View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1356_low_2 (Length: 537)

Name: NF1356_low_2
Description: NF1356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1356_low_2
NF1356_low_2
[»] chr4 (13 HSPs)
chr4 (259-512)||(42468547-42468801)
chr4 (259-512)||(42470876-42471130)
chr4 (285-534)||(50855847-50856097)
chr4 (262-512)||(45162004-45162255)
chr4 (262-512)||(45166896-45167147)
chr4 (363-510)||(19429187-19429334)
chr4 (285-510)||(8739240-8739467)
chr4 (436-512)||(13774151-13774227)
chr4 (436-499)||(13776449-13776512)
chr4 (259-314)||(45161971-45162026)
chr4 (259-314)||(45166863-45166918)
chr4 (373-498)||(43179576-43179710)
chr4 (259-289)||(50856063-50856093)
[»] chr8 (9 HSPs)
chr8 (259-512)||(4876814-4877068)
chr8 (259-512)||(4879142-4879396)
chr8 (256-512)||(24519262-24519519)
chr8 (266-500)||(36379587-36379822)
chr8 (266-512)||(36377289-36377537)
chr8 (265-510)||(21268240-21268485)
chr8 (258-331)||(21268478-21268552)
chr8 (285-331)||(36379816-36379863)
chr8 (285-331)||(36377531-36377578)
[»] chr5 (14 HSPs)
chr5 (266-534)||(37207701-37207970)
chr5 (266-534)||(11849993-11850262)
chr5 (266-534)||(22600741-22601010)
chr5 (266-512)||(23164348-23164595)
chr5 (275-534)||(11852251-11852511)
chr5 (373-534)||(37215400-37215561)
chr5 (257-512)||(1779316-1779589)
chr5 (259-331)||(37207634-37207707)
chr5 (285-331)||(23164589-23164636)
chr5 (436-492)||(21743622-21743678)
chr5 (285-331)||(11850256-11850303)
chr5 (470-510)||(1779181-1779221)
chr5 (285-331)||(11852514-11852561)
chr5 (285-331)||(22600700-22600747)
[»] chr7 (25 HSPs)
chr7 (259-525)||(3932537-3932804)
chr7 (259-525)||(3934776-3935043)
chr7 (259-512)||(8733605-8733856)
chr7 (295-512)||(19786621-19786839)
chr7 (295-512)||(19788927-19789145)
chr7 (265-512)||(36464331-36464579)
chr7 (326-512)||(3052094-3052280)
chr7 (265-512)||(8414599-8414846)
chr7 (259-534)||(42678647-42678940)
chr7 (436-510)||(28610350-28610424)
chr7 (436-500)||(8731295-8731359)
chr7 (259-334)||(3932507-3932583)
chr7 (259-334)||(3934746-3934822)
chr7 (259-314)||(16497175-16497230)
chr7 (388-438)||(19094042-19094092)
chr7 (459-500)||(18395337-18395378)
chr7 (259-307)||(16497152-16497200)
chr7 (259-350)||(16535260-16535352)
chr7 (259-350)||(16630310-16630402)
chr7 (259-314)||(16535327-16535382)
chr7 (259-314)||(16630280-16630335)
chr7 (259-350)||(16497078-16497170)
chr7 (285-331)||(8414839-8414886)
chr7 (467-534)||(21769153-21769220)
chr7 (292-331)||(3051995-3052035)
[»] chr1 (13 HSPs)
chr1 (265-512)||(29833183-29833431)
chr1 (265-534)||(2403912-2404183)
chr1 (266-512)||(734686-734933)
chr1 (420-529)||(29833856-29833965)
chr1 (433-534)||(2410034-2410136)
chr1 (259-534)||(8933625-8933919)
chr1 (436-500)||(10909108-10909172)
chr1 (436-500)||(10911352-10911416)
chr1 (436-500)||(13011698-13011762)
chr1 (359-512)||(18353733-18353888)
chr1 (285-331)||(734927-734974)
chr1 (285-331)||(29833424-29833471)
chr1 (264-309)||(419221-419266)
[»] chr2 (12 HSPs)
chr2 (266-512)||(31486712-31486960)
chr2 (266-512)||(31488996-31489244)
chr2 (380-530)||(29801924-29802075)
chr2 (360-510)||(34576700-34576860)
chr2 (373-510)||(23859931-23860077)
chr2 (436-500)||(42275675-42275739)
chr2 (436-500)||(42277901-42277965)
chr2 (285-331)||(31486671-31486718)
chr2 (285-331)||(31488955-31489002)
chr2 (259-314)||(34576920-34576975)
chr2 (380-438)||(8995229-8995287)
chr2 (471-512)||(8995169-8995210)
[»] scaffold0599 (1 HSPs)
scaffold0599 (399-512)||(1579-1692)
[»] scaffold0050 (2 HSPs)
scaffold0050 (357-537)||(29261-29441)
scaffold0050 (357-500)||(31574-31718)
[»] chr3 (6 HSPs)
chr3 (357-510)||(18966221-18966374)
chr3 (436-512)||(4530835-4530911)
chr3 (442-512)||(4533138-4533208)
chr3 (105-256)||(42431530-42431681)
chr3 (361-436)||(1701104-1701179)
chr3 (379-435)||(8535522-8535578)
[»] scaffold0008 (1 HSPs)
scaffold0008 (259-314)||(73069-73124)
[»] chr6 (3 HSPs)
chr6 (285-500)||(21199137-21199372)
chr6 (470-534)||(20642221-20642285)
chr6 (259-289)||(21199141-21199171)
[»] scaffold0312 (1 HSPs)
scaffold0312 (264-309)||(11305-11350)


Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-115; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 259 - 512
Target Start/End: Complemental strand, 42468801 - 42468547
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| | ||| ||||||| ||||||| ||    
T  42468801 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctagaatactggggaataataaggaagctactagatactactaaat 42468702  T
Q  358 aagcactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttg 457  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  42468701 aagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagttt 42468602  T
Q  458 gtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42468601 gtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttg 42468547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 259 - 512
Target Start/End: Complemental strand, 42471130 - 42470876
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| | ||| ||||||| ||||||| ||    
T  42471130 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctagaatacttgggaataataaggaagctactagatactactaaat 42471031  T
