View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13565_high_37 (Length: 236)
Name: NF13565_high_37
Description: NF13565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13565_high_37 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 19 - 235
Target Start/End: Complemental strand, 7751075 - 7750859
Alignment:
| Q |
19 |
acctaaattgttcatttcatacagaaagtcagaaacaaacctcctaatctcagacatgacaaaaattgcttctagtttccttttcttcaccttcatctct |
118 |
Q |
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| T |
7751075 |
acctaaattgttcatttcatacagaaagtcagaaacaaacctcctaatctcagacatgacaaaaattgcttctagtttccttttcttcatcttcatctct |
7750976 |
T |
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| Q |
119 |
tccttaaaagcctctacacatattcaacccaatgcacttgttcttccagtcacaagagactatgccactagccaatatgttacactgattcaccaaagaa |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7750975 |
tccttaaaagcctctacacatattcaacccaatgcacttgttcttccagtcacaagagactatgccactagccaatatgttacactgattcaccaaagaa |
7750876 |
T |
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| Q |
219 |
cacctattgttcctatc |
235 |
Q |
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||||||||||||||||| |
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| T |
7750875 |
cacctattgttcctatc |
7750859 |
T |
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