View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13569_high_12 (Length: 377)

Name: NF13569_high_12
Description: NF13569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13569_high_12
NF13569_high_12
[»] chr2 (43 HSPs)
chr2 (219-370)||(7347602-7347753)
chr2 (19-108)||(27559724-27559813)
chr2 (19-108)||(34827061-34827150)
chr2 (19-108)||(44330533-44330622)
chr2 (19-103)||(42038672-42038756)
chr2 (19-102)||(39418049-39418132)
chr2 (19-108)||(44283302-44283391)
chr2 (19-102)||(7442920-7443003)
chr2 (22-108)||(4045256-4045342)
chr2 (19-100)||(9877114-9877195)
chr2 (19-108)||(18718388-18718477)
chr2 (19-108)||(32775926-32776015)
chr2 (16-100)||(4083353-4083437)
chr2 (19-102)||(20517567-20517650)
chr2 (19-102)||(41463546-41463629)
chr2 (19-108)||(23671525-23671614)
chr2 (19-108)||(30708877-30708966)
chr2 (19-108)||(36198974-36199063)
chr2 (19-108)||(40425272-40425361)
chr2 (19-102)||(3987261-3987344)
chr2 (19-100)||(332423-332504)
chr2 (19-100)||(14372226-14372307)
chr2 (19-108)||(14707558-14707646)
chr2 (19-100)||(43925105-43925186)
chr2 (16-100)||(38963665-38963749)
chr2 (19-102)||(24282989-24283072)
chr2 (19-102)||(41172786-41172869)
chr2 (21-102)||(13399134-13399215)
chr2 (19-100)||(16941842-16941923)
chr2 (19-100)||(17012507-17012588)
chr2 (19-108)||(40598278-40598367)
chr2 (19-95)||(1110441-1110517)
chr2 (19-100)||(38137563-38137643)
chr2 (19-100)||(42020234-42020316)
chr2 (19-108)||(4045999-4046087)
chr2 (37-92)||(30776239-30776294)
chr2 (22-100)||(7106430-7106508)
chr2 (127-157)||(7347574-7347604)
chr2 (19-73)||(15177427-15177481)
chr2 (19-100)||(5030315-5030396)
chr2 (19-59)||(11383996-11384036)
chr2 (17-73)||(22718492-22718548)
chr2 (16-88)||(43409431-43409503)
[»] chr7 (39 HSPs)
chr7 (19-108)||(4612110-4612199)
chr7 (19-108)||(19072918-19073007)
chr7 (19-120)||(44479733-44479833)
chr7 (19-108)||(36905675-36905764)
chr7 (19-108)||(47713525-47713614)
chr7 (19-108)||(31466381-31466470)
chr7 (19-108)||(48531471-48531560)
chr7 (19-104)||(31110774-31110859)
chr7 (19-108)||(47538072-47538161)
chr7 (19-102)||(21392167-21392250)
chr7 (19-102)||(28185440-28185523)
chr7 (19-108)||(10464138-10464227)
chr7 (19-108)||(23473992-23474081)
chr7 (19-108)||(35500770-35500859)
chr7 (19-108)||(36819845-36819934)
chr7 (19-108)||(47081129-47081218)
chr7 (19-107)||(37231587-37231675)
chr7 (19-102)||(2400434-2400517)
chr7 (19-100)||(18795171-18795252)
chr7 (19-108)||(37950968-37951057)
chr7 (19-108)||(42834315-42834404)
chr7 (19-102)||(36859237-36859320)
chr7 (19-102)||(42086667-42086750)
chr7 (19-100)||(32618973-32619054)
chr7 (30-108)||(34478031-34478109)
chr7 (19-102)||(36643311-36643394)
chr7 (19-100)||(46657782-46657863)
chr7 (19-100)||(33613362-33613442)
chr7 (19-100)||(44389317-44389398)
chr7 (37-100)||(31497740-31497803)
chr7 (19-89)||(3680390-3680460)
chr7 (19-95)||(9821235-9821311)
chr7 (19-95)||(10723160-10723236)
chr7 (22-85)||(42493563-42493626)
chr7 (19-73)||(5842175-5842229)
chr7 (19-84)||(30462173-30462238)
chr7 (19-96)||(35117162-35117238)
chr7 (19-84)||(40348556-40348621)
chr7 (19-59)||(29770546-29770586)
[»] chr3 (39 HSPs)
chr3 (19-108)||(54840151-54840240)
chr3 (19-108)||(21907145-21907234)
chr3 (19-104)||(45167448-45167533)
chr3 (19-108)||(38833812-38833901)
chr3 (19-108)||(18659201-18659290)
chr3 (19-106)||(10571169-10571256)
chr3 (19-102)||(32285205-32285288)
chr3 (19-108)||(7459843-7459932)
chr3 (19-108)||(51062539-51062628)
chr3 (19-102)||(29728127-29728210)
chr3 (19-102)||(43138000-43138083)
chr3 (19-102)||(52668515-52668598)
chr3 (19-108)||(1327461-1327550)
chr3 (19-108)||(8559028-8559117)
chr3 (19-108)||(17053013-17053102)
chr3 (19-100)||(25097218-25097299)
chr3 (19-104)||(48706873-48706958)
chr3 (26-100)||(47638211-47638285)
chr3 (19-108)||(37833049-37833138)
chr3 (19-102)||(32951165-32951248)
chr3 (22-108)||(38492203-38492289)
chr3 (19-100)||(35717886-35717967)
chr3 (19-100)||(49058005-49058086)
chr3 (29-102)||(53066529-53066602)
chr3 (16-100)||(36665164-36665248)
chr3 (19-102)||(46483699-46483780)
chr3 (36-108)||(34827419-34827491)
chr3 (19-100)||(3547451-3547533)
chr3 (19-100)||(48143912-48143993)
chr3 (19-100)||(54673927-54674008)
chr3 (30-102)||(4238523-4238595)
chr3 (19-102)||(15503172-15503255)
chr3 (19-88)||(20080940-20081008)
chr3 (16-74)||(3086287-3086345)
chr3 (19-69)||(10435283-10435333)
chr3 (19-69)||(27849100-27849150)
chr3 (19-73)||(28958946-28959000)
chr3 (19-100)||(7671344-7671425)
chr3 (19-84)||(50673724-50673789)
[»] chr8 (37 HSPs)
chr8 (19-108)||(3293124-3293213)
chr8 (19-108)||(37710048-37710137)
chr8 (19-108)||(38739806-38739895)
chr8 (19-108)||(38845756-38845845)
chr8 (19-108)||(6470994-6471083)
chr8 (19-104)||(30380679-30380764)
chr8 (19-108)||(40013800-40013889)
chr8 (19-108)||(23249001-23249090)
chr8 (19-108)||(29791091-29791180)
chr8 (19-108)||(30290073-30290162)
chr8 (19-108)||(43066275-43066364)
chr8 (19-108)||(45253895-45253984)
chr8 (19-108)||(6470637-6470726)
chr8 (19-108)||(8350903-8350992)
chr8 (19-108)||(13138155-13138244)
chr8 (19-98)||(1580798-1580877)
chr8 (19-102)||(2986474-2986557)
chr8 (19-109)||(886091-886181)
chr8 (19-108)||(2805499-2805588)
chr8 (19-108)||(14522529-14522617)
chr8 (19-108)||(18809425-18809514)
chr8 (19-108)||(45081961-45082050)
chr8 (19-108)||(31127828-31127917)
chr8 (19-100)||(44123819-44123900)
chr8 (19-100)||(10658126-10658207)
chr8 (19-108)||(39361274-39361363)
chr8 (16-95)||(14847355-14847434)
chr8 (19-100)||(12893677-12893758)
chr8 (19-100)||(20167608-20167689)
chr8 (19-108)||(23764472-23764561)
chr8 (19-88)||(25256482-25256551)
chr8 (25-100)||(3383563-3383638)
chr8 (19-76)||(7431268-7431325)
chr8 (19-84)||(7603354-7603419)
chr8 (16-73)||(20671314-20671371)
chr8 (19-100)||(42786047-42786128)
chr8 (19-59)||(11854674-11854714)
[»] chr6 (19 HSPs)
chr6 (19-108)||(22020425-22020514)
chr6 (16-108)||(8796195-8796287)
chr6 (19-108)||(25435560-25435649)
chr6 (19-108)||(31854967-31855056)
chr6 (19-103)||(7097901-7097985)
chr6 (19-108)||(643454-643543)
chr6 (19-104)||(11114714-11114799)
chr6 (19-108)||(18992052-18992141)
chr6 (19-108)||(16696039-16696128)
chr6 (19-108)||(20662082-20662171)
chr6 (16-102)||(30237313-30237399)
chr6 (19-102)||(24150890-24150973)
chr6 (16-102)||(25163310-25163396)
chr6 (19-100)||(33121691-33121772)
chr6 (19-100)||(13206984-13207065)
chr6 (19-100)||(19068802-19068883)
chr6 (19-79)||(29986210-29986270)
chr6 (26-84)||(12869377-12869435)
chr6 (19-84)||(19788625-19788690)
[»] chr5 (36 HSPs)
chr5 (19-108)||(32002037-32002126)
chr5 (19-108)||(32334661-32334750)
chr5 (19-108)||(29627417-29627506)
chr5 (19-108)||(39894930-39895019)
chr5 (19-100)||(4924869-4924950)
chr5 (19-108)||(5212945-5213034)
chr5 (25-108)||(5364579-5364662)
chr5 (19-108)||(14475253-14475342)
chr5 (19-108)||(39036559-39036648)
chr5 (19-108)||(40512703-40512792)
chr5 (19-108)||(42148456-42148545)
chr5 (19-102)||(23988726-23988809)
chr5 (19-102)||(37516294-37516377)
chr5 (19-102)||(43517089-43517172)
chr5 (19-108)||(16048234-16048323)
chr5 (19-108)||(22613732-22613821)
chr5 (19-108)||(35290435-35290524)
chr5 (19-100)||(37843606-37843687)
chr5 (19-108)||(39405913-39406002)
chr5 (19-100)||(1830804-1830885)
chr5 (19-108)||(4299856-4299945)
chr5 (19-108)||(35448020-35448109)
chr5 (19-108)||(970287-970376)
chr5 (19-100)||(40316271-40316352)
chr5 (19-100)||(41411188-41411269)
chr5 (19-102)||(38698112-38698195)
chr5 (19-100)||(2864103-2864184)
chr5 (19-100)||(19087647-19087728)
chr5 (19-108)||(25563649-25563738)
chr5 (19-93)||(19868724-19868798)
chr5 (29-108)||(43067380-43067459)
chr5 (19-102)||(30779775-30779858)
chr5 (26-100)||(35641800-35641874)
chr5 (19-59)||(24520354-24520394)
chr5 (27-86)||(21961384-21961443)
chr5 (22-94)||(16954775-16954842)
[»] chr4 (55 HSPs)
chr4 (19-108)||(5744106-5744195)
chr4 (19-108)||(46212373-46212462)
chr4 (19-102)||(4264283-4264366)
chr4 (19-108)||(5735420-5735509)
chr4 (19-108)||(7738842-7738931)
chr4 (30-108)||(6494750-6494828)
chr4 (19-104)||(1377181-1377265)
chr4 (19-108)||(3442367-3442456)
chr4 (19-108)||(3443410-3443499)
chr4 (19-108)||(4209508-4209597)
chr4 (19-108)||(5123180-5123269)
chr4 (19-108)||(20678611-20678700)
chr4 (19-108)||(39260155-39260244)
chr4 (19-108)||(47579435-47579524)
chr4 (19-108)||(49768594-49768683)
chr4 (19-102)||(3901168-3901251)
chr4 (19-102)||(26205733-26205816)
chr4 (19-108)||(18359996-18360085)
chr4 (19-108)||(19525737-19525826)
chr4 (19-108)||(25644508-25644597)
chr4 (19-108)||(28152140-28152229)
chr4 (19-108)||(28166423-28166512)
chr4 (19-108)||(36602843-36602932)
chr4 (19-108)||(46803781-46803870)
chr4 (30-102)||(55190595-55190667)
chr4 (19-102)||(19652285-19652368)
chr4 (21-108)||(23603670-23603757)
chr4 (19-102)||(39786386-39786469)
chr4 (19-108)||(6922963-6923052)
chr4 (19-100)||(19170570-19170651)
chr4 (19-108)||(19633872-19633961)
chr4 (19-108)||(45198363-45198452)
chr4 (19-100)||(50033169-50033250)
chr4 (19-102)||(23256084-23256167)
chr4 (19-102)||(37688062-37688145)
chr4 (19-100)||(50035685-50035766)
chr4 (19-100)||(51736985-51737066)
chr4 (19-102)||(21858948-21859031)
chr4 (19-102)||(21914811-21914894)
chr4 (30-97)||(19731200-19731267)
chr4 (19-102)||(40250726-40250809)
chr4 (19-100)||(19631457-19631539)
chr4 (19-100)||(39195521-39195602)
chr4 (30-100)||(35755214-35755284)
chr4 (19-100)||(55997260-55997341)
chr4 (19-74)||(26660559-26660614)
chr4 (18-97)||(47278311-47278390)
chr4 (19-61)||(50971608-50971650)
chr4 (22-108)||(53568503-53568588)
chr4 (19-100)||(39194061-39194142)
chr4 (72-108)||(42187023-42187059)
chr4 (19-73)||(28914426-28914480)
chr4 (19-73)||(46608271-46608325)
chr4 (19-108)||(37164039-37164128)
chr4 (68-100)||(9965437-9965469)
[»] chr1 (41 HSPs)
chr1 (21-108)||(38458881-38458968)
chr1 (19-104)||(32988376-32988461)
chr1 (19-108)||(49805275-49805364)
chr1 (19-108)||(50539409-50539498)
chr1 (19-108)||(1849849-1849939)
chr1 (19-108)||(25531927-25532016)
chr1 (19-108)||(52379138-52379227)
chr1 (19-102)||(37281241-37281324)
chr1 (19-108)||(30529073-30529162)
chr1 (19-108)||(42708649-42708738)
chr1 (19-108)||(50876513-50876602)
chr1 (19-102)||(29161992-29162075)
chr1 (19-100)||(3529325-3529406)
chr1 (19-108)||(16265182-16265271)
chr1 (19-108)||(16266311-16266400)
chr1 (19-108)||(48264834-48264923)
chr1 (21-108)||(16751476-16751563)
chr1 (19-108)||(3898594-3898683)
chr1 (19-100)||(23569705-23569786)
chr1 (19-108)||(26441783-26441872)
chr1 (19-108)||(39354287-39354376)
chr1 (19-108)||(48219665-48219754)
chr1 (19-101)||(24982500-24982582)
chr1 (19-108)||(43680219-43680308)
chr1 (19-100)||(47222364-47222445)
chr1 (16-100)||(4605145-4605229)
chr1 (19-108)||(14075883-14075971)
chr1 (23-100)||(21034560-21034637)
chr1 (19-108)||(41501630-41501719)
chr1 (19-100)||(50481425-50481506)
chr1 (29-108)||(45234872-45234951)
chr1 (19-100)||(31971418-31971499)
chr1 (19-94)||(23330601-23330677)
chr1 (16-100)||(48896950-48897034)
chr1 (19-89)||(27990757-27990827)
chr1 (19-73)||(45299376-45299430)
chr1 (19-100)||(32968144-32968225)
chr1 (19-100)||(50295892-50295973)
chr1 (29-102)||(52163610-52163683)
chr1 (19-51)||(32565895-32565927)
chr1 (30-94)||(38737869-38737933)
[»] scaffold0459 (1 HSPs)
scaffold0459 (19-108)||(12901-12990)
[»] scaffold0366 (2 HSPs)
scaffold0366 (19-108)||(10542-10631)
scaffold0366 (19-108)||(14208-14297)
[»] scaffold0051 (1 HSPs)
scaffold0051 (19-102)||(41246-41329)
[»] scaffold0092 (1 HSPs)
scaffold0092 (19-108)||(44131-44220)
[»] scaffold0007 (1 HSPs)
scaffold0007 (19-108)||(15239-15328)
[»] scaffold0027 (1 HSPs)
scaffold0027 (19-108)||(117470-117559)
[»] scaffold0604 (1 HSPs)
scaffold0604 (19-108)||(1263-1346)
[»] scaffold0340 (1 HSPs)
scaffold0340 (34-108)||(14502-14576)
[»] scaffold0111 (1 HSPs)
scaffold0111 (30-100)||(38263-38333)
[»] scaffold0687 (1 HSPs)
scaffold0687 (19-84)||(1036-1101)