Q  358 aagcactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttg 457  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  42471030 aagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagttt 42470931  T
Q  458 gtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42470930 gtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttg 42470876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 285 - 534
Target Start/End: Complemental strand, 50856097 - 50855847
Alignment:
Q  285 agaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagataagcactagggaagacttaacttttc 383  Q
    |||||| |||||||||||||||||| |||| |||||||| ||||||||| | ||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  50856097 agaatgatgaagaataatatggaagtctctagaatactatggaataataaggaagctactagacactactaaataagcactagggaagtcttaacttttc 50855998  T
Q  384 tagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatggagagccttcctagagtagt 483  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50855997 tagatccttctaggcttatgtaccagagtatccatatctctagacttttctttgtttctagatatttctagttggtaatggagagccttcctagagtagt 50855898  T
Q  484 ataaataaggctcaccatctagtgttttgcatcatcaagcattgaagcatt 534  Q
    |||||||||| |||||| ||||||||||| |||||||||||||||| ||||    
T  50855897 ataaataaggttcaccacctagtgttttggatcatcaagcattgaatcatt 50855847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 262 - 512
Target Start/End: Original strand, 45162004 - 45162255
Alignment:
Q  262 tgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagataag 360  Q
    |||||||||||||||||||||||||||   | ||||||||||| |||| || | |||||||||||||||||| ||||| ||||||||||||||| |||||    
T  45162004 tgaagaataatatggaagtctctagaagactaaagaataatatagaagtctttagaatactagggaataataagaaagctactagacactactaaataag 45162103  T
Q  361 cactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggta 460  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  45162104 cactagggaagtctttacttttctagatccttctaggtttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttgta 45162203  T
Q  461 atggagagccttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
    |||||||| ||||||||| ||||||||||||||||||||| |||||||||||    
T  45162204 atggagagtcttcctagaatagtataaataaggctcaccacctagtgttttg 45162255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 262 - 512
Target Start/End: Original strand, 45166896 - 45167147
Alignment:
Q  262 tgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagataag 360  Q
    |||||||||||||||||||||||||||   | ||||||||||| |||| || | |||||||||||||||||| | ||| ||||||||||||||| |||||    
T  45166896 tgaagaataatatggaagtctctagaagactaaagaataatatagaagtctttagaatactagggaataataaggaagctactagacactactaaataag 45166995  T
Q  361 cactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggta 460  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  45166996 cactagggaagtctttacttttctagatccttctaggtttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttgta 45167095  T
Q  461 atggagagccttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
    |||||||| ||||||||| ||||||||||||||||||||| |||||||||||    
T  45167096 atggagagtcttcctagaatagtataaataaggctcaccacctagtgttttg 45167147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 363 - 510
Target Start/End: Complemental strand, 19429334 - 19429187
Alignment:
Q  363 ctagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaat 462  Q
    ||||||||| ||| ||||||||||||||||||||  |||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||| |||||    
T  19429334 ctagggaagtcttgacttttctagatccttctagttttatgtactagagtattcatatctctagacttttctttgtttatagatatttctagtttgtaat 19429235  T
Q  463 ggagagccttcctagagtagtataaataaggctcaccatctagtgttt 510  Q
    ||||||||| |||||||||||||||||||||||||||| | |||||||    
T  19429234 ggagagcctacctagagtagtataaataaggctcaccaccaagtgttt 19429187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 285 - 510
Target Start/End: Original strand, 8739240 - 8739467
Alignment:
Q  285 agaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactaga--taagcactagggaagacttaacttt 381  Q
    |||||| ||||||||||| |||| | |||| ||||||||  |||||||| | ||| ||||| |||| |||| |  || |||||||||||  |||||  ||    
T  8739240 agaatgatgaagaataatgtggatgtctctagaatactaatgaataataaggaagctactatacac-actaaaattatgcactagggaaatcttaatgtt 8739338  T
Q  382 tctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatggagagccttcctagagta 481  Q
    ||||||||||||||| | |||| ||||||| |||||| |||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||     
T  8739339 tctagatccttctagtcatatgaactagagcatccatatctctagatttttctttgtttctagatatttctagtttgtaatgtagagccttcctagagtt 8739438  T
Q  482 gtataaataaggctcaccatctagtgttt 510  Q
    ||||||| |||||| |||| | |||||||    
T  8739439 gtataaacaaggcttaccaccaagtgttt 8739467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 436 - 512
Target Start/End: Original strand, 13774151 - 13774227
Alignment:
Q  436 tgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  13774151 tgtttctagatatttctagtttgtaatgtagagccttcctagagtagtataaataaggctcaccacctagtgttttg 13774227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 499
Target Start/End: Original strand, 13776449 - 13776512
Alignment:
