View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13569_high_13 (Length: 335)

Name: NF13569_high_13
Description: NF13569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13569_high_13
NF13569_high_13
[»] chr1 (30 HSPs)
chr1 (16-335)||(5497901-5498220)
chr1 (20-335)||(48072432-48072747)
chr1 (20-335)||(32352318-32352633)
chr1 (16-331)||(25504002-25504317)
chr1 (16-318)||(17708873-17709175)
chr1 (16-207)||(26721448-26721639)
chr1 (16-330)||(10710215-10710528)
chr1 (25-158)||(6051427-6051560)
chr1 (16-316)||(7395747-7396045)
chr1 (16-255)||(20796475-20796714)
chr1 (110-316)||(7395352-7395558)
chr1 (16-150)||(39431101-39431235)
chr1 (16-158)||(47622260-47622402)
chr1 (16-150)||(49264156-49264290)
chr1 (25-140)||(51052705-51052820)
chr1 (25-139)||(1247788-1247902)
chr1 (16-158)||(35541849-35541991)
chr1 (16-133)||(3544309-3544426)
chr1 (27-139)||(45271067-45271176)
chr1 (27-139)||(13867042-13867154)
chr1 (25-133)||(20987979-20988086)
chr1 (25-190)||(19014133-19014299)
chr1 (16-140)||(28358706-28358830)
chr1 (16-100)||(33259943-33260027)
chr1 (16-100)||(33280102-33280186)
chr1 (16-85)||(5809396-5809465)
chr1 (27-102)||(44890254-44890329)
chr1 (16-106)||(3074559-3074649)
chr1 (28-102)||(21409068-21409142)
chr1 (25-102)||(48434974-48435051)
[»] chr6 (30 HSPs)
chr6 (16-335)||(26206148-26206467)
chr6 (20-335)||(15674651-15674966)
chr6 (16-331)||(11059872-11060187)
chr6 (25-165)||(33640741-33640881)
chr6 (16-331)||(502549-502857)
chr6 (16-331)||(17078077-17078392)
chr6 (20-235)||(21549666-21549880)
chr6 (16-158)||(13086358-13086500)
chr6 (16-254)||(649160-649398)
chr6 (21-136)||(10362966-10363081)
chr6 (16-234)||(11469388-11469600)
chr6 (25-158)||(2554429-2554562)
chr6 (16-154)||(21629309-21629447)
chr6 (16-100)||(14843378-14843462)
chr6 (25-126)||(26514549-26514650)
chr6 (27-139)||(14686210-14686322)
chr6 (16-139)||(13938533-13938656)
chr6 (18-145)||(18681770-18681897)
chr6 (25-140)||(32186507-32186622)
chr6 (16-154)||(17576904-17577042)
chr6 (16-154)||(17605521-17605659)
chr6 (16-126)||(19350759-19350869)
chr6 (56-132)||(12608295-12608371)
chr6 (18-142)||(12673318-12673442)
chr6 (16-139)||(25351038-25351161)
chr6 (84-158)||(15956159-15956233)
chr6 (16-85)||(13563186-13563255)
chr6 (36-100)||(19616120-19616184)
chr6 (19-106)||(1104182-1104269)
chr6 (90-133)||(22522040-22522083)
[»] chr2 (28 HSPs)
chr2 (16-335)||(13551397-13551716)
chr2 (16-325)||(25380409-25380719)
chr2 (20-240)||(28399651-28399871)
chr2 (16-233)||(15018492-15018709)
chr2 (16-158)||(8065444-8065586)
chr2 (16-158)||(35488653-35488795)
chr2 (16-150)||(11233680-11233814)
chr2 (16-154)||(45422335-45422473)
chr2 (23-156)||(28253551-28253684)
chr2 (16-145)||(33515389-33515518)
chr2 (16-255)||(9668092-9668331)
chr2 (25-150)||(12646374-12646499)
chr2 (25-126)||(22724654-22724755)
chr2 (25-140)||(6824235-6824348)
chr2 (279-331)||(22724508-22724560)
chr2 (27-115)||(26147041-26147129)
chr2 (25-158)||(10289249-10289382)
chr2 (16-140)||(33583629-33583753)
chr2 (27-142)||(2207021-2207136)
chr2 (27-142)||(13416512-13416627)
chr2 (27-122)||(34357634-34357729)
chr2 (27-115)||(10689364-10689452)
chr2 (16-102)||(20946828-20946914)
chr2 (25-102)||(2282606-2282683)
chr2 (25-106)||(4222175-4222256)
chr2 (16-145)||(32191871-32192000)
chr2 (17-142)||(44028412-44028537)
chr2 (27-115)||(43311085-43311173)
[»] chr4 (43 HSPs)
chr4 (20-335)||(20675854-20676169)
chr4 (20-335)||(55299440-55299755)
chr4 (20-323)||(23872495-23872798)
chr4 (16-331)||(29552811-29553126)
chr4 (16-331)||(19648510-19648825)
chr4 (16-254)||(8935889-8936127)
chr4 (16-233)||(19115251-19115468)
chr4 (16-331)||(34976756-34977071)
chr4 (16-330)||(10562335-10562649)
chr4 (20-238)||(26694747-26694965)
chr4 (16-331)||(42779065-42779380)
chr4 (25-158)||(23641774-23641907)
chr4 (16-158)||(1827723-1827865)
chr4 (16-254)||(7662395-7662633)
chr4 (25-158)||(23647432-23647565)
chr4 (16-247)||(42952625-42952856)
chr4 (25-158)||(47419628-47419761)
chr4 (26-158)||(19756092-19756224)
chr4 (26-158)||(19783582-19783714)
chr4 (16-145)||(19733184-19733313)
chr4 (16-139)||(2072355-2072478)
chr4 (26-141)||(2365830-2365945)
chr4 (22-139)||(9691244-9691361)
chr4 (25-142)||(40688905-40689022)
chr4 (108-331)||(20396472-20396695)
chr4 (16-123)||(3129194-3129301)
chr4 (60-158)||(11586366-11586464)
chr4 (27-133)||(29327989-29328095)
chr4 (16-150)||(48312909-48313043)
chr4 (63-145)||(55724903-55724985)
chr4 (27-112)||(38296531-38296616)
chr4 (17-126)||(53486144-53486253)
chr4 (179-254)||(3129082-3129157)
chr4 (27-142)||(19162368-19162483)
chr4 (25-100)||(29133687-29133762)
chr4 (25-95)||(15342644-15342714)
chr4 (16-100)||(55464122-55464206)
chr4 (293-328)||(23641604-23641639)
chr4 (293-328)||(23647262-23647297)
chr4 (293-328)||(47419896-47419931)
chr4 (219-325)||(9691441-9691547)
chr4 (21-98)||(12079157-12079234)
chr4 (16-85)||(43516004-43516073)
[»] chr8 (32 HSPs)
chr8 (26-331)||(16375113-16375418)
chr8 (16-330)||(4987076-4987390)
chr8 (16-330)||(36157969-36158282)
chr8 (17-331)||(17659657-17659971)
chr8 (17-158)||(23942903-23943044)
chr8 (25-158)||(7925210-7925343)
chr8 (16-325)||(45254856-45255165)
chr8 (16-154)||(7453167-7453305)
chr8 (16-195)||(43611337-43611516)
chr8 (19-148)||(6901755-6901885)
chr8 (16-158)||(41664551-41664693)
chr8 (16-154)||(43612372-43612510)
chr8 (25-158)||(32267378-32267511)
chr8 (16-139)||(11393533-11393656)
chr8 (16-115)||(12332663-12332762)
chr8 (16-139)||(24794535-24794658)
chr8 (16-139)||(43249006-43249129)
chr8 (16-150)||(13878678-13878812)
chr8 (27-141)||(36493207-36493321)
chr8 (25-150)||(8300627-8300752)
chr8 (16-158)||(9923416-9923558)
chr8 (25-154)||(12135047-12135174)
chr8 (16-154)||(17700295-17700433)
chr8 (25-139)||(26774449-26774563)
chr8 (33-154)||(20825132-20825253)
chr8 (16-76)||(29721176-29721236)
chr8 (16-82)||(15539872-15539938)
chr8 (293-328)||(7925478-7925513)
chr8 (288-331)||(36493468-36493511)
chr8 (63-96)||(21312415-21312448)
chr8 (178-254)||(11393425-11393501)
chr8 (25-85)||(12341391-12341451)
[»] chr7 (27 HSPs)
chr7 (20-335)||(13440877-13441192)
chr7 (16-331)||(45993391-45993706)
chr7 (16-331)||(34232516-34232831)
chr7 (20-254)||(43572360-43572594)
chr7 (25-158)||(4937311-4937444)
chr7 (16-330)||(4078092-4078402)
chr7 (20-254)||(18768227-18768456)
chr7 (16-154)||(46626637-46626775)
chr7 (8-106)||(33820794-33820893)
chr7 (25-148)||(41340373-41340496)
chr7 (16-158)||(17721450-17721592)
chr7 (16-154)||(36227338-36227476)
chr7 (16-103)||(22818955-22819042)
chr7 (27-126)||(27218337-27218436)
chr7 (16-250)||(12378059-12378293)
chr7 (16-158)||(29968789-29968931)
chr7 (27-140)||(45164748-45164861)
chr7 (27-115)||(41804985-41805073)
chr7 (27-115)||(25018528-25018616)
chr7 (51-108)||(23887823-23887880)
chr7 (293-328)||(4937141-4937176)
chr7 (16-126)||(11276463-11276573)
chr7 (28-102)||(17056356-17056430)
chr7 (16-58)||(19735333-19735375)
chr7 (51-108)||(23898999-23899056)
chr7 (272-325)||(28172999-28173052)
chr7 (25-97)||(28740179-28740251)
[»] chr3 (38 HSPs)
chr3 (26-235)||(6175583-6175792)
chr3 (19-331)||(43120684-43120996)
chr3 (17-331)||(23819381-23819695)
chr3 (20-235)||(42674544-42674759)
chr3 (16-154)||(24925872-24926010)
chr3 (16-331)||(50545058-50545373)
chr3 (17-330)||(46907681-46907994)
chr3 (16-150)||(48569214-48569348)
chr3 (25-158)||(2365102-2365235)
chr3 (15-139)||(21739690-21739814)
chr3 (19-325)||(14863472-14863778)
chr3 (16-150)||(10868459-10868593)
chr3 (16-254)||(30166410-30166648)
chr3 (16-158)||(34331998-34332140)
chr3 (20-241)||(36709728-36709949)
chr3 (16-139)||(31675746-31675869)
chr3 (26-140)||(19876068-19876182)
chr3 (25-139)||(31920554-31920668)
chr3 (25-144)||(19919426-19919545)
chr3 (16-129)||(15480970-15481083)
chr3 (27-139)||(40512926-40513038)
chr3 (16-139)||(962365-962488)
chr3 (16-154)||(19891492-19891630)
chr3 (28-140)||(14309406-14309518)
chr3 (33-154)||(12341442-12341563)
chr3 (25-150)||(16179764-16179889)
chr3 (22-121)||(17270962-17271061)
chr3 (29-139)||(34830220-34830331)
chr3 (16-139)||(53942061-53942184)
chr3 (16-69)||(47538082-47538135)
chr3 (27-115)||(16672247-16672335)
chr3 (293-328)||(2365370-2365405)
chr3 (27-141)||(6825638-6825752)
chr3 (16-82)||(8948278-8948344)
chr3 (28-102)||(44888731-44888805)
chr3 (25-139)||(55367433-55367547)
chr3 (28-112)||(7164315-7164399)
chr3 (27-139)||(52250327-52250439)
[»] chr5 (38 HSPs)
chr5 (16-262)||(22094328-22094574)
chr5 (20-254)||(30509110-30509344)
chr5 (20-254)||(30549453-30549687)
chr5 (16-331)||(6050055-6050370)
chr5 (16-254)||(35121775-35122013)
chr5 (20-241)||(38358286-38358508)
chr5 (16-254)||(10485989-10486227)
chr5 (17-207)||(20207854-20208044)
chr5 (28-154)||(31865124-31865250)
chr5 (25-158)||(42514544-42514677)
chr5 (25-158)||(30731497-30731630)
chr5 (127-255)||(25591265-25591393)
chr5 (19-154)||(588325-588460)
chr5 (16-139)||(19506813-19506936)
chr5 (16-158)||(23239198-23239340)
chr5 (16-158)||(28534859-28535001)
chr5 (16-150)||(27796299-27796433)
chr5 (16-154)||(33385160-33385298)
chr5 (27-142)||(36256601-36256716)
chr5 (26-98)||(19838390-19838462)
chr5 (16-139)||(380716-380839)
chr5 (16-154)||(25856626-25856764)
chr5 (25-73)||(29572138-29572186)
chr5 (25-73)||(29573515-29573563)
chr5 (25-73)||(29574892-29574940)
chr5 (25-73)||(29576269-29576317)
chr5 (25-73)||(29577646-29577694)
chr5 (25-73)||(29579023-29579071)
chr5 (16-112)||(42260097-42260193)
chr5 (16-139)||(33170473-33170596)
chr5 (27-141)||(4297509-4297623)
chr5 (27-115)||(21084707-21084795)
chr5 (48-139)||(6886010-6886101)
chr5 (189-331)||(6999973-7000115)
chr5 (25-96)||(35983036-35983107)
chr5 (63-106)||(17697458-17697501)
chr5 (293-328)||(42514812-42514847)
chr5 (27-81)||(19853886-19853940)
[»] scaffold0179 (2 HSPs)
scaffold0179 (16-201)||(8347-8532)
scaffold0179 (16-201)||(13281-13466)
[»] scaffold0007 (1 HSPs)
scaffold0007 (19-331)||(182933-183245)
[»] scaffold0034 (2 HSPs)
scaffold0034 (25-158)||(105026-105159)
scaffold0034 (293-328)||(104856-104891)
[»] scaffold0029 (1 HSPs)
scaffold0029 (28-254)||(133932-134158)
[»] scaffold0002 (1 HSPs)
scaffold0002 (28-254)||(311760-311986)
[»] scaffold0131 (1 HSPs)
scaffold0131 (16-328)||(3561-3873)
[»] scaffold0418 (1 HSPs)
scaffold0418 (16-154)||(8419-8557)
[»] scaffold1350 (1 HSPs)
scaffold1350 (25-150)||(368-493)
[»] scaffold0472 (1 HSPs)
scaffold0472 (16-158)||(4067-4209)
[»] scaffold0061 (1 HSPs)
scaffold0061 (27-115)||(55491-55579)
[»] scaffold0017 (1 HSPs)
scaffold0017 (27-115)||(143054-143142)
[»] scaffold0016 (1 HSPs)
scaffold0016 (27-115)||(28600-28688)
[»] scaffold0189 (1 HSPs)
scaffold0189 (16-81)||(6906-6971)
[»] scaffold0048 (1 HSPs)
scaffold0048 (27-140)||(63501-63614)
[»] scaffold0026 (1 HSPs)
scaffold0026 (25-133)||(67904-68012)


Alignment Details
Target: chr1 (Bit Score: 296; Significance: 1e-166; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 16 - 335
Target Start/End: Original strand, 5497901 - 5498220
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5497901 ctgatggagctttgaagaaggaaattgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 5498000  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5498001 ccaacccgacagtctagatttaatacgattcacaataggttcccagaaacgcaatcttcgaggattaccaccaataggcatacccagatacaagaaagga 5498100  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttca 315  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5498101 acgttacctactttacaacttaacacggaagcagcctcatgtaaccaagacgacgcaatattcaccccaacaagcatactcttatgaaaattcactttca 5498200  T
Q  316 aacccgacatagcctcgaac 335  Q
    ||||||||||||||||||||    
T  5498201 aacccgacatagcctcgaac 5498220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 20 - 335
Target Start/End: Complemental strand, 48072747 - 48072432
Alignment:
Q  20 tggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaa 119  Q
    |||| |||||||||||||||| ||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  48072747 tggagctttgaagaaggaaagcgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaaaccgactattccaa 48072648  T
Q  120 cccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgt 219  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||| |||||||||||||| ||      
T  48072647 cccgacagtctagatttaatacgattcacaataggttcccagaaacacaatcttcgagggttaccaccaataggcatacctaggtacaagaaagggacag 48072548  T
Q  220 tacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttcaaacc 319  Q
    | || ||||||||||| ||||| || ||||| |||| |||||| |||||| |||||||||||   || ||||||||||||||||||||||||||||||||    
T  48072547 ttccaactttacaactcaacacggatgcagcttcatataaccaggacgacccaatattcacctccaccagcatactcttatgaaaattcactttcaaacc 48072448  T
Q  320 cgacatagcctcgaac 335  Q
    ||||||||||||||||    
T  48072447 cgacatagcctcgaac 48072432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 20 - 335
Target Start/End: Complemental strand, 32352633 - 32352318
Alignment:
Q  20 tggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaa 119  Q
    |||| |||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  32352633 tggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaaaccgactattccaa 32352534  T
Q  120 cccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgt 219  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||  |||||||||||||| ||||| |||||||||||||| ||      
T  32352533 cccgacagtctagatttaatacaattcacaataggttcccagaaacacaatcttcgagtgttaccaccaataggaatacctaggtacaagaaagggacag 32352434  T
Q  220 tacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttcaaacc 319  Q
    | || ||||||||||| ||||| || ||||| |||| |||||| ||| || ||||||||||||  || ||||||||||||||||||||||||||||||||    
T  32352433 ttccaactttacaactcaacacggatgcagcttcatataaccaggacaacccaatattcacccccaccagcatactcttatgaaaattcactttcaaacc 32352334  T
Q  320 cgacatagcctcgaac 335  Q
    ||||||||||||||||    
T  32352333 cgacatagcctcgaac 32352318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 331
Target Start/End: Complemental strand, 25504317 - 25504002
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||||||||| ||||| ||||||||||| | ||||||||  |||||||||||||||||||| || ||||||||||| || || ||||||||    
T  25504317 ctgacggagctttgaagaaagaaagagcatagacaggaagagaggtcaacacagatttgagaagaaccaaacggccaccaaaagagaggaaacgactatt 25504218  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| |||||||||||||| ||||||||||||| |||  || || ||| ||| |  ||||||||||||||||| |||||||||| ||| ||||||||     
T  25504217 ccaacctgacagtctagattttatacgattcacaacagggacccaggaacacaaacgacgaggattaccaccaatcggcatacccaagtataagaaaggc 25504118  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttca 315  Q
    || ||  | ||||||||| | | |||||| |||||||||  ||||||||| || ||||| || |||| ||| |||| |||||||| |||||| |||||||    
T  25504117 accttttccactttacaattaagcacagacgcagcctcaactaaccaagaagatgcaatgttaaccccaaccagcaaactcttattaaaattaactttca 25504018  T
Q  316 aacccgacatagcctc 331  Q
    |||| |||| ||||||    
T  25504017 aaccagacaaagcctc 25504002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 318
Target Start/End: Original strand, 17708873 - 17709175
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| || |    |||||  || || |||||||||||||| ||||||||    
T  17708873 ctgatggagctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagactttaactaaaccagacggccgccaaaagatagaaaacgactatt 17708972  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| ||||  |||| ||| |||||||||||||  |||||| | |||| ||| |  |||| ||| || || ||||| |  |||| |||||| || ||     
T  17708973 ccaaccagacaacctagcttttatacgattcacaaatggttcccaaaaactcaaacgccgagaatttcccccgataggaaagcccaagtacaaaaacggc 17709072  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaacaagcatactcttatgaaaattcactttc 314  Q
    || ||||| ||||| ||| |||| ||||| || ||||||  ||||||||| || || |||||||| || | ||||| ||||||||||||||||||| |||    
T  17709073 accttacccactttgcaatttaaaacagacgccgcctcacttaaccaagaagaagcgatattcacaccaaccaagc-tactcttatgaaaattcaccttc 17709171  T
Q  315 aaac 318  Q
    ||||    
T  17709172 aaac 17709175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 207
Target Start/End: Original strand, 26721448 - 26721639
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||||||||| | || | ||||||||  || || ||| |||||| ||| ||||||||    
T  26721448 ctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcaggacaaactttaaaagaaccagacggccgccataagataaaaaacgactatt 26721547  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtaca 207  Q
    |||||| ||||  |||| |||||| |||||||||||||||||| | |||| ||| |   ||| ||| || |||||||||||||||| |||||    
T  26721548 ccaaccagacaacctagttttaatgcgattcacaataggttcccaaaaactcaaacgctgagaatttcccccaataggcatacccaagtaca 26721639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 330
Target Start/End: Complemental strand, 10710528 - 10710215
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||| | |||||||||| |||||||||||| || || || |  ||||| |  || || |||||||||| ||| ||||||||    
T  10710528 ctgatggagctttgaagaaggaa-gcgcatagacagacaaagaggtcagaaccgactttaacagaactagacggccgccaaaagataaaaaacgactatt 10710430  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| | ||  |||| ||| || |||||||||||||||||| | |||| ||| |  |||| ||| ||  | ||||||||||| | |||||| || ||     
T  10710429 ccaaccagtcaacctagcttttatgcgattcacaataggttcccaaaaactcaagcgccgagaatttccctcgataggcatacctaagtacaaaaatggt 10710330  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaa-caagcatactcttatgaaaattcactttc 314  Q
    || || || ||||| |||||||| |||||||| ||||||  ||||||||| |  || |||||||| | || |||||  |||||||||||||||||| |||    
T  10710329 accttgcccactttccaacttaaaacagaagccgcctcacttaaccaagaaggagcgatattcacacaaaccaagc-cactcttatgaaaattcaccttc 10710231  T
Q  315 aaacccgacatagcct 330  Q
    ||||| ||||||||||    
T  10710230 aaaccagacatagcct 10710215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 6051427 - 6051560
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| || ||||||| ||| |||||||| |||||||| |||||||| | |||||| ||    
T  6051427 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgactttgccaaccaga 6051526  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  6051527 caatctagatttaatacgatccaccacaggttcc 6051560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 316
Target Start/End: Complemental strand, 7396045 - 7395747
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| ||||||||||||||||  ||||||||| ||||||||||| |||||| || |  | |||||| || || ||||| || ||||| ||||| ||    
T  7396045 ctgatggagctttgaagaaggaaagatcatagacagacaaagaggtcaagacagactttaacaaaaccaaacggccgccaaaggagagaaaacgactctt 7395946  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| |||   ||||  |||||||||||||||||||| ||  |||||| |||||  |||||||||   |||||||||| |||||  |||| ||||||     
T  7395945 ccaaccagac--cctagccttaatacgattcacaataggatctcagaaactcaatcgccgaggattatatccaataggcagacccaactacatgaaaggc 7395848  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttca 315  Q
    || ||||| || || |||||||| ||||  ||  |||||| ||||||||| |  || || ||||| | ||| | ||||||||||  ||||||||||||||    
T  7395847 accttacccaccttgcaacttaaaacagctgcgacctcatttaaccaagagggggcgatgttcacaccaaccaacatactcttagaaaaattcactttca 7395748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 255
Target Start/End: Original strand, 20796475 - 20796714
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||| ||||||||||| ||||||||||| ||||| ||||| || | ||| | ||| |||||||||||||| || || ||||| ||||||||    
T  20796475 ctgatggagctttaaagaaggaaagagcatagacaggaaaagaagtcagaactgctttcaaaaggaccaagcgaccaccgaacgagagaaatcgactatt 20796574  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaa-tcttcgaggattaccaccaataggcatacccaggtacaagaaagg 214  Q
    |||||| |||| |||||||||||| | |||||||| ||| ||| | ||| | ||  |  |  |||||||| || ||||| | ||| ||||||| ||||||    
T  20796575 ccaacctgacaatctagatttaattctattcacaacagggtccca-aaatgaaagacgacacggattaccccctataggtaaaccaaggtacatgaaagg 20796673  T
Q  215 aacgttacctactttacaacttaacacagaagcagcctcat 255  Q
    ||  || || ||||||||||||||||| ||||| |||||||    
T  20796674 aatcttgcccactttacaacttaacaccgaagccgcctcat 20796714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 110 - 316
Target Start/End: Complemental strand, 7395558 - 7395352
Alignment:
Q  110 actattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaag 209  Q
    |||| ||||||| ||||  ||||  |||||||||||||||||||| ||  |||||| ||||| |||||||||||| |||||||||| |||||  |||| |    
T  7395558 actactccaaccagacatcctagccttaatacgattcacaataggatctcagaaactcaatcgtcgaggattacctccaataggcagacccaactacatg 7395459  T
Q  210 aaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattca 309  Q
    ||||  || |||||||| || ||||||||  |||  || ||||||| ||||||||| |  || || ||||| | ||| | ||||||||||| ||||||||    
T  7395458 aaagacaccttacctaccttgcaacttaaatcagccgctgcctcatttaaccaagagggggcgatgttcacaccaaccaacatactcttataaaaattca 7395359  T
Q  310 ctttcaa 316  Q
    |||||||    
T  7395358 ctttcaa 7395352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 39431101 - 39431235
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||| || |||||||| |||||||||||||| ||  ||||||| | ||| | ||| |||||||||||||| || || ||||||||||||||    
T  39431101 ctgatggagctttaaataaggaaagagcatagacaggcaacgaattcaggactgctttcaaaaggaccaagcgaccaccgaacgagagaaaccgactatt 39431200  T
Q  116 ccaacccgacagtctagatttaatacgattcacaa 150  Q
    |||||| |||| |||||||||||| | ||||||||    
T  39431201 ccaacctgacaatctagatttaattctattcacaa 39431235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 47622402 - 47622260