Alignment Details
Target: chr2 (Bit Score: 148; Significance: 5e-78; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 219 - 370
Target Start/End: Original strand, 7347602 - 7347753
Alignment:
Q  219 ctagtttgaaaacctgaacccaactaatactatgaatatatcagatggttaaacctctcatacaatgagaaactaatatagattttcagattagaatgta 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7347602 ctagtttgaaaacctgaacccaactaatactatgaatatatcagatggttaaacctctcatacaatgacaaactaatatagattttcagattagaatgta 7347701  T
Q  319 gagactagatgaatttgaaataaacaacaatgaaagaaagaaaagggaacga 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7347702 gagactagatgaatttgaaataaacaacaatgaaagaaagaaaagggaacga 7347753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 27559724 - 27559813
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27559724 atcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaaaaatgtatattgtcaactgggtca 27559813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 34827061 - 34827150
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34827061 atcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatatatattgtcaactgggtca 34827150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 44330533 - 44330622
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  44330533 atcttacatgatattatttatctttgtgaattagtataaaagtgtggttaaagtatgtcaagtcaataatgtatattgtcaactgggtca 44330622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 42038672 - 42038756
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactg 103  Q
    |||||| |||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  42038672 atcttatatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactg 42038756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 39418132 - 39418049
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  39418132 atcttacatgatattatttatctttgtgaattagtagaaaaatgtagtcaaagtatgtcaagtcaataatgtatattgtcaact 39418049  T

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Target: chr2; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 44283391 - 44283302
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  44283391 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 44283302  T

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Target: chr2; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 7443003 - 7442920
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||| ||||||||| | |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  7443003 atcttacatgatattttttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaact 7442920  T

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Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 4045342 - 4045256
Alignment:
Q  22 ttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||||| ||||||||||||| ||||||||||||||| |||||||    
T  4045342 ttacatgatattatttatctttgtaaattagtataaaaatgtggtcaaaatatgtcaagtcaacaatgtatattgtcaaatgggtca 4045256  T

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Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 9877195 - 9877114
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||| |||||||||||||||||| |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||    
T  9877195 atcttatatgatattatttatctttgtgaattagtaaaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaa 9877114  T

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Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 18718388 - 18718477
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| || ||||||||| |||||||||||||| |||||||||||| |||||    
T  18718388 atcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaactaggtca 18718477  T

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Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 32776015 - 32775926
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||| ||||||||||||| ||||  |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  32776015 atctttcatgatattatttttcttagtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 32775926  T

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Target: chr2; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 4083353 - 4083437
Alignment:
Q  16 aatatcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||| |||||||||||||||||||||| ||| |||||| |||| | ||||||||||||||||||||||||||||||||||||||    
T  4083353 aatattttacatgatattatttatctttgtgatttagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaa 4083437  T

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Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 20517567 - 20517650
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| |||||||||||||| ||||||||||||    
T  20517567 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaact 20517650  T

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Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 41463629 - 41463546
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| | |||||||| |||| |||||| |||||||||||| ||||||||||||||||||||||    
T  41463629 atcttacatgatattatttatctttgtaaattagtagaaaaatgtggtgaaagtatgtcaaatcaataatgtatattgtcaact 41463546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 23671525 - 23671614
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||| |||||||||||||||||| |||||||||| |||||| ||||||||||||  ||||||||||||| |||||||||||| |||||    
T  23671525 atcttatatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtataccaagtcaataatgcatattgtcaactaggtca 23671614  T