Q  436 tgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcacc 499  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  13776449 tgtttctagatatttctagtttgtaatgcagagccttcctagagtagtataaataaggctcacc 13776512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 314
Target Start/End: Original strand, 45161971 - 45162026
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45161971 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagtctct 45162026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 314
Target Start/End: Original strand, 45166863 - 45166918
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45166863 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagtctct 45166918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 373 - 498
Target Start/End: Original strand, 43179576 - 43179710
Alignment:
Q  373 cttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctt---------tgtttctagatatttctagttggtaatg 463  Q
    |||||||||| | ||||||||||| | |||| ||||||||||||||||||||| |||||||||         ||||| ||||||||||||||| ||||||    
T  43179576 cttaacttttttggatccttctagtcatatgaactagagtatccatgtctctatacttttctttgtaatcaatgtttgtagatatttctagtttgtaatg 43179675  T
Q  464 gagagccttcctagagtagtataaataaggctcac 498  Q
     ||||  || |||||||||||||||| ||||||||    
T  43179676 cagagtttttctagagtagtataaattaggctcac 43179710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 289
Target Start/End: Complemental strand, 50856093 - 50856063
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaat 289  Q
    |||||||||||||||||||||||||||||||    
T  50856093 tgatgaagaataatatggaagtctctagaat 50856063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 259 - 512
Target Start/End: Original strand, 4876814 - 4877068
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| | ||| ||||||| ||||||| ||    
T  4876814 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctagaatactggggaataataaggaagctactagaaactactaaat 4876913  T
Q  358 aagcactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttg 457  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||     
T  4876914 aagcactagggaagtcttaacttttctagatccttctaggcttatgtactatagtatccatatctctagacttttctttgtttctagatatttctagttt 4877013  T
Q  458 gtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4877014 gtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttg 4877068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 259 - 512
Target Start/End: Original strand, 4879142 - 4879396
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagat 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| | ||| ||||||| ||||||| ||    
T  4879142 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctagaatactggggaataataaggaagctactagaaactactaaat 4879241  T
Q  358 aagcactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttg 457  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||     
T  4879242 aagcactagggaagtcttaacttttctagatccttctaggcttatgtactatagtatccatatctctagacttttctttgtttctagatatttctagttt 4879341  T
Q  458 gtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4879342 gtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttg 4879396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 256 - 512
Target Start/End: Complemental strand, 24519519 - 24519262
Alignment:
Q  256 acctgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactacta 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| | ||| ||| ||| |||||||    
T  24519519 acctgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctagaatactggggaataataaggaagctaccagatactacta 24519420  T
Q  355 gataagcactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctag 454  Q
     |||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||    
T  24519419 aataagcactagggaagtcttaacttttctagatccttctaggcttatgtacaaaagtatccatatctctagacttttctttgtttctagatatttctag 24519320  T
Q  455 ttggtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24519319 tttataatggagagccttcctagagtagtataaataaggctcaccatctagtgttttg 24519262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 266 - 500
Target Start/End: Complemental strand, 36379822 - 36379587
Alignment:
Q  266 gaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagataagcact 364  Q
    ||||||| |||||||||||||||   | ||||||||||| |||| |||| |||||||||||||||||| | ||| ||||||||||||||| |||||||||    
T  36379822 gaataatgtggaagtctctagaagactaaagaataatatagaagtctctagaatactagggaataataaggaagctactagacactactaaataagcact 36379723  T
Q  365 agggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatgg 464  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||| |||||||    
T  36379722 agggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctctggacttttctttgtttccagatatttctagtttgtaatgg 36379623  T
Q  465 agagccttcctagagtagtataaataaggctcacca 500  Q
    ||||||||||||||||||||||||||||||||||||    
T  36379622 agagccttcctagagtagtataaataaggctcacca 36379587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 266 - 512
Target Start/End: Complemental strand, 36377537 - 36377289
Alignment:
Q  266 gaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagataagcact 364  Q
    ||||||| |||||||||||||||   | ||||||||||| |||| |||| |||||||||||||||||| | ||| ||||||||||||||| |||||||||    
T  36377537 gaataatgtggaagtctctagaagactaaagaataatatagaagtctctagaatactagggaataataaggaagctactagacactactaaataagcact 36377438  T