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||||||||||||| | ||  ||||||||||| || ||||| |  | ||||||||||||||| ||||||||||||      
T  47622402 ctgacggagctttgaaaaaggaaagtgcatagacaggaagagcagtcaggacagactttagaaggattaggcgaccaccaaaagagagaaaccgactacg 47622303  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||| |||| |||||||||||| ||||| |||| |||||||    
T  47622302 ccaaccagacaatctagatttaattcgattaacaacaggttcc 47622260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 49264290 - 49264156
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||| ||||| ||||| |||||||||||||| || ||||| || | ||| | ||| |||||||||||||| || || ||||||||||||||    
T  49264290 ctgatggagctttaaagaaagaaagagcatagacaggcaacgaagtcagaactgctttcaaaaggaccaagcgaccaccgaacgagagaaaccgactatt 49264191  T
Q  116 ccaacccgacagtctagatttaatacgattcacaa 150  Q
    ||||||  ||| |||||||||||| | ||||||||    
T  49264190 ccaacctaacaatctagatttaattctattcacaa 49264156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 51052705 - 51052820
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  |||||||| || || || |||| ||| |||||||| |||||||| |||||||| | |||||| ||    
T  51052705 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacggactttagtagaatcaaacgaccaccgaaagataggaaccgactttgccaaccaga 51052804  T
Q  125 cagtctagatttaata 140  Q
    || |||||||||||||    
T  51052805 caatctagatttaata 51052820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 1247902 - 1247788
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||| |||||||| ||||||||| | || |||||||||||||| |||||||||||||| ||  | |||||||| ||||| ||||| | ||| |||||    
T  1247902 ctttgaaaaaggaaagagcatagacatgtaacgaggtcaggacagacttgagaagaaccaaccgggctccaaaagagagaaagcgactttgccaccccga 1247803  T
Q  125 cagtctagatttaat 139  Q
     |||||||| |||||    
T  1247802 tagtctagacttaat 1247788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 35541849 - 35541991
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||||||||||||| | ||  |||||||| || || ||||||| ||| || ||||| || || ||||||||||| |     
T  35541849 ctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatcaaacggccacctaaggaaagaaaccgactttg 35541948  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||| | || |||| |||||||||| ||||||| |||||||    
T  35541949 ccaaccagccaatctatatttaatacggttcacaacaggttcc 35541991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 3544426 - 3544309
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||||||||||||||| |||||||||||||| ||||||| |||||  |||||||||| ||| ||||| |||||||| ||| | ||||| |     
T  3544426 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagtcttgagaagaatcaaccgacccccaaaagagagagagcgactttg 3544327  T
Q  116 ccaacccgacagtctaga 133  Q
    ||| ||||| | ||||||    
T  3544326 ccaccccgataatctaga 3544309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 139
Target Start/End: Original strand, 45271067 - 45271176
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| | |||||||| |||||| || || |||||||| || |||||||| |||   |||||||||||  |||| ||||    
T  45271067 ttgaagaaggaaagagcatagacaggaagagaggtcaagacagacttaaggagaaccaaccggccaccaaacgat---aaccgactattgaaacctgaca 45271163  T
Q  127 gtctagatttaat 139  Q
    |||| ||||||||    
T  45271164 gtctcgatttaat 45271176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 13867154 - 13867042
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||| ||||| || |  ||||||||||| || ||||| ||||| ||||| |||||||| ||||| ||||| |  || ||| |||    
T  13867154 ttgaagaaggaaagagcatatacaggtaatgcagtcaggacagacttaagaaggaccaaccgacctccaaaagagagaaaacgactttgtcaccccaaca 13867055  T
Q  127 gtctagatttaat 139  Q
    |||||||||||||    
T  13867054 gtctagatttaat 13867042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 20987979 - 20988086
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||| ||||||||||| |  |||||||||||| | |||||||||||||| ||||| || || || ||||| | ||| ||||| |||||    
T  20987979 ctttgaagaaggaaagagcatagacaggtagcgaggtcaggacacacttgagaagaaccaaccgacc-ccgaaggagagaaaacaacttttccaccccga 20988077  T
Q  125 cagtctaga 133  Q
    || ||||||    
T  20988078 caatctaga 20988086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 190
Target Start/End: Complemental strand, 19014299 - 19014133
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattcca-acccg 123  Q
    |||||||||||||||| ||||||||| | |   |||||| |||| | |||||||  ||||| || || ||||||||||||||  |||||| |||  ||||    
T  19014299 ctttgaagaaggaaagagcatagacaagaagccaggtcaagacaaacttgagaaagaccaaccggcccccaaaagatagaaagtgactatgccacccccg 19014200  T
Q  124 acagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaat 190  Q
    ||||||||| |||||||  |||||  ||||||||| | |||   || |||||||||| |||||||||    
T  19014199 acagtctagttttaatagtattcatcataggttcccaaaaatctaaccttcgaggatcaccaccaat 19014133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 28358706 - 28358830
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||||||||||||||| ||||||||| | |  || || |||||| | || ||||||| ||||||||| || || |||||||| ||||| |     
T  28358706 ctgacggagctttgaagaaggaaagagcatagacatgaagcgatgttaggacaaacttaagaagaatcaagcgacccccgaaggatagaaaacgactttg 28358805  T
Q  116 ccaacccgacagtctagatttaata 140  Q
    ||| ||||| | |||||||||||||    
T  28358806 ccaccccgataatctagatttaata 28358830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 33260027 - 33259943
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaaga 100  Q
    |||| ||| |||||||||||||||| ||||||||||| | |||| ||| |||||| || |||||||| |  ||||||||||||||    
T  33260027 ctgagggagctttgaagaaggaaagagcatagacagggagagagatcaagacagacttaagaagaacaagacgaccaccaaaaga 33259943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 33280186 - 33280102
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaaga 100  Q
    |||| ||| |||||||||||||||| ||||||||||| | |||| ||| |||||| || |||||||| |  ||||||||||||||    
T  33280186 ctgagggagctttgaagaaggaaagagcatagacagggagagagatcaagacagacttaagaagaacaagacgaccaccaaaaga 33280102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 5809396 - 5809465
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaa 85  Q
    |||| ||| |||||||||||||||| ||||||||||| || | |||||||||||| || ||||| |||||    
T  5809396 ctgacggagctttgaagaaggaaagagcatagacaggtaacgcggtcaggacagacttaagaaggaccaa 5809465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 44890254 - 44890329
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagata 102  Q
    |||||||| ||||| ||||| ||||||| ||| | || ||||||||| |  |||||||| ||||||||||||||||    
T  44890254 ttgaagaaagaaagagcataaacaggcatagatgacaagacagatttcaacagaaccaaacgaccaccaaaagata 44890329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 3074559 - 3074649
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    |||||||| || ||||||||||||| ||||||||| | | ||||| ||||| |   || || |||||||  ||||||||||||||||||||    
T  3074559 ctgatggagctctgaagaaggaaagggcatagacatgaagagaggacaggaaaaccttaaggagaaccagacgaccaccaaaagatagaaa 3074649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 21409068 - 21409142
Alignment:
Q  28 tgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagata 102  Q
    ||||||||||||   |||||||||| | ||||| ||||||||| || || |||||||  ||||||||||||||||    
T  21409068 tgaagaaggaaaaaacatagacaggaagagaggacaggacagacttaaggagaaccagacgaccaccaaaagata 21409142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 48434974 - 48435051
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagata 102  Q
    ||||||| |||||||| || ||||||||||| || | |||||||||||| | ||||| |||||| || ||| ||||||    
T  48434974 ctttgaaaaaggaaagagcgtagacaggcaatgaagacaggacagattttaaaagaatcaagcggcccccataagata 48435051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 284; Significance: 1e-159; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 16 - 335
Target Start/End: Original strand, 26206148 - 26206467
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26206148 ctgatggagctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 26206247  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26206248 ccaacccgacagtctagatttaatacgattcacaataggttcccagaaacacaatcttcgaggattaccaccaataggcatacccagatacaagaaagga 26206347  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttca 315  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||    
T  26206348 acgttacctactttacaacttaacacggaagcagcctcatgtaaccaagactacgcaatattcaccccaataagcatactcttatgaaaattcactttca 26206447  T
Q  316 aacccgacatagcctcgaac 335  Q
    ||||||||||||| ||||||    
T  26206448 aacccgacatagcttcgaac 26206467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 20 - 335
Target Start/End: Original strand, 15674651 - 15674966
Alignment:
Q  20 tggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaa 119  Q
    |||| |||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||| |||||||||||||||| |||||||| |||||||||    
T  15674651 tggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaacccagcgaccaccaaaagagagaaaccgtctattccaa 15674750  T
Q  120 cccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgt 219  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||      
T  15674751 cccgacagtctagatttaatacgattcacaataggttcccagaaacacaatcttcgagggttaccaccaataggcatacctaggtacaagaaaggaacaa 15674850  T
Q  220 tacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttcaaacc 319  Q
    | |||||||||||||  ||||| |||||||| |||| ||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||    
T  15674851 ttcctactttacaacacaacacggaagcagcttcatttaaccaagacgacccaatattcacccccacaagcatactcttatgaaaattcactttcaaacc 15674950  T
Q  320 cgacatagcctcgaac 335  Q
     ||||| |||||||||    
T  15674951 tgacatcgcctcgaac 15674966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 16 - 331
Target Start/End: Complemental strand, 11060187 - 11059872
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| || |  | |||||  || ||||||||||||| ||| ||||| ||    
T  11060187 ctgatggaactttgaagaaggaaagcgcatagacaggcaaaaaggtcaggacagactttaacaaaaccagacggccaccaaaagataaaaaacgactgtt 11060088  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| ||||  |||| ||| ||||||||||||||||| ||| |||||| ||| |  |||| ||| || |  ||||||||||| | |||||  || ||     
T  11060087 ccaaccagacaacctagcttttatacgattcacaataggatcccagaaactcaaacgccgagaatttcccctgataggcatacctaagtacataaacggc 11059988  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaacaagcatactcttatgaaaattcactttc 314  Q
    || || || | ||| || | ||| | ||| || ||||||  ||||||||| || || |||||||| || | ||||| ||||||||||||||||||| ||     
T  11059987 accttgcccattttgcagcctaaaagagacgccgcctcacttaaccaagaagaagcgatattcacacccaccaagc-tactcttatgaaaattcaccttt 11059889  T
Q  315 aaacccgacatagcctc 331  Q
    ||||| |||||||||||    
T  11059888 aaaccggacatagcctc 11059872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 25 - 165
Target Start/End: Original strand, 33640741 - 33640881
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||| ||||| ||||||||||||| ||||||||  |||||||||||||||||||| || ||||||||||| || || |||||||||||||| ||    
T  33640741 ctttgaagaaagaaagagcatagacaggcagagaggtcaacacagatttgagaagaaccaaacggccaccaaaagagaggaaacgactattccaacctga 33640840  T
Q  125 cagtctagatttaatacgattcacaataggttcctagaaac 165  Q
    ||||||||| || ||||||||||||| ||| ||| ||||||    
T  33640841 cagtctagactttatacgattcacaacagggtcccagaaac 33640881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 331
Target Start/End: Complemental strand, 502857 - 502549
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||||||||| ||||| ||||||||||||| |||||||||  ||||||||||||||||||| || ||        | || || ||||||||    
T  502857 ctgacggagctttgaagaaagaaagagcatagacaggcatagaggtcagcgcagatttgagaagaaccaaacggccc-------agaggaaacgactatt 502765  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| |||||||||| ||| ||||||||||||| ||| ||| |||||| |||    ||||||||||||||||| ||||||||||  || ||||||||     
T  502764 ccaacctgacagtctagtttttatacgattcacaacagggtcccagaaacacaaatgacgaggattaccaccaatcggcatacccaaatataagaaaggc 502665  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttca 315  Q
    || || || ||||||||| ||| |||||| | |||||||  ||||||  | || || || || |||| ||| |||  |||||| || ||||| |||||||    
T  502664 acctttcccactttacaatttagcacagacgtagcctcaaataaccagaaagatgcgatgttaaccccaaccagcgaactcttgtggaaattaactttca 502565  T
Q  316 aacccgacatagcctc 331  Q
    |||| |||| ||||||    
T  502564 aaccagacaaagcctc 502549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 331
Target Start/End: Complemental strand, 17078392 - 17078077
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||||| ||||| |||| || ||||||||| || || || |  |||||||  || || |||||||||| |||  |||||||    
T  17078392 ctgatggagctttgaagaaggaaagcgcataaacagacagagaggtcagaactgactttaacagaaccatacggccgccaaaagataaaaaaagactatt 17078293  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| ||||  |||| ||| || |||||||||||||||||| | |||| ||| |  |||| ||| |  || ||||||||||| |||||||| || ||     
T  17078292 ccaaccagacaacctagcttttattcgattcacaataggttcccaaaaactcaagcgccgagaatttctcccgataggcatacctaggtacaaaaatggc 17078193  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaacaagcatactcttatgaaaattcactttc 314  Q
    || || || ||||| ||||| || ||||| || ||||||  ||||||||| |  | ||||||||| || | ||||| || |||||||||||||||| |||    
T  17078192 accttgcccactttgcaactcaaaacagacgctgcctcacttaaccaagagggggaaatattcacaccaaccaagc-tagtcttatgaaaattcaccttc 17078094  T
Q  315 aaacccgacatagcctc 331  Q
    | ||| |||||||||||    
T  17078093 agaccagacatagcctc 17078077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 235
Target Start/End: Original strand, 21549666 - 21549880
Alignment:
Q  20 tggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaa 119  Q
    |||| |||||||||| ||||| ||||||||| ||| ||| ||||| || |||||||| |||| |||||| ||||||||||| ||||| | ||||||||||    
T  21549666 tggagctttgaagaaagaaagagcatagacaagcagagatgtcagaactgatttgaggagaatcaagcggccaccaaaagagagaaatctactattccaa 21549765  T
Q  120 cccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgt 219  Q
     ||| ||||||||||||||| |||||||  || |||||| | ||  | | ||| || ||||||||||| |||||||  || |||||||| |||||||       
T  21549766 -ccgtcagtctagatttaatgcgattcaagatcggttcccaaaactgaagtctccgtggattaccacctataggcaggcctaggtacaaaaaaggaattc 21549864  T
Q  220 tacctactttacaact 235  Q
    |||| |||||||||||    
T  21549865 tacccactttacaact 21549880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 13086358 - 13086500
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||| ||||||||||| ||||| ||||||||||| ||||| || | ||| | ||| |||||||||||||| || || |||||||| |||||    
T  13086358 ctgatggagctttaaagaaggaaagagcataaacaggcaaagaagtcagaactgctttcaaaaggaccaagcgaccaccgaacgaaagaaaccggctatt 13086457  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||  ||||||||||||||||| | |||||||| |||||||    
T  13086458 ccaacttgacagtctagatttaattctattcacaacaggttcc 13086500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 254
Target Start/End: Complemental strand, 649398 - 649160
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||||| ||||| || |  | |||||  || || |||||||||||||| ||||||||    
T  649398 ctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcagaacagactttaacaaaaccagacggccgccaaaagatagaaaacgactatt 649299  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||  ||||  |||| ||| || ||||||||||| |||||| | ||||  || |  |||| ||| || || ||||||||  ||| |||||| || ||     
T  649298 ccaactagacaacctagcttttatgcgattcacaattggttcccaaaaacttaaacgccgagaatttcccccgataggcatgtccaagtacaaaaacggc 649199  T
Q  216 acgttacctactttacaacttaacacagaagcagcctca 254  Q
    || ||||| ||||| |||||||| ||||| || ||||||    
T  649198 accttacccactttgcaacttaaaacagacgccgcctca 649160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 10362966 - 10363081
Alignment:
Q  21 ggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaac 120  Q
    ||||| |||||||||||||| ||||||||||| | |||||||| |||||| ||||||||||| || ||||||||||| || ||||||||||| ||  | |    
T  10362966 ggaaccttgaagaaggaaagagcatagacaggtagagaggtcaagacagacttgagaagaactaaacgaccaccaaacgacagaaaccgacttttgaacc 10363065  T
Q  121 ccgacagtctagattt 136  Q
    | ||||||||||||||    
T  10363066 ctgacagtctagattt 10363081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 11469388 - 11469600
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||||| |||      || | ||| |||||||| ||||| ||||||| |||||  |||||||| || |||||| | |||||    
T  11469388 ctgatggagctttgaagaaggaaagagca------ggaagagaagtcaggactgattttagaagaatcaagcagccaccaaatgagagaaacaggctatt 11469481  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaa-tcttcgaggattaccaccaataggcatacccaggtacaagaaagg 214  Q
    ||| |||||||||||||||||||| ||||||||||| || ||| | ||||| || |||  ||||||| || || | ||||| ||| || |||||||||||    
T  11469482 ccaccccgacagtctagatttaattcgattcacaatcgggtccca-aaacgaaagtctctgaggatttccccctacaggcaaaccaagatacaagaaagg 11469580  T
Q  215 aacgttacctactttacaac 234  Q
    ||| || || ||||||||||    
T  11469581 aaccttccccactttacaac 11469600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 2554429 - 2554562
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||| |||||||||||||||||||| | ||  ||||||||  | || || |||| ||| |||||||| ||||| || |||||||| |  ||||| ||    
T  2554429 ctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacgaactttagtagaatcaaacgaccaccgaaagaaaggaaccgactttgtcaaccaga 2554528  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||||||||| |||||||    
T  2554529 caatctagatttaatacgattcacaacaggttcc 2554562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 21629447 - 21629309
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||||||||||||| |  |  |||| ||||||||||||||| | ||||||||||||||| || ||  ||| |||||     
T  21629447 ctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagatttgagaagtatcaagcgaccaccaaaggaaaggtacctactatg 21629348  T
Q  116 ccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    |||||| |||| |||||| || |||| ||| ||||||||    
T  21629347 ccaaccagacaatctagactttatacaattaacaatagg 21629309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 14843462 - 14843378
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaaga 100  Q
    |||| ||| |||||||||||||||| |||||||||||||| ||||||| |||||  |||||||||| ||| ||||| ||||||||    
T  14843462 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagtcttgagaagaatcaaccgacccccaaaaga 14843378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 26514549 - 26514650
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||| ||||| ||||||||||| |  ||||||| ||| || || | ||| ||||| |||||||||||||||||||| ||||||| ||| |||||    
T  26514549 ctttgaagaaagaaagagcatagacaggaagcgaggtcaagaccgacttcaaaaggaccaaacgaccaccaaaagatagaaagcgactatgccaccccga 26514648  T
Q  125 ca 126  Q
    ||    
T  26514649 ca 26514650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 14686322 - 14686210
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| || | || ||||||||| || ||||| ||||| ||||| ||| |||| || || ||||| | ||| ||| |||    
T  14686322 ttgaagaaggaaagagcatagacaggtaatgcggacaggacagaattcagaaggaccaaccgacctccataagaaaggaaacgactttgccaccccaaca 14686223  T
Q  127 gtctagatttaat 139  Q
    |||||||||||||    
T  14686222 gtctagatttaat 14686210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 13938533 - 13938656
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||| ||||||| ||| |  |  |||||||||||||||||||| | ||| || ||||||||||| || ||||||||||     
T  13938533 ctgacggagctttgaaaaaggaaagagcatagataggaagtgcagtcaggacagatttgagaaggatcaatcggccaccaaaagaaaggaaccgactatg 13938632  T
Q  116 ccaacccgacagtctagatttaat 139  Q
    || ||| |||| ||||| ||||||    
T  13938633 ccgaccagacaatctagctttaat 13938656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 18681897 - 18681770
Alignment:
Q  18 gatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattcc 117  Q
    |||||| ||||||| |||||||| || |||||||| |     ||||||||||||||||| || | ||| |||||||||||| | || |||||||||| ||    
T  18681897 gatggagctttgaaaaaggaaagagcgtagacaggaagtctagtcaggacagatttgagcaggatcaaacgaccaccaaaataaaggaaccgactatgcc 18681798  T
Q  118 aacccgacagtctagatttaatacgatt 145  Q
    |||| | || ||||| ||||||||||||    
T  18681797 aaccagtcaatctagctttaatacgatt 18681770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 32186507 - 32186622
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||| ||||| |  |||||||| |  |||||||||||||| || ||||||| |||||| || |||||||||||||| ||||| | |||    ||    
T  32186507 ctttgaagaaagaaagagtgtagacaggaagcgaggtcaggacagacttaagaagaatcaagcggcccccaaaagatagaaagcgactctgccactttga 32186606  T
Q  125 cagtctagatttaata 140  Q
    ||||||||||||||||    
T  32186607 cagtctagatttaata 32186622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 17577042 - 17576904
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||| ||||||||| |  |  |||| |||||||||||| |||| |||||||| |||||| || ||  ||| |||||     
T  17577042 ctgacggagctttgaaaaaggaaagtgaatagacaggaagcgcagtcaagacagatttgagcagaatcaagcgactaccaaaggaaaggtacctactatg 17576943  T
Q  116 ccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    |||||| |||| |||||| || ||||| || ||||||||    
T  17576942 ccaaccagacaatctagactttatacgtttaacaatagg 17576904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 17605659 - 17605521
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| ||||||| |||||||| ||||||||||| |  |  |||| ||||||||||||||| | ||| ||||||||||| || ||  ||| | |||     
T  17605659 ctgatggagctttgaaaaaggaaagcgcatagacaggaagcgcagtcaagacagatttgagaagtatcaaacgaccaccaaaggaaaggtacctattatg 17605560  T
