View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1356_high_16 (Length: 289)
Name: NF1356_high_16
Description: NF1356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1356_high_16 |
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Alignment Details
Target: chr3 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 49 - 228
Target Start/End: Original strand, 38918871 - 38919050
Alignment:
| Q |
49 |
tcatcaaaccttcttctccaactccatcccatcttcgccattaccaactctcctttctcgaccaaatcgcacctatggtttataaccctatcgtcctctt |
148 |
Q |
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| T |
38918871 |
tcatcaaaccttcttctccaactccatcccatcttcgccattaccaactctcctttctcgaccaaatcgcgcctatggtttataaccctatcgtcctctt |
38918970 |
T |
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| Q |
149 |
ctactctcacaacgacgcactcaacacaaccaccatatccaacactctcaaaaaatccctatcaaaaatcttaactcatt |
228 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38918971 |
ctactctcacaacgacgcactcaacacagccaccatatccaacactctcaaaaaatccctatcaaaaatcttaactcatt |
38919050 |
T |
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