcatcaccatcattgtgtacctgtgggttagt 21282336  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaa-ttagctctaatgattctccattcatattg 649  Q
     |||||||| | ||| ||||| |||||||||||||||||||| | |||||| |||||||||||||| ||| |||||  || ||| |||||| ||||||||    
T  21282337 gccaacataaaccaagttttctaccacctccggattagtaatattcgaatttggtagaataatcaagcaatttagcgttattgactctccactcatattg 21282436  T
Q  650 gtaattgtgagtagggtcatgg 671  Q
    ||||||||||| ||||| ||||    
T  21282437 gtaattgtgagaagggttatgg 21282458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 263 - 671
Target Start/End: Complemental strand, 24939617 - 24939200
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24939617 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatttgagtgccc 24939518  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24939517 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgtttctcggtgcatgttctttgaacttcggtttgcatccatgcccaccgttcat 24939418  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    |||||||||||||||||||| |||||| ||||||    | | |||||||||||||||||||||||||||||||          |||||||||||||||||    
T  24939417 cattatagtttccaccggctacttgttaatggtgcaagtttgcacctacctcctcttcatcaccaccatcatcaccatcattgtgtacctgtgggttagt 24939318  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
     ||||||||    || ||||| ||||||| || ||||||||| || ||||||||||||||||||||  |||||||  || ||| || ||| |||||||||    
T  24939317 gccaacata---aaagttttctaccaccttcgaattagtaatatctgaattaggtagaataatcaagaaattagcattattgactcgccactcatattgg 24939221  T
Q  651 taattgtgagtagggtcatgg 671  Q
     ||||||||| |||| |||||    
T  24939220 gaattgtgagaagggccatgg 24939200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 263 - 654
Target Start/End: Complemental strand, 24218916 - 24218516
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24218916 ctcacaattttattgaagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcagaacatttgattgttttattcatttatttgattgccc 24218817  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||||||||| |||||||||| |||||||||||||||    
T  24218816 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgcttggtacatattctttgaactttggtttgcatccatgcccaccgttcat 24218717  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcacc---------accatcatcttgtacctgtgggttagt 550  Q
    |||||||||||||| |||||| ||||| ||||||    | | ||| ||||||||||||||||||         ||||||||  ||||| |||||||||||    
T  24218716 cattatagtttccatcggctttttgttaatggtgcaagtttgcacgtacctcctcttcatcaccaccatcattaccatcattgtgtacatgtgggttagt 24218617  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
     ||||||||     | ||||| |||| ||||||||||||||| || ||||||||||||||||||||  |||||||  || ||| |||||| |||||||||    
T  24218616 gccaacata---atagttttctaccatctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattgactctccactcatattgg 24218520  T
Q  651 taat 654  Q
    ||||    
T  24218519 taat 24218516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 263 - 544
Target Start/End: Original strand, 22827886 - 22828170
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  22827886 ctcacaattttaatgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcagaacatttgattattttattcatttatttgattgccc 22827985  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22827986 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatccatgcccaccgttcat 22828085  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatcttgtacctgtgg 544  Q
    |||||||||||||| |||||||||||| ||||||    | | |||||||||| | |||||||||||||||||  ||||| |||||    
T  22828086 cattatagtttccatcggcttcttgttaatggtgcaagtttgcacctacctcattttcatcaccaccatcattgtgtacttgtgg 22828170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 20445805 - 20445885
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20445805 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 20445885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 21281886 - 21281966
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21281886 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 21281966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 23601618 - 23601698
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23601618 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 23601698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 23711651 - 23711731
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23711651 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 23711731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 15734774 - 15734697
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  15734774 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 15734697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 20596804 - 20596881
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20596804 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 20596881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 20609381 - 20609458
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20609381 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 20609458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 20791690 - 20791767
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20791690 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 20791767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 23747290 - 23747213
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  23747290 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 23747213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 24954149 - 24954226
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24954149 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 24954226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 25007758 - 25007835
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25007758 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 25007835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 26846913 - 26846836
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  26846913 ggagtttggaaacactacgactaaagacactttattaggctcccccaacacttaggagaagcattgtcctcaatgatt 26846836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 30760596 - 30760673
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30760596 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 30760673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 22854819 - 22854739
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  22854819 ggagtttggaaacactacgactaaagacactttattaggctccccccacgcttaggagaagcattgtcctcaatgatttaa 22854739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 24219074 - 24218994
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24219074 ggagtttggaaacactacgactcaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 24218994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 24939769 - 24939689
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24939769 ggagtttggaaacactacaactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 24939689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 18072140 - 18072063
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||    
T  18072140 ggagtttggaaacactacgactaaagacactttattaggctccccccacacctaggagaagcattgtcctcaatgatt 18072063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 20621402 - 20621325
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||    
T  20621402 ggagtttggaaacactacgactaaagacactttattaggctccccccaaacttaggagaagcattgtcctcaatgatt 20621325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 22318465 - 22318542
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  22318465 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcatcaatgatt 22318542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 25117118 - 25117195
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25117118 ggagtttggaaacacaacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 25117195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 25176209 - 25176286
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25176209 ggagtttggaaacacaacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 25176286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 20603090 - 20603168
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgt-cctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  20603090 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtgcctcaatgatt 20603168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 18487038 - 18487118
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||||||||||| |||||||||    
T  18487038 ggagtttggaaacactacgactcaagacactttattagactccccccacacttaggagaagcattgtcctccatgatttaa 18487118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 263 - 454
Target Start/End: Complemental strand, 15734608 - 15734417
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| ||||||||| ||||||| || || |||||||||| |||| |||||||||||||  || | |||||| || |||| |||   |||  | |||||    
T  15734608 ctcacatttttattgaggtccatagggagggccttggaggttgaag-tgttgcatcatgttccgaagcatttggttattttcttcggatatgcggttgcc 15734510  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    || ||||||||| ||||||||||||   | |||||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  15734509 ccgtaggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 15734417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 263 - 446