Q  365 agggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatgg 464  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||  ||||||||||| || |||||||    
T  36377437 agggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctctgaacttttctttgttttcagatatttctactttgtaatgg 36377338  T
Q  465 agagccttcctagagtagtataaataaggctcaccatct-agtgttttg 512  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||    
T  36377337 agagccttcctagagtagtataaataaggctcaccacctaagtgttttg 36377289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 265 - 510
Target Start/End: Complemental strand, 21268485 - 21268240
Alignment:
Q  265 agaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagataagcac 363  Q
    |||||||| |||||||||||||||   | ||||||||||| |||| |||| |||||||||||||||||| | ||| ||||||||||||||| ||||  ||    
T  21268485 agaataatgtggaagtctctagaacactaaagaataatatagaagtctctagaatactagggaataataaggaagctactagacactactaaataaa-ac 21268387  T
Q  364 tagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatg 463  Q
    |||||||| ||| ||||||||||||||||||||  |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  21268386 tagggaagtcttgacttttctagatccttctagttttatgtactaaagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatg 21268287  T
Q  464 gagagccttcctagagtagtataaataaggctcaccatctagtgttt 510  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||    
T  21268286 gagagccttcctagagtagtataaataaggctcactacctagtgttt 21268240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 21268552 - 21268478
Alignment:
Q  258 ctgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataat 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  21268552 ctgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctagaatactagagaataat 21268478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 36379863 - 36379816
Alignment:
Q  285 agaatggtgaagaataatatggaagactct-gaatactagggaataat 331  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  36379863 agaatggtgaagaataatatggaagactctagaatactagggaataat 36379816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 36377578 - 36377531
Alignment:
Q  285 agaatggtgaagaataatatggaagactct-gaatactagggaataat 331  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  36377578 agaatggtgaagaataatatggaagactctagaatactaaggaataat 36377531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 206; Significance: 1e-112; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 266 - 534
Target Start/End: Original strand, 37207701 - 37207970
Alignment:
Q  266 gaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagataagcact 364  Q
    ||||||| |||||||||||||||   | ||||||||||| |||| || | |||||||||||||||||| | ||| ||||||||||||||| |||||||||    
T  37207701 gaataatgtggaagtctctagaagactaaagaataatatagaagtctgtagaatactagggaataataaggaagctactagacactactaaataagcact 37207800  T
Q  365 agggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatgg 464  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37207801 agggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatgg 37207900  T
Q  465 agagccttcctagagtagtataaataaggctcaccatctagtgttttgcatcatcaagcattgaagcatt 534  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37207901 agagccttcctagagtagtataaataaggctcaccacctagtgttttgcatcatcaagcattgaagcatt 37207970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 266 - 534
Target Start/End: Complemental strand, 11850262 - 11849993
Alignment:
Q  266 gaataatatggaagtctctagaatggtgaagaataatatggaagactctgaa-tactagggaataatatgaaagttactagacactactagataagcact 364  Q
    ||||||| |||||||||||||||   | ||||||||||| |||| |||| || ||||||||||||||| ||||| ||||||||||||||| |||||||||    
T  11850262 gaataatgtggaagtctctagaagactaaagaataatatagaagtctctaaaatactagggaataataagaaagctactagacactactaaataagcact 11850163  T
Q  365 agggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatgg 464  Q
    ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11850162 agggaagtcttaaattttctagatccttctaggcttatgtacaagagtatccatatctctagacttttctttgtttctagatatttctagttggtaatgg 11850063  T
Q  465 agagccttcctagagtagtataaataaggctcaccatctagtgttttgcatcatcaagcattgaagcatt 534  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  11850062 agagccttcctagagtagtataaataaggctcaccacctagtgttttggatcatcaagcattgaatcatt 11849993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 266 - 534
Target Start/End: Original strand, 22600741 - 22601010
Alignment:
Q  266 gaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagataagcact 364  Q
    ||||||| |||||||||||||||   | || |||||||| |||| |||| |||||||| ||||||||| ||||| |||| |||||||||| |||||||||    
T  22600741 gaataatgtggaagtctctagaagactaaataataatatagaagtctctagaatactatggaataataagaaagctacttgacactactaaataagcact 22600840  T
Q  365 agggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatgg 464  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22600841 agggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagttggtaatgg 22600940  T
Q  465 agagccttcctagagtagtataaataaggctcaccatctagtgttttgcatcatcaagcattgaagcatt 534  Q
    |||| ||| ||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  22600941 agagtcttgctaaagtagtataaataaggctcaccacctagtgttttggatcatcaagcattgaagcatt 22601010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 266 - 512