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Target: chr2; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 30708877 - 30708966
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| | |||||||| |||| | |||||||| ||| ||||||||||||||||||||||||||| |||||    
T  30708877 atcttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaaatatatcaagtcaataatgtatattgtcaactaggtca 30708966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 36199063 - 36198974
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| ||||||  ||||||||||| |||| ||||||||| |||||||||||| |||||    
T  36199063 atcttacatgatattatttatctttgtgaattagtagaaaagtacggtcaaagtatatcaaatcaataatgcatattgtcaactaggtca 36198974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 40425361 - 40425272
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||||||||||||||||||||||  ||||||||| |||||| |||||||||||| |||| ||||||||| |||||||||||| |||||    
T  40425361 atcttacatgatattatttatctttgcgaattagtagaaaagtatggtcaaagtatatcaaatcaataatgcatattgtcaactaggtca 40425272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 3987344 - 3987261
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| |||||| ||||||| ||||||||||||    
T  3987344 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagttaataatgcatattgtcaact 3987261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 332423 - 332504
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |  ||||||||||| |||||||||||||||||||||||    
T  332423 atcttacatgatattatttatctttgtgaattagtaaaaaaatataatcaaagtatgttaagtcaataatgtatattgtcaa 332504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 14372226 - 14372307
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||||||| |||||||||| ||| |||||||||| |||||| |||||||||||| |||||||||||||| ||||||||||    
T  14372226 atcttacatgttattatttatatttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaa 14372307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 14707646 - 14707558
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| | |||||||||  |||||||||||||| |||||||||||| |||||    
T  14707646 atcttacatgatattatttatctttgtgaattagtagaaaagtat-gtcaaagtacatcaagtcaataatgcatattgtcaactaggtca 14707558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 43925186 - 43925105
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| | || ||||||||||| |||||||||||||||||| ||||    
T  43925186 atcttacatgatattatttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaataatgtatattatcaa 43925105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 38963665 - 38963749
Alignment:
Q  16 aatatcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||||||||| ||||||||||||||| |||||||||| |||| | || |||||||| |||||||||||||| |||||||||||    
T  38963665 aatatcttacataatattatttatctttgtgaattagtagaaaaatatgatcaaagtacgtcaagtcaataatatatattgtcaa 38963749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 24283072 - 24282989
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||| | | |||||| |||||||| |||||||| |||||||||||||    
T  24283072 atcttacatgatattatttatctttgtgaattagtaaaaaaatatagtcaaaatatgtcaaatcaataatatatattgtcaact 24282989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 41172869 - 41172786
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    |||||||||||||| |||||||||| ||||||| || |||||| || ||||||||| |||||||||||||| ||||||||||||    
T  41172869 atcttacatgatatcatttatctttgtgaattaatagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaact 41172786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 13399215 - 13399134
Alignment:
Q  21 cttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||| | |||||||| |||| | |||| |||| |||| |||||||||||||||||||||||||    
T  13399215 cttacatgatattatttatctttgtaaattagtagaaaaatatggttaaagaatgttaagtcaataatgtatattgtcaact 13399134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 16941923 - 16941842
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||| |||||||| |||||| |||||||||| |||||| || ||||||||| |||||||||||||| ||||||||||    
T  16941923 atcttacataatattattcatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaa 16941842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 17012588 - 17012507
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||| |||||||| |||||| |||||||||| |||||| || ||||||||| |||||||||||||| ||||||||||    
T  17012588 atcttacataatattattcatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaa 17012507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 40598278 - 40598367
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| ||||||| || |||| | |||||||||||| | || | |||||||||||||||||||| |||||    
T  40598278 atcttacatgatattatttatctttgtgaattattagaaaaatatggtcaaagtatattaaattaataatgtatattgtcaactaggtca 40598367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 1110441 - 1110517
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatatt 95  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||||| || |||||||||| ||||    
T  1110441 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgtttatt 1110517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 38137643 - 38137563
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||||| ||||| ||||| ||||| |||||    
T  38137643 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtc-ataatatatatcgtcaa 38137563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 42020316 - 42020234
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtc-aaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||| ||| |||||||||| || | | ||||| ||||||||| || ||||||||||||||||||||    
T  42020316 atcttacatgatattatttatatttgtgaattagtagaataatatggtctaaagtatgttaaatcaataatgtatattgtcaa 42020234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 4045999 - 4046087
Alignment:
Q  19 atcttacatgatat-tatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||||||||||| | ||||||||| |||||||||| |||||| ||  ||||||||||||| | | |||| ||||||||||||| |||||    
T  4045999 atcttacatgatatatttttatctttgtgaattagtagaaaagtatg--caaagtatgtcaaatgagtaatatatattgtcaactaggtca 4046087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 30776294 - 30776239
Alignment:
Q  37 tatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtat 92  Q
    ||||||| | |||||||| |||| | | ||||||||||||||||||||||||||||    
T  30776294 tatctttgtaaattagtagaaaaatattgtcaaagtatgtcaagtcaataatgtat 30776239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 7106430 - 7106508
Alignment:
Q  22 ttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||||||||||||||||||| |||||||||| |||| | || | | ||||||| || |||||| ||| | |||||||    
T  7106430 ttacatgatattatttatctttgtgaattagtagaaaaatatgattagagtatgttaactcaatattgttttttgtcaa 7106508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 157
Target Start/End: Original strand, 7347574 - 7347604
Alignment:
Q  127 atgaatcaaaataaaagtcagattaaaccta 157  Q
    |||||||||||||||||||||||||||||||    
T  7347574 atgaatcaaaataaaagtcagattaaaccta 7347604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 15177481 - 15177427
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagta 73  Q
    |||||| |||||||||||||||||| |  |||||||||||| | |||||||||||    
T  15177481 atcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagta 15177427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 5030396 - 5030315
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||| |||||||||||||||||| |  |||||||||||| |  | |||||||||||||  |||| || ||| ||||||||    
T  5030396 atcttatatgatattatttatctttgtatattagtataaaaatacgatcaaagtatgtcagatcaaaaaggtacattgtcaa 5030315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 11383996 - 11384036
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaa 59  Q
    |||||||||||||||||||||||||||  ||||||| ||||    
T  11383996 atcttacatgatattatttatctttatatattagtagaaaa 11384036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 22718492 - 22718548
Alignment:
Q  17 atatcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagta 73  Q
    |||||||| |||||||||||||||| |||  ||||||| |||| | |||||||||||    
T  22718492 atatcttatatgatattatttatctatatatattagtagaaaaatatggtcaaagta 22718548  T

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Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 43409431 - 43409503
Alignment:
Q  16 aatatcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataat 88  Q
    ||||||||  |||||||||||||||||| |  |||| || |||| | |||||||||||| ||| |||||||||    
T  43409431 aatatcttttatgatattatttatctttgtatattaatagaaaaatatggtcaaagtatatcaggtcaataat 43409503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 5e-41; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 4612199 - 4612110
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4612199 atcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 4612110  T

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Target: chr7; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 19072918 - 19073007
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  19072918 atcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatgtatattgtcaactgggtca 19073007  T

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Target: chr7; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 44479833 - 44479733
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcagagacggagg 118  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  44479833 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggt-agggacggagg 44479735  T
Q  119 ga 120  Q
    ||    
T  44479734 ga 44479733  T

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Target: chr7; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 36905675 - 36905764
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  36905675 atcttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatgtatattgtcaactgggtca 36905764  T

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Target: chr7; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 47713614 - 47713525
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  47713614 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 47713525  T

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Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 31466470 - 31466381
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| | |||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  31466470 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtca 31466381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 48531471 - 48531560
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||||||||||||||||||||||||||||||| |||||    
T  48531471 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtca 48531560  T

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Target: chr7; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 31110774 - 31110859
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgg 104  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||||||    
T  31110774 atcttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatttcaagtcaattatgtatattgtcaactgg 31110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 47538072 - 47538161
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| ||||||| |||||||||||| ||||||||||||||||||| |||||    
T  47538072 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaggtatgtcaagtccataatgtatattgtcaactaggtca 47538161  T

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Target: chr7; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 21392167 - 21392250
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||| | ||||||||||||||||||| ||||||||||||||||||||    
T  21392167 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagttaataatgtatattgtcaact 21392250  T

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Target: chr7; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 28185523 - 28185440
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| ||||||||||||    
T  28185523 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaact 28185440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 10464227 - 10464138
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||| ||||||||||||||||||||||||||||| |||| | |||||||||||| | ||||||||||||||||||||||||| |||||    
T  10464227 atcttatatgatattatttatctttatgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtca 10464138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 23474081 - 23473992
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| | ||||||||  ||||| |||||||||||||| ||||||||||||||||||||||||| |||||    
T  23474081 atcttacatgatattatttatctttgtaaattagtaggaaagtatggtcaaagtatgtaaagtcaataatgtatattgtcaactaggtca 23473992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 35500859 - 35500770
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||||||||||||||||||||||||||||||||| |||| | | |||||||||| | ||||||||||||||||||||||||| |||||    
T  35500859 atcttacatgatattatttatctttatgaattagtagaaaaatatagtcaaagtatcttaagtcaataatgtatattgtcaactaggtca 35500770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 36819845 - 36819934
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| |||||||||||||| |||||||||||| |||||    
T  36819845 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 36819934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 47081129 - 47081218
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| || ||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  47081129 atcttacatgatattatttatctttgtggattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 47081218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 37231675 - 37231587
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtc 107  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| | ||||||||||||||||||||||||| ||||    
T  37231675 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtc 37231587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 2400434 - 2400517
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| | |||||||||||| ||||||||||||    
T  2400434 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatataaagtcaataatgcatattgtcaact 2400517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 18795252 - 18795171
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||||| ||||||||||| |||||||||||    
T  18795252 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaataatatatattgtcaa 18795171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 37951057 - 37950968
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| || ||||| ||| |||||||||||||| |||||||||||| |||||    
T  37951057 atcttacatgatattatttatctttgtgaattagtaaaaaagtatgatcaaaatatatcaagtcaataatgcatattgtcaactaggtca 37950968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 42834404 - 42834315
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||| ||||||||| |||||||| ||| |||||    
T  42834404 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaaatcaataatgcatattgtcgactaggtca 42834315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 36859320 - 36859237
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| |||| ||||||||| ||||||||||||    
T  36859320 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaaatcaataatgcatattgtcaact 36859237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 42086750 - 42086667
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||| ||| |||||||||||||  ||||||||||||    
T  42086750 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatatcaagtcaataatacatattgtcaact 42086667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 32619054 - 32618973
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| |||||||||| |||||| || ||||||||| | |||||||||||| ||||||||||    
T  32619054 atcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatataaagtcaataatgcatattgtcaa 32618973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 108
Target Start/End: Complemental strand, 34478109 - 34478031
Alignment:
Q  30 tattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||||||||||| |||||||||| |||| | |||||||||||||| || |||||||||||||||||||||| |||||    
T  34478109 tattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgtatattgtcaactaggtca 34478031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 36643311 - 36643394
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    |||||| |||||||||||||||||| |||||||||  |||| | |||||||||||| | || ||||||||||||||||||||||    
T  36643311 atcttatatgatattatttatctttgtgaattagtggaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaact 36643394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 46657782 - 46657863
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| | ||||| || |||| | ||||||||| |||| ||||||||||||||| |||||||    
T  46657782 atcttacatgatattatttatctttgtaaattaatagaaaaatatggtcaaagaatgttaagtcaataatgtatgttgtcaa 46657863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 33613362 - 33613442
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||| ||| |||||||||| |||| | |||||||| ||| | ||||||||||||||||| |||||    
T  33613362 atcttacatgatattatttatttttgtgaattagtaaaaaaatatggtcaaa-tatattaagtcaataatgtatatggtcaa 33613442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 44389398 - 44389317
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||| ||| |||||||||| |||| | |  ||||| ||||| ||||||||| |||||||||||||    
T  44389398 atcttacatgatattatttatttttgtgaattagtagaaaaatattatcaaaatatgttaagtcaatagtgtatattgtcaa 44389317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 31497803 - 31497740
Alignment:
Q  37 tatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||| |||||||||| |||| | |||||||| ||| | |||||||||||||||||||||||    
T  31497803 tatctttgtgaattagtagaaaaatatggtcaaattatattaagtcaataatgtatattgtcaa 31497740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 3680460 - 3680390
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatg 89  Q
    |||||| |||||||||||||| ||| |  |||||||||||| |  ||||||| ||||||||||||||||||    
T  3680460 atcttatatgatattatttatatttgtatattagtataaaaataaggtcaaaatatgtcaagtcaataatg 3680390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 9821235 - 9821311
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatatt 95  Q
    |||||| ||||||||||||||||||||  ||||||| |||| | || ||||||| | |||||||| || ||||||||    
T  9821235 atcttatatgatattatttatctttatatattagtaaaaaaatatgatcaaagtttatcaagtcagtattgtatatt 9821311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 10723160 - 10723236
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatatt 95  Q
    |||||| ||||||||||||||||||||  ||||||| |||| | || ||||||| | |||||||| || ||||||||    
T  10723160 atcttatatgatattatttatctttatatattagtaaaaaaatatgatcaaagtttatcaagtcagtattgtatatt 10723236  T

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Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 42493626 - 42493563
Alignment:
Q  22 ttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaat 85  Q
    |||||||||||||||||||||| |  ||||||| |||| | |||||||||||||| | ||||||    
T  42493626 ttacatgatattatttatctttgtatattagtagaaaaatatggtcaaagtatgttaggtcaat 42493563  T

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Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 5842229 - 5842175
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagta 73  Q
    |||||| ||||||||||||||||||||  |||||||||||| | || ||||||||    
T  5842229 atcttatatgatattatttatctttatatattagtataaaaatatgatcaaagta 5842175  T

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Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 30462173 - 30462238
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaa 84  Q
    |||||| |||||||||||||||||| |  ||||||| |||| | ||||||||||| || |||||||    
T  30462173 atcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaagtaagttaagtcaa 30462238  T

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Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 35117238 - 35117162
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattg 96  Q
    |||||||||| || ||||||| |||||  |||||| ||||||| ||||||||||| ||||||| |||| || ||||||    
T  35117238 atcttacatgctaatatttatatttatacattagt-taaaagtatggtcaaagtaagtcaagtgaatagtgcatattg 35117162  T

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Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 40348556 - 40348621
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaa 84  Q
    |||||| |||||||||||||||||| |  ||||||| |||| | |||||||| ||||||| |||||    
T  40348556 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaatatgtcaggtcaa 40348621  T

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Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 29770586 - 29770546
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaa 59  Q
    ||||| ||||||||||||||||||| |||||||||| ||||    
T  29770586 atcttccatgatattatttatctttgtgaattagtagaaaa 29770546  T

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Target: chr3 (Bit Score: 86; Significance: 5e-41; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 54840240 - 54840151
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54840240 atcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 54840151  T

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Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 21907145 - 21907234
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  21907145 atcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtca 21907234  T

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Target: chr3; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 45167448 - 45167533
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgg 104  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  45167448 atcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaaatatgtcaagtcaataatgtatattgtcaactgg 45167533  T

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Target: chr3; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 38833812 - 38833901
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  38833812 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgtcaactgggtca 38833901  T

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Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 18659201 - 18659290
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  18659201 atcttacatgatattatttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 18659290  T

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Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 10571256 - 10571169
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggt 106  Q
    ||||||| ||||||||||||||||| | ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  10571256 atcttacttgatattatttatctttgtaaattagtataaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggt 10571169  T

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Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 32285288 - 32285205
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||||| || |||||||||||||||||||||||||||||||||||||    
T  32285288 atcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatgtatattgtcaact 32285205  T

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Target: chr3; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 7459932 - 7459843
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  7459932 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 7459843  T

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Target: chr3; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 51062539 - 51062628
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | ||||||||||||||||||||||||||||||||| ||||||| ||||    
T  51062539 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattatcaactgagtca 51062628  T

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Target: chr3; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 29728210 - 29728127
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||| ||| |||||||||||||||||||||||||||    
T  29728210 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatctcaagtcaataatgtatattgtcaact 29728127  T

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Target: chr3; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 43138000 - 43138083
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| ||||||||||||    
T  43138000 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaact 43138083  T

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Target: chr3; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 52668598 - 52668515
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| ||||||||||||    
T  52668598 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaact 52668515  T

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Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 1327461 - 1327550
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| | |||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  1327461 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 1327550  T

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Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 8559117 - 8559028
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| ||| || |||||||||||| |||||||||||||| |||||||||||| |||||    
T  8559117 atcttacatgatattatttatctttgtgaattagtagaaatgtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 8559028  T

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Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 17053013 - 17053102
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| | || ||||||||||||||||||||||||||||    
T  17053013 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaactgggtca 17053102  T

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Target: chr3; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 25097299 - 25097218
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||  ||||||||||||||    
T  25097299 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaaatatgtatattgtcaa 25097218  T

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Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 48706958 - 48706873
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgg 104  Q
    ||||||||||||||||||||||||| |||||||||| |||||| || ||||| ||||||||||||||||| |||||||||||||||    
T  48706958 atcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaaatatgtcaagtcaataatatatattgtcaactgg 48706873  T

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Target: chr3; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 47638211 - 47638285
Alignment:
Q  26 atgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||||||||||||||| |||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||    
T  47638211 atgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgtcaa 47638285  T

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Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 37833049 - 37833138
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| |||||||||||||| ||||||| |||| |||||    
T  37833049 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgttaactaggtca 37833138  T

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Target: chr3; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 32951248 - 32951165
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    |||||| |||||||||||||||||| |||||||||| |||| | |||||||||||| | |||||||||||||||||||||||||    
T  32951248 atcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaact 32951165  T

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Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 38492203 - 38492289
Alignment:
Q  22 ttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||||||||||||||||||| | |||||||| |||| | |||||||||||||| || |||||||||||||||||||||| |||||    
T  38492203 ttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaagtatgttaaatcaataatgtatattgtcaactaggtca 38492289  T

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Target: chr3; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 35717967 - 35717886
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||| ||||||||||||||| |||||||||| |||| | |||||||| ||||| |||||||||||||||||||||||    
T  35717967 atcttacataatattatttatctttgtgaattagtagaaaaatatggtcaaaatatgttaagtcaataatgtatattgtcaa 35717886  T

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Target: chr3; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 49058005 - 49058086
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| | || |||||||| |||||||||||||| |||||||||||    
T  49058005 atcttacatgatattatttatctttgtgaattagtagaaaaatatgatcaaagtacgtcaagtcaataatatatattgtcaa 49058086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 53066529 - 53066602
Alignment:
Q  29 atattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||| |||||||||| |||||| || ||||||||||||||||||||||| |||||||||||||    
T  53066529 atattatttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatatatattgtcaact 53066602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 36665164 - 36665248
Alignment:
Q  16 aatatcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||| |||||||||||||| |||||||||| |||| | | |||||||||||| |||| ||||||||||||||||||    
T  36665164 aatatcttacatggtattatttatctttgtgaattagtagaaaaatatagtcaaagtatgttaagttaataatgtatattgtcaa 36665248  T

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Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 46483699 - 46483780
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||| ||||||||||||||| |||||||||| |||||| |||||  |||||||||| ||||||||||||||||||||||    
T  46483699 atcttacataatattatttatctttgtgaattagtagaaaagtatggtc--agtatgtcaaatcaataatgtatattgtcaact 46483780  T

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Target: chr3; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 34827419 - 34827491
Alignment:
Q  36 ttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||||| | ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| |||||    
T  34827419 ttatctttgtaaattagtataaaagtatggtgaaagtatgtcaagtcaataatatatattgtcaactaggtca 34827491  T

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Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 3547533 - 3547451
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaag-tgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||| |||||||||||| || |||| ||||| ||||  | |||||||||||||| |||||||||||||||||||||||    
T  3547533 atcttacattatattatttatcattgtgaaatagtaaaaaaaatatggtcaaagtatgttaagtcaataatgtatattgtcaa 3547451  T

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Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 48143912 - 48143993
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| | |||||||| |||| | |||||||| ||| | | ||||||||| |||||||||||    
T  48143912 atcttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaaatatattatgtcaataatatatattgtcaa 48143993  T

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Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 54673927 - 54674008
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||| |||||||||||||||||| | |||||||| |||| | || |||||||| ||||| |||||||| |||||||||||    
T  54673927 atcttatatgatattatttatctttgttaattagtagaaaaatatgatcaaagtacgtcaaatcaataatatatattgtcaa 54674008  T

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Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 4238595 - 4238523
Alignment:
Q  30 tattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    |||||||||||||| |||||||||  |||| | |||||||||||| | |||| ||||||||||||||||||||    
T  4238595 tattatttatctttgtgaattagtggaaaaatatggtcaaagtatattaagttaataatgtatattgtcaact 4238523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 15503172 - 15503255
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||| ||||||||| ||||| | |||||||| |||| |  | ||||||||| | |||||||||||||||||| ||||||    
T  15503172 atcttacataatattatttttctttttaaattagtagaaaaataagatcaaagtatattaagtcaataatgtatattatcaact 15503255  T

