View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1356_high_22 (Length: 254)
Name: NF1356_high_22
Description: NF1356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1356_high_22 |
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Alignment Details
Target: chr5 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 41798163 - 41798284
Alignment:
| Q |
11 |
cgaagaatatgatatatgtgtttgtcttg---gataagttcatatatgtgtgtatttactaagcaggtaacataatccaaagattttgaactgtccacga |
107 |
Q |
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|||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
41798163 |
cgaataatatgatatatatgtttgtcttgttggataagttcatatatgtgtgtatttactaagcaggtaagataatccaaagattttgaactgtccacga |
41798262 |
T |
|
| Q |
108 |
gtatatcatcgtatctatgata |
129 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
41798263 |
gtatatcatcgtatctatgata |
41798284 |
T |
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