Target Start/End: Original strand, 25007923 - 25008106
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| ||||||||| ||||||| || || |||||||||| |||| |||||||||||||  || |||||||| || |||| |||   |||  | |||||    
T  25007923 ctcacatttttattgaggtccatagggagggccttggaggttgaag-tgttgcatcatgttccgaaacatttggttattttcttcggatatgcggttgcc 25008021  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatc 446  Q
    || ||||||||| ||||||||||||   | |||||||| ||| |||||||||||||||| | | ||||| || ||||||||||||    
T  25008022 ccgtaggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatc 25008106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 263 - 454
Target Start/End: Original strand, 22318624 - 22318815
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||| ||||||||| ||||||| || |||||||||||||| |  |||||||||||||  || | |||||| || || | |||   |||  | ||||||    
T  22318624 ctcacatttttattgaggtccatagggaggaccttggaggtggaagtgttgcatcatgtgccgaagcatttggttattctcttcggatatgcggttgccc 22318723  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    |||||||| || ||||||||||||   | |||||||| ||| |||||||||||||||| | | ||||| || || ||||||||| |||||||    
T  22318724 cttaggacgtcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 22318815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 263 - 454
Target Start/End: Complemental strand, 23747125 - 23746934
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| | ||||||| ||||||| || || |||||||||| |||| |||||||||||||  || | |||||| || |||| |||   |||  | |||||    
T  23747125 ctcacattgttattgaggtccatagggagggccttggaggttgaag-tgttgcatcatgttccgaagcatttggttattttcttcggatatgcggttgcc 23747027  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    || ||||||||| ||||||||||||   | |||||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  23747026 ccgtaggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 23746934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 263 - 454
Target Start/End: Complemental strand, 20621237 - 20621046
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||| ||||||||| ||||||| || || || || ||||| |  |||||||||||||  || | |||||| || |||| |||   |||  | ||||||    
T  20621237 ctcacatttttattgaggtccatagggagggccctgaaggtgtaagtgttgcatcatgttccgaagcatttggttattttcttcggatatgcggttgccc 20621138  T
Q  363 cttaggacatcgtttcttagccc-gatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    | ||||||||| ||||||||||| ||| ||| |||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  20621137 cgtaggacatcatttcttagcccagataatt-caacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 20621046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 429
Target Start/End: Original strand, 24954326 - 24954483
Alignment:
Q  272 ttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggaca 371  Q
    ||||||| ||||||| || ||||||||||||||||  || ||||||||||  || | |||||| || |||| ||||  |||  | ||||||||| |||||    
T  24954326 ttattgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttcagatatgcggttgcccctttggaca 24954425  T
Q  372 tcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttcttt 429  Q
    || | |||||  |  || | |||||||| ||| |||||||||||||||| | ||||||    
T  24954426 tcctgtcttatgcttatgagttcaacaccttgcctttgttgctcggtgcttattcttt 24954483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 420
Target Start/End: Complemental strand, 22947411 - 22947348
Alignment:
Q  357 ttgccccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgc 420  Q
    ||||||||||||||||| ||||||| ||||   |||||||||| ||| |||||||||| |||||    
T  22947411 ttgccccttaggacatcatttcttaccccggatatttcaacaccttgcctttgttgcttggtgc 22947348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 197
Target Start/End: Complemental strand, 20574644 - 20574610
Alignment:
Q  163 cacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||| |||||||||||||||||||||||||||    
T  20574644 cacactttggagaagcattgtcctcaatgatttaa 20574610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 155
Target Start/End: Complemental strand, 22947680 - 22947643
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattag 155  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  22947680 ggagtttggaaacactacgactcaagacactttattag 22947643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 287; Significance: 1e-160; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 263 - 781
Target Start/End: Original strand, 11044 - 11568
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||  | || ||||||||| |||| | |||||||| ||||||||    
T  11044 ctcacaattttattgaggtccataaggtggaccttggaggtgaaggtgttgcagcatgttccagagcatttgattattttctacatttattcgattgccc 11143  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    |||  ||||| |||  ||||| ||  ||||||||||| ||||||||||||||| || | | |||||||||| | |||||||||| |||||||||||||||    
T  11144 ctttagacattgttcattagctcggccatttcaacaccttgtctttgttgctcagtacttattctttgaacattggtttgcatccatgcccaccgttcat 11243  T
Q  463 cattatagtttccaccggcttcttgttcatggtgttgtacacctacctcctcttcatcaccaccatcatcttgtacctgtgggttagtaccaacatacag 562  Q
    |||||||| |||||||||||| ||||||||||| |||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  11244 cattatagcttccaccggctt-ttgttcatggtattgtgcacgtacctcctcttcatcaccaccatcaccttgtacctgtgggttagtaccaacataaag 11342  T
Q  563 caaa-ttttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtgagt 661  Q
    |||| ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  11343 caaatttttccaccacctccagattagttatgtccggattaggtagaataatcaaacaattagctctaataattctccactcatattggtaattgtgagt 11442  T
Q  662 agggtcatgggctttaaggaatgacaaagtag------tataaaagtttggataatagttctcatctatcctcttgatcccttgattcacactcacccca 755  Q
    | ||||||||| | ||||||| ||||||||||      |||| |||| | ||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  11443 atggtcatgggttctaaggaaggacaaagtagtgagattatataagtctagataatagttcccctctatcctcttgatcccttgattcacactcacccca 11542  T
Q  756 aacttcttagcaataaaagtgatgat 781  Q
    |||||  |||||||||| ||||||||    
T  11543 aactttctagcaataaaggtgatgat 11568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 240; Significance: 1e-132; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 263 - 671
Target Start/End: Complemental strand, 17444 - 17034
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17444 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttgtattcatttatttgattgccc 17345  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17344 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatccatgcccaccgttcat 17245  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    |||||||||||||||||||| |||||| ||||||    | | |||||||||||||||||||||||||||||||          |||||||||||||||      
T  17244 cattatagtttccaccggctacttgttaatggtgcaagtttgcacctacctcctcttcatcaccaccatcatcaacatcattgtgtacctgtgggtta-- 17147  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
            | | ||| ||||| |||||||| | ||||||||| ||||||||||||||||||||||| ||||||||  || ||| |||||| |||||||||    
T  17146 --------aaaccaagttttctaccacctctgtattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattgg 17055  T
Q  651 taattgtgagtagggtcatgg 671  Q
    |||||||||| ||||||||||    
T  17054 taattgtgagaagggtcatgg 17034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 10399 - 10320
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10399 ggagtttggaaacactacgactcaagacactttattaggctcccccacacttaggagaagcattctcctcaatgatttaa 10320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 17598 - 17519
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17598 ggagtttggaaacactacgactcaagacactttattaggctcccccacacttaggagaagcattctcctcaatgatttaa 17519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 357 - 496
Target Start/End: Complemental strand, 132607 - 132468
Alignment:
Q  357 ttgccccttaggacatcgtttcttag-cccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccac 455  Q
    ||||||||||||||||| || ||||| |||||| ||| |||||| ||| ||| |||||||||||| | | |||| ||| |||||||||||| ||| |||     
T  132607 ttgccccttaggacatcattccttagtcccgataatt-caacaccttgccttagttgctcggtgcttatcctttcaacctcggtttgcatccatgtccat 132509  T
Q  456 cgttcatcattatagtttccaccggcttcttgttcatggtg 496  Q
    | ||||| || || ||||||  ||| ||| || ||||||||    
T  132508 ctttcattatcattgtttccttcggtttcatggtcatggtg 132468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566 (Bit Score: 237; Significance: 1e-131; HSPs: 2)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 264 - 670
Target Start/End: Complemental strand, 1693 - 1275
Alignment:
Q  264 tcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcccc 363  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1693 tcacaattttattgtagtccataaggtggactttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcccc 1594  T
Q  364 ttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcatc 463  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  1593 ttaggacatcatttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacatcggtttgcatccatgcccaccgttcatc 1494  T
Q  464 attatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagta 551  Q
    ||||||||||||||||| || ||||| ||||||    | | || |||||||||||| |||||||||||||||          |||||||||||||||||     