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Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 20081008 - 20080940
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataat 88  Q
    |||||| ||||||||||||||||||||  |||||||||||| | | |||||||||||| | |||||||||    
T  20081008 atcttatatgatattatttatctttatatattagtataaaa-tatagtcaaagtatgttaggtcaataat 20080940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 3086287 - 3086345
Alignment:
Q  16 aatatcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtat 74  Q
    ||||||||| |||||||||||||||||| |  ||||||| |||| | ||||||||||||    
T  3086287 aatatcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaagtat 3086345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 10435283 - 10435333
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaa 69  Q
    ||||||||| ||||||||||||||| |||||||||| |||| | |||||||    
T  10435283 atcttacataatattatttatctttgtgaattagtagaaaaatatggtcaa 10435333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 27849100 - 27849150
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaa 69  Q
    ||||||||||||||||||||||||| | ||||| || |||||| |||||||    
T  27849100 atcttacatgatattatttatctttgttaattaatagaaaagtatggtcaa 27849150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 28958946 - 28959000
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagta 73  Q
    |||||| ||||||||||||||||||||  ||||||| |||| | |||||||||||    
T  28958946 atcttatatgatattatttatctttatatattagtagaaaaatatggtcaaagta 28959000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 7671425 - 7671344
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| ||| ||| || |||| | | ||||||  |||| ||||||||| ||| | |||||||    
T  7671425 atcttacatgatattatttatctttgtgagttaatagaaaaatattgtcaaaacatgttaagtcaatattgttttttgtcaa 7671344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 50673789 - 50673724
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaa 84  Q
    |||||| |||||||||||||||||| |  ||||||| |||| | ||||||||||| || |||||||    
T  50673789 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaagtcaa 50673724  T

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Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 3293213 - 3293124
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3293213 atcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 3293124  T

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Target: chr8; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 37710048 - 37710137
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37710048 atcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtca 37710137  T

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Target: chr8; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 38739806 - 38739895
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  38739806 atcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaaatcaataatatatattgtcaactgggtca 38739895  T