Q  116 ccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    |||||  |||| |||||| || |||||||| ||||||||    
T  17605559 ccaactagacaatctagactttatacgattaacaatagg 17605521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 19350759 - 19350869
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||||||||||||| |||||||||| |  ||  |||| ||||| || ||||||||||| ||||| || ||||||||||| ||||| |     
T  19350759 ctgacggagctttgaagaaggaaagtacatagacaggaagcgaactcagtacagacttaagaagaaccaaacgacccccgaaagatagaaaacgactttg 19350858  T
Q  116 ccaacccgaca 126  Q
    ||| |||||||    
T  19350859 ccaccccgaca 19350869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 12608295 - 12608371
Alignment:
Q  56 agaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacagtctag 132  Q
    ||||| ||||||||| || |||||||||| |||||||||||||||||| |||  | |||||||| ||| ||||||||    
T  12608295 agaggacaggacagacttcagaagaaccaggcgaccaccaaaagataggaacttattattccaagccgccagtctag 12608371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 12673442 - 12673318
Alignment:
Q  18 gatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattcc 117  Q
    |||||| | |||||||||||||| ||||||||||||| ||  ||||||||| |  | ||||| | |||||||||||| || || | |||| |||| | ||    
T  12673442 gatggatcgttgaagaaggaaagagcatagacaggcagagcagtcaggacatacattagaaggatcaagcgaccaccgaaggaaaaaaactgactttgcc 12673343  T
Q  118 aacccgacagtctagatttaatacg 142  Q
    |||| | |||||||||||| |||||    
T  12673342 aaccagccagtctagattttatacg 12673318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 25351038 - 25351161
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||||||||||||||| ||||||||||| |  ||||||| |||| | || | ||| ||||| ||||||||| | |||||||| ||||| |     
T  25351038 ctgacggagctttgaagaaggaaagagcatagacaggaagcgaggtcaagacaaactttaaaaggaccaaccgaccaccataggatagaaagcgactctg 25351137  T
Q  116 ccaacccgacagtctagatttaat 139  Q
    ||| ||||||| ||| || |||||    
T  25351138 ccaccccgacaatctggacttaat 25351161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 15956233 - 15956159
Alignment:
Q  84 aagcgaccaccaaaagatagaaaccgactattccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    ||||||||||||||||| || |||||||||| |||||| |||| | ||| |||||| ||||| |||| |||||||    
T  15956233 aagcgaccaccaaaagaaaggaaccgactatgccaaccagacaatatagttttaattcgattaacaacaggttcc 15956159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 13563255 - 13563186
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaa 85  Q
    |||| ||| ||||||| |||||||| ||||||||||||| |||||| |||||| |||||| || ||||||    
T  13563255 ctgacggagctttgaaaaaggaaagagcatagacaggcagagaggttaggacaaatttgataaaaaccaa 13563186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 19616184 - 19616120
Alignment:
Q  36 gaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaaga 100  Q
    ||||| ||||||||||||| ||||| || ||||||||| || || | ||||||||||||||||||    
T  19616184 gaaagggcatagacaggcagagaggacatgacagatttaaggaggatcaagcgaccaccaaaaga 19616120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 1104269 - 1104182
Alignment:
Q  19 atggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||| |||||||||||||||| |||||||||| || ||| ||||| ||| | ||  |||  | |||||||||||||||||| |||||    
T  1104269 atggagctttgaagaaggaaagagcatagacagacagagaagtcagtacaaacttaggaacgatcaagcgaccaccaaaagaaagaaa 1104182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 133
Target Start/End: Original strand, 22522040 - 22522083
Alignment:
Q  90 ccaccaaaagatagaaaccgactattccaacccgacagtctaga 133  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||    
T  22522040 ccaccaaaagatagaaatcgacttttccaacccgacaatctaga 22522083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 284; Significance: 1e-159; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 16 - 335
Target Start/End: Original strand, 13551397 - 13551716
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13551397 ctgatggagctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 13551496  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13551497 ccaacctgacagtctagatttaatacgattcacaataggttcccagaaacacaatcttcgaggattaccaccaataggcatacccagatacaagaaagga 13551596  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttca 315  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13551597 acgttacctactttacaactcaacacggaagcagcctcatgtaaccaagacgacgcaatattcaccccaacaagcatactcttatgaaaattcactttca 13551696  T
Q  316 aacccgacatagcctcgaac 335  Q
    | ||||||||||||||||||    
T  13551697 accccgacatagcctcgaac 13551716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 325
Target Start/End: Complemental strand, 25380719 - 25380409
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaa-gatagaaaccgactat 114  Q
    |||||||| |||||||||| ||||||||||||| ||||| | | |||| |||||||||||||||||||||||| || |||||| || ||||| ||||||     
T  25380719 ctgatggagctttgaagaaagaaagtgcatagagaggcagataagtcaagacagatttgagaagaaccaagcggccgccaaaaagagagaaaacgactaa 25380620  T
Q  115 tccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagg 214  Q
    ||||||  |||||||||||||||||||||||||||||||||||| | |||| |||||| |||  |||||| |||||||| | |||||  |||||||||||    
T  25380619 tccaacttgacagtctagatttaatacgattcacaataggttcccaaaaacacaatctccgaatattacctccaataggtagacccatatacaagaaagg 25380520  T
Q  215 aacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttc 314  Q
     || || || ||||||||||| |||||  |  ||  ||| | ||||||||| |  ||||| || || | |||||||||||||||||||||||| || |||    
T  25380519 cacttttcccactttacaactcaacacgaacacaatctcgtttaaccaagaggtggcaatgttaacaccaacaagcatactcttatgaaaatttaccttc 25380420  T
Q  315 aaacccgacat 325  Q
    || | ||||||    
T  25380419 aatctcgacat 25380409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 20 - 240
Target Start/End: Complemental strand, 28399871 - 28399651
Alignment:
Q  20 tggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaa 119  Q
    |||| |||||||||| ||||| ||||||||||||| ||| ||||| || ||||| || |||| ||| || ||||||||||| ||||||| ||||| ||||    
T  28399871 tggagctttgaagaaagaaagagcatagacaggcagagatgtcagaactgattttaggagaatcaaacgtccaccaaaagagagaaacctactatgccaa 28399772  T
Q  120 cccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgt 219  Q
    |||||||||||||||||||| ||||| || || |||||| | ||  | | ||| || ||||||||||| |||||||  || |||||||| |||||||| |    
T  28399771 cccgacagtctagatttaatgcgatttacgatcggttcccaaaactgaagtctccgcggattaccacctataggcaggcctaggtacaaaaaaggaactt 28399672  T
Q  220 tacctactttacaacttaaca 240  Q
    |||| ||||||||||| ||||    
T  28399671 tacccactttacaactcaaca 28399651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 15018492 - 15018709
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||||||||||||||||||||||||||||  ||| |||| ||||| |||||||| ||||||||  ||||||||||| || || ||||||||    
T  15018492 ctgacggagctttgaagaaggaaagtgcatagacaggccgagaagtcaagacagctttgagaacaaccaagcagccaccaaaagagaggaaacgactatt 15018591  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    ||||||||||| || || ||||| |||||||||||| || ||| || ||| ||| |  ||||||||||| ||||| | || ||||| ||| ||||||||     
T  15018592 ccaacccgacaatcgagctttaacacgattcacaattggatcccagcaacacaaacgacgaggattacccccaatcgacaaacccaagtataagaaaggc 15018691  T
Q  216 acgttacctactttacaa 233  Q
    || ||||| | |||||||    
T  15018692 accttacccattttacaa 15018709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 8065586 - 8065444
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||||  |||||||||| |||||| ||||| || ||||||||||  | ||| || ||||| ||||| ||||| |  |||||    
T  8065586 ctgatggagctttgaagaaggaaaaagcatagacagacaaagaagtcagaactgatttgagaatgatcaaacggccaccgaaagagagaaatctgctatt 8065487  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    ||||||||||| ||||||||||||||||||||| || ||||||    
T  8065486 ccaacccgacaatctagatttaatacgattcacgattggttcc 8065444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 35488653 - 35488795
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||| ||||||||||  ||||||||||||||||||||||| || ||||||||||| | |||||| ||||| ||||| ||||| |   ||||    
T  35488653 ctgaaggagctttaaagaaggaaaaagcatagacaggcaaagaggtcagaactgatttgagaaggatcaagcggccaccgaaagagagaaatctgttatt 35488752  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    ||| ||||||| ||||||||||||||||||||| || ||||||    
T  35488753 ccatcccgacaatctagatttaatacgattcacgattggttcc 35488795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 11233814 - 11233680
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||| ||||||||||| ||||| ||||||||||| ||||| || | ||| | ||| |||||||||||||| || || ||||||||  ||||    
T  11233814 ctgatggagctttaaagaaggaaagagcataaacaggcaaagaagtcagaactgctttcaaaaggaccaagcgaccaccgaacgagagaaaccggttatt 11233715  T
Q  116 ccaacccgacagtctagatttaatacgattcacaa 150  Q
    |||||| ||||||||||||||||| | ||||||||    
T  11233714 ccaacctgacagtctagatttaattctattcacaa 11233680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 45422335 - 45422473
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||| ||||| ||||||||||| | ||| |||| ||||||||| |  |||||||| || || ||||| || |||||||| |||||    
T  45422335 ctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaatagaaccaaacgtcctccaaaggaaagaaaccggctatt 45422434  T
Q  116 ccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    |||||||   ||||||| |||||||||||||||||||||    
T  45422435 ccaacccataagtctagctttaatacgattcacaatagg 45422473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 28253551 - 28253684
Alignment:
Q  23 aactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaaccc 122  Q
    ||||||||| |||||||||||||||||| | | ||  |||||||| || |||||||| |  | ||||||||||||||| ||||||||||||   |||||     
T  28253551 aactttgaaaaaggaaagtgcatagacatgaagagcagtcaggacggacttgagaaggattaggcgaccaccaaaagagagaaaccgactacgacaacca 28253650  T
Q  123 gacagtctagatttaatacgattcacaataggtt 156  Q
    ||||||||||||||||| ||||| |||| |||||    
T  28253651 gacagtctagatttaattcgattaacaacaggtt 28253684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 33515518 - 33515389
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||||||||||||| |  |  |||||||| |||||| |||||| ||  |||| ||||||||| || ||||||||||     
T  33515518 ctgacggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacggatttgcgaagaatcagacgactaccaaaagaaaggaaccgactatg 33515419  T
Q  116 ccaacccgacagtctagatttaatacgatt 145  Q
    |||||| |||| ||||||||| ||||||||    
T  33515418 ccaaccagacaatctagattttatacgatt 33515389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 255
Target Start/End: Complemental strand, 9668331 - 9668092
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||| |||||||| || |||||||||| ||| || ||||| || | ||| | ||| |||||||||||||| || || ||||||||  ||||    
T  9668331 ctgatggagctttaaagaaggacagagcatagacagacaacgaagtcagaactgctttcaaaaggaccaagcgaccaccgaacgagagaaaccggttatt 9668232  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaa-tcttcgaggattaccaccaataggcatacccaggtacaagaaagg 214  Q
    |||||| |||| |||||||||||| | |||||||| ||| ||| | ||||| ||  |  || |||||||| || ||||| | ||| || |||| ||||||    
T  9668231 ccaacctgacaatctagatttaattctattcacaacagggtccca-aaacgaaagacgacgcggattaccccctataggtaaaccaagatacatgaaagg 9668133  T
Q  215 aacgttacctactttacaacttaacacagaagcagcctcat 255  Q
    ||  || || |||||||| |||||||| ||||| |||||||    
T  9668132 aatcttgcccactttacatcttaacaccgaagccgcctcat 9668092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 150
Target Start/End: Original strand, 12646374 - 12646499
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||| |||||||| ||||||||||| |  |  || ||||| |||||||||||||  | |||||||||||| || || |||||||||| |||||  ||    
T  12646374 ctttgaaaaaggaaagagcatagacaggaagcgcagttaggacggatttgagaagaattaggcgaccaccaaaggagaggaaccgactatgccaacttga 12646473  T
Q  125 cagtctagatttaatacgattcacaa 150  Q
    || |||||||||||||||||| ||||    
T  12646474 caatctagatttaatacgattaacaa 12646499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 22724755 - 22724654
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||| ||||||||||| |||||||||| || |||||||| ||| ||||| ||||||||||| |  ||||||||||| || || | |||||||||||||||    
T  22724755 ctttaaagaaggaaagagcatagacagacagagaggtcatgactgatttaagaagaaccaatcagccaccaaaagagaggaaacaactattccaacccga 22724656  T
Q  125 ca 126  Q
    ||    
T  22724655 ca 22724654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 6824235 - 6824348
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||||||||||||||||||||||||  ||| ||||||||||||||| |||||||| || || || || ||||||| ||| ||| | | ||| ||||     
T  6824235 ctttgaagaaggaaagtgcatagacagg--aagcggtcaggacagatttaagaagaactaaacggcctccgaaagataaaaagcgaatttgccaccccgt 6824332  T
Q  125 cagtctagatttaata 140  Q
     |||||||| ||||||    
T  6824333 tagtctagacttaata 6824348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 22724560 - 22724508
Alignment:
Q  279 accctaacaagcatactcttatgaaaattcactttcaaacccgacatagcctc 331  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  22724560 accccaacaagaatactcttatgaaaattcactttcaaacccgacatatcctc 22724508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 26147041 - 26147129
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||||||||| ||||||||||| | |||||||| |||||| || |||||||| || |  |||||||| |||| ||||||||||||    
T  26147041 ttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttagaagaactaacctgccaccaaacgataaaaaccgactatt 26147129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 158
Target Start/End: Complemental strand, 10289382 - 10289249
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||| ||||||||||| |  ||||||||||| || || || ||||| |  |||||||||||||| |||   |  || |||||||| ||    
T  10289382 ctttgaagaaggaaagagcatagacaggaagcgaggtcaggaccgacttcaggagaacaagacgaccaccaaaagaaagatgtctgcttttccaaccgga 10289283  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    ||| | |||||||||||| || |||| |||||||    
T  10289282 caggcgagatttaatacggttgacaacaggttcc 10289249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 33583753 - 33583629
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||| ||||||||||| |  |||||||||||| | ||||||| ||| || || || ||  | |||||||| ||||| |     
T  33583753 ctgacggagctttgaaaaaggaaagagcatagacaggaagcgaggtcaggacaaacttgagaaaaacgaaccggcccccggatgatagaaatcgactttg 33583654  T
Q  116 ccaacccgacagtctagatttaata 140  Q
    ||| ||||||| |||||||||||||    
T  33583653 ccaccccgacaatctagatttaata 33583629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 2207136 - 2207021
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| |  | || || ||| || || | ||||| ||| ||||| ||||| || ||||||||||| | |||||  ||||    
T  2207136 ttgaagaaggaaagagcatagacaggtagcgcggacaagacggactttacaagaatcaaacgacctccaaaggaaagaaaccgactttgccaactggaca 2207037  T
Q  127 gtctagatttaatacg 142  Q
    ||||||||||||||||    
T  2207036 gtctagatttaatacg 2207021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 142
Target Start/End: Original strand, 13416512 - 13416627
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||| | |  | ||||| || ||| || ||||||| ||||||||| ||||| || ||||||||||| | ||||   ||||    
T  13416512 ttgaagaaggaaagagcatagacatgtagcgcggtcaagatagactttagaagaatcaagcgacctccaaatgaaagaaaccgactttgccaattagaca 13416611  T
Q  127 gtctagatttaatacg 142  Q
    |||||||||| |||||    
T  13416612 gtctagattttatacg 13416627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 34357634 - 34357729
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaaccc 122  Q
    |||||||||||||| ||||||||||| ||| ||||||  | ||| ||||||||||  || |||||||||||||| | |||| |||| ||| |||||    
T  34357634 ttgaagaaggaaagagcatagacaggtaaaaaggtcaaaagagacttgagaagaattaaacgaccaccaaaagacaaaaactgacttttcaaaccc 34357729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 10689364 - 10689452
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||||||||| ||||||||||| | |||||||| |||| | || |||||||| ||  | || ||||| |||| ||||||||||||    
T  10689364 ttgaagaaggaaagagcatagacaggtagagaggtcaagacatactttagaagaactaactggccgccaaacgataaaaaccgactatt 10689452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 20946914 - 20946828
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagata 102  Q
    |||| ||| ||||||| || ||||| ||||| |||||||| || | |||||||||||| || | |||||||||||| || |||||||    
T  20946914 ctgacggagctttgaaaaaagaaagggcataaacaggcaacgacgacaggacagatttcagtaaaaccaagcgacccccgaaagata 20946828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 2282606 - 2282683
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagata 102  Q
    |||||||||||||||| ||||| ||||| | |||||||| |||||| || |||| |||||   | |||||||||||||    
T  2282606 ctttgaagaaggaaagggcatacacaggaagagaggtcatgacagacttaagaataaccagatgcccaccaaaagata 2282683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 4222256 - 4222175
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    |||||||||||||||| ||||||||| | |  |||| || |||||| |||||||||||||  ||||| ||||| || |||||    
T  4222256 ctttgaagaaggaaagagcatagacaagaatggaggacatgacagacttgagaagaaccagacgacccccaaatgaaagaaa 4222175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 32191871 - 32192000
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||||||||| || || |||| | |||| || || ||||  ||| |||| || |||| ||| | |||||||||||| ||||| | ||| ||    
T  32191871 ctgaaggagctttgaagaaagagagagcatggccaggtaacgaagtcaatacaaatttaaggagaatcaaacaaccaccaaaagaaagaaagcaactctt 32191970  T
Q  116 ccaacccgacagtctagatttaatacgatt 145  Q
    |||||| |||| |||||||||||| |||||    
T  32191971 ccaaccagacaatctagatttaatgcgatt 32192000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 44028537 - 44028412
Alignment:
Q  17 tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattc 116  Q
    ||||||| | |||||||||||||| ||||||||||  | || ||||| |||||| || || ||||  || ||  |||| || || ||||||||||| | |    
T  44028537 tgatggagccttgaagaaggaaagagcatagacagatagagcggtcaagacagactttaggagaattaaacggtcaccgaaggagagaaaccgactttgc 44028438  T
Q  117 caacccgacagtctagatttaatacg 142  Q
    ||| | |||||||||||||| |||||    
T  44028437 caatcagacagtctagattttatacg 44028412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 43311085 - 43311173
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||||||||| ||||||||||| | |||| | |  ||||| || |||||||| || |  |||||||| |||| ||||||||||||    
T  43311085 ttgaagaaggaaagagcatagacaggtagagagataaaaacagactttagaagaactaacctgccaccaaacgataaaaaccgactatt 43311173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 20 - 335
Target Start/End: Original strand, 20675854 - 20676169
Alignment:
Q  20 tggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaa 119  Q
    |||| |||||||||| ||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||| | |||||||||||| |||    
T  20675854 tggagctttgaagaatgaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagaaaaaccgactattacaa 20675953  T
Q  120 cccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||| | ||      
T  20675954 cccgacagtctagatttaatacgattcacaataggttcctagaaacacaatcttcgagggttaccaccaataggcatacctaggtacaagaaatggacac 20676053  T
Q  220 tacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttcaaacc 319  Q
    | |||||||||||||| ||||| |||||||| |||| ||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||    
T  20676054 ttcctactttacaactcaacacggaagcagcttcatttaaccaagacgacccaatattcacccccacaagcatactcttatgaaaattcactttcaaacc 20676153  T
Q  320 cgacatagcctcgaac 335  Q
    ||||||||||| ||||    
T  20676154 cgacatagccttgaac 20676169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 20 - 335
Target Start/End: Original strand, 55299440 - 55299755
Alignment:
Q  20 tggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaa 119  Q
    |||| |||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  55299440 tggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaaaccgactattccaa 55299539  T
Q  120 cccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgt 219  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||| | |||||||||||||| ||      
T  55299540 cccgacaatctagatttaatacgattcacaataggttcccagaaacacaatcttcgagggttaccaccaataggcatatctaggtacaagaaagggacaa 55299639  T
Q  220 tacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttcaaacc 319  Q
    | || ||||||||||| ||||| || |||||||||| |||||| |||||| ||||||||||||  || ||||||||||||||||||||||||||||||||    
T  55299640 ttccaactttacaactcaacacggatgcagcctcatataaccaggacgacccaatattcacccccaccagcatactcttatgaaaattcactttcaaacc 55299739  T
Q  320 cgacatagcctcgaac 335  Q
    ||||||||||||||||    
T  55299740 cgacatagcctcgaac 55299755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 20 - 323
Target Start/End: Complemental strand, 23872798 - 23872495
Alignment:
Q  20 tggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaa 119  Q
    |||| |||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  23872798 tggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaaaccgactattccaa 23872699  T
Q  120 cccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgt 219  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||| |||||||||||||| ||      
T  23872698 cccgacagtctagatttaatacgattcacaataggttcccagaaacacaatcttcgagggttaccaccaataggcatacctaggtacaagaaagggacag 23872599  T
Q  220 tacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttcaaacc 319  Q
    | || ||||||||||| ||||| || ||||| |||| |||||| |||||| ||||||||||||  || ||||||||||||||||||||||||||||||||    
T  23872598 ttccaactttacaactcaacacggatgcagcttcatataaccaggacgacccaatattcacccccaccagcatactcttatgaaaattcactttcaaacc 23872499  T