T  1493 attatagtttccaccgggttgttgttaatggtgcaagtttgcaactacctcctctttatcaccaccatcatcaccatcattgtgtacctgtgggttagtg 1394  T
Q  552 ccaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggt 651  Q
    |||||||| | ||| ||||| ||||||||| |||||||||| || ||||||||||||||||||||  |||||||   | ||| |||||| ||||||||||    
T  1393 ccaacataaaccaagttttctaccacctccagattagtaatatctgaattaggtagaataatcaagaaattagcataattgactctccactcatattggt 1294  T
Q  652 aattgtgagtagggtcatg 670  Q
    |||||| || |||||||||    
T  1293 aattgttagaagggtcatg 1275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 1857 - 1777
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  1857 ggagtttggaaacactacgactcaagacactttattaggctccccccacacttaggataagcattgtcctcaatgatttaa 1777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 218; Significance: 1e-119; HSPs: 5)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 263 - 660
Target Start/End: Original strand, 12571 - 12977
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12571 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtattggaacatttgattgttttattcatttatttgattgccc 12670  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
     |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||    
T  12671 attaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatattctttgaactttggtttgcatccatgcccaccgttcat 12770  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc---------ttgtacctgtgggttagt 550  Q
    ||||||||||||||||||||||||||| ||||||    | | |||||||||||||||||||||||||||||||          |||||||||||||||||    
T  12771 cattatagtttccaccggcttcttgttaatggtgcaagtttgcacctacctcctcttcatcaccaccatcatcaccatcattatgtacctgtgggttagt 12870  T
Q  551 accaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 650  Q
     ||||||||    || ||||| ||||||||| |||||||||| ||  | |||||||||||||| |   |||||||  || ||| |||| | |||||||||    
T  12871 gccaacata---aaagttttctaccacctccagattagtaatatctaatttaggtagaataataaggaaattagcattattgactctctactcatattgg 12967  T
Q  651 taattgtgag 660  Q
    ||| ||||||    
T  12968 taactgtgag 12977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 263 - 532
Target Start/End: Original strand, 8399 - 8671
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8399 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtattggaacatttgattgttttattcatttatttgattgccc 8498  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
     |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||    
T  8499 attaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatattctttgaactttggtttgcatccatgcccaccgttcat 8598  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc 532  Q
    ||||||||||||||||||||||||||| ||||||    | | |||||||||||||||||||||||||||||||    
T  8599 cattatagtttccaccggcttcttgttaatggtgcaagtttgcacctacctcctcttcatcaccaccatcatc 8671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 8241 - 8320
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcc-cccacacttaggagaagcattgtcctcaatgattta 196  Q
    |||| ||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8241 ggagattggaaacactacaactaaagacactttattaggctcctcccacacttaggagaagcattgtcctcaatgattta 8320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 12413 - 12492
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcc-cccacacttaggagaagcattgtcctcaatgattta 196  Q
    |||| ||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12413 ggagattggaaacactacaactaaagacactttattaggctcctcccacacttaggagaagcattgtcctcaatgattta 12492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 660
Target Start/End: Original strand, 8728 - 8868
Alignment:
Q  517 catcaccaccatcatcttgtacctgtgggttagtaccaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaa 616  Q
    ||||| |||||||||  ||||| ||||||||||| ||||||||    || ||||| ||||||||| |||||||||| ||  | |||||||||||||| |     
T  8728 catcatcaccatcattgtgtacatgtgggttagtgccaacata---aaagttttctaccacctccagattagtaatatctaatttaggtagaataataag 8824  T
Q  617 acaattagctctaatgattctccattcatattggtaattgtgag 660  Q
      |||||||  || ||| |||| | |||||||||||| ||||||    
T  8825 gaaattagcattattgactctctactcatattggtaactgtgag 8868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 215; Significance: 1e-117; HSPs: 3)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 263 - 532
Target Start/End: Original strand, 9452 - 9724
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9452 ctcacaattttattgaagtccataagttggaccttggaggtgaatatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 9551  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcat 462  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9552 cttaggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccaaccgttcat 9651  T
Q  463 cattatagtttccaccggcttcttgttcatggtg---ttgtacacctacctcctcttcatcaccaccatcatc 532  Q
    |||||||||||||||||||| |||||  ||||||    | | || ||||||||||||||||||||||||||||    
T  9652 cattatagtttccaccggctacttgtaaatggtgcaagtttgcaactacctcctcttcatcaccaccatcatc 9724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 552 - 671
Target Start/End: Original strand, 11741 - 11860
Alignment:
Q  552 ccaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggt 651  Q
    |||||||| | ||| ||||| ||||||||| |||||||||| ||||||||||||||||||||||| ||||||||  || ||| |||||| ||||||||||    
T  11741 ccaacataaaccaagttttctaccacctccagattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggt 11840  T
Q  652 aattgtgagtagggtcatgg 671  Q
    ||||||||| ||||||||||    
T  11841 aattgtgagaagggtcatgg 11860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 9322 - 9371
Alignment:
Q  148 tttattaggctcccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9322 tttattaggctcccccacacttaggagaagcattttcctcaatgatttaa 9371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 177; Significance: 5e-95; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 271 - 670
Target Start/End: Original strand, 25339250 - 25339652
Alignment:
Q  271 tttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggac 370  Q
    |||||||| |||||||||| |||||||| || ||||| |||||||||||||  | || |||||| |||||||  ||| | ||  ||||||||||| ||||    
T  25339250 tttattgaggtccataagggggaccttgcagatgaaggtgttgcatcatgttccagagcatttggttgttttcctcagtcatgcgattgcccctttggac 25339349  T
Q  371 atcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgttcatcattatag 470  Q
    ||| || |  ||||||  ||||||||||| |||| ||||||||||||||| | |||||||||||| |||||||||| || ||||| ||||||||||| ||    
T  25339350 atcattccgcagcccgtccatttcaacaccttgtatttgttgctcggtgcttattctttgaactttggtttgcatccattcccactgttcatcattaaag 25339449  T
Q  471 tttccaccggcttcttgttcatggtgt---tgtacacctacctcctcttcatcaccaccatcatcttgtacctgtgggttagtaccaacatacagcaaat 567  Q
    |  |||||||||||||||||||||||    ||| ||||||||||||||||||||||||||||||| ||||| |||| |||||| |||||||| || ||||    
T  25339450 tgcccaccggcttcttgttcatggtgcaagtgtgcacctacctcctcttcatcaccaccatcatcatgtacatgtgagttagtgccaacataaagaaaat 25339549  T
Q  568 tttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtgagtagggtc 667  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||| ||| |||   |||| |||||||||||||||||||| ||| |    
T  25339550 tttccaccacctccagattagttatgtccggattaggtagaataatcaaacaattagccctattgaccttccactcatattggtaattgtgagttgggcc 25339649  T
Q  668 atg 670  Q
    |||    
T  25339650 atg 25339652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 359 - 671
Target Start/End: Complemental strand, 24501304 - 24500997
Alignment:
Q  359 gccccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccaccgt 458  Q
    ||||||||||||||||||||||||||||  ||||||||||| ||||||||||| |||||||||| ||||||||||||| | ||||||| ||||||||  |    
T  24501304 gccccttaggacatcgtttcttagcccggccatttcaacaccttgtctttgtttctcggtgcatattctttgaacttc-gattgcatccatgcccacaat 24501206  T
Q  459 tcatcattatagtttccaccggcttcttgttcatggtgttgtacacctacctcctcttcatcaccaccatcatcttgtacctgtgggttagtaccaacat 558  Q
    |||||||||| | |||||||||||||||||||||||||||||  || |||||||||||||||||||     ||  ||||||||||||||||| |||||||    
T  24501205 tcatcattattgcttccaccggcttcttgttcatggtgttgtgtacgtacctcctcttcatcacca----tattgtgtacctgtgggttagtgccaacat 24501110  T
Q  559 acagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtg 658  Q
    | | ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||  || ||| |||||| | |||||||||||||||    
T  24501109 aaatcaagttttctaccacctccggattagtaatgtccgaattaggtagaataatcaagcaattagcattattgactctccactaatattggtaattgtg 24501010  T
Q  659 agtagggtcatgg 671  Q
    || |||| |||||    
T  24501009 agaagggccatgg 24500997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 116784 - 116707
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  116784 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 116707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 16774890 - 16774813
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  16774890 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 16774813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 17589647 - 17589570
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  17589647 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 17589570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 22045635 - 22045712
