View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13565_high_35 (Length: 237)
Name: NF13565_high_35
Description: NF13565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13565_high_35 |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 44026509 - 44026714
Alignment:
| Q |
16 |
atgatattgatatgaacccattgaataacatcttctctcatccaaactaggactactaccatcctccaatccattatttctgaactttccaagtctcaca |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44026509 |
atgatattgatatgaacccattgaataacatcttctctcatccaaactaggactactaccatcctccaatccattatttctgaactttccaagtctcaca |
44026608 |
T |
|
| Q |
116 |
gaaaacacccttttcccaactttttcttcttctacgattatttctctttgactaaccaaagaatcatcaacattctccaaaggaaaactagagctagaga |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44026609 |
gaaaacacccttttcccaactttttcttcttctacgattatttctctttgactaaccaaagaatcatcaacattctccaaaggaaaactagagctagaga |
44026708 |
T |
|
| Q |
216 |
tatttg |
221 |
Q |
| |
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|||||| |
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| T |
44026709 |
tatttg |
44026714 |
T |
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