Q  320 cgac 323  Q
    ||||    
T  23872498 cgac 23872495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 16 - 331
Target Start/End: Complemental strand, 29553126 - 29552811
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||||||||||||||| ||||||||||||| ||| |||| ||||| ||||||||||||||| |||||||||||||| || || | ||||||    
T  29553126 ctgacggagctttgaagaaggaaagagcatagacaggcagagaagtcaagacagctttgagaagaaccaaacgaccaccaaaagaaaggaaacaactatt 29553027  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    ||||||||||||||||| | ||||||||||||||||||| ||| | |||| |||||| |||||||| ||||||||||||||||||| ||| | ||||||     
T  29553026 ccaacccgacagtctagttctaatacgattcacaataggatcccaaaaacacaatctccgaggatttccaccaataggcatacccaagtataggaaaggc 29552927  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttca 315  Q
    || | ||| ||||||||| ||||||| |||||  |||||  |||||| || |  | ||| || ||||  | |||||||||||||||||||||||||||||    
T  29552926 acttgacccactttacaatttaacacggaagcgacctcaactaaccaggaaggggtaatgttaaccccgataagcatactcttatgaaaattcactttca 29552827  T
Q  316 aacccgacatagcctc 331  Q
    |||| ||||| |||||    
T  29552826 aacctgacattgcctc 29552811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 331
Target Start/End: Original strand, 19648510 - 19648825
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||||||||| ||||| ||||||||||| | ||||||||  |||||||||||||||||||| || ||| ||||||| || || ||||||||    
T  19648510 ctgacggagctttgaagaaagaaagagcatagacaggtagagaggtcaacacagatttgagaagaaccaaacggccagcaaaagagaggaaacgactatt 19648609  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| |||| ||||||||| ||||||||||||| ||| ||| |||||| ||| |  ||||||||||||||||| ||||| |||| ||| ||||||||     
T  19648610 ccaacctgacactctagattttatacgattcacaacagggtcccagaaacacaaacgacgaggattaccaccaatcggcatgcccaagtataagaaaggc 19648709  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttca 315  Q
    || || || ||||||||| ||| |||||| |||||||||  ||||||||| || ||||| || |||| ||| ||   |||||| | |||||| |||||||    
T  19648710 acctttcccactttacaatttagcacagacgcagcctcaaataaccaagaagaagcaatgttaaccccaaccagtgaactcttgttaaaattaactttca 19648809  T
Q  316 aacccgacatagcctc 331  Q
    |||| |||| ||||||    
T  19648810 aaccagacaaagcctc 19648825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 254
Target Start/End: Original strand, 8935889 - 8936127
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||||||||||||||| |||||||||| || ||||||||  |||||||||||||||||||| || | ||||||||| || || ||||||||    
T  8935889 ctgacggagctttgaagaaggaaagagcatagacagacagagaggtcaacacagatttgagaagaaccaaacggcaaccaaaagagaggaaacgactatt 8935988  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| |||||||||| ||| ||||||||||||| ||| ||| |||||| ||| | ||||||||| |||||||| |||||||||| ||| ||||||||     
T  8935989 ccaacctgacagtctagtttttatacgattcacaacagggtcccagaaacacaaacgtcgaggattcccaccaatcggcatacccaagtataagaaaggc 8936088  T
Q  216 acgttacctactttacaacttaacacagaagcagcctca 254  Q
    || || || ||||||||| ||| |||||| |||||||||    
T  8936089 acctttcccactttacaatttagcacagacgcagcctca 8936127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 19115251 - 19115468
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||||||||||||||||||||||| || ||| |||| ||||| |||||||||||||||||| ||||||||||| || || ||||||||    
T  19115251 ctgacggagctttgaagaaggaaagtgcatagacagacagagaagtcaagacagctttgagaagaaccaagcggccaccaaaagagaggaaacgactatt 19115350  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||||||||||| || ||||| ||||||||||||||| ||| |||||| ||| |  ||||||||||| ||||| |||| ||||| ||| ||||| ||     
T  19115351 ccaacccgacagtcgagctttaacacgattcacaataggatcccagaaacacaaacgacgaggattacccccaatcggcaaacccaagtataagaatggc 19115450  T
Q  216 acgttacctactttacaa 233  Q
    || ||||| |||||||||    
T  19115451 accttacccactttacaa 19115468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 331
Target Start/End: Original strand, 34976756 - 34977071
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||| || | ||||||||| || || |||||||||| |||  |||||||    
T  34976756 ctgatggagctttgaagaaggaaagcgcataaacaggcagagaggtcaggacagactttaaaagaaccaaacggccgccaaaagataaaaaatgactatt 34976855  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| ||||  |||| ||| || ||| |||||||||||||| | |||| |||||  |||| ||| |  |||||||||||||||| |||||| ||  |     
T  34976856 ccaaccagacaacctagcttttatgcgactcacaataggttcccaaaaactcaatcgccgagaatttctcccaataggcatacccaagtacaaaaacagc 34976955  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttca 315  Q
    || ||||| ||||| || ||||| | ||| ||  |||||| ||||||||| |  || ||| |||| | ||| |  |||||||||||||||||||| ||||    
T  34976956 accttacccactttgcagcttaaaatagacgccacctcatttaaccaagatggggcgatactcacaccaaccaatatactcttatgaaaattcaccttca 34977055  T
Q  316 aacccgacatagcctc 331  Q
    |||| |||||||||||    
T  34977056 aaccggacatagcctc 34977071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 16 - 330
Target Start/End: Complemental strand, 10562649 - 10562335
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||||| |||||||||| || ||||||||| ||||| || | |||||||| |||||| | |||||||| |||  |||||||    
T  10562649 ctgatggagctttgaagaaggaaagcgcatagacagacagagaggtcagaacagactttaaaagaaccaggcgaccgctaaaagataaaaaatgactatt 10562550  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| ||||  || | |||||| |||||||||| ||||||| |||||| |||||  |||| ||| || || ||||||||||||| |||||  || ||     
T  10562549 ccaaccagacaaccttgctttaatgcgattcacaaaaggttcccagaaactcaatcgccgagaatttcccccgataggcatacccaagtacacaaacggc 10562450  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaacaagcatactcttatgaaaattcactttc 314  Q
    || || || ||||| ||||| || ||||| |  ||||||  ||||||||| |  || |||||||| || | ||||| ||||||||||||||||||| |||    
T  10562449 accttgcccactttgcaactcaaaacagacgttgcctcacttaaccaagaaggagcgatattcacaccaaccaagc-tactcttatgaaaattcaccttc 10562351  T
Q  315 aaacccgacatagcct 330  Q
    || |||||||| ||||    
T  10562350 aatcccgacatggcct 10562335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 238
Target Start/End: Original strand, 26694747 - 26694965
Alignment:
Q  20 tggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaa 119  Q
    |||| |||||||||| ||||| ||||||||||||| ||| ||||| || |||||||| |||| |||||| ||||||||||| ||||| | ||||||||||    
T  26694747 tggagctttgaagaaagaaagggcatagacaggcagagatgtcagaactgatttgaggagaatcaagcggccaccaaaagagagaaatctactattccaa 26694846  T
Q  120 cccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgt 219  Q
    |||| ||||||||||||||| |||||||| || |||||| | ||  | | ||| || ||||||||||| |||||||  || |||||||| |||||||       
T  26694847 cccgtcagtctagatttaatgcgattcacgatcggttcccaaaactgaagtctccgcggattaccacctataggcaggcctaggtacaaaaaaggaattc 26694946  T
Q  220 tacctactttacaacttaa 238  Q
    |||| |||||||| |||||    
T  26694947 tacccactttacagcttaa 26694965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 331
Target Start/End: Original strand, 42779065 - 42779380
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||||| |||||||||| || ||||||||  ||||| || |  | |||||  || || |||||||||||||| ||||||||    
T  42779065 ctgatggagctttgaagaaggaaagcgcatagacagacagagaggtcaaaacagacttcaacaaaaccagacggccgccaaaagatagaaaacgactatt 42779164  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    ||| || ||||  |||| |||||| |||||||||| ||||||| | |||| ||| |   ||| ||| || ||||||||||| |||| |||||| || ||     
T  42779165 ccacccagacaacctagctttaatgcgattcacaaaaggttcccaaaaactcaaacgcagagaatttcccccaataggcatgcccaagtacaaaaacggc 42779264  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttca 315  Q
    || ||||| ||||| || ||||| ||||| || ||||||  ||||||||| |  || |||||||| | ||| |   ||||||||||||||||||| ||||    
T  42779265 accttacccactttgcagcttaaaacagacgccgcctcacttaaccaagagggagcgatattcacaccaaccaaactactcttatgaaaattcaccttca 42779364  T
Q  316 aacccgacatagcctc 331  Q
    |||| ||||| |||||    
T  42779365 aaccagacatggcctc 42779380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 158
Target Start/End: Complemental strand, 23641907 - 23641774
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| || ||||||| ||| |||||||| |||||||| |||||||| | |||||| ||    
T  23641907 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgactttgccaaccaga 23641808  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  23641807 caatctagatttaatacgatccaccacaggttcc 23641774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 1827865 - 1827723
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||||||||||||| | ||  |||||||| || || ||||||| ||| || ||||| ||||| || |||||||| |     
T  1827865 ctgacggagctttgaaaaaggaaagtgcatagacaggaagagcagtcaggacggactttagaagaatcaaacggccaccgaaagagaggaaccgactttg 1827766  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||| |||| |||||||||||||||||||||||||||||||    
T  1827765 ccaaccagacaatctagatttaatacgattcacaataggttcc 1827723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 254
Target Start/End: Complemental strand, 7662633 - 7662395
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||| ||||| ||||||||||| | ||| |||| ||||||||| |  |||||||| || || ||||| || |||||||| |||||    
T  7662633 ctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctccaaaggaaagaaaccggctatt 7662534  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||||   ||||||| |||||| |||||||||||||| ||| | ||||  |  |  || |||||||| ||||||||||  |||| |||||  ||||||    
T  7662533 ccaacccataagtctagctttaattcgattcacaataggatcccaaaaactaagacgacgcggattacccccaataggcaagcccaagtacataaaagga 7662434  T
Q  216 acgttacctactttacaacttaacacagaagcagcctca 254  Q
    || ||||| |||||||| || | ||| ||||| ||||||    
T  7662433 accttacccactttacagctcagcactgaagctgcctca 7662395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 25 - 158
Target Start/End: Complemental strand, 23647565 - 23647432
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| || ||||||| |||  ||||||| |||||||| |||||||| | |||||| ||    
T  23647565 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaatgaccaccgaaagataggaaccgactttgccaaccaga 23647466  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  23647465 caatctagatttaatacgatccaccacaggttcc 23647432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 16 - 247
Target Start/End: Complemental strand, 42952856 - 42952625
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||| ||||||||||| ||||||||||||||||| ||||| || | ||| |  || || ||||||||||| || |||| |||||| |||||    
T  42952856 ctgatggagctttaaagaaggaaagagcatagacaggcaaagaagtcagaactgctttcaagaggactaagcgaccaccgaacgataaaaaccggctatt 42952757  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacg-caatcttcgaggattaccaccaataggcatacccaggtacaagaaagg 214  Q
    |||||| |||||||||||||||||   |||||||| ||| ||| | ||||| ||| |  || |||||||| | |||||| | ||| ||||||| ||||||    
T  42952756 ccaacctgacagtctagatttaattttattcacaaaagggtccca-aaacgacaaacgacgtggattacccctaataggaagaccaaggtacatgaaagg 42952658  T
Q  215 aacgttacctactttacaacttaacacagaagc 247  Q
    ||  || ||  |||||||||| ||||| |||||    
T  42952657 aatcttgccccctttacaactcaacactgaagc 42952625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 47419628 - 47419761
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||||||||| |||||||||||||| | ||  |||||||| || || || |||| ||| |||||||| |||||||| |||||||| | |||||| ||    
T  47419628 ctttgaagaaggagagtgcatagacagggagagcagtcaggaccgactttagtagaatcaaacgaccaccgaaagataggaaccgactttgccaaccaga 47419727  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  47419728 caatctagatttaatacgatccaccacaggttcc 47419761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 19756092 - 19756224
Alignment:
Q  26 tttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgac 125  Q
    |||||| |||||||||||||||||||| |  |  |||||||| || || || |||| ||| |||||||| ||||| || |||||||| | |||||| |||    
T  19756092 tttgaaaaaggaaagtgcatagacaggtagcgcagtcaggacggactttagtagaatcaaacgaccaccgaaagaaaggaaccgactttgccaaccagac 19756191  T
Q  126 agtctagatttaatacgattcacaataggttcc 158  Q
    | ||||||||||||||||||||||| |||||||    
T  19756192 aatctagatttaatacgattcacaacaggttcc 19756224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 19783714 - 19783582
Alignment:
Q  26 tttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgac 125  Q
    |||||| |||||||||||||||||||| |  |  |||||||| || || || |||| ||| |||||||| ||||| || |||||||| | |||||| |||    
T  19783714 tttgaaaaaggaaagtgcatagacaggtagcgcagtcaggacggactttagtagaatcaaacgaccaccgaaagaaaggaaccgactttgccaaccagac 19783615  T
Q  126 agtctagatttaatacgattcacaataggttcc 158  Q
    | ||||||||||||||||||||||| |||||||    
T  19783614 aatctagatttaatacgattcacaacaggttcc 19783582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 19733313 - 19733184
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||| ||||||||||| |  |  |||||||||||||||||||| | ||| |||||||||||||| || ||||||||||     
T  19733313 ctgacggagctttgaaaaaggaaagagcatagacaggaagggcagtcaggacagatttgagaaggatcaatcgaccaccaaaagaaaggaaccgactatg 19733214  T
Q  116 ccaacccgacagtctagatttaatacgatt 145  Q
    | ||||  ||| ||||| |||||| |||||    
T  19733213 ctaaccaaacaatctagctttaattcgatt 19733184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 2072355 - 2072478
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||||||||| ||||| ||||||||| ||| |||||||| |||| |||||||||||||||| || || || || || ||||| ||||| |     
T  2072355 ctgacggagctttgaagaaagaaagagcatagacatgcagagaggtcatgacaaatttgagaagaaccaaccggcctccgaaggagagaaaacgactttg 2072454  T
Q  116 ccaacccgacagtctagatttaat 139  Q
    ||| ||||| |||||||| |||||    
T  2072455 ccaccccgatagtctagacttaat 2072478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 2365830 - 2365945
Alignment:
Q  26 tttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgac 125  Q
    |||||| ||||| ||  |||||||||| || || |||| |||||| || || | |||||| |||||||||||||| ||||| ||||| |||||||| |||    
T  2365830 tttgaaaaaggagagaacatagacaggtaaggaagtcaagacagacttaaggataaccaatcgaccaccaaaagacagaaaacgactcttccaaccagac 2365929  T
Q  126 agtctagatttaatac 141  Q
    | ||||||||||||||    
T  2365930 aatctagatttaatac 2365945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 9691244 - 9691361
Alignment:
Q  22 gaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacc 121  Q
    ||||||||||||||||||| ||||| ||||| |  || || |||||||| ||||||||||| || |||||  |||| |||||||| ||||| | ||| ||    
T  9691244 gaactttgaagaaggaaagagcataaacaggaagcgaagtaaggacagacttgagaagaactaaccgaccctcaaaggatagaaaacgactttgccaccc 9691343  T
Q  122 cgacagtctagatttaat 139  Q
    ||| | ||||||||||||    
T  9691344 cgataatctagatttaat 9691361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 40688905 - 40689022
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||| ||||||||||  |  |  |||| |||||| || | ||||| ||||||||| |||||||| ||||||||||| | |||||  ||    
T  40688905 ctttgaagaaggaaagagcatagacagatagcgcagtcaagacagactttaaaagaatcaagcgacctccaaaagaaagaaaccgactttgccaactaga 40689004  T
Q  125 cagtctagatttaatacg 142  Q
    |||||||||||| |||||    
T  40689005 cagtctagattttatacg 40689022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 331
Target Start/End: Original strand, 20396472 - 20396695
Alignment:
Q  108 cgactattccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtaca 207  Q
    |||||||||||||| ||||  |||| ||| || |||||||||||||||||| | |||| ||| |  |||| ||| ||  | ||||||||||| | |||||    
T  20396472 cgactattccaaccagacaacctagcttttatgcgattcacaataggttcccaaaaactcaaacgccgagaatttccctcgataggcatacctaagtaca 20396571  T
Q  208 agaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaac-aagcatactcttatgaaaat 306  Q
    | || || || ||  | ||||| || | ||| ||||| || ||||||  ||||||||| |  || |||||||| | ||| |||| |||||||||||||||    
T  20396572 aaaacggcaccttgtccactttgcatcctaaaacagacgccgcctcacttaaccaagagggagcgatattcacaccaaccaagc-tactcttatgaaaat 20396670  T
Q  307 tcactttcaaacccgacatagcctc 331  Q
    |||| |||||||| |||||||||||    
T  20396671 tcaccttcaaaccggacatagcctc 20396695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 3129301 - 3129194
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    ||||||||  ||||||||| ||||| ||||||||||||| ||| |||| ||||||||| | ||| ||||| ||||| ||||| || ||||| || | |||    
T  3129301 ctgatggagttttgaagaaagaaagggcatagacaggcagagaagtcaagacagattttaaaagtaccaaacgacctccaaaggaaagaaatcggcaatt 3129202  T
Q  116 ccaacccg 123  Q
    ||||||||    
T  3129201 ccaacccg 3129194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 158
Target Start/End: Complemental strand, 11586464 - 11586366
Alignment:
Q  60 gtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    ||||||||| |||| ||||| |  | ||||||||||||||| || |||||||| ||||| |  ||||||||||||||||| ||||| |||| |||||||    
T  11586464 gtcaggacaaattttagaaggattaggcgaccaccaaaagaaaggaaccgactcttccatctagacagtctagatttaattcgattaacaacaggttcc 11586366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 29328095 - 29327989
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    ||||||||||||||  |||||||||| | |||||||| |||| | || |||||||  ||||||| |||||| || || |||||||| ||| |||| ||||    
T  29328095 ttgaagaaggaaagaccatagacaggtagagaggtcaagacaaactttagaagaattaagcgactaccaaacgacaggaaccgacttttcaaacctgaca 29327996  T
Q  127 gtctaga 133  Q
    |||||||    
T  29327995 gtctaga 29327989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 48312909 - 48313043
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||||||||||||| |  |  |||| |||  ||||||||||||  |  |||| ||||||||| || ||||||||||     
T  48312909 ctgacggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcatgacgaatttgagaagaattagacgacgaccaaaagaaaggaaccgactatg 48313008  T
Q  116 ccaacccgacagtctagatttaatacgattcacaa 150  Q
    |||||| |||| ||||| |||||||| ||| ||||    
T  48313009 ccaaccagacaatctagttttaatacaattaacaa 48313043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 145
Target Start/End: Complemental strand, 55724985 - 55724903
Alignment:
Q  63 aggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacagtctagatttaatacgatt 145  Q
    ||||| ||||||||||||| || |||||||||||| || || |||||||||| ||||   |||| ||||||||||||||||||    
T  55724985 aggacggatttgagaagaatcaggcgaccaccaaaggagaggaaccgactatgccaaatagacaatctagatttaatacgatt 55724903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 38296531 - 38296616
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgact 112  Q
    |||||||||||||| ||||||||||| | ||||||||  ||||| |||||||| || || || |||||||| || |||||||||||    
T  38296531 ttgaagaaggaaagagcatagacaggtagagaggtcaaaacagacttgagaaggactaaacggccaccaaatgacagaaaccgact 38296616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 53486253 - 53486144
Alignment:
Q  17 tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattc 116  Q
    ||||||| |||||||||||||||   |||||||||| | ||||||||| ||||| || |  | |||||  || || |||||||||||||| |||||||||    
T  53486253 tgatggagctttgaagaaggaaaacacatagacaggaagagaggtcagaacagactttaacaaaaccagacggccgccaaaagatagaaaacgactattc 53486154  T
Q  117 caacccgaca 126  Q
    ||||| ||||    
T  53486153 caaccagaca 53486144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 254
Target Start/End: Complemental strand, 3129157 - 3129082
Alignment:
Q  179 attaccaccaataggcatacccaggtacaagaaaggaacgttacctactttacaacttaacacagaagcagcctca 254  Q
    |||||| ||||||||||  |||| ||||||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||    
T  3129157 attacccccaataggcaagcccaagtacaagaaaggaaccttacccactttgcaactcaacaccgaagctgcctca 3129082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 19162483 - 19162368
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| |  | ||||| |||| | || | ||||| ||||||||| ||||| || ||||||| ||| | |||||  ||||    
T  19162483 ttgaagaaggaaagagcatagacaggtagcgcggtcaagacatactttaaaagaatcaagcgacctccaaaggaaagaaacctactttgccaactagaca 19162384  T
Q  127 gtctagatttaatacg 142  Q
    |||||||| |||||||    
T  19162383 gtctagatctaatacg 19162368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 29133687 - 29133762
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaaga 100  Q
    |||||||||||||||| ||||||||||  | |||||||| |||||| || |||||||| | ||| |||||||||||    
T  29133687 ctttgaagaaggaaagagcatagacagagagagaggtcaagacagacttaagaagaacaaggcggccaccaaaaga 29133762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 15342644 - 15342714
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccacca 95  Q
    ||||||| |||||||| |||||||||||||| |  | || ||||||||| ||||||||||| |||||||||    
T  15342644 ctttgaaaaaggaaagggcatagacaggcaatgctgacacgacagatttaagaagaaccaaacgaccacca 15342714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 55464206 - 55464122
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaaga 100  Q
    ||||| || |||||||||||||||| ||||||||| ||| ||| ||||  ||||| || ||||| | ||| ||||||||||||||    
T  55464206 ctgattgagctttgaagaaggaaagagcatagacatgcagagaagtcaatacagacttaagaaggatcaaacgaccaccaaaaga 55464122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 293 - 328
Target Start/End: Complemental strand, 23641639 - 23641604
Alignment:
Q  293 actcttatgaaaattcactttcaaacccgacatagc 328  Q
    ||||||||||||||| ||||||||||||||||||||    
T  23641639 actcttatgaaaattaactttcaaacccgacatagc 23641604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 293 - 328
Target Start/End: Complemental strand, 23647297 - 23647262
Alignment:
Q  293 actcttatgaaaattcactttcaaacccgacatagc 328  Q
    ||||||||||||||| ||||||||||||||||||||    
T  23647297 actcttatgaaaattaactttcaaacccgacatagc 23647262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 293 - 328