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22045635 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 22045712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 23160341 - 23160418
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23160341 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 23160418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 23571598 - 23571675
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23571598 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 23571675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 25356751 - 25356674
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  25356751 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 25356674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 27626833 - 27626756
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  27626833 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 27626756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 27630758 - 27630681
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  27630758 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 27630681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 27769770 - 27769847
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27769770 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 27769847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 24170574 - 24170498
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24170574 ggagtttggaaacactacgacacaagacactttattaggctcccccacacttaggagaagcattgtcctcaatgatt 24170498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 22664326 - 22664249
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||    
T  22664326 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcatcaatgatt 22664249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 23647177 - 23647100
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  23647177 ggagtttggaaacactacgactaaagacactttattaggatccccccacacttaggagaagcattgtcctcaatgatt 23647100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 25145739 - 25145816
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||    
T  25145739 ggagtttggaaacactacgactaaagacactttattagactccccccacacttaggagaagcattgtcctcaatgatt 25145816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 24517296 - 24517376
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24517296 ggagttttgaaacactacgactaaagatactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 24517376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 24820996 - 24821074
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct--cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||| |||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||    
T  24820996 ggagttgggaaacactacgactaaagacactttattaggctcccccccacacttaggagaagcattgtcctcaatgatt 24821074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 12589 - 12666
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||| ||||||||||||||    
T  12589 ggagtttggaaacactacgactaaagacactttattagactccccccacacttaggagaagcactgtcctcaatgatt 12666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 24796259 - 24796336
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||||||||||||||||  |||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24796259 ggagtttggaaacactacgactactgacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 24796336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 263 - 454
Target Start/End: Original strand, 12754 - 12945
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| ||||||||| ||||||| || || |||||||||| |||| |||||||||||||  || | |||||| || |||| ||    |||  | |||||    
T  12754 ctcacatttttattgaggtccatagggagggccttggaggttgaag-tgttgcatcatgttccgaagcatttggttattttctttggatatgcggttgcc 12852  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    |||||||||||| ||| ||||||||   | |||||||| |||||||||||||||||||| | ||||||| || |||||||||||| |||||||    
T  12853 ccttaggacatcatttattagcccggataattcaacaccttgtctttgttgctcggtgcttattctttgtacctcggtttgcatccatgccca 12945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 263 - 454
Target Start/End: Original strand, 22045800 - 22045991
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| ||||||||| ||||||| || || |||||||||| |||| |||||||||||||  || | |||||| || |||| |||   |||  | |||||    
T  22045800 ctcacatttttattgaggtccatagggagggccttggaggttgaag-tgttgcatcatgttccgaagcatttggttattttcttcggatatgcggttgcc 22045898  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    |||||||||||| ||||||||||||   | |||||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  22045899 ccttaggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 22045991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 263 - 454
Target Start/End: Complemental strand, 25356586 - 25356395
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggt-gaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    |||||| ||||||||| ||||||| || || |||||||||| |||| |||||||||||||  || | |||||| || |||| |||   |||  | |||||    
T  25356586 ctcacatttttattgaggtccatagggagggccttggaggttgaag-tgttgcatcatgttccgaagcatttggttattttcttcggatatgcggttgcc 25356488  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    |||||||||||| ||||||||||||   | |||||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  25356487 ccttaggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 25356395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 23630630 - 23630553
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||| |||  |||||| |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  23630630 ggagtttggaaacactatgacacaagacactttattaggctcccccaacactcaggagaagcattgtcctcaatgatt 23630553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 274 - 454
Target Start/End: Original strand, 25368772 - 25368952
Alignment:
Q  274 attgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaa-catttgattgttttattcatttatttgattgccccttaggacat 372  Q
    ||||| |||||||||| |||||||||||||  |||||||||||||||| || ||| ||||||||| || | |||   |||  | ||| ||||||||||||    
T  25368772 attgaggtccataaggaggaccttggaggttgagatgttgcatcatgt-tctgaagcatttgattattctcttcggatatgcggttggcccttaggacat 25368870  T
Q  373 cgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    | |||||| ||||||  |||||||||  ||| |||||||||||||||| | | || ||||| || ||||||||| |||||||    
T  25368871 catttctttgcccgaatatttcaacatcttgcctttgttgctcggtgcttatcctctgaacctcagtttgcatccatgccca 25368952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 26192592 - 26192669
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||| ||| |||||||    
T  26192592 ggagtttgaaaacactacgactaaaaacactttattaggctccccccacacttaggagaagcattgccctaaatgatt 26192669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 439 - 492
Target Start/End: Complemental strand, 20354253 - 20354200
Alignment:
Q  439 tttgcatcaatgcccaccgttcatcattatagtttccaccggcttcttgttcat 492  Q
    |||||||| ||| || ||||||||||||||||||||||||||||||||||||||    
T  20354253 tttgcatccatgtccgccgttcatcattatagtttccaccggcttcttgttcat 20354200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 454
Target Start/End: Complemental strand, 27626668 - 27626477
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||| ||||||||| ||||||| || || || || ||||| |  |||||||||||||  || | |||||| || |||| |||   |||  | ||||||    
T  27626668 ctcacatttttattgaggtccatagggagggccctgaaggtgtaagtgttgcatcatgttccgaagcatttggttattttcttcggatatgcggttgccc 27626569  T
Q  363 cttaggacatcgtttcttagccc-gatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    |  |||||||| ||||||||||| ||| ||| |||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  27626568 cgaaggacatcatttcttagcccagataatt-caacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 27626477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 274 - 416
Target Start/End: Complemental strand, 116567 - 116425
Alignment:
Q  274 attgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggacatc 373  Q
    ||||| ||||||| || ||||||||||||||||  || ||||||||||  || |||||||| || |||| |||   |||  | ||||||||| |||||||    
T  116567 attgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaaacatttggttattttcttcggatatgcggttgcccctttggacatc 116468  T
Q  374 gtttcttagcccgatcatttcaacactttgtctttgttgctcg 416  Q
     || ||||| || || | |||||||| ||| ||||||||||||    
T  116467 attccttagtcccattaattcaacaccttgcctttgttgctcg 116425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 496
Target Start/End: Original strand, 26192856 - 26192995
Alignment:
Q  357 ttgccccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcccacc 456  Q
    ||||||||||||||||| ||||  |||||    | |||||||| ||| ||||||| |||||||| | | |||| ||| |||||||||||| ||| ||| |    
T  26192856 ttgccccttaggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatc 26192955  T
Q  457 gttcatcattatagtttccaccggcttcttgttcatggtg 496  Q
     ||||| || || |||||| |||| ||| || ||||||||    
T  26192956 tttcattatcattgtttcctccggtttcatggtcatggtg 26192995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 429
Target Start/End: Complemental strand, 27630564 - 27630415
Alignment:
Q  280 gtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggacatcgtttct 379  Q