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Target: chr8; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 38845756 - 38845845
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  38845756 atcttacatgatattatttatctttgtgaattagtataaaaatgtggtcaaagtatgtcaagtcaacaatgtatattgtcaactgggtca 38845845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 6470994 - 6471083
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||| |||||    
T  6470994 atcttacatgatattatttatctttatgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatgtatattgtcaactaggtca 6471083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 30380679 - 30380764
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgg 104  Q
    ||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30380679 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgg 30380764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 40013800 - 40013889
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  40013800 atcttacatgatattatttatatttgtgaattaatataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtca 40013889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 23249001 - 23249090
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  23249001 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 23249090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 29791091 - 29791180
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  29791091 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 29791180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 30290073 - 30290162
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  30290073 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 30290162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 43066275 - 43066364
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||||||||| ||| |||||    
T  43066275 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgtcgactaggtca 43066364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 45253895 - 45253984
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||| ||||| |||||||||| |||| | |||||||||||||||||||||||||||||||||||||||| |||||    
T  45253895 atcttacatgatattatttttctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtca 45253984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 6470726 - 6470637
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||||||||||||||||||||||||||||||||| |||||| | |||||| ||| |||| |||||||||||||||||||||| |||||    
T  6470726 atcttacatgatattatttatctttatgaattagtagaaaagtatcgtcaaaatatctcaaatcaataatgtatattgtcaactaggtca 6470637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 8350992 - 8350903
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| | ||||| || |||| | |||||||||||||||||||||||||||||||||||||||| |||||    
T  8350992 atcttacatgatattatttatctttctaaattaatagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtca 8350903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 13138244 - 13138155
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||| |||||||||||||||||||||||| |||||| |||||    
T  13138244 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaaatatgtcaagtcaataatgtatattatcaactaggtca 13138155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 1580877 - 1580798
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtc 98  Q
    ||||||||||||||||||||||||| | |||||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  1580877 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaactcaataatgtatattgtc 1580798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 2986474 - 2986557
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    |||||||||||||||||| |||||| | |||||||| |||||| |||||||| |||||||||||||||||||||||||||||||    
T  2986474 atcttacatgatattattaatctttgtaaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgtcaact 2986557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 886181 - 886091
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcag 109  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||||| |||| |||||||||||||||||| | ||||||    
T  886181 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagttaataatgtatattgtcaaataggtcag 886091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 2805588 - 2805499
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||| ||||| |||||||||| |||||| |||||||||||| |||||||||| ||| |||||||||||| |||||    
T  2805588 atcttacatgatattatttttctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaatgatgcatattgtcaactaggtca 2805499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 14522529 - 14522617
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||| ||||||||| | |||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  14522529 atcttacatgatattttttatctttgt-aattagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgtcaactaggtca 14522617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 18809425 - 18809514
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||| |||||||||||||||||| |||||||||| |||| | |||||||||||| | ||||||||||||||||||||||||| |||||    
T  18809425 atcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtca 18809514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 45081961 - 45082050
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| ||||| |||||| |||| ||||||||| |||||||||||| |||||    
T  45081961 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcgaagtatatcaaatcaataatgcatattgtcaactaggtca 45082050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 31127917 - 31127828
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | || ||||||||| | ||||||||||| ||||||||||||| |||||    
T  31127917 atcttacatgatattatttatctttgtgaattagtagaaaaatatgatcaaagtatattaagtcaataatatatattgtcaactaggtca 31127828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 44123819 - 44123900
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||| ||||||||| ||||||| |||||||||||||||    
T  44123819 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaacaatgtatattgtcaa 44123900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 10658126 - 10658207
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||| ||||||||||| ||| | |||||||| |||| | |||||||||||||| |||||||||||||||||||||||    
T  10658126 atcttacataatattatttatatttgttaattagtagaaaaatatggtcaaagtatgttaagtcaataatgtatattgtcaa 10658207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 39361274 - 39361363
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||| |||||||||||||||||| ||||||| || |||||| || ||||||||| |||| ||||||||| |||||||||||| |||||    
T  39361274 atcttatatgatattatttatctttgtgaattaatagaaaagtatgatcaaagtatatcaaatcaataatgcatattgtcaactaggtca 39361363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 14847355 - 14847434
Alignment:
Q  16 aatatcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatatt 95  Q
    ||||||||| || ||||||||||||||| |||||||||| |||| | |||||||||||||| |||| |||||||||||||    
T  14847355 aatatcttaaataatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtaaagttaataatgtatatt 14847434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 12893677 - 12893758
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| | ||||  || |||| | |||||||||||||| |||||||||||| ||||||||||    
T  12893677 atcttacatgatattatttatctttgtaaattgatagaaaaatatggtcaaagtatgttaagtcaataatgcatattgtcaa 12893758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 20167689 - 20167608
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||| ||| |||||||||| |||| | |  ||||| ||||| ||||||||| |||||||||||||    
T  20167689 atcttacatgatattatttatttttgtgaattagtagaaaaatattatcaaaatatgttaagtcaatagtgtatattgtcaa 20167608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 23764561 - 23764472
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||| ||||| ||||||| || |||| | || ||||| ||| |||| | |||||||||||||||||||| |||||    
T  23764561 atcttacatgatattatttttctttgtgaattaatagaaaaatatgatcaaaatatatcaaattaataatgtatattgtcaactaggtca 23764472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 25256482 - 25256551
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataat 88  Q
    ||||||||||||||||||||||||| | |||||||| |||| | || ||||||||||| |||||||||||    
T  25256482 atcttacatgatattatttatctttgtaaattagtagaaaaatatgatcaaagtatgttaagtcaataat 25256551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 3383563 - 3383638
Alignment:
Q  25 catgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||| |||||||||  |||| | || ||| ||||| | ||||||||||| |||||||||||    
T  3383563 catgatattatttatctttgtgaattagtgaaaaaatatgatcacagtatattaagtcaataatatatattgtcaa 3383638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 7431268 - 7431325
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgt 76  Q
    |||||| |||||||||||||||||| |  ||||||| |||| |||||||||| |||||    
T  7431268 atcttatatgatattatttatctttgtatattagtagaaaaatgtggtcaaaatatgt 7431325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 7603419 - 7603354
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaa 84  Q
    |||||| |||||||||||||||||| |  |||||||||||| |  ||||||| ||||||| |||||    
T  7603419 atcttatatgatattatttatctttgtatattagtataaaaatacggtcaaaatatgtcaggtcaa 7603354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 20671371 - 20671314
Alignment:
Q  16 aatatcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagta 73  Q
    ||||||||| |||||||||||||||||| |  ||||||| |||| | |||||||||||    
T  20671371 aatatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 20671314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 42786047 - 42786128
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||| |||||||||||||||||| |  |||| || |||| | |||||||| | ||||||||||| | |||| ||||||||    
T  42786047 atcttatatgatattatttatctttgtatattaatagaaaaatatggtcaaaatgtgtcaagtcaaaactgtaaattgtcaa 42786128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 11854674 - 11854714
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaa 59  Q
    |||||||| |||||||||||||||| |||||||||| ||||    
T  11854674 atcttacaggatattatttatctttgtgaattagtagaaaa 11854714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 1e-38; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 22020425 - 22020514
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22020425 atcttacatgatattatttatctttgtgaattagtataaaagtgtggttaaagtatgtcaagtcaataatgtatattgtcaactgggtca 22020514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 8796195 - 8796287
Alignment:
Q  16 aatatcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  8796195 aatatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgttaagtcaataatgtatattgtcaactgggtca 8796287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 25435560 - 25435649
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  25435560 atcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatgtatattgtcaactgggtca 25435649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 31854967 - 31855056
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  31854967 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataacgtatattgtcaactgagtca 31855056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 7097985 - 7097901
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||    
T  7097985 atcttacatgatattatttatctttatgaattagtataaaagtatggtcaaagtatgttaagtcaataatctatattgtcaactg 7097901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 643543 - 643454
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  643543 atcttacatgatattatttatctttgtgacttagtataaaagtatggtcaaagtatgtcaagtcaattatgtatattgtcaactgagtca 643454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 11114714 - 11114799
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgg 104  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  11114714 atcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaaatatgtcaaatcaataatgtatattgtcaactgg 11114799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 18992052 - 18992141
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| | |||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  18992052 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtca 18992141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 16696128 - 16696039
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||| |||||    
T  16696128 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaatgatgtatattgtcaactaggtca 16696039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 20662171 - 20662082
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  20662171 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 20662082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 30237313 - 30237399
Alignment:
Q  16 aatatcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    |||||||||||| ||||| ||||||||| |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||    
T  30237313 aatatcttacattatattgtttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaact 30237399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 24150890 - 24150973
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| ||||||| || |||||| |||||||||||| |||||||||||||| ||||||||||||    
T  24150890 atcttacatgatattatttatctttgtgaattaatagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaact 24150973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 25163310 - 25163396
Alignment:
Q  16 aatatcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||| |||||||||||||||||| |||||||||| |||| | |||||||||||| | |||||||||||||||||||||||||    
T  25163310 aatatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaact 25163396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 33121691 - 33121772
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||||||||||||||||||||||||||||||||| |||| | |||||||||||  ||||||||||||| |||||||||||    
T  33121691 atcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaagtacatcaagtcaataatatatattgtcaa 33121772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 13207065 - 13206984
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| | ||||||||| |||| |||||||||| ||||||||||||    
T  13207065 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagaatgttaagtcaataaagtatattgtcaa 13206984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 19068883 - 19068802
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||||||||||||| || ||||| |||||||||| |||| | |||||||||||||| || ||||||||| || |||||||    
T  19068883 atcttacatgatattacttctctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgcattttgtcaa 19068802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 29986270 - 29986210
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaa 79  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| ||||    
T  29986270 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaa 29986210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 12869377 - 12869435
Alignment:
Q  26 atgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaa 84  Q
    |||||||||||||||||| |  ||||||| |||| | |||||||| |||||||||||||    
T  12869377 atgatattatttatctttgtatattagtagaaaaatatggtcaaactatgtcaagtcaa 12869435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 19788690 - 19788625
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaa 84  Q
    ||||||||||||||||||||| ||| |  ||||||| |||| | |||| ||||||||||| |||||    
T  19788690 atcttacatgatattatttatatttgtatattagtagaaaaatatggttaaagtatgtcaggtcaa 19788625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 1e-38; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 32002126 - 32002037
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32002126 atcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 32002037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 32334750 - 32334661
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32334750 atcttacatgatattatttatctttgtcaattagtataaaagtgtggtcaaagtatgtcaaatcaataatgtatattgtcaactgggtca 32334661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 29627417 - 29627506
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  29627417 atcttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatgtatattgtcaactgggtca 29627506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 39894930 - 39895019
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||| |||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39894930 atcttatatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 39895019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 4924950 - 4924869
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  4924950 atcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatatatattgtcaa 4924869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 5213034 - 5212945
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| | |||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  5213034 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtca 5212945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 5364579 - 5364662
Alignment:
Q  25 catgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||| |||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  5364579 catgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgtcaactgggtca 5364662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 14475342 - 14475253
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||| ||||| |||||||||| |||| | |||||||||||||||||||||||||||||||||||||||| |||||    
T  14475342 atcttacatgatattatttttctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtca 14475253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 39036559 - 39036648
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||| |||||    
T  39036559 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgacaagtcaataatgtatattgtcaactaggtca 39036648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 40512792 - 40512703
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| | ||||||||||||||| ||||||||||||||||||||||| ||||    
T  40512792 atcttacatgatattatttatctttgtgaattagtagaaaagtatagtcaaagtatgtcaaatcaataatgtatattgtcaactgagtca 40512703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 42148456 - 42148545
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  42148456 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 42148545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 23988726 - 23988809
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| ||||||||||||    
T  23988726 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaact 23988809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 37516294 - 37516377
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| |||||||||||||||||||||||||||    
T  37516294 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgtatattgtcaact 37516377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 43517172 - 43517089
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||||| || ||||||||||||||||||||||| |||||||||||||    
T  43517172 atcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatatatattgtcaact 43517089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 16048234 - 16048323
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| | ||||||||||||||||||||||||| |||||    
T  16048234 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtca 16048323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 22613821 - 22613732
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| | ||||||||||||||||||||||||| |||||    
T  22613821 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtca 22613732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 35290435 - 35290524
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||| ||||||||||||||| |||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||| |||||    
T  35290435 atcttacataatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgacaagtcaataatgtatattgtcaactaggtca 35290524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 37843687 - 37843606
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||| ||||| |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||    
T  37843687 atcttacatgatattatttttctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaa 37843606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 39405913 - 39406002
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| | ||||||||||||||||||||||||| |||||    
T  39405913 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtca 39406002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 1830804 - 1830885
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||||||||||||||||||||||||||||||||| |||| | ||||||||||| || ||||||||||| |||||||||||    
T  1830804 atcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaagtacgttaagtcaataatatatattgtcaa 1830885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 4299945 - 4299856
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||| |||||||||||||||||| |||||||||| |||| | |||||||||||| | ||||||||||||||||||||||||| |||||    
T  4299945 atcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtca 4299856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 35448109 - 35448020
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||| ||| |||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  35448109 atcttagatgttattatttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 35448020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 970287 - 970376
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||| |||||||||||||||||| |||||||||| |||| | |||||||||||| | |||| |||||||||||||||||||| |||||    
T  970287 atcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagttaataatgtatattgtcaactaggtca 970376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 40316271 - 40316352
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||||||||||||||||||||||||||||||||| |||| | |||||||| || || ||||||||||| |||||||||||    
T  40316271 atcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaattacgttaagtcaataatatatattgtcaa 40316352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 41411269 - 41411188
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| | ||||||||||| || ||||||||||| |||||||||||    
T  41411269 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtacgttaagtcaataatatatattgtcaa 41411188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 38698112 - 38698195
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    |||||||||||||||||| |||||| | |||||||| |||| | |||||||||||| |||||||||||||| ||||||||||||    
T  38698112 atcttacatgatattattcatctttgtaaattagtaaaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaact 38698195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 2864103 - 2864184
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||| |||||||||||||||||| |||||||||| |||| | |||| ||||||||| |||||||||||||||||| ||||    
T  2864103 atcttatatgatattatttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaataatgtatattatcaa 2864184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 19087728 - 19087647
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||| |||||||||||||||||||| |||||||||| |||| | |||||||||||| | || ||||||||||||||||||||    
T  19087728 atctaacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaa 19087647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 25563649 - 25563738
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||||||||||| |||||||||| |||||||||| |||| | || ||||||||||| || ||||||||||| |||||||||| |||||    
T  25563649 atcttacatgatataatttatctttgtgaattagtagaaaaatatgatcaaagtatgttaaatcaataatgtacattgtcaactaggtca 25563738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 19868798 - 19868724
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtata 93  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |  ||||||||||| ||||||||||||||||    
T  19868798 atcttacatgatattatttatctttgtgaattagtagaaaaatatcttcaaagtatgttaagtcaataatgtata 19868724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 43067380 - 43067459
Alignment:
Q  29 atattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||| | |||||||| |||| | |||||||||||| | || |||||||||||||||||||||| |||||    
T  43067380 atattatttatctttgtaaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaactaggtca 43067459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 30779858 - 30779775
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| | |||||||| |||| | |  ||||||| | | || ||||||||||||||||||||||    
T  30779858 atcttacatgatattatttatctttgtaaattagtagaaaaatataatcaaagtgtattaaatcaataatgtatattgtcaact 30779775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 35641874 - 35641800
Alignment:
Q  26 atgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||  ||||||| |||| | ||||||||||||||||  |||| |||| | ||||||||    
T  35641874 atgatattatttatctttatatattagtagaaaaatatggtcaaagtatgtcagatcaaaaatgcacattgtcaa 35641800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 24520354 - 24520394
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaa 59  Q
    ||||||||||||||| |||||||||||||||||||| ||||    
T  24520354 atcttacatgatattgtttatctttatgaattagtagaaaa 24520394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 21961384 - 21961443
Alignment:
Q  27 tgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaata 86  Q
    ||||||||||||| |||||  ||||||| | || | ||||||||||||||||||||||||    
T  21961384 tgatattatttatttttatatattagtagataaatatggtcaaagtatgtcaagtcaata 21961443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 16954775 - 16954842
Alignment:
Q  22 ttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatat 94  Q
    |||||||||||||||||||     ||||||||| |||| | ||||||||| |||||||||||| ||| |||||    
T  16954775 ttacatgatattatttatc-----gaattagtagaaaaatatggtcaaagcatgtcaagtcaaaaatatatat 16954842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 5744195 - 5744106
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5744195 atcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaaaaatgtatattgtcaactgggtca 5744106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 46212462 - 46212373
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  46212462 atcttacatgatattatttatctttatgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtca 46212373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 4264283 - 4264366
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4264283 atcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaact 4264366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 5735420 - 5735509
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  5735420 atcttacatgatattatttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 5735509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 7738931 - 7738842
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| | |||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  7738931 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtca 7738842  T

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Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 6494750 - 6494828
Alignment:
Q  30 tattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  6494750 tattatttatctttgtgaattagtataaaagtatggtcaaagtatgttaagtcaataatgtatattgtcaactgggtca 6494828  T

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Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 1377181 - 1377265
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgg 104  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  1377181 atcttacatgatattatttatatttgtgaattagtataaaagtatg-tcaaagtatgtcaagtcaataatgtatattgtcaactgg 1377265  T

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Target: chr4; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 3442456 - 3442367
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  3442456 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 3442367  T

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Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 3443499 - 3443410
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||||||||||||| |||||||| | |||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  3443499 atcttacatgatattacttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtca 3443410  T

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Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 4209508 - 4209597
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | ||||||||||||||||| |||||||||||||||||||||| |||||    
T  4209508 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaaatcaataatgtatattgtcaactaggtca 4209597  T

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Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 5123269 - 5123180
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||||||  |||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  5123269 atcttacatcttattatttatctttgtgaattagtaaaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtca 5123180  T

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Target: chr4; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 20678700 - 20678611
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  20678700 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 20678611  T

