View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13569_high_15 (Length: 308)
Name: NF13569_high_15
Description: NF13569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13569_high_15 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 7 - 308
Target Start/End: Complemental strand, 9112535 - 9112230
Alignment:
| Q |
7 |
gaagcaaaggaaggaacaagggactatttcaagggcagcaacaccaccacctcctcctccgcttccaaaattcagaatcatctcgaagccaagagcagaa |
106 |
Q |
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| T |
9112535 |
gaagcaaaggaaggaacaagggactatttcaagggcagcaacaccaccaccacctcctccgcttccaaaattccgaatcatctcgaagccaagagcagaa |
9112436 |
T |
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| Q |
107 |
gagagtgtgacaaaacgcgaaattgccaagttttggaggcaaaagcgaattgtggaagaggatcatctccttgctgctatcaaggctgcggcaagactcc |
206 |
Q |
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| T |
9112435 |
gagagcgtgacaaaacgcgaaattgccaagttttggaggcaaaagcgaattgtggaagaggatcatctccttgctgctatcaaggctgcggcaagactcc |
9112336 |
T |
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| Q |
207 |
gtgcgcgcaacctcacggtaagtgccatatagtttgcatcctctgcagcagctatcaagaattcaaattatatgta----tataattcaagtatatggta |
302 |
Q |
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| T |
9112335 |
gtgcgcgcaatctcacggtaagtgccatatagtttgcatcctctgcagcagctatcaagaattcaaattatatgtatatatataattcaagtatatggta |
9112236 |
T |
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| Q |
303 |
catatg |
308 |
Q |
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| T |
9112235 |
catatg |
9112230 |
T |
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