    ||||||| || ||||||||||||||||  || |||||||| |  || | |||||| ||||||| |||   |||  | ||||||||| |||||| ||| ||    
T  27630564 gtccatatggaggaccttggaggtgaaagtggtgcatcattttccgaagcatttggttgttttcttcggatatgcggttgcccctttggacattgttcct 27630465  T
Q  380 tagcccgatcatttcaacactttgtctttgttgctcggtgcatgttcttt 429  Q
    ||  || || | |||||||| ||| |||||||||||||||| | ||||||    
T  27630464 tatgcccattagttcaacaccttgcctttgttgctcggtgcttattcttt 27630415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 73; Significance: 6e-33; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 9824 - 9748
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9824 ggagtttggaaacactacgactaaagacactttattaggctcccccacacttaggagaagcattgtcctcaatgatt 9748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 68; Significance: 6e-30; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 534 - 657
Target Start/End: Complemental strand, 18632 - 18509
Alignment:
Q  534 tgtacctgtgggttagtaccaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 633  Q
    ||||||||||||||||| |||||||| | ||| ||||| |||||||||||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  18632 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 18533  T
Q  634 ttctccattcatattggtaattgt 657  Q
     |||||| ||||||||||||||||    
T  18532 ctctccactcatattggtaattgt 18509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 66; Significance: 9e-29; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 278 - 201
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  278 ggagtttggaaacactacgactaaagacactttattaggctcccccaacacttaggagaagcattgtcctcaatgatt 201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 66; Significance: 9e-29; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 83 - 6
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  83 ggagtttggaaacactacgactaaagacactttattaggctctccccacacttaggagaagcattgtcctcaatgatt 6  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 66; Significance: 9e-29; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 29751 - 29674
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  29751 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 29674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 66; Significance: 9e-29; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 90515 - 90438
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  90515 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 90438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 270 - 419
Target Start/End: Complemental strand, 90351 - 90202
Alignment:
Q  270 ttttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttagga 369  Q
    ||||||||| ||||||| || ||||||||||||||||  || |||||||||| ||| | |||||| || |||| |||   |||  | |||||||||||||    
T  90351 ttttattgaggtccatagggaggaccttggaggtgaaagtggtgcatcatgtttcgaagcatttggttattttcttcggatatgcggttgccccttagga 90252  T
Q  370 catcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtg 419  Q
    |||| || ||||| ||  ||| |||||||| ||| |||||||||||||||    
T  90251 catcattccttagtcccgtcaattcaacaccttgcctttgttgctcggtg 90202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 66; Significance: 9e-29; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 122610 - 122533
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  122610 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 122533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 66; Significance: 9e-29; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 18937 - 19014
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18937 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 19014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 355470 - 355547
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  355470 ggagtttggaaacactacgactcaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 355547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 252843 - 252920
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||| |||||||||||||||||||| ||||||||||| |||||| ||||||||||| |||||||||||||||||    
T  252843 ggagtttgaaaacactacgactaaagacactttattaggctccccccaaacttaggagaaacattgtcctcaatgatt 252920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 65; Significance: 4e-28; HSPs: 2)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 17519 - 17599
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17519 ggagttgggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 17599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 263 - 326
Target Start/End: Original strand, 17752 - 17815
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcgg 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17752 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcgg 17815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 38697 - 38775
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct--cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||    
T  38697 ggagtttggaaacactacgactaaagacactttattaggctcccccccacacttaggagaagcattgtcctcaatgatt 38775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 353 - 276
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||    
T  353 ggagtttggaaacactacgactaaagacactttatttggctccccccacacttaggagaagcattgtcctcaatgatt 276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 264 - 454
Target Start/End: Complemental strand, 197 - 7
Alignment:
Q  264 tcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaa-catttgattgttttattcatttatttgattgccc 362  Q
    ||||| ||||||||| ||||||| || |||||||||||||| |  ||||||||||||| || ||| |||||| || |||| |||   |||  | ||||||    
T  197 tcacatttttattgaggtccatagggaggaccttggaggtggaagtgttgcatcatgt-tctgaagcatttggttattttcttcggatatgcggttgccc 99  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    ||||||||||| ||||||||||||   | |||||||| ||| |||||||||||||||| | | ||||| || || ||||| ||| |||||||    
T  98 cttaggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcagtttgtatccatgccca 7  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 13277 - 13200
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  13277 ggagtttgtaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 13200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 263 - 454
Target Start/End: Complemental strand, 13112 - 12921
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||| ||||||||| ||||||  || |||||||||||||| |  ||||||||||||   || | |||||| || || | |||   |||  | ||||||    
T  13112 ctcacatttttattgaggtccatcgggaggaccttggaggtggaagtgttgcatcatggtccgaagcatttggttattctcttcggatatgcggttgccc 13013  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    ||||||||||| |||||||||  |   | |||||||| |||||||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  13012 cttaggacatcatttcttagcttggataattcaacaccttgtctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 12921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 9432 - 9355
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  9432 ggagtttggaaacactacgactcaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 9355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 4581 - 4658
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  4581 ggagtttggaaacactacgactaaagacactttataaggctccccccacacttaggagaagcattgtcctcaatgatt 4658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 446
Target Start/End: Original strand, 4730 - 4914
Alignment:
Q  263 ctcacaatttt-attgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgcc 361  Q
    ||||||||||| ||||| ||||||| || |||||||||||||  || |||||||||||||  || | ||||||||| || | |||  | || || |||||    
T  4730 ctcacaattttcattgaggtccatagggaggaccttggaggtttaggtgttgcatcatgtgccgaagcatttgattattctcttcggtgatgtggttgcc 4829  T
Q  362 ccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatc 446  Q
    |||||||||||| |||   || | |   | |||||||| ||| |||||||||||||||| | | |||| ||| ||||||||||||    
T  4830 ccttaggacatcattttggagtctggataattcaacaccttgcctttgttgctcggtgcttatcctttcaacctcggtttgcatc 4914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 23113 - 23190
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  23113 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaaacattgtcctcaatgatt 23190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 46178 - 46255
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||    
T  46178 ggagtttggaaacactacgactaaagacactttattaggctccccccaaacttaggagaagcattgtcctcaatgatt 46255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 274 - 454
Target Start/End: Original strand, 32729 - 32908
Alignment:
Q  274 attgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggacatc 373  Q
    ||||| ||||||| || |||||||||||||  ||||||||||||||||  || |  |||| ||| || | |||   |||  | ||||||| |||||||||    
T  32729 attgaggtccatagggaggaccttggaggttgagatgttgcatcatgttccgaagaatttaattattctcttcggatatgcggttgccccgtaggacatc 32828  T
Q  374 gtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
     ||||||||||||   | |||||||| ||| | |||||||||||||| | | ||||| || || ||||||||| |||||||    
T  32829 atttcttagcccggatagttcaacaccttg-ccttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 32908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 25352 - 25429
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||    