Target Start/End: Complemental strand, 23164595 - 23164348
Alignment:
Q  266 gaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagataagcact 364  Q
    ||||||| |||||||||||||||   | ||||||||||| |||| |||| |||||||||||||||||| | ||| ||||||||||||||| |||| ||||    
T  23164595 gaataatgtggaagtctctagaagactaaagaataatatagaagtctctagaatactagggaataataaggaagctactagacactactaaataaacact 23164496  T
Q  365 agggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatgg 464  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23164495 agggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagttggtaatgg 23164396  T
Q  465 agagccttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  23164395 agagccttcctagagtagtataaataaggcccaccacctagtgttttg 23164348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 275 - 534
Target Start/End: Complemental strand, 11852511 - 11852251
Alignment:
Q  275 ggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagataagcactagggaagac 373  Q
    ||||||||||||||   | ||||||||||| |||| |||| |||||||||||||||||| | ||| ||||||||||||||| |||||||||||||||| |    
T  11852511 ggaagtctctagaagactaaagaataatatagaagtctctagaatactagggaataataaggaagctactagacactactaaataagcactagggaagtc 11852412  T
Q  374 ttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatggagagccttc 473  Q
     ||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11852411 ataacttttctaggaccttctaggcttatgtactagagtatccatatctctagacttttatttgtttctagatatttctagttggtaatggagagccttc 11852312  T
Q  474 ctagagtagtataaataaggctcaccatctagtgttttgcatcatcaagcattgaagcatt 534  Q
    ||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||    
T  11852311 ctagagtagtataaataaggctcaccacctagtgttttggatcgtcaagcattgaatcatt 11852251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 373 - 534
Target Start/End: Original strand, 37215400 - 37215561
Alignment:
Q  373 cttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatggagagcctt 472  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  37215400 cttaacttttctagatccttctaggcttatatactagagtatccatgtctctaaacttttctttgtttctagatatttctagttggtaatgaagagcctt 37215499  T
Q  473 cctagagtagtataaataaggctcaccatctagtgttttgcatcatcaagcattgaagcatt 534  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  37215500 cctagagtagtataaataaggctcaccacatagtgttttgcatcatcaagcattgaagcatt 37215561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 257 - 512
Target Start/End: Complemental strand, 1779589 - 1779316
Alignment:
Q  257 cctgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctgaa-tactagggaataatatgaaagttactagacact--act 353  Q
    ||||| |||||||||||||||||| |||||||   | ||||||||||| |||| |||| || ||||| ||||||||| | ||| |||||||||||  |||    
T  1779589 cctgaggaagaataatatggaagtttctagaaaactaaagaataatatagaagtctctaaaatactatggaataataaggaagctactagacactccact 1779490  T
Q  354 agataa------gcactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgt--------- 438  Q
    | ||||      |||||||  ||  |||||  ||||||||||||||||| | |||| |||||||||||||||| ||||| | |||||||||             
T  1779489 aaataaaataaagcactagaaaaatcttaatgtttctagatccttctagtcatatgaactagagtatccatgtttctaggcctttctttgtaatcaatgt 1779390  T
Q  439 ttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
    ||||||||| |||||||| |||||| |||||||||||||||| ||||||||||||||||||| | |||||||||    
T  1779389 ttctagataattctagtttgtaatgtagagccttcctagagtggtataaataaggctcaccaacaagtgttttg 1779316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 259 - 331
Target Start/End: Original strand, 37207634 - 37207707
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataat 331  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  37207634 tgatgaagaataatatggaagtctctagaatgatgaagaataatatggaagactctagaatactagggaataat 37207707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 23164636 - 23164589
Alignment:
Q  285 agaatggtgaagaataatatggaagactct-gaatactagggaataat 331  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  23164636 agaatggtgaagaataatatggaagactctagaatactagggaataat 23164589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 436 - 492
Target Start/End: Original strand, 21743622 - 21743678
Alignment:
Q  436 tgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataag 492  Q
    ||||| ||||||||| ||||| ||| || ||||||||||||||||||||||||||||    
T  21743622 tgtttttagatatttttagtttgtagtgtagagccttcctagagtagtataaataag 21743678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 11850303 - 11850256
Alignment:
Q  285 agaatggtgaagaataatatggaagactc-tgaatactagggaataat 331  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  11850303 agaatggtgaagaataatatggaagactcttgaatactatggaataat 11850256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 510
Target Start/End: Complemental strand, 1779221 - 1779181
Alignment:
Q  470 cttcctagagtagtataaataaggctcaccatctagtgttt 510  Q
    ||||||||||||||||||||||||||||||| | |||||||    
T  1779221 cttcctagagtagtataaataaggctcaccaccaagtgttt 1779181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 11852561 - 11852514
Alignment:
Q  285 agaatggtgaagaataatatggaagactct-gaatactagggaataat 331  Q
    |||||||||||||||||||||||||||||| |||||||| | ||||||    
