View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13564_low_24 (Length: 321)
Name: NF13564_low_24
Description: NF13564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13564_low_24 |
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Alignment Details
Target: chr6 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 26 - 303
Target Start/End: Complemental strand, 30455532 - 30455255
Alignment:
| Q |
26 |
tcctcttggatgagtattaaagaataaagacgaggaaagacctccaccaaaggcaaattagacacccacacatccttccaaaagtaagttttcatacgat |
125 |
Q |
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| T |
30455532 |
tcctcttggatgagtattaaagaataaagacgaggaaagacctccaccaaaggaaaattagacacccacacatccttccaaaagtacgttttcataccat |
30455433 |
T |
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| Q |
126 |
tctccaccttcctgtccaactccctactaaaccaacgtacctcccctaccacctcgaaccccattaaatctttccaccaacgcgaagagtgagaccccca |
225 |
Q |
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|| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30455432 |
tccccaccttcctctccaactccctactaaaccaacgtacctcccctaccgcctcgaaccccattaaatctttccaccaacgcgaagagtgagaccccca |
30455333 |
T |
|
| Q |
226 |
cacctctccctcccttctacttctatagcttaccaacggcccataaatgtcctctagaacttccttccacaacaccgg |
303 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30455332 |
cacctctccctcccttctacttctatagcttaccaacggcccataaatgtcctctagaacttccttccacaacaccgg |
30455255 |
T |
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