Target Start/End: Original strand, 47419896 - 47419931
Alignment:
Q  293 actcttatgaaaattcactttcaaacccgacatagc 328  Q
    ||||||||||||||| ||||||||||||||||||||    
T  47419896 actcttatgaaaattaactttcaaacccgacatagc 47419931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 325
Target Start/End: Original strand, 9691441 - 9691547
Alignment:
Q  219 ttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttcaaac 318  Q
    ||||| ||||||||| |||| ||||| |  ||||||| |||||||||   | |||| || || | ||| |||| ||||||||||||||||||||| ||||    
T  9691441 ttacccactttacaatttaaaacagatgacgcctcatttaaccaagaatccccaatgttaactccaaccagcaaactcttatgaaaattcacttttaaac 9691540  T
Q  319 ccgacat 325  Q
    | |||||    
T  9691541 cagacat 9691547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 12079234 - 12079157
Alignment:
Q  21 ggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaa 98  Q
    ||||||||||||||  |||| ||||||||||| |   ||| ||||||| | || |||||||| |||||||||||||||    
T  12079234 ggaactttgaagaataaaagagcatagacagggagcaaggccaggacaaactttagaagaactaagcgaccaccaaaa 12079157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 43516073 - 43516004
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaa 85  Q
    |||||||| | |||||||||||||| ||||||||||| || |  ||||||||||| || ||||| |||||    
T  43516073 ctgatggagccttgaagaaggaaagagcatagacaggtaatgcagtcaggacagactttagaaggaccaa 43516004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 26 - 331
Target Start/End: Complemental strand, 16375418 - 16375113
Alignment:
Q  26 tttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgac 125  Q
    ||||||||||||||||| ||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||  ||    
T  16375418 tttgaagaaggaaagtgtatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaaaccgactattccaacctaac 16375319  T
Q  126 agtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgttaccta 225  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||||||||| |||||||||||||||||||| |||||||||||||| || || ||||    
T  16375318 agtctagatttaatacggttcacaataggttcccagaaacacaatcttcgagggttaccaccaataggcataccaaggtacaagaaagggacatttccta 16375219  T
Q  226 ctttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttcaaacccgacat 325  Q
    |||||||||| ||||| |||||||| || | ||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  16375218 ctttacaactcaacacggaagcagcttcgtttaaccaagacgacccaatattcacccccacaagcatactcttatgaaaattcactttcaaacccgacat 16375119  T
Q  326 agcctc 331  Q
    ||||||    
T  16375118 agcctc 16375113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 16 - 330
Target Start/End: Complemental strand, 4987390 - 4987076
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||||||||| ||||| ||||||||||| | ||||||||  |||||||||||||||||||| || ||||||||||| || || ||||||||    
T  4987390 ctgacggagctttgaagaaagaaagagcatagacaggtagagaggtcaacacagatttgagaagaaccaaacggccaccaaaagaaaggaaacgactatt 4987291  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||| |||||| ||| |  ||||||||||||||||| |||||||||| ||| ||||||||     
T  4987290 ccaacctgacagtctagattttacacgattcacaacagggtcccagaaacacaaacgacgaggattaccaccaatcggcatacccaagtagaagaaaggc 4987191  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttca 315  Q
    || || || ||||||||| ||| |||||| |||||||||  ||||||||| || ||||| || |||| ||| |||| |||||| | |||||| |||||||    
T  4987190 acctttcccactttacaatttagcacagatgcagcctcaaataaccaagaagaagcaatgttaaccccaaccagcaaactcttgttaaaattaactttca 4987091  T
Q  316 aacccgacatagcct 330  Q
    |||| |||| |||||    
T  4987090 aaccagacaaagcct 4987076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 16 - 330
Target Start/End: Original strand, 36157969 - 36158282
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||||| ||||||||||||| |||||||| |||| |||| | |||||||| ||  || | |||||| | ||| || |||||    
T  36157969 ctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcaagacatattttaaaagaacca-gctgcctctaaaagagaaaaaacgtctatt 36158067  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| ||||  |||  ||||||  ||||||||||||| ||| |||||| |||||  ||||||||||| ||||||| ||||||||||||||  |||||     
T  36158068 ccaaccagacatcctaactttaatctgattcacaataggatcccagaaactcaatcgccgaggattacctccaatagacatacccaggtacataaaaggc 36158167  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttca 315  Q
    || || || ||||| |||||||| ||||| || ||| ||| ||||||||| |  | |||||| || | ||| |  || ||||||||||| ||||| ||||    
T  36158168 acattgcccactttgcaacttaaaacagatgccgccccatttaaccaagagggagaaatattgacaccaactaaaatgctcttatgaaagttcaccttca 36158267  T
Q  316 aacccgacatagcct 330  Q
    |||| ||||||||||    
T  36158268 aacctgacatagcct 36158282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 331
Target Start/End: Original strand, 17659657 - 17659971
Alignment:
Q  17 tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattc 116  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||| || |  | |||||  || || ||||||||||  || ||||||||     
T  17659657 tgatggagcttttaagaaggaaagcgcatagacaggcaaagaggtcaggacagactttaacaaaaccagacggcctccaaaagataagaaacgactattt 17659756  T
Q  117 caacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaa 216  Q
    ||||  ||||  |||| ||| ||||||||||||||||| |||||||||| ||| |  |||| ||| || || ||||||||||| | |||||  || || |    
T  17659757 caacaagacaacctagcttttatacgattcacaataggatcctagaaactcaaacgccgagaatttcccccgataggcatacctaagtacataaacggca 17659856  T
Q  217 cgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaacaagcatactcttatgaaaattcactttca 315  Q
    | || || ||||| || | | | ||||| || ||||||  ||||||||| || || |||||||| || | ||||| ||||||||||||||||||| ||||    
T  17659857 ccttgcccactttgcagcctcaaacagacgccgcctcacttaaccaagatgaagcgatattcacacccaccaagc-tactcttatgaaaattcaccttca 17659955  T
Q  316 aacccgacatagcctc 331  Q
    |||| |||||||||||    
T  17659956 aaccagacatagcctc 17659971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 23942903 - 23943044
Alignment:
Q  17 tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattc 116  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||| || ||||||||||| | |||||| ||||| ||||| ||||| |  ||||||    
T  23942903 tgatggagctttgaagaaggaaagagcatagacaggcaaagaagtcagaactgatttgagaaggatcaagcggccaccgaaagagagaaatctgctattc 23943002  T
Q  117 caacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||||||| |||||||||||| |||||||| || ||||||    
T  23943003 caacccgacaatctagatttaattcgattcacgattggttcc 23943044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 7925210 - 7925343
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| || ||||||| ||| |||||||| |||||||| ||||||||   |||||| ||    
T  7925210 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgacttgnccaaccaga 7925309  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  7925310 caatctagatttaatacgatccaccacaggttcc 7925343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 325
Target Start/End: Complemental strand, 45255165 - 45254856
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||| ||||| |||||||||| ||  |||||||| ||||| || | ||||||||  || || ||||||||||  || ||||||||    
T  45255165 ctgatggagctttgaagaatgaaagcgcatagacagacagcgaggtcagaacagactttaaaagaaccagacggccgccaaaagataagaaacgactatt 45255066  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| || |  || | ||||||||||||||  ||||||||| | || | ||| |  |||| ||| || || ||||||||||||| |||||| || |      
T  45255065 ccaaccagataaccttgctttaatacgattcaagataggttcccaaaagctcaaacgccgagaatttcccccgataggcatacccaagtacaaaaacgac 45254966  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaacaagcatactcttatgaaaattcactttc 314  Q
    || || || ||||| |||||||| ||||| || ||||||  ||||||||| || || |||||||| || | ||||| ||||||||||||||||||| ||     
T  45254965 accttgcccactttgcaacttaaaacagacgccgcctcacttaaccaagaagaagcgatattcacaccaaccaagc-tactcttatgaaaattcacctta 45254867  T
Q  315 aaacccgacat 325  Q
    ||||| |||||    
T  45254866 aaacctgacat 45254856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 7453167 - 7453305
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||| ||||||||||||||||| | ||| |||| ||||||||| | ||||||||  || || ||||| || |||||||| |||||    
T  7453167 ctgatggagctttgaagaaagaaagtgcatagacaggtagagaagtcaagacagattttaaaagaaccagacgtcctccaaaggaaagaaaccggctatt 7453266  T
Q  116 ccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    ||||||||  ||||||| |||||  ||||||||||||||    
T  7453267 ccaacccgtaagtctagctttaactcgattcacaatagg 7453305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 43611516 - 43611337
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    ||||| |||||||||||||  |||  ||||||||||| | ||| ||||| || | ||| ||||| | |||||| ||||| |||||||||||||  |||||    
T  43611516 ctgatagaactttgaagaataaaaaggcatagacaggaagagaagtcagaactgctttaagaaggatcaagcggccaccgaaagatagaaacctgctatt 43611417  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacg-caatcttcgaggattaccaccaataggca 195  Q
    ||||||||| ||||||||||||||  ||||||||||||| ||| | |||||  | |||| | |||||||||||||||||||    
T  43611416 ccaacccgatagtctagatttaatgtgattcacaatagggtccca-aaacgatattctttgcggattaccaccaataggca 43611337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 6901755 - 6901885
Alignment:
Q  19 atggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccacc-aaaagatagaaaccgactattcc 117  Q
    ||||| |||||||||||||||| ||||||||| ||| ||| ||||| |  ||||| || || | |||| | ||||| |||||| |||||||| |||||||    
T  6901755 atggagctttgaagaaggaaagggcatagacatgcagagaagtcagaatcgatttaaggaggatcaagtggccaccgaaaagagagaaaccggctattcc 6901854  T
Q  118 aacccgacagtctagatttaatacgattcac 148  Q
    ||||||||| |||||||||||||||||||||    
T  6901855 aacccgacaatctagatttaatacgattcac 6901885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 41664693 - 41664551
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| ||||||||||| ||||||||   ||  |||||||| || || || |||| ||| |||||||| |||||||| |||||||| |     
T  41664693 ctgacggagctttgaaaaaggaaagtgcgtagacaggtggagcagtcaggacggactttagtagaatcaaacgaccaccgaaagataggaaccgactttg 41664594  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||| |||| ||||||||||||||||||||||| |||||||    
T  41664593 ccaaccagacaatctagatttaatacgattcacaacaggttcc 41664551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 43612510 - 43612372
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||| ||||| ||||| ||||||||| | | ||| ||||| || | ||| ||||| | ||| || ||||| |||||||||||||  |||||    
T  43612510 ctgatggagctttcaagaatgaaagggcatagacatgaagagaagtcagaactgctttaagaaggatcaaacggccaccgaaagatagaaacctgctatt 43612411  T
Q  116 ccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  43612410 ccaacccgacaatctagatttaatgcgattcacaatagg 43612372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 32267378 - 32267511
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||| |||||||||||||||||||| | ||  |||| ||| || ||  |||||| ||| |||||||| ||||| || |||||||| | |||||| ||    
T  32267378 ctttgaaaaaggaaagtgcatagacaggtagagcagtcatgacggacttttgaagaatcaaacgaccaccgaaagaaaggaaccgactttgccaaccaga 32267477  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||| ||||||| |||||||    
T  32267478 caatctagatttaatacggttcacaacaggttcc 32267511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 11393656 - 11393533
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||| ||||| ||||| ||||||||||||||||| ||||| || | ||| |  || || ||||||||||| || | || |||||| |||||    
T  11393656 ctgatggagctttaaagaatgaaagagcatagacaggcaaagaagtcagaactgctttcaagaggactaagcgaccaccgaacggtaaaaaccggctatt 11393557  T
Q  116 ccaacccgacagtctagatttaat 139  Q
    |||||| |||||||||||||||||    
T  11393556 ccaacctgacagtctagatttaat 11393533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 12332663 - 12332762
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| | ||||||||||| || ||||||||||| | |||||||| |||||| || ||||||||||| || |||||||| |||| ||||||||||||    
T  12332663 ctgatggagccttgaagaaggagagagcatagacaggtagagaggtcaagacagactttagaagaaccaaacggccaccaaacgataaaaaccgactatt 12332762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 24794535 - 24794658
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||| ||||||||||| ||||||||||||||||| ||||| || | ||| |  || || ||||||||||| || |||| |||||| | |||    
T  24794535 ctgatggagctttaaagaaggaaagagcatagacaggcaaagaagtcagaactgctttcaagaggactaagcgaccaccgaacgataaaaaccggcgatt 24794634  T
Q  116 ccaacccgacagtctagatttaat 139  Q
    ||||||  ||||||||||||||||    
T  24794635 ccaacctaacagtctagatttaat 24794658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 43249129 - 43249006
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    ||||||||||||| |||||| |||| |||| || |||||||||  |||| || | ||| | ||| ||||||||||||||||| || ||||||||  ||||    
T  43249129 ctgatggaactttaaagaagaaaagagcatggataggcaaagaattcagaactgctttcaaaaggaccaagcgaccaccaaacgagagaaaccggttatt 43249030  T
Q  116 ccaacccgacagtctagatttaat 139  Q
    |||||| |||| ||||||||||||    
T  43249029 ccaacctgacaatctagatttaat 43249006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 13878812 - 13878678
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||||||||||||| |  |  ||||||||  ||||||||||||  |  |||||||||||||| || ||||||||||     
T  13878812 ctgacggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacgaatttgagaagaattagacgaccaccaaaagaaaggaaccgactatg 13878713  T
Q  116 ccaacccgacagtctagatttaatacgattcacaa 150  Q
    |||||| |||| || || |||||||||||| ||||    
T  13878712 ccaaccagacaatcgagttttaatacgattaacaa 13878678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 36493207 - 36493321
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| | |||||||| |||||| || || ||||| || || |||||||| |||| ||||||||||||  |||| ||||    
T  36493207 ttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttaggagaactaaccggccaccaaacgataaaaaccgactattgaaaccagaca 36493306  T
Q  127 gtctagatttaatac 141  Q
     ||| ||||||||||    
T  36493307 atctcgatttaatac 36493321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 150
Target Start/End: Original strand, 8300627 - 8300752
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||| |||||||||||||||||||| | ||  |||||||| || || ||||||| ||| || ||||| || || ||||||||||| | |||||| |     
T  8300627 ctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatcaaacggccaccgaaggaaagaaaccgactttgccaaccagc 8300726  T
Q  125 cagtctagatttaatacgattcacaa 150  Q
    || ||||||||||||||| |||||||    
T  8300727 caatctagatttaatacggttcacaa 8300752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 9923416 - 9923558
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||| ||||||||| | ||  |||| ||| || || ||||||||||| |||||||||||||| || || ||||| |     
T  9923416 ctgacggagctttgaaaaaggaaagtgtatagacaggtagagcagtcaagacggacttaagaagaaccaaacgaccaccaaaagaaaggaatcgactttg 9923515  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||| |||| ||||  |||||| ||||| |||| |||||||    
T  9923516 ccaaccagacaatctatttttaatgcgattaacaacaggttcc 9923558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 12135047 - 12135174
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||| ||||||||||||||||||||| ||| |   ||||  || ||||| || || | |||||| || |||||| | | ||||||  |||||||||| ||    
T  12135047 ctttaaagaaggaaagtgcatagacatgcataa--gtcaaaaccgatttaaggaggatcaagcggccgccaaaaaagaaaaaccggttattccaacctga 12135144  T
Q  125 cagtctagatttaatacgattcacaatagg 154  Q
    || |||||||||||||||||||||||||||    
T  12135145 caatctagatttaatacgattcacaatagg 12135174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 17700295 - 17700433
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||||||||||||| |  |  |||| ||||||||||||||| | ||| ||||||||||| ||  |  ||| |||||     
T  17700295 ctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagatttgagaagtatcaatcgaccaccaaaggaatggtacctactatg 17700394  T
Q  116 ccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    ||||||  ||| |||||| || |||||||| ||||||||    
T  17700395 ccaaccaaacaatctagactttatacgattaacaatagg 17700433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 26774563 - 26774449
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||||||||| || ||||||| ||| || || ||||||||||| || |  |||| ||| |||||| ||||||| ||||| ||||| |||||||| ||    
T  26774563 ctttgaagaaggagagagcatagataggtaacgaagtcaggacagacttaatgagaatcaaacgaccaacaaaagacagaaaacgactcttccaaccaga 26774464  T
Q  125 cagtctagatttaat 139  Q
     | ||||||||||||    
T  26774463 taatctagatttaat 26774449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 154
Target Start/End: Original strand, 20825132 - 20825253
Alignment:
Q  33 aaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacagtctag 132  Q
    |||||||||||||||||||| |  |  |||| |||| ||||||| |||| ||||||||||||||| || ||  ||| ||||| |||||| |||| |||||    
T  20825132 aaggaaagtgcatagacaggaagcgcagtcaagacatatttgagcagaatcaagcgaccaccaaaggaaaggtacctactatgccaaccagacaatctag 20825231  T
Q  133 atttaatacgattcacaatagg 154  Q
    | || ||||| || ||||||||    
T  20825232 actttatacgtttaacaatagg 20825253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 29721236 - 29721176
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgag 76  Q
    |||| ||| ||||||| |||||||| ||||||||||||||||||| ||||||||| |||||    
T  29721236 ctgacggagctttgaaaaaggaaagagcatagacaggcaaagaggacaggacagacttgag 29721176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 15539872 - 15539938
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaac 82  Q
    |||| ||| |||||||||||||||| ||||| ||||||| |||||||| |||||| || ||||||||    
T  15539872 ctgacggagctttgaagaaggaaagagcataaacaggcagagaggtcaagacagactttagaagaac 15539938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 293 - 328
Target Start/End: Original strand, 7925478 - 7925513
Alignment:
Q  293 actcttatgaaaattcactttcaaacccgacatagc 328  Q
    ||||||||||||||| ||||||||||||||||||||    
T  7925478 actcttatgaaaattaactttcaaacccgacatagc 7925513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 36493468 - 36493511
Alignment:
Q  288 agcatactcttatgaaaattcactttcaaacccgacatagcctc 331  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||    
T  36493468 agcatactcttattaaaatttactttcaaaccagacatagcctc 36493511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 21312448 - 21312415
Alignment:
Q  63 aggacagatttgagaagaaccaagcgaccaccaa 96  Q
    ||||||||||| ||||||||||||||||||||||    
T  21312448 aggacagatttcagaagaaccaagcgaccaccaa 21312415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 11393501 - 11393425
Alignment:
Q  178 gattaccaccaataggcatacccaggtacaagaaaggaacgttacctactttacaacttaacacagaagcagcctca 254  Q
    ||||||| |||||||| | ||| ||||||| ||||||||  || || ||||||||||| ||||| ||||| ||||||    
T  11393501 gattacccccaataggaagaccaaggtacatgaaaggaatcttgcccactttacaactcaacactgaagccgcctca 11393425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 12341391 - 12341451
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaa 85  Q
    ||||||| |||||||| || |||||||||| ||||| || ||| || ||||||||||||||    
T  12341391 ctttgaaaaaggaaagagcgtagacaggcagagaggacatgacggacttgagaagaaccaa 12341451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 20 - 335
Target Start/End: Original strand, 13440877 - 13441192
Alignment:
Q  20 tggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaa 119  Q
    |||| |||||||||||||||| ||||||||||||| |||||||| |||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  13440877 tggagctttgaagaaggaaagcgcatagacaggcagagaggtcaagacatatttgagtagaaccaagcgaccaccacaagagagaaaccgactattccaa 13440976  T
Q  120 cccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgt 219  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||| |||||||||||||| ||      
T  13440977 cccgacagtctagatttaatacgattcacaataggttcccagaaacacaatcttcgagggttaccaccaataggcatacctaggtacaagaaagggacag 13441076  T
Q  220 tacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttcaaacc 319  Q
    | || ||||||||||| ||||| || ||||| |||| |||||| |||||| |||||||||||   || ||||||||||||||||||||||||||||||||    
T  13441077 ttccaactttacaactcaacacggatgcagcttcatataaccaggacgacccaatattcaccaccaccagcatactcttatgaaaattcactttcaaacc 13441176  T
Q  320 cgacatagcctcgaac 335  Q
    ||||||||||||||||    
T  13441177 cgacatagcctcgaac 13441192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 16 - 331
Target Start/End: Original strand, 45993391 - 45993706
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||||||||| ||||| ||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||| || || ||||||||    
T  45993391 ctgacggagctttgaagaaagaaagagcatagacaggcagagaggtcaacacagatttgagaagaaccaaacgaccaccaaaagagaggaaacgactatt 45993490  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| ||||||||||| || ||||||||||||| ||| ||| |||||| ||| |  ||||||||||||||||| |||||||||| ||| ||||||||     
T  45993491 ccaacctgacagtctagactttatacgattcacaacagggtcccagaaacacaaacgacgaggattaccaccaatcggcatacccaagtataagaaaggc 45993590  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttca 315  Q
    || || || ||||||||| ||| |||||| || ||||||  ||||||||| || ||||| || |||| ||| |||  |||||| | |||||| |||||||    
T  45993591 acctttcccactttacaatttagcacagacgctgcctcaaataaccaagaagatgcaatgttaaccccaaccagcgaactcttgttaaaattaactttca 45993690  T
Q  316 aacccgacatagcctc 331  Q
    |||| |||| ||||||    
T  45993691 aaccagacaaagcctc 45993706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 16 - 331
Target Start/End: Original strand, 34232516 - 34232831
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||||| ||||||||| ||| ||||||||| ||||| || |  |||||||  || ||||||||||||| ||| ||||||||    