T  11852561 agaatggtgaagaataatatggaagactctagaatactatgaaataat 11852514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 22600700 - 22600747
Alignment:
Q  285 agaatggtgaagaataatatggaagactct-gaatactagggaataat 331  Q
    |||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  22600700 agaatgatgaagaataatatggaagactctagaatattagggaataat 22600747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 196; Significance: 1e-106; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 259 - 525
Target Start/End: Original strand, 3932537 - 3932804
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagat 357  Q
    ||||||||||||||||||||||||||||||   | ||||||||||||||||||||| |||||||||||||||||| | ||| ||||||| ||||||| ||    
T  3932537 tgatgaagaataatatggaagtctctagaagactaaagaataatatggaagactctagaatactagggaataataaggaagctactagatactactaaat 3932636  T
Q  358 aagcactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttg 457  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  3932637 aagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagttt 3932736  T
Q  458 gtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttgcatcatcaagcat 525  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||  ||||||||    
T  3932737 gtaatggagagccttcctagaatagtataaataaggctcaccatctagtgttttggatactcaagcat 3932804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 259 - 525
Target Start/End: Original strand, 3934776 - 3935043
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagat 357  Q
    ||||||||||||||||||||||||||||||   | ||||||||||||||||||||| |||||||||||||||||| | ||| ||||||| ||||||| ||    
T  3934776 tgatgaagaataatatggaagtctctagaagactaaagaataatatggaagactctagaatactagggaataataaggaagctactagatactactaaat 3934875  T
Q  358 aagcactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttg 457  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  3934876 aagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagttt 3934975  T
Q  458 gtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttgcatcatcaagcat 525  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||  ||||||||    
T  3934976 gtaatggagagccttcctagaatagtataaataaggctcaccatctagtgttttggatactcaagcat 3935043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 259 - 512
Target Start/End: Complemental strand, 8733856 - 8733605
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagat 357  Q
    ||||||||||||||||||||||||||||||   | ||||||||||| |||| |||| |||||||||||||||||| | ||| ||||||||||||||| ||    
T  8733856 tgatgaagaataatatggaagtctctagaacactaaagaataatatagaagtctctagaatactagggaataataaggaagctactagacactactaaat 8733757  T
Q  358 aagcactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttg 457  Q
    |||||||||||    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  8733756 aagcactagggt---cttaacttttctagatccttctaggcttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagttt 8733660  T
Q  458 gtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8733659 gtaaaggagagccttcctagagtagtataaataaggctcaccacctagtgttttg 8733605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 295 - 512
Target Start/End: Original strand, 19786621 - 19786839
Alignment:
Q  295 agaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagataagcactagggaagacttaacttttctagatccttc 393  Q
    |||||||| |||||| |||| ||||| |||||||||||| | ||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  19786621 agaataatgtggaagtctctagaatattagggaataataaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttc 19786720  T
Q  394 taggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataagg 493  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19786721 taggcttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatggagagccttcctagagtagtataaataagg 19786820  T
Q  494 ctcaccatctagtgttttg 512  Q
    ||||||| |||||||||||    
T  19786821 ctcaccacctagtgttttg 19786839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 295 - 512
Target Start/End: Original strand, 19788927 - 19789145
Alignment:
Q  295 agaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagataagcactagggaagacttaacttttctagatccttc 393  Q
    |||||||| |||||| |||| |||||||||||||||||| | ||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  19788927 agaataatgtggaagtctctagaatactagggaataataaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttc 19789026  T
Q  394 taggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataagg 493  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  19789027 taggcttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatggagagccttactagagtagtataaataagg 19789126  T
Q  494 ctcaccatctagtgttttg 512  Q
    ||||||| |||||||||||    
T  19789127 ctcaccacctagtgttttg 19789145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 265 - 512
Target Start/End: Complemental strand, 36464579 - 36464331
Alignment:
Q  265 agaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagataagcac 363  Q
    |||||||| |||||||||||||||   | || |||||||| |||| |||| |||||||||||||||||| | ||| ||||||||||||||| ||||||||    
T  36464579 agaataatgtggaagtctctagaacactaaataataatatagaagtctctagaatactagggaataataaggaagctactagacactactaaataagcac 36464480  T
Q  364 tagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatg 463  Q