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Target: chr4; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 39260244 - 39260155
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| ||||||  | ||||||||||||||||||||||||||||||||||||| |||||    
T  39260244 atcttacatgatattatttatctttgtgaattagtagaaaagtaggatcaaagtatgtcaagtcaataatgtatattgtcaactaggtca 39260155  T

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Target: chr4; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 47579435 - 47579524
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  47579435 atcttacatgatattatttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 47579524  T

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Target: chr4; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 49768594 - 49768683
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  49768594 atcttacatgatattatttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 49768683  T

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Target: chr4; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 3901251 - 3901168
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| ||||||||||||    
T  3901251 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaact 3901168  T

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Target: chr4; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 26205816 - 26205733
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| ||||||||||||    
T  26205816 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaact 26205733  T

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Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 18360085 - 18359996
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |  ||||||||||||||||||||||||||||||||||||| |||||    
T  18360085 atcttacatgatattatttatctttgtgaattagtagaaaaatataatcaaagtatgtcaagtcaataatgtatattgtcaactaggtca 18359996  T

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Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 19525826 - 19525737
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||||| |||||||| |||||||||||||||| |||||    
T  19525826 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaatgatgtatattgtcaactaggtca 19525737  T

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Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 25644508 - 25644597
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| | ||||||||||||||||||||||||| |||||    
T  25644508 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtca 25644597  T

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Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 28152140 - 28152229
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| || ||||||||| |||||||||||||| |||||||||||| |||||    
T  28152140 atcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaactaggtca 28152229  T

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Target: chr4; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 28166423 - 28166512
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| |||||||||||||| |||||||||||| |||||    
T  28166423 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 28166512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 36602843 - 36602932
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |  ||||||||||||||||||||||||||||||||||||| |||||    
T  36602843 atcttacatgatattatttatctttgtgaattagtagaaaaatataatcaaagtatgtcaagtcaataatgtatattgtcaactaggtca 36602932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 46803781 - 46803870
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| |||||||||||||| |||||||||||| |||||    
T  46803781 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 46803870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 55190667 - 55190595
Alignment:
Q  30 tattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    |||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  55190667 tattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaact 55190595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 19652368 - 19652285
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||| ||||| |||||||||| |||| | | ||||||||||||||||||||||||||||||||||||||    
T  19652368 atcttacatgatattatttttctttttgaattagtagaaaaatatagtcaaagtatgtcaagtcaataatgtatattgtcaact 19652285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 108
Target Start/End: Complemental strand, 23603757 - 23603670
Alignment:
Q  21 cttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||| ||||| |||||||||| |||| | || ||||||||||||||||||||||||||||||||||||| |||||    
T  23603757 cttacatgatattatttttctttttgaattagtagaaaaatatgttcaaagtatgtcaagtcaataatgtatattgtcaactaggtca 23603670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 39786469 - 39786386
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    |||||||||||||||||| | |||| ||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  39786469 atcttacatgatattattaaactttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatatatattgtcaact 39786386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 6923052 - 6922963
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| | |||||||||||||||||| |||||| |||||    
T  6923052 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattatcaactaggtca 6922963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 19170651 - 19170570
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| | ||||||||||| |||||||||||||| |||||||||||    
T  19170651 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtacgtcaagtcaataatatatattgtcaa 19170570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 19633961 - 19633872
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||| ||||| |||||||||| |||| | ||||||||||| |||||||||||||| ||||||||||||| |||||    
T  19633961 atcttacatgatattatttttctttttgaattagtagaaaaatatggtcaaagtaggtcaagtcaataatatatattgtcaactaggtca 19633872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 45198452 - 45198363
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| ||||||||||||||  | || ||||||||| | ||||||||||||||||||||||||| |||||    
T  45198452 atcttacatgatattatttatctttgtgaattagtataaatttatgttcaaagtatattaagtcaataatgtatattgtcaactaggtca 45198363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 50033169 - 50033250
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||||| ||||||||||||||||| |||||    
T  50033169 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaataatgtatatcgtcaa 50033250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 23256084 - 23256167
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||| ||||||||||| ||| |||||||||| |||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  23256084 atcttacattatattatttatttttgtgaattagtagaaaagtatggtccaagtatgtcaaatcaataatgtatattgtcaact 23256167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 37688145 - 37688062
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||| ||||||||  ||||||||||||    
T  37688145 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaaatcaataatacatattgtcaact 37688062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 50035685 - 50035766
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||| ||||||||| ||||||| |||||||||||||||    
T  50035685 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaacaatgtatattgtcaa 50035766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 51737066 - 51736985
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||| ||| | |||||||||||||||||||||||    
T  51737066 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaaatatattaagtcaataatgtatattgtcaa 51736985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 21859031 - 21858948
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||  ||||| | |||||||||| |||||| |||||||||||| |||||||||||||  ||||||||||||    
T  21859031 atcttacatgatattaagtatctatgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataattcatattgtcaact 21858948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 21914894 - 21914811
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||  ||||| | |||||||||| |||||| |||||||||||| |||||||||||||  ||||||||||||    
T  21914894 atcttacatgatattaagtatctatgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataattcatattgtcaact 21914811  T

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Target: chr4; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 19731267 - 19731200
Alignment:
Q  30 tattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgt 97  Q
    |||||||||||||| |||||||| |||||  | |||||||||||||| ||||||||||||||||||||    
T  19731267 tattatttatctttctgaattagcataaatatatggtcaaagtatgttaagtcaataatgtatattgt 19731200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 40250726 - 40250809
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    |||||| || ||||||||||| ||| |  |||||||||||| |  ||||||| |||||||||||||||||||||||||||||||    
T  40250726 atcttatataatattatttatatttgtatattagtataaaaataaggtcaaactatgtcaagtcaataatgtatattgtcaact 40250809  T

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Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 19631457 - 19631539
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagta-taaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| |||||||| |  |||| | |||||||||||||| ||||| |||||||||||| ||||    
T  19631457 atcttacatgatattatttatctttgtgaattagcagaaaaaatatggtcaaagtatgttaagtctataatgtatattatcaa 19631539  T

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Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 39195602 - 39195521
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||| |||||||||||||||||| |  |||||||||||| | |||||||||||||||| ||||| | |||| ||||||||    
T  39195602 atcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagtatgtcaggtcaaaactgtaaattgtcaa 39195521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 35755284 - 35755214
Alignment:
Q  30 tattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||  |||||||||||| | || ||||| ||||||| |||||||||||| ||||||||    
T  35755284 tattatttatctttatatattagtataaaaatatgatcaaaatatgtcaggtcaataatgtaaattgtcaa 35755214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 55997260 - 55997341
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||| ||| |||||||||| |||| | ||||||||  || | ||||||||||| |||||| ||||    
T  55997260 atcttacatgatattatttatttttgtgaattagtagaaaaatatggtcaaaaaatattaagtcaataatatatattatcaa 55997341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 26660559 - 26660614
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtat 74  Q
    |||||||||||||||||||| |||||||||||| || |||| | ||||||||||||    
T  26660559 atcttacatgatattatttacctttatgaattaatagaaaaatatggtcaaagtat 26660614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 47278390 - 47278311
Alignment:
Q  18 tatcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgt 97  Q
    |||||||||| ||||||||||||||| ||||||  || |||| | || ||||||||| | |||||||||||| |||||||    
T  47278390 tatcttacataatattatttatctttgtgaattgctagaaaaatatgatcaaagtatattaagtcaataatgcatattgt 47278311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 50971608 - 50971650
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagt 61  Q
    ||||||||||||||||||||||||| |||||||||| ||||||    
T  50971608 atcttacatgatattatttatctttgtgaattagtagaaaagt 50971650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 53568503 - 53568588
Alignment:
Q  22 ttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||| ||||||||||||||| |||||||||| |||| | |||||||| ||||| || |  |||||||||| ||||||||| ||||    
T  53568503 ttacataatattatttatctttgtgaattagtagaaaaatatggtcaaaatatgttaa-tgtataatgtataatgtcaactgagtca 53568588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 39194061 - 39194142
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||| ||| | ||||||||| || ||||||| |||| |   |||||||||||| ||||||||| |||||||||||||    
T  39194061 atcttacattataatgtttatctttgtgtattagtagaaaaatacagtcaaagtatgttaagtcaatattgtatattgtcaa 39194142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 42187059 - 42187023
Alignment:
Q  72 tatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||||||||| |||||    
T  42187059 tatgtcaagtcaataatgtatattgtcaactaggtca 42187023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 28914480 - 28914426
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagta 73  Q
    |||||| ||||||||||||||||||||  ||||||| |||| | |||||||||||    
T  28914480 atcttatatgatattatttatctttatatattagtagaaaaatatggtcaaagta 28914426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 46608325 - 46608271
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagta 73  Q
    |||||| |||||||||||||||||| |  |||||||||||| | |||||||||||    
T  46608325 atcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagta 46608271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 37164128 - 37164039
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||| |||||||||||||||||| |  ||||||| |||| | | ||||||||| || | ||||| | |||||||| |||| |||||||    
T  37164128 atcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaagtaagttaggtcaaaattgtatattttcaaatgggtca 37164039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 9965469 - 9965437
Alignment:
Q  68 aaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||| |||||||||||||||||||||    
T  9965469 aaagtatgtcaggtcaataatgtatattgtcaa 9965437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 108
Target Start/End: Original strand, 38458881 - 38458968
Alignment:
Q  21 cttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38458881 cttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 38458968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 32988461 - 32988376
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgg 104  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32988461 atcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaaatatgtcaagtcaataatgtatattgtcaactgg 32988376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 49805364 - 49805275
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  49805364 atcttacatgatattatttatctttgtgaattagtattaaaatgtggtcaaagtatgtcaagtcaacaatgtatattgtcaactgggtca 49805275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 50539409 - 50539498
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  50539409 atcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaattatgtatattgtcaactgagtca 50539498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 1849849 - 1849939
Alignment:
Q  19 atcttacatgata-ttatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1849849 atcttacatgatacttatttatttttgtgaattagtagaaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 1849939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 25531927 - 25532016
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  25531927 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgtcaactaggtca 25532016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 52379138 - 52379227
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  52379138 atcttacatgatattatttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 52379227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 37281241 - 37281324
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||    
T  37281241 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatatatattgtcaact 37281324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 30529162 - 30529073
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||| ||| ||||||||||||||||||||||||||| |||||    
T  30529162 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaattatctcaagtcaataatgtatattgtcaactaggtca 30529073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 42708649 - 42708738
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  42708649 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 42708738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 50876513 - 50876602
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  50876513 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 50876602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 29161992 - 29162075
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| |||||||||| |||||| || ||||||||| |||||||||||||||||||||||||||    
T  29161992 atcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatctcaagtcaataatgtatattgtcaact 29162075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 3529325 - 3529406
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||||||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||||| |||||||||||    
T  3529325 atcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaagtatgttaagtcaataatatatattgtcaa 3529406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 16265182 - 16265271
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| | ||||||||||||||||||||||||| |||||    
T  16265182 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtca 16265271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 16266311 - 16266400
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| | ||||||||||||||||||||||||| |||||    
T  16266311 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtca 16266400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 48264923 - 48264834
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||| ||||||||| |||||||||||| |||||    
T  48264923 atcttacatgatattatttatctttctgaattagtagaaaagtatggtcaaagtatatcaactcaataatgcatattgtcaactaggtca 48264834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 108
Target Start/End: Complemental strand, 16751563 - 16751476
Alignment:
Q  21 cttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||| |||||||||| |||| | |||||||| ||||| ||||||||||||||||||||||||| |||||    
T  16751563 cttacatgatattatttatctttgtgaattagtaaaaaaatatggtcaaaatatgttaagtcaataatgtatattgtcaactaggtca 16751476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 3898683 - 3898594
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||| ||||||||||||||| |||||||||| |||| | |||||||||||| | ||||||||||||||||||||||||| |||||    
T  3898683 atcttacataatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtca 3898594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 23569786 - 23569705
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| | ||||||||||| |||||||||||||| |||||||||||    
T  23569786 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtacgtcaagtcaataatatatattgtcaa 23569705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 26441783 - 26441872
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||| |||||||||||||||||| |||||||||| |||| | |||||||||||| | ||||||||||||||||||||||||| |||||    
T  26441783 atcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtca 26441872  T

