View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13565_high_29 (Length: 312)
Name: NF13565_high_29
Description: NF13565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13565_high_29 |
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Alignment Details
Target: chr4 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 9 - 270
Target Start/End: Original strand, 31200479 - 31200740
Alignment:
| Q |
9 |
gaagaatatgtacatgattttggatttttcaccctgtatcatgcatacttactagtcaataagatagcattcagaaatcaacaaacagttttataaaatt |
108 |
Q |
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| T |
31200479 |
gaagaaaatgtacatgattttggatttttcaccctgtatcatgcatacttactagtcaataagatagcattcagaaatcaacaaacagttttataaaatt |
31200578 |
T |
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| Q |
109 |
aatatttaactaatgtatacttctatgtcattcattcattataaggatcaagtactatactacactattgagaaataacaactgaatcggacaattcaac |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31200579 |
aatatttaactaatgtatacttctatgtcattcattcattataaggatcaagtactatactacactattgagaaataacaactgaatcggacaattcaac |
31200678 |
T |
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| Q |
209 |
cgattgagccttacaccaaatctttaatacggttcagttactttgggggtttgatcgcagtt |
270 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31200679 |
cgattgagccttacaccaaatctttaatacggttcagttactttgggggtttgatcgcagtt |
31200740 |
T |
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