T  25352 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattgccctcaatgatt 25429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 24827 - 24750
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||    
T  24827 ggagtttggaaacactacgactaaagacactttattaggctccccccatacttaggagaagcattgtcctcaatgatt 24750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 62; Significance: 2e-26; HSPs: 4)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 115887 - 115810
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  115887 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaaacattgtcctcaatgatt 115810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 120191 - 120114
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  120191 ggagtttggaaacactacgactaaagacactttattaggctccccccacacttaggagaaacattgtcctcaatgatt 120114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 451
Target Start/End: Complemental strand, 115720 - 115533
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||| ||||||||| ||||||| || |||||||||||||| |  |||||||||||||  || | |||||| || || | |||   |||  | || |||    
T  115720 ctcacatttttattgaggtccatagggaggaccttggaggtggaagtgttgcatcatgttccgaagcatttggttattctcttcggatatgcggtttccc 115621  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgc 451  Q
    ||||||||||| ||||||||||||   | |||||||| ||| | |||||||||||||| | | |||||  | |||||||||||| ||||    
T  115620 cttaggacatcatttcttagcccggataattcaacaccttg-ccttgttgctcggtgcttatcctttgttcctcggtttgcatccatgc 115533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 451
Target Start/End: Complemental strand, 120024 - 119837
Alignment:
Q  263 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccc 362  Q
    |||||| ||||||||| ||||||| || |||||||||||||| |  |||||||||||||  || | |||||| || || | |||   |||  | || |||    
T  120024 ctcacatttttattgaggtccatagggaggaccttggaggtggaagtgttgcatcatgttccgaagcatttggttattctcttcggatatgcggtttccc 119925  T
Q  363 cttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgc 451  Q
    ||||||||||| ||||||||||||   | |||||||| ||| | |||||||||||||| | | |||||  | |||||||||||| ||||    
T  119924 cttaggacatcatttcttagcccggataattcaacaccttg-ccttgttgctcggtgcttatcctttgttcctcggtttgcatccatgc 119837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 61; Significance: 9e-26; HSPs: 2)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 274 - 454
Target Start/End: Complemental strand, 11592 - 11412
Alignment:
Q  274 attgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggacatc 373  Q
    ||||| ||||||| || |||||||||||||  ||||||| ||||||||  || | |||| |||| |||| |||   ||| ||||||||||||||||||||    
T  11592 attgaggtccatagggaggaccttggaggttgagatgttacatcatgttccgaagcattcgattattttcttcggatatgtgattgccccttaggacatc 11493  T
Q  374 gtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
     |||||||||||||  | |||||||| ||| |||||||| ||||||| | | ||||| || |||||||||||| |||||||    
T  11492 atttcttagcccgaataattcaacaccttgcctttgttgttcggtgcttatcctttgtacctcggtttgcatccatgccca 11412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 11765 - 11699
Alignment:
Q  129 acactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||  |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  11765 acactacgacacaagacactttattaggcttcccgcacacttaggagaagcattgtcctcaatgatt 11699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 118 - 193
Target Start/End: Complemental strand, 7252 - 7177
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctcccccacacttaggagaagcattgtcctcaatgat 193  Q
    |||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  7252 ggagtttggaaacactactactaaagacactttattaggttcccccacacttaggagaaacattgtcctcaatgat 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 299 - 382
Target Start/End: Complemental strand, 22298 - 22215
Alignment:
Q  299 gaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggacatcgtttcttag 382  Q
    ||||||||| ||||||||||||| |||||  |||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  22298 gaggtgaaggtgttgcatcatgtttcggagaatttgattgttttattcatttatttgatcgccccttaggacattgtttcttag 22215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 19162 - 19240
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct--cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||| |||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||    
T  19162 ggagttaggaaacactacgactaaagacactttattaggctcccccccacacttaggagaagcattgtcctcaatgatt 19240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 58; Significance: 6e-24; HSPs: 2)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 5845 - 5768
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||    
T  5845 ggagtttgaaaacactacgactaaagacactttattaggctccccctacacttaggagaagcattgtccttaatgatt 5768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 360 - 454
Target Start/End: Complemental strand, 5083 - 4989
Alignment:
Q  360 ccccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    |||||||||||||| ||||||||||||   | |||||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  5083 ccccttaggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 4989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 7988 - 7911
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||| ||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  7988 ggagtttagaaacactacgactaaagacactttattaggctccccccacccttaggagaagcattgtcctcaatgatt 7911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 12727 - 12650
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  12727 ggagtttggtaacactacgactaaagacactttattaggctccccccacacttaggagaagcattatcctcaatgatt 12650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 58; Significance: 6e-24; HSPs: 2)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 10661 - 10584
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||| ||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  10661 ggagtttgtaaacactacgactcaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 10584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 355 - 454
Target Start/End: Complemental strand, 10399 - 10300
Alignment:
Q  355 gattgccccttaggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    ||||||||||||||||||  ||||| | ||||   | |||||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  10399 gattgccccttaggacattatttctaaacccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 10300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 22120 - 22043
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||||| |||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||    
T  22120 ggagtttggaaaaactacgactaaagacactttattaggctccccccaaacttaggagaagcattgtcctcaatgatt 22043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 167 - 240
Alignment:
Q  122 tttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  167 tttggaaacactacgactaaagacactttattaggctccccccacacttaggagaagcattttcctcaatgatt 240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 58; Significance: 6e-24; HSPs: 4)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 44690 - 44613
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||||||||||||||| |||||| |||||||||||| ||||||||| |||||||||||||||||||||||||    
T  44690 ggagtttggaaacactacgactcaagacactttattaggctccccccacactgaggagaagcattgtcctcaatgatt 44613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 52079 - 52002
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggctc-ccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||||||||||||||||| |||||| |||||||||||| ||||||||| |||||||||||||||||||||||||    
T  52079 ggagtttggaaacactacgactcaagacactttattaggctccccccacactgaggagaagcattgtcctcaatgatt 52002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 441
Target Start/End: Complemental strand, 44414 - 44330
Alignment:
Q  357 ttgccccttaggacatcgtttcttagccc-gatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggttt 441  Q
    ||||||||||||||||| ||||  ||||| ||| ||| |||||||||| |||||||||||||||| | | |||| ||| |||||||    
T  44414 ttgccccttaggacatcatttcggagccctgataatt-caacactttgcctttgttgctcggtgcttatcctttcaacctcggttt 44330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 441
Target Start/End: Complemental strand, 51803 - 51719
Alignment:
Q  357 ttgccccttaggacatcgtttcttagccc-gatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggttt 441  Q
    ||||||||||||||||| ||||  ||||| ||| ||| |||||||||| |||||||||||||||| | | |||| ||| |||||||    
T  51803 ttgccccttaggacatcatttcggagccctgataatt-caacactttgcctttgttgctcggtgcttatcctttcaacctcggttt 51719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 36080 - 36156
Alignment:
Q  119 gagtttggaaacactacgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36080 gagtttggaaatactacgacaaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatt 36156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 7942 - 8019
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct-cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    |||||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  7942 ggagtttgaaaacaatacgactaaagacactttattaggctccccccacacttaggagaaacattgtcctcaatgatt 8019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2037 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold2037
Description:

Target: scaffold2037; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 1 - 64
Alignment:
Q  135 cgactaaagacaatttattaggctcccc-cacacttaggagaagcattgtcctcaatgatttaa 197  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1 cgactaaagacactttattaggctccccccacacttaggagaagcattgtcctcaatgatttaa 64  T

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Target: scaffold0402 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 270 - 420
Target Start/End: Complemental strand, 6953 - 6803
Alignment:
Q  270 ttttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttagga 369  Q
    ||||||||| ||||||| ||||||||||||||||  |||||||||||||||| ||| | ||||||||| || | |||   ||| || || ||||||||||    
T  6953 ttttattgaggtccatagggtggaccttggaggttgagatgttgcatcatgtttcgaagcatttgattattctcttcggatatgtggtttccccttagga 6854  T
Q  370 catcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgc 420  Q
    |||| |||||||||||||  | |||||||  |||  ||| |||||||||||    
T  6853 catcatttcttagcccgaataattcaacatcttgcttttattgctcggtgc 6803  T

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Target: scaffold0113 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 517 - 671
Target Start/End: Original strand, 38026 - 38177
Alignment:
Q  517 catcaccaccatcatcttgtacctgtgggttagtaccaacatacagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaa 616  Q
    ||||| |||||||||  ||||||||||||||||| |||||||| |   | ||||| |||||||  | ||||||||| || ||||||||||||||||||||    
T  38026 catcatcaccatcattgtgtacctgtgggttagtgccaacataaa---agttttctaccaccttagaattagtaatatctgaattaggtagaataatcaa 38122  T
Q  617 acaattagctctaatgattctccattcatattggtaattgtgagtagggtcatgg 671  Q
      |||||||  || ||| || ||| ||||||||| ||||||||| |||| |||||    
T  38123 gaaattagcattattgactcgccactcatattggaaattgtgagaagggccatgg 38177  T