    |||||||| ||| ||||||||||||||||||||  |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||  |||||    
T  36464479 tagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctccagacttttctttgtttctagatatttctagtttataatg 36464380  T
Q  464 gagagccttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36464379 gagagccttcctagagtagtataaataaggctcaccacctagtgttttg 36464331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 326 - 512
Target Start/End: Original strand, 3052094 - 3052280
Alignment:
Q  326 aataatatgaaagttactagacactactagataagcactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctcta 425  Q
    ||||||| | ||| ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||  |||||||||||| ||||||| ||||||    
T  3052094 aataataaggaagctactagacactactaaataagcattagggaagtcttaacttttctagatccttctagttttatgtactagaatatccatatctcta 3052193  T
Q  426 gacttttctttgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3052194 gacttttctttgtttctagatatttctagtttgtaatggagagccttcctagagtagtataaataaggctcaccacctagtgttttg 3052280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 265 - 512
Target Start/End: Complemental strand, 8414846 - 8414599
Alignment:
Q  265 agaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagataagcac 363  Q
    |||||||| ||||||| |||||||   | ||||||||||| |||| |||| |||||||||||||||||| | ||  ||||||||||||||| ||||||||    
T  8414846 agaataatgtggaagtatctagaacactaaagaataatatagaagtctctagaatactagggaataataaggaaactactagacactactaaataagcac 8414747  T
Q  364 tagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatg 463  Q
    |||||||| ||| ||||||||||||| ||||||  |||| ||||| | ||||||| ||||||||||||||||||||||||||| ||||||||| ||||||    
T  8414746 tagggaagtcttgacttttctagatc-ttctagttttatatactaaaatatccatatctctagacttttctttgtttctagatttttctagtttgtaatg 8414648  T
Q  464 gagagccttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8414647 gagagccttcctagagtagtataaataaggctcaccacctagtgttttg 8414599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 259 - 534
Target Start/End: Complemental strand, 42678940 - 42678647
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctgaa-tactagggaataatatgaaagttactagacact--actag 355  Q
    |||||||||||||||||||||| |||||||   | |||||||||||||||| |||| || ||||| ||||||||| | ||| |||||||||||  ||||     
T  42678940 tgatgaagaataatatggaagtttctagaaaactaaagaataatatggaagtctctaaaatactatggaataataaggaagctactagacactctactaa 42678841  T
Q  356 ataa------gcactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgt---------tt 440  Q
    ||||      |||||||| ||  |||||  ||||||||||||||||| | ||||  ||||||||||||||| ||||| | |||||||||         ||    
T  42678840 ataaaataaagcactaggaaaatcttaatgtttctagatccttctagtcatatgacctagagtatccatgtttctaggcctttctttgtaatcaatgttt 42678741  T
Q  441 ctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttgcatcatcaagcattgaagcatt 534  Q
    ||||||| |||||||| |||||| ||| |||||| |  |||||||||||||||||||||| | ||||||||| |  ||||||||||||| ||||    
T  42678740 ctagataattctagtttgtaatgtagaaccttcccaaggtagtataaataaggctcaccaccaagtgttttgaaggatcaagcattgaatcatt 42678647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 436 - 510
Target Start/End: Complemental strand, 28610424 - 28610350
Alignment:
Q  436 tgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttt 510  Q
    ||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||| | |||||||    
T  28610424 tgtttctagatatttctagtttgtaatgtagagcctttctagagtagtataaataaggctcaccaccaagtgttt 28610350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 436 - 500
Target Start/End: Complemental strand, 8731359 - 8731295
Alignment:
Q  436 tgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcacca 500  Q
    |||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||    
T  8731359 tgtttctagatatttctaatttgtaatgtagagccttcctagagtagtataaataaggctcacca 8731295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 259 - 334
Target Start/End: Original strand, 3932507 - 3932583
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatg 334  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||  ||||||||||    
T  3932507 tgatgaagaataatatggaagtctctagaatgatgaagaataatatggaagtctctagaagactaaagaataatatg 3932583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 259 - 334
Target Start/End: Original strand, 3934746 - 3934822
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatg 334  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||  ||||||||||    
T  3934746 tgatgaagaataatatggaagtctctagaatgatgaagaataatatggaagtctctagaagactaaagaataatatg 3934822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 314
Target Start/End: Complemental strand, 16497230 - 16497175
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct 314  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  16497230 tgatcaagaataatatggaagtctctagaatgatcaagaataatatggaagtctct 16497175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 19094092 - 19094042
Alignment:
Q  388 tccttctaggcttatgtactagagtatccatgtctctagacttttctttgt 438  Q
    ||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  19094092 tccttctagacttataaactagagtatccatgtctctagacttttctttgt 19094042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 459 - 500