T  34232516 ctgatggagctttgaagaaggaaagcgcatagacaagcagagaggtcagaacagactttaacagaaccagacggccaccaaaagataaaaaacgactatt 34232615  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| ||||  |||| ||| ||||||||||||| ||||||| | |||| ||| |  |||||||| || ||||||||||  |||| |||||| || ||     
T  34232616 ccaaccagacaacctagcttttatacgattcacaaaaggttcccaaaaactcaaacgccgaggatttcccccaataggcaagcccaagtacaaaaacggc 34232715  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaacaagcatactcttatgaaaattcactttc 314  Q
    || ||||| ||||||||| |||| ||||| || ||||||  |||||| || || |  |||||||| || | ||||| ||||||||||||||||||| |||    
T  34232716 accttacccactttacaatttaaaacagacgctgcctcacttaaccacgaagaagagatattcacgccaaccaagc-tactcttatgaaaattcaccttc 34232814  T
Q  315 aaacccgacatagcctc 331  Q
    ||||| ||||| |||||    
T  34232815 aaaccagacatggcctc 34232831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 254
Target Start/End: Original strand, 43572360 - 43572594
Alignment:
Q  20 tggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaa 119  Q
    |||| |||| ||||||||||| ||||| ||||||| ||| ||||  || | ||| || || | ||||||||||||||| || |||||||| ||||||||     
T  43572360 tggagctttaaagaaggaaagagcataaacaggcagagaagtcaaaacggctttcaggaggatcaagcgaccaccaaacgagagaaaccggctattccac 43572459  T
Q  120 cccgacagtctagatttaatacgattcacaataggttcctagaaacgcaa-tcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacg 218  Q
    ||||||| ||||||||||||||||||||| | | | ||| | ||||| || ||| || |||||||| |||||||||||||| || ||||| |||||||      
T  43572460 cccgacaatctagatttaatacgattcacgacatgatccca-aaacgaaagtctccgcggattacccccaataggcatacctagatacaaaaaaggaatc 43572558  T
Q  219 ttacctactttacaacttaacacagaagcagcctca 254  Q
    ||||||||||||||||| ||||| || |||||||||    
T  43572559 ttacctactttacaactcaacactgaggcagcctca 43572594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 158
Target Start/End: Complemental strand, 4937444 - 4937311
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| || ||||||| ||| |||||||| |||||||| |||||||| | |||||| ||    
T  4937444 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgactttgccaaccaga 4937345  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  4937344 caatctagatttaatacgatccaccacaggttcc 4937311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 330
Target Start/End: Original strand, 4078092 - 4078402
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| || ||||||||||||| ||||||||||||| |||||     |||||||| | ||||| ||  || || |||||||||| ||| ||||||||    
T  4078092 ctgatggagctctgaagaaggaaagcgcatagacaggcagagagg-----acagattttaaaagaatcagacggccgccaaaagataaaaaacgactatt 4078186  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| ||||  || | |||||| |||||||||||||| ||| | |||| |||||   ||| ||| || ||||||||||||||||  ||||  ||  |     
T  4078187 ccaaccagacaacctggctttaatgcgattcacaataggatcccaaaaactcaatcgctgagaattccctccaataggcatacccaaatacataaactgt 4078286  T
Q  216 acgttacctactttacaacttaacac-agaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttc 314  Q
    || ||||| ||||| |||||||| ||  || || |  |||| ||||||||| |  || |||||||| | ||| |  |||||||||||||||||||| |||    
T  4078287 accttacccactttgcaacttaaaacgggacgccgtgtcatttaaccaagatggggcgatattcacaccaaccaaaatactcttatgaaaattcaccttc 4078386  T
Q  315 aaacccgacatagcct 330  Q
    | ||| ||||||||||    
T  4078387 agaccggacatagcct 4078402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 254
Target Start/End: Original strand, 18768227 - 18768456
Alignment:
Q  20 tggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaa 119  Q
    |||| |||||||||| ||||| ||||||||||||| ||| || || |  ||||| || |||| ||| |||||| ||||||| ||||||| |||| |||||    
T  18768227 tggagctttgaagaaagaaagagcatagacaggcagagatgtaagaattgattttaggagaatcaaacgaccaacaaaagagagaaacctactaatccaa 18768326  T
Q  120 cccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgt 219  Q
    |||||||||||||||||||| ||||| || || |||||  | ||  | | ||| || ||||||||||| |||||     | |||||||| |||||||  |    
T  18768327 cccgacagtctagatttaatgcgattaacgatcggttctcaaaactgaagtctccgcggattaccacctatagg-----ctaggtacaaaaaaggaattt 18768421  T
Q  220 tacctactttacaacttaacacagaagcagcctca 254  Q
    |||| ||||||||||| ||||| || || ||||||    
T  18768422 tacccactttacaactcaacaccgacgctgcctca 18768456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 46626637 - 46626775
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||| ||||| ||||||||||| | ||| |||| ||||||||| |  |||||||| || || ||||| || |||||||| |||||    
T  46626637 ctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctccaaaggaaagaaaccggctatt 46626736  T
Q  116 ccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    ||||||||  ||||||| |||||| |||| |||||||||    
T  46626737 ccaacccgtaagtctagctttaattcgatgcacaatagg 46626775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 33820893 - 33820794
Alignment:
Q  8 agataatac-tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||| ||||||| ||||||||||||||||  |||||| ||||| ||||||||||||||| |||||||||| ||| |||||  |||||||||||||    
T  33820893 agataatacctgatggagctttgaagaaggaaagaacatagataggcagagaggtcaggacagaattgagaagaatcaaccgacccgcaaaagatagaaa 33820794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 25 - 148
Target Start/End: Original strand, 41340373 - 41340496
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||| |||||||||  || ||| ||||| || ||||| || || | ||||||||||||||| || ||||| || ||||| ||||||||    
T  41340373 ctttgaagaaggaaagggcatagacatacagagaagtcagaaccgatttaaggaggatcaagcgaccaccaaaggagagaaatcggctatttcaacccga 41340472  T
Q  125 cagtctagatttaatacgattcac 148  Q
    || |||||||||||| ||||||||    
T  41340473 caatctagatttaatgcgattcac 41340496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 17721450 - 17721592
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||||||||||||| | ||  ||||||||  | || ||||||||||| |||||||||||||| || |||||||| |     
T  17721450 ctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacgaacttaagaagaaccaaacgaccaccaaaagaaaggaaccgactttg 17721549  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||| |||| ||||  |||||| ||||| |||| |||||||    
T  17721550 ccaaccagacaatctatttttaatgcgattaacaacaggttcc 17721592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 36227476 - 36227338
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||| ||||| ||||||||||| | ||| ||||  || | ||| ||||| | |||||| ||||| || || ||||||   |||||    
T  36227476 ctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaaaactgctttaagaaggatcaagcggccaccgaacgagagaaacttgctatt 36227377  T
Q  116 ccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  36227376 ccaacccgacagtctagacttaatgcgattcacaatagg 36227338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 22819042 - 22818955
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatag 103  Q
    |||||||| || ||||||||||||||||||||||||| | ||||| ||||||||  || |||||||| |  |||||||||||||||||    
T  22819042 ctgatggagctctgaagaaggaaagtgcatagacaggaagagaggacaggacagccttaagaagaactagacgaccaccaaaagatag 22818955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 27218436 - 27218337
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||||||||||||| | |  || |||| |||||| || ||||||||||||||||| || ||||||||||| ||||| | ||| |||||||    
T  27218436 ttgaagaaggaaagtgcatagacatgaagcgaagtcaagacagacttaagaagaaccaagcgacccccgaaagatagaaaacgactttgccaccccgaca 27218337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 12378293 - 12378059
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||| | |||||||||| ||||| |||| || ||||||||| |||| ||||||||| ||||| |||||| | || ||||| || | ||||||||||||    
T  12378293 ctgatgaagctttgaagaaagaaagagcattgataggcaaagaagtcaagacagattttagaagtaccaagtgtccgccaaaggagataaaccgactatt 12378194  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    | ||| ||    ||||| || ||| |||||||||||||| ||| | ||||  |  |   |  ||||||| |||||||| |  || | |||||| ||||||    
T  12378193 caaactcgtacttctagcttcaattcgattcacaatagggtcccaaaaactaagacgatgcagattacccccaatagggaagcctaagtacaaaaaagga 12378094  T
Q  216 acgttacctactttacaacttaacacagaagcagc 250  Q
    || ||||| ||||| ||||||||||| ||||||||    
T  12378093 accttacccactttgcaacttaacaccgaagcagc 12378059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 29968789 - 29968931
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||| ||||||||||| | ||  |||||||| || || ||||||| ||| || ||||| || || || |||||||| |     
T  29968789 ctgacggagctttgaaaaaggaaagagcatagacaggtagagcagtcaggacggactttagaagaatcaaacggccaccgaaggaaaggaaccgactttg 29968888  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||| | || ||||||||||||||| ||||||| |||||||    
T  29968889 ccaaccagccaatctagatttaatacggttcacaacaggttcc 29968931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 140
Target Start/End: Complemental strand, 45164861 - 45164748
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| |  | ||||| |||||| || | ||||| ||||||||| ||||| || ||||||||||| | |||||  |||     
T  45164861 ttgaagaaggaaagagcatagacaggtagcgcggtcaagacagactttaaaagaatcaagcgacctccaaaggaaagaaaccgactttgccaactagacg 45164762  T
Q  127 gtctagatttaata 140  Q
    ||||||||||||||    
T  45164761 gtctagatttaata 45164748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 41805073 - 41804985
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    ||||||||||| || ||||||||||| | |||||||| |||||| || |||||||| || || |||||||| |||| ||||||||||||    
T  41805073 ttgaagaaggagagagcatagacaggtagagaggtcaagacagactttagaagaactaaccggccaccaaacgataaaaaccgactatt 41804985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 25018616 - 25018528
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    ||||||||||||||  |||||| ||| |||||||||| |||||| || |||||||| || |  |||||||| |||| ||||||||||||    
T  25018616 ttgaagaaggaaagaacatagataggtaaagaggtcaagacagactttagaagaactaacctgccaccaaacgataaaaaccgactatt 25018528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 23887823 - 23887880
Alignment:
Q  51 ggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaacc 108  Q
    |||| ||||||||||||||| |||||||||| ||| || || ||||||||||||||||    
T  23887823 ggcagagaggtcaggacagacttgagaagaatcaatcggcccccaaaagatagaaacc 23887880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 293 - 328
Target Start/End: Complemental strand, 4937176 - 4937141
Alignment:
Q  293 actcttatgaaaattcactttcaaacccgacatagc 328  Q
    ||||||||||||||| ||||||||||||||||||||    
T  4937176 actcttatgaaaattaactttcaaacccgacatagc 4937141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 11276573 - 11276463
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||||||||||||| | ||  |||||||| || || || |||| ||| |||||||| ||||| || |||| ||| |     
T  11276573 ctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttaggagaatcaaacgaccaccgaaagaaaggaaccaactttg 11276474  T
Q  116 ccaacccgaca 126  Q
    |||||| ||||    
T  11276473 ccaaccagaca 11276463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 17056356 - 17056430
Alignment:
Q  28 tgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagata 102  Q
    ||||||||||||  ||||||||||| | ||||| || |||||| || || |||||||  ||||||||||||||||    
T  17056356 tgaagaaggaaaaagcatagacaggaagagaggacaagacagacttaaggagaaccagacgaccaccaaaagata 17056430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 19735333 - 19735375
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaaga 58  Q
    |||||||| |||| ||||||||||| |||||||||||||||||    
T  19735333 ctgatggagctttaaagaaggaaagagcatagacaggcaaaga 19735375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 23898999 - 23899056
Alignment:
Q  51 ggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaacc 108  Q
    |||| ||||||||||||||| |||||||||| ||| |  || ||||||||||||||||    
T  23898999 ggcagagaggtcaggacagacttgagaagaatcaatcagcccccaaaagatagaaacc 23899056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Complemental strand, 28173052 - 28172999
Alignment:
Q  272 aatattcaccctaacaagcatactcttatgaaaattcactttcaaacccgacat 325  Q
    ||||| ||||| ||| |||||||| ||||||||||| ||||||||||| |||||    
T  28173052 aatatccaccccaaccagcatacttttatgaaaattgactttcaaaccagacat 28172999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 28740251 - 28740179
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaa 97  Q
    |||||||||||||||| ||||| ||||||| ||| | || ||||||||| || |||   ||||||||||||||    
T  28740251 ctttgaagaaggaaagagcataaacaggcagagaagacatgacagatttaaggagagttaagcgaccaccaaa 28740179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 162; Significance: 2e-86; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 26 - 235
Target Start/End: Complemental strand, 6175792 - 6175583
Alignment:
Q  26 tttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgac 125  Q
    ||||||||||||||||||||||||||||| ||| |||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6175792 tttgaagaaggaaagtgcatagacaggcagagatgtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaaaccgactattccaacccgac 6175693  T
Q  126 agtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgttaccta 225  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||| || || ||||    
T  6175692 agtctagatttaatatgattcacaataggttcctagaaacacaatcttcgagggttaccaccaataggcatacctaggtacaagaaagggacatttccta 6175593  T
Q  226 ctttacaact 235  Q
    ||||||||||    
T  6175592 ctttacaact 6175583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 331
Target Start/End: Complemental strand, 43120996 - 43120684
Alignment:
Q  19 atggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattcca 118  Q
    ||||| |||||||||||||||  |||||||||| || |||||||||||||||||| | |||||||| |||||| ||||||||||  || |||||||||||    
T  43120996 atggagctttgaagaaggaaaacgcatagacagacagagaggtcaggacagattttaaaagaaccaggcgaccgccaaaagataagaaacgactattcca 43120897  T
Q  119 acccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacg 218  Q
    ||| ||||||||| |||||||  ||||||||||||| ||| | |||  |||||  ||||||||||| || |||| ||||||||  |||| ||| |  ||     
T  43120896 accagacagtctaaatttaatctgattcacaataggatcccaaaaaatcaatcgccgaggattacctccgatagacatacccaactacatgaatgacacc 43120797  T
Q  219 ttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttcaaac 318  Q
    || || ||||| || ||||| ||||| || ||||||| |||||| || |  |||||||| || | ||| |   | ||||||||||| ||||| |||||||    
T  43120796 ttgcccactttgcagcttaaaacagatgccgcctcatttaaccacgagggtgcaatattgacaccaaccaaattgctcttatgaaagttcaccttcaaac 43120697  T
Q  319 ccgacatagcctc 331  Q
      |||||||||||    
T  43120696 ttgacatagcctc 43120684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 17 - 331
Target Start/End: Original strand, 23819381 - 23819695
Alignment:
Q  17 tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattc 116  Q
    ||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||| || |  ||||||| |||||||||||||||||  || |||||||||    
T  23819381 tgatggagctttgaagaaggaaagcgcatatacaggcagagaggtcaggacagactttaagagaaccatgcgaccaccaaaagataagaaacgactattc 23819480  T
Q  117 caacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaa 216  Q
    ||||| ||||  |||  |||||| |||||||||||| | ||| | |||| |||||  ||||||||||| || |||| |||| ||| ||||| ||| |  |    
T  23819481 caaccagacaacctaactttaatccgattcacaataagatcccaaaaactcaatcgccgaggattacctccgatagacatatccaagtacatgaatgaca 23819580  T
Q  217 cgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttcaa 316  Q
    | || || ||||| || ||||| ||||| || ||||| | |||||| || |  |||||||| || | ||| |   | ||||||||||| ||||| |||||    
T  23819581 ccttgcccactttgcagcttaaaacagatgccgcctcgtttaaccacgagggtgcaatattgacaccaaccaaactgctcttatgaaagttcaccttcaa 23819680  T
Q  317 acccgacatagcctc 331  Q
    ||| |||||||||||    
T  23819681 acctgacatagcctc 23819695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 235
Target Start/End: Complemental strand, 42674759 - 42674544
Alignment:
Q  20 tggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaa 119  Q
    |||| |||||||||| ||||| ||||||||||||| ||| ||||| || |||||||| |||| |||||| ||||||||||| ||||| | ||||||||||    
T  42674759 tggagctttgaagaaagaaagagcatagacaggcagagatgtcagaactgatttgaggagaatcaagcggccaccaaaagagagaaatctactattccaa 42674660  T
Q  120 cccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgt 219  Q
    | || ||||||||||||||| |||||||| || |||||| | ||  | | ||| || ||||||||||| |||||||  || |||||||| |||||||       
T  42674659 ctcgtcagtctagatttaatgcgattcacgatcggttcccaaaactgaagtctccgcggattaccacctataggcaggcctaggtacaaaaaaggaattc 42674560  T
Q  220 tacctactttacaact 235  Q
    |||| |||||||||||    
T  42674559 tacccactttacaact 42674544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 24926010 - 24925872
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||| ||||||||||||||||||| ||| ||||  || ||||| || || | ||||||||| |||||||| ||||||||  ||||    
T  24926010 ctgatggagctttgaagaaagaaagtgcatagacaggcagagaagtcaaaaccgatttaaggaggatcaagcgaccgccaaaagagagaaaccgtttatt 24925911  T
Q  116 ccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  24925910 ccaacccgacagtctagattttatacgattcacaatagg 24925872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 331
Target Start/End: Original strand, 50545058 - 50545373
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||||  |||||||| || | ||||||||||||||| || | ||||||||  || || |||||||||| ||| ||||||||    
T  50545058 ctgatggacctttgaagaaggaaaacgcatagacgggtagagaggtcaggacagactttaaaagaaccagacggccgccaaaagataaaaaacgactatt 50545157  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||  ||||  |||| ||| || |||  ||||||||| ||| | |||| |||||  |||||||| || ||||||| |||||||| |||||  || ||     
T  50545158 ccaactagacaacctagcttttatgcgagacacaataggatcccaaaaactcaatcgccgaggatttcctccaatagacatacccaagtacataaacggc 50545257  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttca 315  Q
    |  ||||| ||||| || ||||| ||||| || ||||||| ||||||||| |   | ||||| || | ||| |  || ||||||||||||||||| ||||    
T  50545258 atcttacccactttgcagcttaagacagacgccgcctcatttaaccaagagggaactatatttacaccaaccaaaatgctcttatgaaaattcaccttca 50545357  T
Q  316 aacccgacatagcctc 331  Q
    |||| |||||||||||    
T  50545358 aaccggacatagcctc 50545373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 330
Target Start/End: Complemental strand, 46907994 - 46907681
Alignment:
Q  17 tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattc 116  Q
    ||||||| |||||||||||||||| ||||||| ||||| ||||||||| ||||| || | ||||||||| || || | ||| ||  |||| |||||||||    
T  46907994 tgatggagctttgaagaaggaaagagcatagataggcagagaggtcagaacagactttaaaagaaccaaacggccgcaaaaggaatgaaatcgactattc 46907895  T
Q  117 caacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaa 216  Q
    ||||| |||||||||| |||||||||||||| |||||| ||| | |||| ||||| ||||  |||||| |  || ||||  |||| ||||| ||| |  |    
T  46907894 caaccagacagtctagctttaatacgattcaaaataggatcccaaaaactcaatcgtcgacaattacctctgatgggcaagcccaagtacatgaacgaca 46907795  T
Q  217 cgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttcaa 316  Q
      | ||| |||  ||| || || ||||| || |||||||  |||||||| |  ||||| || || | ||| | |||||||||||||||||| || |||||    
T  46907794 tctgacccactcgacatctcaaaacagatgccgcctcattcaaccaagagggggcaatgttaacaccaaccaacatactcttatgaaaatttaccttcaa 46907695  T
Q  317 acccgacatagcct 330  Q
    ||||||||||||||    
T  46907694 acccgacatagcct 46907681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 48569348 - 48569214
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| ||||||| |||||||||||||||||||| |  |  |||||||| ||||||||||||| ||| |||||||||||||| || ||||||||||     
T  48569348 ctgatggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacggatttgagaagaatcaaacgaccaccaaaagaaaggaaccgactatg 48569249  T
Q  116 ccaacccgacagtctagatttaatacgattcacaa 150  Q
    |||||| |||| ||||||||| |||||||| ||||    
T  48569248 ccaaccagacaatctagattttatacgattaacaa 48569214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 2365102 - 2365235
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| || ||||||| ||| |||||||| |||||||| |||||||| | |||||| ||    
T  2365102 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgactttgccaaccaga 2365201  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  2365202 caatctagatttaatacgatccaccacaggttcc 2365235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 21739814 - 21739690
Alignment:
Q  15 actgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactat 114  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||| ||| | || | ||| | ||| |||||||||||||| || ||||||||||| ||||    
T  21739814 actgatggagctttaaagaaggaaagagcatagacaggcaaagaagtcggaactgctttcaaaaggaccaagcgaccaccgaacgatagaaaccggctat 21739715  T
Q  115 tccaacccgacagtctagatttaat 139  Q
    ||||||| |||||||||||||||||    
T  21739714 tccaacctgacagtctagatttaat 21739690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 19 - 325
Target Start/End: Complemental strand, 14863778 - 14863472
Alignment:
Q  19 atggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattcca 118  Q
    ||||| |||| ||||||||||| ||||||||||||||||| ||||| || | ||| |  || || ||||||||||| || |||| |||||| ||||||||    
T  14863778 atggagctttaaagaaggaaagagcatagacaggcaaagaagtcagaactgctttcaagaggactaagcgaccaccgaacgataaaaaccggctattcca 14863679  T
Q  119 acccgacagtctagatttaatacgattcacaataggttcctagaaacg-caatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaac 217  Q
    ||| |||||||||||||||||   |||||||| ||| ||| | ||||| ||| |  || |||||||| |||||||| | ||| ||||||| ||||||||     