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Target: scaffold0113; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 502 - 532
Target Start/End: Original strand, 38002 - 38032
Alignment:
Q  502 cacctacctcctcttcatcaccaccatcatc 532  Q
    |||||||||||||||||||||||||||||||    
T  38002 cacctacctcctcttcatcaccaccatcatc 38032  T

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Target: scaffold0367 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 11823 - 11758
Alignment:
Q  131 actacgactaaagacaatttattaggctcccccacacttaggagaagcattgtcctcaatgatttaa 197  Q
    ||||||||| |||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  11823 actacgactcaagacactttattaggc-cccccatacttaggagaagcattgtcctcaatgatttaa 11758  T

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Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 161075 - 161009
Alignment:
Q  129 acactacgactaaagacaatttattaggctccccc-acacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||  |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  161075 acactacgacacaagacactttattaggctccccccacacttaggggaagcattgtcctcaatgatt 161009  T

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Target: scaffold1571 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1571
Description:

Target: scaffold1571; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 357 - 454
Target Start/End: Complemental strand, 1602 - 1505
Alignment:
Q  357 ttgccccttaggacatcgtttcttagccc-gatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    ||||||| ||||||||| ||||||||||| ||| ||| |||||| ||| |||||||||||||||| | | ||||| || |||||||||||| |||||||    
T  1602 ttgccccgtaggacatcatttcttagcccagataatt-caacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgccca 1505  T

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Target: scaffold0328 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 1212 - 1285
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggc-tcccccacacttaggagaagcattgtcctcaatg 191  Q
    ||||||||||| ||| |||||| |||||| ||||||| || |||||||||||| |||||||||||||||||||||    
T  1212 ggagtttggaa-cacaacgactcaagacactttattacgcctcccccacacttgggagaagcattgtcctcaatg 1285  T

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Target: scaffold0231 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 366 - 454
Target Start/End: Complemental strand, 21889 - 21801
Alignment:
Q  366 aggacatcgtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 454  Q
    ||||||||||| ||||||||| | |||||||||| ||| |||||||| ||||||| | | || ||||| || ||||||||| |||||||    
T  21889 aggacatcgttccttagcccggttatttcaacaccttgcctttgttgttcggtgcttatcctctgaacctccgtttgcatccatgccca 21801  T

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Target: scaffold0034 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 59596 - 59636
Alignment:
Q  118 ggagtttggaaacactacgactaaagacaatttattaggct 158  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  59596 ggagtttggaaacactacgactaaagacactttattaggct 59636  T

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Target: scaffold1620 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold1620
Description:

Target: scaffold1620; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 194
Target Start/End: Original strand, 2 - 37
Alignment:
Q  159 cccccacacttaggagaagcattgtcctcaatgatt 194  Q
    ||||||||||||||||||||||||||||||||||||    
T  2 cccccacacttaggagaagcattgtcctcaatgatt 37  T

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Target: scaffold0506 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 274 - 420
Target Start/End: Original strand, 3207 - 3353
Alignment:
Q  274 attgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggacatc 373  Q
    ||||| ||||||| || |||||||| |||||||  || ||||||||||  || | |||||| || |||| |||   |||  | |||||||||||||||||    
T  3207 attgaggtccatagggaggaccttgaaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttcggatatgcggttgccccttaggacatc 3306  T
Q  374 gtttcttagcccgatcatttcaacactttgtctttgttgctcggtgc 420  Q
     || ||||| ||  ||| |||||||| ||| ||||||||||||||||    
T  3307 attccttagtcccgtcaattcaacaccttgcctttgttgctcggtgc 3353  T

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Target: scaffold1095 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 274 - 446
Target Start/End: Complemental strand, 2339 - 2167
Alignment:
Q  274 attgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgattgccccttaggacatc 373  Q
    ||||| |||||||  | |||||||||||||  || |||||||||||||  || | ||||||||| || | |||    || || |||||||||||||||||    
T  2339 attgaggtccatagcgaggaccttggaggttgaggtgttgcatcatgttccgaatcatttgattattctcttcggcgatgtggttgccccttaggacatc 2240  T
Q  374 gtttcttagcccgatcatttcaacactttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatc 446  Q
     ||||  ||||||   | |||||||  ||| |||||||||||||||| | | |||| ||| ||||||||||||    
T  2239 atttcggagcccggataattcaacatcttgcctttgttgctcggtgcttatcctttcaacctcggtttgcatc 2167  T

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Target: scaffold1184 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold1184
Description:

Target: scaffold1184; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 541 - 575
Target Start/End: Original strand, 537 - 571
Alignment:
Q  541 gtgggttagtaccaacatacagcaaattttccacc 575  Q
    ||||||||||||||||||| |||||||||||||||    
T  537 gtgggttagtaccaacataaagcaaattttccacc 571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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