View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13567_low_8 (Length: 247)
Name: NF13567_low_8
Description: NF13567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13567_low_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 7906030 - 7905802
Alignment:
| Q |
18 |
cacataacacacctcacaatactccacaaatttatttcgataatactcccatatttaccactgaacctgccacaccagatccttccatatcaacatctca |
117 |
Q |
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| T |
7906030 |
cacataacacacctcacaatactccacaaatttatttcgataatactcccatatttaccactgaacctgccacaccagatccttccatatcaacatctca |
7905931 |
T |
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| Q |
118 |
accacatgctcctcttgtttctgcccttactcaggctcgccattccactcgtactcgtacaacaccagctcatcttcaagactttgtttgctcagctctt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
7905930 |
accacatgctcctcttgtttctgcccttactcaggctcgccattccactcgtactcgtacaacaccagctcatcttcaagactttgtttgctcagctc-t |
7905832 |
T |
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| Q |
218 |
tcccatctccgcttccttgtcttatcaccc |
247 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
7905831 |
tcccatctccgcttccttgtcttatcaccc |
7905802 |
T |
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