T  14863678 accagacagtctagatttaattttattcacaacagggtccca-aaacgacaaacgacgcggattacccccaataggaagaccaaggtacatgaaaggaat 14863580  T
Q  218 gttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttcaaa 317  Q
     || || ||||||||||| |||||  |||| ||||||   |||||||||   | |||||| || | ||| | || ||| |||| |||||| || ||||||    
T  14863579 cttgcccactttacaactcaacactaaagccgcctcaaccaaccaagactcggaaatattaacaccaactaacaaacttttattaaaattaaccttcaaa 14863480  T
Q  318 cccgacat 325  Q
    ||||||||    
T  14863479 cccgacat 14863472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 10868459 - 10868593
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    ||||| || |||| ||||||||||| ||||| ||||||||||| ||||| || | ||| | ||| ||||||||||||||||| || |||||||| |||||    
T  10868459 ctgatagagctttaaagaaggaaagagcatatacaggcaaagatgtcagaactgctttcataaggaccaagcgaccaccaaacgagagaaaccggctatt 10868558  T
Q  116 ccaacccgacagtctagatttaatacgattcacaa 150  Q
    ||||||||||| |||||||||||| | ||||||||    
T  10868559 ccaacccgacattctagatttaattctattcacaa 10868593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 254
Target Start/End: Complemental strand, 30166648 - 30166410
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||| ||||| ||||||||||| | ||| |||| ||||||||| |  |||||||| || || ||||| || |||||||| |||||    
T  30166648 ctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctccaaaggaaagaaaccggctatt 30166549  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||||   ||||||| |||||| |||||||||||||| ||| | ||||  |  |  || ||||| || ||||||||||  |||| |||||  ||||||    
T  30166548 ccaacccataagtctagctttaattcgattcacaataggatcccaaaaactaagacgacgcggatttcccccaataggcaagcccaagtacataaaagga 30166449  T
Q  216 acgttacctactttacaacttaacacagaagcagcctca 254  Q
    || ||||| |||||||| || ||||| ||||| ||||||    
T  30166448 accttacccactttacagctcaacactgaagctgcctca 30166410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 34332140 - 34331998
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||| || |||||||||||||||||||| | ||  ||||||||||| || || |||| ||| |||||||| ||||| || |||||||| |     
T  34332140 ctgacggagctttaaaaaaggaaagtgcatagacaggtagagcagtcaggacagactttagtagaatcaaacgaccaccgaaagaaaggaaccgactttg 34332041  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||| |||| ||||||||||||||||||||||| |||||||    
T  34332040 ccaaccagacaatctagatttaatacgattcacaacaggttcc 34331998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 241
Target Start/End: Original strand, 36709728 - 36709949
Alignment:
Q  20 tggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaa 119  Q
    |||| |||||||||| ||||| |||| |||||||| ||| || || || |||||||| || | ||| || ||||| ||||| ||||| | ||||||||||    
T  36709728 tggagctttgaagaaagaaagagcatcgacaggcagagatgttagaactgatttgaggaggatcaaacggccaccgaaagaaagaaatctactattccaa 36709827  T
Q  120 cccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgt 219  Q
    |||||||||||||||||||| |||||||| || |||||| | ||  | ||||| || ||||||||||| || ||||  || |||||||  |||||||  |    
T  36709828 cccgacagtctagatttaatgcgattcacgattggttcccaaaactgaaatctccgcggattaccacctattggcaggcctaggtacataaaaggaattt 36709927  T
Q  220 tacctactttacaacttaacac 241  Q
    |  | ||||||||||| |||||    
T  36709928 tttccactttacaactcaacac 36709949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 31675746 - 31675869
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||||||||||||||| |||||||||||||| |||||||||||||| ||||| |||||||| ||||| |||||||| ||||| ||| | |     
T  31675746 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaggacagacttgagtagaaccaaccgacccccaaaagagagaaagcgattttg 31675845  T
Q  116 ccaacccgacagtctagatttaat 139  Q
    ||| ||||| | |||||| |||||    
T  31675846 ccaccccgataatctagacttaat 31675869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 19876068 - 19876182
Alignment:
Q  26 tttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgac 125  Q
    ||||||||||||||||||||||||||| |  || ||||||||||| || ||||||||||||||||| || ||||||||||| | ||| | ||| ||||||    
T  19876068 tttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaaccaagcgacccccgaaagatagaaaacaactttgccaccccgac 19876167  T
Q  126 agtctagatttaata 140  Q
    | ||||| |||||||    
T  19876168 aatctagttttaata 19876182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 31920668 - 31920554
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||| |||||||||||||| |||||||||||||| ||||| |||||||| ||||| |||||||| ||||| ||| | | ||| |||||    
T  31920668 ctttgaagaaggaaagggcatagacaggcaatgaggtcaggacagacttgagtagaaccaaccgacccccaaaagagagaaagcgattttgccaccccga 31920569  T
Q  125 cagtctagatttaat 139  Q
     | |||||| |||||    
T  31920568 taatctagacttaat 31920554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 19919545 - 19919426
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  || |||||  | || || |||| ||| |||||||| ||||||||||||||||| | |||||| ||    
T  19919545 ctttgaagaaggaaagtgcatagacaggtagagcagttaggacgaactttagtagaatcaaacgaccaccgaaagatagaaaccgactttgccaaccaga 19919446  T
Q  125 cagtctagatttaatacgat 144  Q
    || |||||||||||||||||    
T  19919445 caatctagatttaatacgat 19919426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 15481083 - 15480970
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||| ||||| ||||||||| ||| ||| ||||| |||| |||||| || | ||| || ||||||||||| ||||| | ||||||    
T  15481083 ctgatggagctttgaagaaagaaagagcatagacaagcagagatgtcagaacagctttgaggaggatcaaacggccaccaaaagaaagaaatctactatt 15480984  T
Q  116 ccaacccgacagtc 129  Q
    ||||||||||||||    
T  15480983 ccaacccgacagtc 15480970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 40513038 - 40512926
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| || |  ||||||||||| || ||||| ||||| ||||| |||||||| ||||| ||||| | ||| ||| |||    
T  40513038 ttgaagaaggaaagagcatagacaggtaatgcagtcaggacagacttaagaaggaccaaccgacctccaaaagagagaaaacgactttgccaccccaaca 40512939  T
Q  127 gtctagatttaat 139  Q
    |||||||||||||    
T  40512938 gtctagatttaat 40512926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 962488 - 962365
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||| ||||||||||| |  |  |||||||||||||||||||| | ||| || ||||||||||| || ||||||||||     
T  962488 ctgacggagctttgaaaaaggaaagagcatagacaggaagtgcagtcaggacagatttgagaaggatcaaccggccaccaaaagaaaggaaccgactatg 962389  T
Q  116 ccaacccgacagtctagatttaat 139  Q
    |||||| |||| ||||| ||||||    
T  962388 ccaaccagacaatctagctttaat 962365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 19891492 - 19891630
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| ||||||||| |||| ||||| |  |  |||| |||||||||||| |||| || | |||||| ||| || || ||||||||||     
T  19891492 ctgacggagctttgaaaaaggaaagttcataaacaggaagcgcagtcaagacagatttgagtagaatcaggtgaccactaaaggaaaggaaccgactatg 19891591  T
Q  116 ccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    | |||| |||| |||||||||||||||||| ||||||||    
T  19891592 ctaaccagacaatctagatttaatacgattaacaatagg 19891630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 140
Target Start/End: Original strand, 14309406 - 14309518
Alignment:
Q  28 tgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacag 127  Q
    ||||||||||||| ||||||||| | |  |||||||||||||||||||| ||||| || || || || ||||||| ||| ||||| | ||| |||| ||     
T  14309406 tgaagaaggaaagagcatagacaagaagcgaggtcaggacagatttgaggagaactaatcggcccccgaaagataaaaagcgactttgccaccccgccaa 14309505  T
Q  128 tctagatttaata 140  Q
    |||||||||||||    
T  14309506 tctagatttaata 14309518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 154
Target Start/End: Complemental strand, 12341563 - 12341442
Alignment:
Q  33 aaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacagtctag 132  Q
    |||||||||| ||||||||| |  |  |||| ||||||||||||||| | ||||||||||||||| || ||  ||| ||||| |||||| |||| |||||    
T  12341563 aaggaaagtgtatagacaggaagcgcagtcaagacagatttgagaagtatcaagcgaccaccaaaggaaaggtacctactatgccaaccagacaatctag 12341464  T
Q  133 atttaatacgattcacaatagg 154  Q
    | || ||| |||| ||||||||    
T  12341463 actttatatgattaacaatagg 12341442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 150
Target Start/End: Original strand, 16179764 - 16179889
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||| |||||||||||||||||||| |  |   |||||||||||||||||||   ||| | ||||||||| || || ||| |||||| |||||  ||    
T  16179764 ctttgaaaaaggaaagtgcatagacaggaagtgcaatcaggacagatttgagaagggtcaacctaccaccaaaggaaaggaactgactatgccaactaga 16179863  T
Q  125 cagtctagatttaatacgattcacaa 150  Q
    || |||||||||||| ||||| ||||    
T  16179864 caatctagatttaattcgattaacaa 16179889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 17271061 - 17270962
Alignment:
Q  22 gaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacc 121  Q
    |||||||||| ||| |||| || |||||| | | ||||||||||||||| || |||| || ||| ||||| |||||||| ||||| ||||| ||||||||    
T  17271061 gaactttgaaaaagaaaagagcgtagacatgaagagaggtcaggacagacttcagaaaaatcaaacgacccccaaaagagagaaaacgacttttccaacc 17270962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 34830220 - 34830331
Alignment:
Q  29 gaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcga-ccaccaaaagatagaaaccgactattccaacccgacag 127  Q
    |||||||||||| ||||||||||| ||   |||||||||||| || ||||| ||||| ||| || ||| |||| ||||| ||||| | ||| |||||||     
T  34830220 gaagaaggaaagagcatagacaggtaacacggtcaggacagacttaagaaggaccaaccgaccccccataagagagaaaacgactttgccaccccgacaa 34830319  T
Q  128 tctagatttaat 139  Q
    ||||||||||||    
T  34830320 tctagatttaat 34830331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 53942061 - 53942184
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||||||||||||||| ||||||||| | |  ||||||| |||||| || | ||| ||||| ||||||||| | |||||||| ||||| |     
T  53942061 ctgacggagctttgaagaaggaaagagcatagacaagaagcgaggtcaagacagactttaaaaggaccaaccgaccaccataggatagaaagcgactctg 53942160  T
Q  116 ccaacccgacagtctagatttaat 139  Q
    ||| ||||||| ||| || |||||    
T  53942161 ccaccccgacaatctggacttaat 53942184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 47538082 - 47538135
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacag 69  Q
    ||||||||  ||||||||||||||| ||||||||||| | ||||||||||||||    
T  47538082 ctgatggagttttgaagaaggaaagcgcatagacaggtagagaggtcaggacag 47538135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 16672335 - 16672247
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    ||||||||||||||  |||||||||| | |||||||| |||||| || || ||||| || || ||| |||| |||| ||||||||||||    
T  16672335 ttgaagaaggaaagaacatagacaggtagagaggtcaagacagactttaggagaactaaccggccatcaaacgataaaaaccgactatt 16672247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 293 - 328
Target Start/End: Original strand, 2365370 - 2365405
Alignment:
Q  293 actcttatgaaaattcactttcaaacccgacatagc 328  Q
    ||||||||||||||| ||||||||||||||||||||    
T  2365370 actcttatgaaaattaactttcaaacccgacatagc 2365405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 6825638 - 6825752
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| | | |||||| ||| || || |  ||||| || || |||||||| |||| |||| |||||||  |||| ||||    
T  6825638 ttgaagaaggaaagagcatagacaggtagaaaggtcaagacggactttaagagaactaaccggccaccaaacgataaaaactgactattgaaaccagaca 6825737  T
Q  127 gtctagatttaatac 141  Q
     ||| ||||||||||    
T  6825738 atctcgatttaatac 6825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 8948344 - 8948278
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaac 82  Q
    |||| ||| |||||||||||||||  ||||||||||| | ||||||||||||| | || ||||||||    
T  8948344 ctgagggagctttgaagaaggaaatagcatagacagggagagaggtcaggacaaacttaagaagaac 8948278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 44888731 - 44888805
Alignment:
Q  28 tgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagata 102  Q
    ||||||||||||  ||||||||||| | ||||| || |||||| || || |||||||  ||||||||||||||||    
T  44888731 tgaagaaggaaaaagcatagacaggaagagaggacaagacagacttaaggagaaccagacgaccaccaaaagata 44888805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 55367433 - 55367547
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||| |||||||| || |||||| ||||||||| ||||||||| ||||  | |||||| || || || || || ||||| ||||| | ||| || ||    
T  55367433 ctttgaaaaaggaaagagcgtagacaagcaaagaggacaggacagacttgatcaaaaccaatcggcctccgaatgagagaaaacgactctgccacccgga 55367532  T
Q  125 cagtctagatttaat 139  Q
    || ||||||||||||    
T  55367533 caatctagatttaat 55367547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 7164315 - 7164399
Alignment:
Q  28 tgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgact 112  Q
    ||||||||||||| ||||| | ||| | |||||||| |||| | || |||||||| || |||||||||||  ||| |||||||||    
T  7164315 tgaagaaggaaagagcataaataggaagagaggtcaagacaaactttagaagaactaaccgaccaccaaacaataaaaaccgact 7164399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 52250439 - 52250327
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| | |||||||| |||| | || || ||||| || |  || ||||| ||||  |||||||||||  | || ||||    
T  52250439 ttgaagaaggaaagcgcatagacaggtagagaggtcaagacaaactttaggagaactaacctgcccccaaacgataagaaccgactattgaacccagaca 52250340  T
Q  127 gtctagatttaat 139  Q
    |||| ||||||||    
T  52250339 gtctcgatttaat 52250327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 2e-65; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 22094574 - 22094328
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||||||||  | ||||||||||| || || ||||||||    
T  22094574 ctgacggagctttgaagaaggaaagagcatagacaggcaaagaagtcaagacagctttgagaagaaccaaatggccaccaaaagagaggaaacgactatt 22094475  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||| |||||| ||| | |||||||||||||||||| |||||||||| ||| |||||||||    
T  22094474 ccaacccgacagtctagctttaatacgattcacaacaggatcccagaaacacaaacgtcgaggattaccaccaatcggcatacccaagtataagaaagga 22094375  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaacca 262  Q
    || ||||| ||||||||| ||| ||| || ||| |||||| ||||||    
T  22094374 accttacccactttacaatttagcaccgacgcaacctcatttaacca 22094328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 254
Target Start/End: Complemental strand, 30509344 - 30509110
Alignment:
Q  20 tggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaa 119  Q
    |||| |||| ||||||||||| ||||||||||||| ||| ||||  || | ||| ||||| | |||||||||||||||||| |||||||| ||||||||     
T  30509344 tggagctttaaagaaggaaagagcatagacaggcagagaagtcaacacggctttcagaaggatcaagcgaccaccaaaagagagaaaccggctattccac 30509245  T
Q  120 cccgacagtctagatttaatacgattcacaataggttcctagaaacgcaa-tcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacg 218  Q
    ||||||| ||||||||||||||||||||| | ||| ||| | ||||| || ||| || |||||||| |||||||||| ||| || ||||| |||||||      
T  30509244 cccgacaatctagatttaatacgattcacgacaggatccca-aaacgaaagtctccgcggattacccccaataggcaaacctagatacaaaaaaggaatc 30509146  T
Q  219 ttacctactttacaacttaacacagaagcagcctca 254  Q
    |||||||||||||| || ||||| ||||||||||||    
T  30509145 ttacctactttacagctcaacaccgaagcagcctca 30509110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 254
Target Start/End: Complemental strand, 30549687 - 30549453
Alignment:
Q  20 tggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaa 119  Q
    |||| |||| ||||||||||| ||||||||||||| ||| ||||  || | ||| ||||| | |||||||||||||||||| |||||||| ||||||||     
T  30549687 tggagctttaaagaaggaaagagcatagacaggcagagaagtcaacacggctttcagaaggatcaagcgaccaccaaaagagagaaaccggctattccac 30549588  T
Q  120 cccgacagtctagatttaatacgattcacaataggttcctagaaacgcaa-tcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacg 218  Q
    ||||||| ||||||||||||||||||||| | ||| ||| | ||||| || ||| || |||||||| |||||||||| ||| || ||||| |||||||      
T  30549587 cccgacaatctagatttaatacgattcacgacaggatccca-aaacgaaagtctccgcggattacccccaataggcaaacctagatacaaaaaaggaatc 30549489  T
Q  219 ttacctactttacaacttaacacagaagcagcctca 254  Q
    |||||||||||||| || ||||| ||||||||||||    
T  30549488 ttacctactttacagctcaacaccgaagcagcctca 30549453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 16 - 331
Target Start/End: Original strand, 6050055 - 6050370
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||||| |||||||||||||  |||||||| ||||| || | ||||||||   | |||||||||||||  || ||||||||    
T  6050055 ctgatggagctttgaagaaggaaagcgcatagacaggcagcgaggtcagaacagactttaaaagaaccagatggccaccaaaagataagaaacgactatt 6050154  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    |||||| || |  || | ||||||||||||||| ||||||||| | |||| ||| |  |||| ||| || || ||||||||||||| |||||| || |      
T  6050155 ccaaccagataaccttgctttaatacgattcacgataggttcccaaaaacacaaacgccgagaatttcccccgataggcatacccaagtacaaaaacgac 6050254  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaacaagcatactcttatgaaaattcactttc 314  Q
    || || || ||||| || ||||| ||||| || ||||||  ||||||||| || || |||||||| || | ||||| ||||||||||||||||||| |||    
T  6050255 accttgcccactttgcaccttaaaacagacgccgcctcacttaaccaagaagaagcgatattcacaccaaccaagc-tactcttatgaaaattcaccttc 6050353  T
Q  315 aaacccgacatagcctc 331  Q
    ||||| ||||| |||||    
T  6050354 aaacctgacatggcctc 6050370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 254
Target Start/End: Complemental strand, 35122013 - 35121775
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| |||| ||||||||||| ||||||||||||| ||| ||||  || ||||| || |||| ||||||||||||||| || ||||| || |||||    
T  35122013 ctgaaggagctttaaagaaggaaagagcatagacaggcagagaagtcaaaactgattttaggagaatcaagcgaccaccaaacgagagaaatcggctatt 35121914  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaa-tcttcgaggattaccaccaataggcatacccaggtacaagaaagg 214  Q
     || |||||||||||||||||||||| |||||||| ||| ||| | ||||  || ||| || |||||||| |||||||||| ||  |||||||| |||||    
T  35121913 gcatcccgacagtctagatttaatactattcacaacaggatccca-aaactaaagtctccgcggattacccccaataggcaaacataggtacaaaaaagg 35121815  T
Q  215 aacgttacctactttacaacttaacacagaagcagcctca 254  Q
    ||| ||||| ||||||||||||||||| || || ||||||    
T  35121814 aaccttacccactttacaacttaacactgaggccgcctca 35121775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 241
Target Start/End: Original strand, 38358286 - 38358508
Alignment:
Q  20 tggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaa-gatagaaaccgactattcca 118  Q
    |||| |||||||||| ||||| ||||||||||||| ||| ||||| || ||||| || |||  ||| |||||||||||| || ||||||| |||||||||    
T  38358286 tggagctttgaagaaagaaagagcatagacaggcagagatgtcagaactgattttaggagagtcaaacgaccaccaaaaagagagaaacctactattcca 38358385  T
Q  119 acccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacg 218  Q
    ||||||||||||||||||||| ||||| || || |||||| | ||  | | ||| || ||||||||||| ||||||| ||| |||||||| |||||||      
T  38358386 acccgacagtctagatttaatgcgattaacgatcggttcccaaaactgaagtctccgcggattaccacctataggcagacctaggtacaaaaaaggaatt 38358485  T
Q  219 ttacctactttacaacttaacac 241  Q
    ||||| ||||||||||| |||||    
T  38358486 ttacccactttacaactcaacac 38358508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 254
Target Start/End: Complemental strand, 10486227 - 10485989
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||| ||||  ||||||||||||| ||| |||| ||||||||| | ||||||||| || || ||||| || |||||||| |||||    
T  10486227 ctgatggagctttgaagaaagaaatggcatagacaggcagagaagtcaagacagattttaaaagaaccaaacgtcctccaaaggaaagaaaccggctatt 10486128  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    ||||||||  ||||||| ||| || |||| ||||||||| ||| | ||||  |  |  || |||||||| ||||||||||  |||| |||||||||||||    
T  10486127 ccaacccgtaagtctagctttgattcgatgcacaatagggtcccaaaaactaagacgacgcggattacccccaataggcaagcccaagtacaagaaagga 10486028  T
Q  216 acgttacctactttacaacttaacacagaagcagcctca 254  Q
    || ||||| ||||| || || ||||| ||||| ||||||    
T  10486027 accttacccactttgcagctcaacacggaagctgcctca 10485989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 207
Target Start/End: Complemental strand, 20208044 - 20207854
Alignment:
Q  17 tgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattc 116  Q
    ||||||| |||||||||||||||| ||||||||||||| |||||| |||||||| || | ||||||||  || || ||| |||||| ||| |||||||||    
T  20208044 tgatggagctttgaagaaggaaagcgcatagacaggcagagaggttaggacagactttaaaagaaccagacggccgccataagataaaaaacgactattc 20207945  T
Q  117 caacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtaca 207  Q
    ||||| ||||  |||| |||||| |||||||||||||||||| | |||  ||| |   ||| ||| || |||||||||||||||| |||||    
T  20207944 caaccagacaacctagttttaatgcgattcacaataggttcccaaaaattcaaacgctgagaatttcccccaataggcatacccaagtaca 20207854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 154
Target Start/End: Original strand, 31865124 - 31865250
Alignment:
Q  28 tgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacag 127  Q
    ||||||||||||  |||||||||| |||||||||||| | |||||| || ||||||||||| || |||||||| ||||| || || |||||||||||||     
T  31865124 tgaagaaggaaaaagcatagacagacaaagaggtcagaatagatttaagtagaaccaagcggcctccaaaagagagaaatcggcttttccaacccgacaa 31865223  T
Q  128 tctagatttaatacgattcacaatagg 154  Q
     ||||||||||||||||||||||||||    
T  31865224 cctagatttaatacgattcacaatagg 31865250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 42514544 - 42514677
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| || ||||||| ||| |||||||| |||||||| |||||||| | |||||| ||    
T  42514544 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgactttgccaaccaga 42514643  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  42514644 caatctagatttaatacgatccaccacaggttcc 42514677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 25 - 158