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Target: chr1; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 39354376 - 39354287
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||| ||| |||||||||||||| ||| |||||||| |||||    
T  39354376 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatatcaagtcaataatgcatactgtcaactaggtca 39354287  T

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Target: chr1; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 48219754 - 48219665
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| ||||||| || |||||| ||||||| |||| |||||||||||||| |||||||||||| |||||    
T  48219754 atcttacatgatattatttatctttgtgaattactagaaaagtatggtcaacgtatatcaagtcaataatgcatattgtcaactaggtca 48219665  T

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Target: chr1; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 24982500 - 24982582
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaac 101  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| | ||||||||||| ||||||||||||    
T  24982500 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatatatattgtcaac 24982582  T

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Target: chr1; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 43680219 - 43680308
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||| | |||||||||||||||| |||||||||| |||| | |||||||||||| | ||||||||||||||||||||||||| |||||    
T  43680219 atcttataagatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtca 43680308  T

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Target: chr1; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 47222364 - 47222445
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||| |||||||||||||||||| |||||||||| |||| | |||||||||||||| |||||||||||||||||| ||||    
T  47222364 atcttaaatgatattatttatctttgtgaattagtaaaaaaatatggtcaaagtatgttaagtcaataatgtatattatcaa 47222445  T

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Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 4605145 - 4605229
Alignment:
Q  16 aatatcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||||||||||||||||||||||||| ||||||| ||  ||| | ||| |||||||||| |||||||||||||||||||||||    
T  4605145 aatatcttacatgatattatttatctttgtgaattaataggaaaatatggccaaagtatgtaaagtcaataatgtatattgtcaa 4605229  T

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Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 14075883 - 14075971
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||| ||||||||||| ||| |||||||||| |||| | |||| ||| ||||| ||||||||||||||||||||||||| |||||    
T  14075883 atcttacat-atattatttatatttgtgaattagtagaaaaatatggttaaaatatgttaagtcaataatgtatattgtcaactaggtca 14075971  T

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Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 21034637 - 21034560
Alignment:
Q  23 tacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||||||||||||||| ||| |||||| |||| | |  ||||||||||| |||||||||||||||||||||||    
T  21034637 tacatgatattatttatctttgtgatttagtagaaaaatataatcaaagtatgttaagtcaataatgtatattgtcaa 21034560  T

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Target: chr1; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 41501719 - 41501630
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||| | | ||||||||||  || || || |||||||||||||| ||||||||||||||||| |||| |||||    
T  41501719 atcttacatgatattatttatttgtgtgaattagtaggaatgtatgatcaaagtatgtcaattcaataatgtatattgtgaactaggtca 41501630  T

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Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 50481425 - 50481506
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||||||| ||||||||| |||| |||||||||| ||||   | |||||||||||| | |||||||||||||||||||||    
T  50481425 atcttacatggtattatttacctttgtgaattagtagaaaaaaattgtcaaagtatgttaggtcaataatgtatattgtcaa 50481506  T

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Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 45234951 - 45234872
Alignment:
Q  29 atattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||||| |||||||| | ||||| || |||||| || |||||||||||||| | |||||||||||||||||||| |||||    
T  45234951 atattacttatctttgtaaattaataaaaaagtatgatcaaagtatgtcaaattaataatgtatattgtcaactaggtca 45234872  T

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Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 31971499 - 31971418
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||| |||||||||||||||||| | |||||||| |||| | || ||||| ||||| || | |||||| |||||||||||    
T  31971499 atcttatatgatattatttatctttgttaattagtagaaaaatatgatcaaaatatgttaaattaataatatatattgtcaa 31971418  T

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Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 23330601 - 23330677
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagt-atgtcaagtcaataatgtatat 94  Q
    ||||||||||||||||||||| ||| |||||||| ||||||   | |||||||| |||| ||||||||| |||||||    
T  23330601 atcttacatgatattatttatgtttgtgaattagcataaaaacattgtcaaagtaatgttaagtcaatattgtatat 23330677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 48897034 - 48896950
Alignment:
Q  16 aatatcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||| |||||||||||||| |||||  ||||||| |||| | |||||||| ||| | | |||||||||  ||||||||||    
T  48897034 aatatcttatatgatattatttatgtttatatattagtagaaaaatatggtcaaaatattttaggtcaataatacatattgtcaa 48896950  T

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Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 27990827 - 27990757
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatg 89  Q
    |||||||||||| |||||||| ||| |  ||||||| |||| | |||||||||||||| | ||||||||||    
T  27990827 atcttacatgatgttatttatttttgtatattagtagaaaaatatggtcaaagtatgttaggtcaataatg 27990757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 45299430 - 45299376
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagta 73  Q
    |||||| |||||||||||||||||| |  |||||||||||| | |||||||||||    
T  45299430 atcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagta 45299376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 32968225 - 32968144
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||| |||||||||||||||||| |  |||||||||||| |   |||||| |||||||  |||| | |||||||||||||    
T  32968225 atcttatatgatattatttatctttgtatattagtataaaaatacagtcaaaatatgtcagttcaaaattgtatattgtcaa 32968144  T

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Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 50295892 - 50295973
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    |||||| |||||||||||||||||| |  ||||| | |||| | ||| |||||||||||| ||||| |||| | ||||||||    
T  50295892 atcttatatgatattatttatctttgtatattagcagaaaaatatgggcaaagtatgtcaggtcaaaaatgcaaattgtcaa 50295973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 52163610 - 52163683
Alignment:
Q  29 atattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||| |||||  ||||||| |||| | || ||||||||||||| ||||| |||| | ||||||||||    
T  52163610 atattatttatatttatatattagtaaaaaaatatgatcaaagtatgtcatgtcaacaatgcacattgtcaact 52163683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 32565895 - 32565927
Alignment:
Q  19 atcttacatgatattatttatctttatgaatta 51  Q
    ||||||||||||||||||||||||| |||||||    
T  32565895 atcttacatgatattatttatctttgtgaatta 32565927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 38737933 - 38737869
Alignment:
Q  30 tattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatat 94  Q
    |||||||||||||| |||||||||| |||| | || | ||||||||| || |||||||| |||||    
T  38737933 tattatttatctttgtgaattagtagaaaaatatgattaaagtatgttaaatcaataatatatat 38737869  T

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Target: scaffold0459 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 12901 - 12990
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12901 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 12990  T

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Target: scaffold0366 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 10542 - 10631
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10542 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 10631  T

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Target: scaffold0366; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 14208 - 14297
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| | |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14208 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 14297  T

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Target: scaffold0051 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 41329 - 41246
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 102  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||    
T  41329 atcttacatgatattatttatctttgtgaattagtataaaagtatggttaaagtatgtcaagtcaataacgtatattgtcaact 41246  T

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Target: scaffold0092 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 44220 - 44131
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||    
T  44220 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtca 44131  T

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Target: scaffold0007 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 15328 - 15239
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| | |||||||| |  ||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  15328 atcttacatgatattatttatctttgtaaattagtagactagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtca 15239  T

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Target: scaffold0027 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 117470 - 117559
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| |||||||||||||  |||||||||||| |||||    
T  117470 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatacatattgtcaactaggtca 117559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 1263 - 1346
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| | ||||||||||      |||||||||||||||||||||||| |||||    
T  1263 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagt------agtcaataatgtatattgtcaactaggtca 1346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 14502 - 14576
Alignment:
Q  34 atttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 108  Q
    |||| ||||| |||||||||| |||| | | |||||||||| |||| |||||||||||||||||||||| |||||    
T  14502 atttttctttgtgaattagtagaaaaatatagtcaaagtatatcaaatcaataatgtatattgtcaactaggtca 14576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 38333 - 38263
Alignment:
Q  30 tattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 100  Q
    ||||||||| |||| ||| |||||| |||| | |||||||||||| | || |||| |||||||||||||||    
T  38333 tattatttacctttgtgacttagtagaaaaatatggtcaaagtattttaaatcaaaaatgtatattgtcaa 38263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 1101 - 1036
Alignment:
Q  19 atcttacatgatattatttatctttatgaattagtataaaagtgtggtcaaagtatgtcaagtcaa 84  Q
    |||||| |||||||||||||||||| |  |||||||||||| |  ||||||| ||||||| |||||    
T  1101 atcttatatgatattatttatctttgtatattagtataaaaatacggtcaaaatatgtcaggtcaa 1036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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