Target Start/End: Complemental strand, 30731630 - 30731497
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  |||||||| || || || |||| ||| |||||||| |||||||| |||||||| |||||||| ||    
T  30731630 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacggactttagtagaatcaaacgaccaccgaaagataggaaccgacttttccaaccaga 30731531  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  30731530 caatctagatttaatacgatccaccacaggttcc 30731497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 127 - 255
Target Start/End: Original strand, 25591265 - 25591393
Alignment:
Q  127 gtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgttacctac 226  Q
    ||||||||||||||| ||||||||| || |||||||||| |||||| ||||||||||||||||||||||  |||| |||||||||| |||| || || ||    
T  25591265 gtctagatttaatacaattcacaatgggatcctagaaacacaatctccgaggattaccaccaataggcaggcccaagtacaagaaatgaacctttcccac 25591364  T
Q  227 tttacaacttaacacagaagcagcctcat 255  Q
    ||||||| | | ||| || ||||||||||    
T  25591365 tttacaattcagcacggatgcagcctcat 25591393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 588325 - 588460
Alignment:
Q  19 atggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattcca 118  Q
    ||||| ||||||||||  |||| ||||||||||||| |||||||| ||||||||| ||||| |||||||| ||||| ||||| ||||| || ||||||||    
T  588325 atggagctttgaagaaacaaagagcatagacaggcagagaggtcaagacagattttagaagtaccaagcggccaccgaaagagagaaatcggctattcca 588424  T
Q  119 acccgacagtctagatttaatacgattcacaatagg 154  Q
    || ||  ||||||| || ||| ||||||||||||||    
T  588425 actcgtaagtctagcttgaattcgattcacaatagg 588460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 19506813 - 19506936
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||| ||||||||||| ||||||||| ||||||| ||||| || | ||| |  ||||| ||||||||||| || |||| |||||| |||||    
T  19506813 ctgatggagctttaaagaaggaaagagcatagacaagcaaagaagtcagaactgctttcaagagaactaagcgaccaccgaacgataaaaaccggctatt 19506912  T
Q  116 ccaacccgacagtctagatttaat 139  Q
    |||||| |||||||||||||||||    
T  19506913 ccaacctgacagtctagatttaat 19506936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 23239198 - 23239340
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||||||||||||| | ||  |||||||| || || ||||||| | | |||||||| ||||| || |||||||| |     
T  23239198 ctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatcgaacgaccaccgaaagaaaggaaccgactttg 23239297  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||| |||| |||||||||| |||||||||||| |||||||    
T  23239298 ccaaccagacaatctagatttagtacgattcacaacaggttcc 23239340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 28535001 - 28534859
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||||||||||||| | ||  |||||||| || || ||||||| ||| |||||||||||||| || |||||||| |     
T  28535001 ctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggacttaagaagaatcaaacgaccaccaaaagaaaggaaccgactttg 28534902  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    |||||| |||| ||||  |||||||||||| |||| |||||||    
T  28534901 ccaacctgacaatctatttttaatacgattaacaacaggttcc 28534859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 27796299 - 27796433
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||||||||||||| |  |  ||||||||  ||||||||||||  |  |||||||||||||| || ||||||||||     
T  27796299 ctgacggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacgaatttgagaagaattagacgaccaccaaaagaaaggaaccgactatg 27796398  T
Q  116 ccaacccgacagtctagatttaatacgattcacaa 150  Q
    |||||| |||| ||||| |||||||||||| ||||    
T  27796399 ccaaccagacaatctagttttaatacgattaacaa 27796433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 33385298 - 33385160
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||||||||||||| |  |  |||| ||||||||||||||| | ||||||||||||||| || ||  ||| |||||     
T  33385298 ctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagatttgagaagtatcaagcgaccaccaaaggaaaggtacctactatg 33385199  T
Q  116 ccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    |||||| |||| |||||| || |||||||| ||||||||    
T  33385198 ccaaccagacaatctagactttatacgattaacaatagg 33385160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 142
Target Start/End: Original strand, 36256601 - 36256716
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| |  | ||||| |||||| || | ||||| ||||||||| |||||||| ||||||||||| | |||||  ||||    
T  36256601 ttgaagaaggaaagagcatagacaggtagcgcggtcaagacagactttaaaagaatcaagcgacctccaaaagaaagaaaccgactttgccaactagaca 36256700  T
Q  127 gtctagatttaatacg 142  Q
    |||||||||| |||||    
T  36256701 gtctagattttatacg 36256716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 19838390 - 19838462
Alignment:
Q  26 tttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaa 98  Q
    |||||||||||||||  |||||||||||||||| ||||||||||| |||||||||| ||| ||||||| ||||    
T  19838390 tttgaagaaggaaagaacatagacaggcaaagaagtcaggacagacttgagaagaatcaaacgaccacaaaaa 19838462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 380716 - 380839
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||| | |||||||||||||||| ||||||||| ||| |||||||| |||| | || ||||||||||| || || | |||||| ||||| ||||| |     
T  380716 ctgatgaagctttgaagaaggaaagagcatagacatgcagagaggtcaagacaaactttagaagaaccaaccggcccctaaaagagagaaaacgactttg 380815  T
Q  116 ccaacccgacagtctagatttaat 139  Q
    ||| ||||||| |||||| |||||    
T  380816 ccaccccgacaatctagacttaat 380839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 25856764 - 25856626
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||||||||||||| |  |  || | |||||||||||| |||| ||||||||||||||| || ||  ||| |||||     
T  25856764 ctgacggagctttgaaaaaggaaagtgcatagacaggaatcgcagttaagacagatttgagcagaatcaagcgaccaccaaaggaaaggtacctactatg 25856665  T
Q  116 ccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    |||||| |||| |||||| || ||||| || ||||||||    
T  25856664 ccaaccagacaatctagactttatacgtttaacaatagg 25856626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 29572186 - 29572138
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagattt 73  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29572186 ctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagattt 29572138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 29573563 - 29573515
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagattt 73  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29573563 ctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagattt 29573515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 29574940 - 29574892
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagattt 73  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29574940 ctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagattt 29574892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 29576317 - 29576269
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagattt 73  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29576317 ctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagattt 29576269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 29577694 - 29577646
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagattt 73  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29577694 ctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagattt 29577646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 29579071 - 29579023
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagattt 73  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29579071 ctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagattt 29579023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 42260097 - 42260193
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgact 112  Q
    |||||||| |||||||||||||||| || |||||||| |  ||||||| |||||| |||||||||| ||| || || ||||| |||||||| |||||    
T  42260097 ctgatggagctttgaagaaggaaagagcgtagacaggaagcgaggtcaagacagacttgagaagaatcaaacggcctccaaatgatagaaagcgact 42260193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 33170473 - 33170596
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||| ||||||||||| |  |  ||||||||| |||||||||| | ||| ||  |||||||||| || ||||||||||     
T  33170473 ctgacggagctttgaaaaaggaaagagcatagacaggtagtgcagtcaggacaaatttgagaaggatcaaccggtcaccaaaagaaaggaaccgactatg 33170572  T
Q  116 ccaacccgacagtctagatttaat 139  Q
    |||||| |||| ||||| ||||||    
T  33170573 ccaaccagacaatctagctttaat 33170596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 4297623 - 4297509
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||||||||| | |||||||| || ||| || || ||||| || || |||||||| |||| ||||||||||||  || | ||||    
T  4297623 ttgaagaaggaaagagcatagacaggtagagaggtcaagatagactttaggagaactaaccggccaccaaacgataaaaaccgactattgaaatcagaca 4297524  T
Q  127 gtctagatttaatac 141  Q
     ||| ||||||||||    
T  4297523 atctcgatttaatac 4297509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 21084707 - 21084795
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||||||||| ||||||||||| | |||||||| |||||| || ||||| || || ||||||||||| |||| || || ||||||    
T  21084707 ttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttagaaggactaaccgaccaccaaatgataaaagccaactatt 21084795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 6886010 - 6886101
Alignment:
Q  48 acaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacagtctagatttaat 139  Q
    ||||||| ||| ||| | || ||||||||||||| |||||| ||||| ||||| | ||| | ||||||| ||||||| ||||||||||||||    
T  6886010 acaggcagagaagtcggaactgatttgagaagaatcaagcggccaccgaaagagataaatctactattctaacccgaaagtctagatttaat 6886101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 331
Target Start/End: Complemental strand, 7000115 - 6999973
Alignment:
Q  189 ataggcatacccaggtacaagaaaggaacgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaaca 287  Q
    ||||||||||| | |||||| || || || || || ||||| |||| ||| ||||| || ||||||  ||||||||| || ||||||||||| || | ||    
T  7000115 ataggcatacctaagtacaaaaacggcaccttgcccactttgcaacctaaaacagacgccgcctcacttaaccaagaggaagcaatattcacacccacca 7000016  T
Q  288 agcatactcttatgaaaattcactttcaaacccgacatagcctc 331  Q
    ||| ||||||||||||| ||||| |||||| | |||||||||||    
T  7000015 agc-tactcttatgaaatttcaccttcaaatcggacatagcctc 6999973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 35983107 - 35983036
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaa 96  Q
    ||||||| |||||||||||||||||||| | ||  ||||||||||| || ||||||| ||| ||||||||||    
T  35983107 ctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacagacttaagaagaatcaaacgaccaccaa 35983036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 17697458 - 17697501
Alignment:
Q  63 aggacagatttgagaagaaccaagcgaccaccaaaagatagaaa 106  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||    
T  17697458 aggacagatttcagaagaaccaagcgaccaccaagcgatagaaa 17697501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 293 - 328
Target Start/End: Original strand, 42514812 - 42514847
Alignment:
Q  293 actcttatgaaaattcactttcaaacccgacatagc 328  Q
    ||||||||||||||| ||||||||||||||||||||    
T  42514812 actcttatgaaaattaactttcaaacccgacatagc 42514847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 19853886 - 19853940
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaa 81  Q
    |||||||||||||| ||||||||||||  |||||| |||||| | ||||||||||    
T  19853886 ttgaagaaggaaagagcatagacaggctgagaggttaggacatagttgagaagaa 19853940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 8347 - 8532
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| || | ||||||||  |  || ||| |||||| ||| ||||||||    
T  8347 ctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcaggacagactttaaaagaaccagacagccgccataagataaaaaacgactatt 8446  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcataccca 201  Q
    |||||| ||||  |||| |||||| |||||||||||||||||| | |||| ||| |   ||| ||| || ||||||||||||||||    
T  8447 ccaaccagacaacctagttttaatgcgattcacaataggttcccaaaaactcaaacgctgagaatttcccccaataggcataccca 8532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 13281 - 13466
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||||||||| ||||||||||||| |||||| |||||| | || | ||||||||  |  || ||| |||||| ||| ||||||||    
T  13281 ctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtaaggacaaactttaaaagaaccagacagccgccataagataaaaaacgactatt 13380  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcataccca 201  Q
    |||||| ||||  |||| |||||| |||||||||||||||||| | |||| ||| |   ||| ||| || ||||||||||||||||    
T  13381 ccaaccagacaacctagttttaatgcgattcacaataggttcccaaaaactcaaacgctgagaatttcccccaataggcataccca 13466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 331
Target Start/End: Original strand, 182933 - 183245
Alignment:
Q  19 atggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattcca 118  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||| || || || |  ||||||| | | || |||||||||| ||| ||||| |||||    
T  182933 atggagctttgaagaaggaaagtgcatagacaggcagagaggtcagaaccgactttaacagaaccaggtggccgccaaaagataaaaaacgactgttcca 183032  T
Q  119 acccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacg 218  Q
    ||| ||||  |||| ||||||||||||||| ||||||||| | ||||  || |  |||| ||| || || |||||||| || | ||||||||| || |      
T  183033 accagacaacctagctttaatacgattcacgataggttcccaaaaacttaagcgccgagaatttcctccgataggcatgcctaagtacaagaatggcatc 183132  T
Q  219 ttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcac-cctaacaagcatactcttatgaaaattcactttcaaa 317  Q
    || || ||||| ||| | || || || || ||||||  ||||||||| |  || |||||||| || | ||||| ||||||||||||||||||| ||||||    
T  183133 ttgcccactttgcaattcaaaaccgacgccgcctcacttaaccaagaaggggcgatattcacaccaaccaagc-tactcttatgaaaattcaccttcaaa 183231  T
Q  318 cccgacatagcctc 331  Q
    || |||||||||||    
T  183232 ccagacatagcctc 183245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 158
Target Start/End: Complemental strand, 105159 - 105026
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||||||||||||||| | ||  ||||||||||| || ||||||| ||| |||||||| |||||||| |||||||| | |||||| ||    
T  105159 ctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgactttgccaaccaga 105060  T
Q  125 cagtctagatttaatacgattcacaataggttcc 158  Q
    || ||||||||||||||||| ||| | |||||||    
T  105059 caatctagatttaatacgatccaccacaggttcc 105026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 293 - 328
Target Start/End: Complemental strand, 104891 - 104856
Alignment:
Q  293 actcttatgaaaattcactttcaaacccgacatagc 328  Q
    ||||||||||||||| ||||||||||||||||||||    
T  104891 actcttatgaaaattaactttcaaacccgacatagc 104856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 254
Target Start/End: Complemental strand, 134158 - 133932
Alignment:
Q  28 tgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacag 127  Q
    ||||||| ||||| ||||||||||||| ||| |||| ||||||||| | ||| ||||| || |||||||| || |||||||| |||||||||||||  ||    
T  134158 tgaagaaagaaagggcatagacaggcagagaagtcaagacagattttaaaagtaccaaccgtccaccaaaggaaagaaaccggctattccaacccgtaag 134059  T
Q  128 tctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgttacctact 227  Q
    ||||||||| || |||| ||||||||| ||| | ||||  |  |  || |||||||| |||||||| |  |||| ||||||||||||| | ||||| |||    
T  134058 tctagattttattcgatgcacaatagggtcccaaaaactaagccgacgtggattacccccaataggtaagcccaagtacaagaaaggagccttacccact 133959  T
Q  228 ttacaacttaacacagaagcagcctca 254  Q
    || || || ||||| ||||| ||||||    
T  133958 ttgcagctcaacaccgaagctgcctca 133932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 254
Target Start/End: Complemental strand, 311986 - 311760
Alignment:
Q  28 tgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgacag 127  Q
    ||||||| ||||| ||||||||||||| ||| |||| ||||||||| | ||| ||||| || |||||||| || |||||||| |||||||||||||  ||    
T  311986 tgaagaaagaaagggcatagacaggcagagaagtcaagacagattttaaaagtaccaaccgtccaccaaaggaaagaaaccggctattccaacccgtaag 311887  T
Q  128 tctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaaggaacgttacctact 227  Q
    ||||||||| || |||| ||||||||| ||| | ||||  |  |  || |||||||| |||||||| |  |||| ||||||||||||| | ||||| |||    
T  311886 tctagattttattcgatgcacaatagggtcccaaaaactaagccgacgtggattacccccaataggtaagcccaagtacaagaaaggagccttacccact 311787  T
Q  228 ttacaacttaacacagaagcagcctca 254  Q
    || || || ||||| ||||| ||||||    
T  311786 ttgcagctcaacaccgaagctgcctca 311760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 16 - 328
Target Start/End: Complemental strand, 3873 - 3561
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||| ||||| ||||||||||||| ||| |||| ||||||||| | ||| |||||  | || ||||| || |||||||  |||||    
T  3873 ctgatggagctttgaagaaagaaagggcatagacaggcagagaagtcaagacagattttaaaagtaccaaatgtccgccaaaggaaagaaaccagctatt 3774  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcctagaaacgcaatcttcgaggattaccaccaataggcatacccaggtacaagaaagga 215  Q
    ||||||||  ||||||||||| || |||| ||||||| | ||| | ||||  |  |  || || ||||| ||||| ||||  |||| |||||||||||||    
T  3773 ccaacccgtaagtctagatttgattcgatgcacaatatggtcccaaaaactaagccgacgcgggttacccccaattggcaagcccaagtacaagaaagga 3674  T
Q  216 acgttacctactttacaacttaacacagaagcagcctcatgtaaccaagacgacgcaatattcaccctaacaagcatactcttatgaaaattcactttca 315  Q
    || ||||| ||||| ||||| || || ||||| ||||||   | ||||||   ||  ||||| | ||  || | || |||||||||||||||||||||||    
T  3673 accttacccactttgcaactcaaaaccgaagctgcctcacaaagccaagaatccgagatattaatccccaccaacaaactcttatgaaaattcactttca 3574  T
Q  316 aacccgacatagc 328  Q
    | || ||||||||    
T  3573 acccagacatagc 3561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 8419 - 8557
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||| |||||||||| ||||| ||||||||||| | ||| |||| ||||||||| |  |||||||| || || ||||| || |||||||| |||||    
T  8419 ctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacagattttaacagaaccaaacgtcctccaaaggaaagaaaccggctatt 8518  T
Q  116 ccaacccgacagtctagatttaatacgattcacaatagg 154  Q
    |||||||   ||||||| |||||| ||||||||||||||    
T  8519 ccaacccataagtctagctttaattcgattcacaatagg 8557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 150
Target Start/End: Original strand, 368 - 493
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    ||||||| |||||||| ||||||||||| |  |  || ||||| ||||||||||||| || |||||||||||| || || |||||||||| |||||| ||    
T  368 ctttgaaaaaggaaagagcatagacaggaagcgcagttaggacggatttgagaagaatcaggcgaccaccaaaggagaggaaccgactatgccaaccaga 467  T
Q  125 cagtctagatttaatacgattcacaa 150  Q
     | |||||||||||||||||| ||||    
T  468 aaatctagatttaatacgattaacaa 493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 4067 - 4209
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||| ||| ||||||| |||||||||||||||||||| | ||  |||||||| || || ||||||| ||| |||||||| || || || |||| ||| |     
T  4067 ctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatcaaacgaccaccgaaggaaaggaaccaactttg 4166  T
Q  116 ccaacccgacagtctagatttaatacgattcacaataggttcc 158  Q
    | |||| ||||  |||||||||||||| ||||||| |||||||    
T  4167 cgaaccagacaacctagatttaatacggttcacaacaggttcc 4209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 55491 - 55579
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||||||||| ||||||||||| | |||||||| || ||| || |||||||| || |  |||||||| |||| ||||||||||||    
T  55491 ttgaagaaggaaagagcatagacaggtagagaggtcaagatagactttagaagaactaacctgccaccaaacgataaaaaccgactatt 55579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 143142 - 143054
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||||||||| ||||||||||| | |||||||| || ||| || |||||||| || |  |||||||| |||| ||||||||||||    
T  143142 ttgaagaaggaaagagcatagacaggtagagaggtcaagatagactttagaagaactaacctgccaccaaacgataaaaaccgactatt 143054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 28600 - 28688
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactatt 115  Q
    |||||||||||||| ||||||||||| | |||||||| |||||| || |||||||| || |   ||||||| |||| ||||||||||||    
T  28600 ttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttagaagaactaacctgtcaccaaacgataaaaaccgactatt 28688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 6906 - 6971
Alignment:
Q  16 ctgatggaactttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaa 81  Q
    |||| ||| ||||||| |||||||| ||||||||||| |  ||||||| |||| ||||||||||||    
T  6906 ctgacggagctttgaaaaaggaaagagcatagacaggaagcgaggtcaagacatatttgagaagaa 6971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 140
Target Start/End: Complemental strand, 63614 - 63501
Alignment:
Q  27 ttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccgaca 126  Q
    |||||||||||||| ||||| ||||| |   |||||| ||||||||| ||||| ||||| |  || ||||||||||| || ||||| | ||| | |||||    
T  63614 ttgaagaaggaaagagcataaacaggaagcaaggtcaagacagattttagaaggaccaaccagcccccaaaagataggaagcgactctgccaccacgaca 63515  T
Q  127 gtctagatttaata 140  Q
     ||||| |||||||    
T  63514 ttctagttttaata 63501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 67904 - 68012
Alignment:
Q  25 ctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaaccgactattccaacccga 124  Q
    |||||||||||||||   |||||||| |||| || |||| |||  ||||  |||||  | ||||||| |||||||| ||||| ||||| |||||  ||||    
T  67904 ctttgaagaaggaaaaatcatagacatgcaatgatgtcaagacgtattttcgaagagtctagcgacccccaaaagaaagaaaacgacttttccacgccga 68003  T
Q  125 cagtctaga 133  Q
    |||||||||    
T  68004 cagtctaga 68012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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