Target Start/End: Original strand, 18395337 - 18395378
Alignment:
Q  459 taatggagagccttcctagagtagtataaataaggctcacca 500  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  18395337 taatgtagagccttcctagagtagtataaataaggctcacca 18395378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 16497200 - 16497152
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatgga 307  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||||    
T  16497200 tgatcaagaataatatggaagtctctagaatgatcaagaataatatgga 16497152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 350
Target Start/End: Complemental strand, 16535352 - 16535260
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacact 350  Q
    |||| |||||||||||||||| |||||||||  | ||||||||| |||||| |||| |||||||| |||||||||   ||| |||||||||||    
T  16535352 tgatcaagaataatatggaagcctctagaataataaagaataatgtggaagtctctagaatactatggaataataaagaagctactagacact 16535260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 350
Target Start/End: Original strand, 16630310 - 16630402
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacact 350  Q
    |||| |||||||||||||||| |||||||||  | ||||||||| |||||| |||| |||||||| |||||||||   ||| |||||||||||    
T  16630310 tgatcaagaataatatggaagcctctagaataataaagaataatgtggaagtctctagaatactatggaataataaagaagctactagacact 16630402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 259 - 314
Target Start/End: Complemental strand, 16535382 - 16535327
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct 314  Q
    |||| ||||||||||||||||||| ||||||| | |||||||||||||||| ||||    
T  16535382 tgatcaagaataatatggaagtctatagaatgatcaagaataatatggaagcctct 16535327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 259 - 314
Target Start/End: Original strand, 16630280 - 16630335
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct 314  Q
    |||| ||||||||||||||||||| ||||||| | |||||||||||||||| ||||    
T  16630280 tgatcaagaataatatggaagtctatagaatgatcaagaataatatggaagcctct 16630335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 350
Target Start/End: Complemental strand, 16497170 - 16497078
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacact 350  Q
    |||| |||||||||||||| | |||||||||  | ||||||||| ||||||  ||| |||||||| ||||||||| | ||| |||||||||||    
T  16497170 tgatcaagaataatatggatgcctctagaataataaagaataatgtggaagtttctagaatactatggaataataaggaagctactagacact 16497078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 8414886 - 8414839
Alignment:
Q  285 agaatggtgaagaataatatggaagactct-gaatactagggaataat 331  Q
    |||||| ||||||||||||||||||||||| ||||||||| |||||||    
T  8414886 agaatgatgaagaataatatggaagactctagaatactagagaataat 8414839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 534
Target Start/End: Complemental strand, 21769220 - 21769153
Alignment:
Q  467 agccttcctagagtagtataaataaggctcaccatctagtgttttgcatcatcaagcattgaagcatt 534  Q
    |||||| |||||||||||||||||||||||| || |  |||||| ||||  ||||||||| |||||||    
T  21769220 agccttactagagtagtataaataaggctcatcaccctgtgtttggcatattcaagcattcaagcatt 21769153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 331
Target Start/End: Original strand, 3051995 - 3052035
Alignment:
Q  292 tgaagaataatatggaagactct-gaatactagggaataat 331  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  3051995 tgaagaataatatggaagactctagaatactagagaataat 3052035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 265 - 512
Target Start/End: Complemental strand, 29833431 - 29833183
Alignment:
Q  265 agaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagataagcac 363  Q
    |||||||| |||||||||||||||   | ||||||||||| |||| |||| |||||||||||||||||| | ||| ||||||||||||||| ||||||||    
T  29833431 agaataatgtggaagtctctagaacactaaagaataatatagaagtctctagaatactagggaataataaggaagctactagacactactaaataagcac 29833332  T
Q  364 tagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatg 463  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29833331 tagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagtttgtaatg 29833232  T
Q  464 gagagccttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29833231 gagagccttcctagagtagtataaataaggctcaccacctagtgttttg 29833183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 265 - 534
Target Start/End: Complemental strand, 2404183 - 2403912
Alignment:
Q  265 agaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagataagcac 363  Q
    |||||||| ||||| |||||||||   | ||||||||||| |||| |||| |||||||||||||||||| | ||| ||||||| ||||||| ||||||||    
T  2404183 agaataatgtggaaatctctagaagactaaagaataatatagaagtctctagaatactagggaataataaggaagctactagatactactaaataagcac 2404084  T
Q  364 tagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatg 463  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  2404083 tagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatg 2403984  T
Q  464 gagagccttcctagagtagtataaataaggctcaccatctagtgtttt-gcatcatcaagcattgaagcatt 534  Q
    ||||| |||||||||||||||||||||||| ||||||  ||||||||| |||||||||||||| ||| ||||    
T  2403983 gagagtcttcctagagtagtataaataaggttcaccacttagtgttttggcatcatcaagcatagaaacatt 2403912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 266 - 512
Target Start/End: Complemental strand, 734933 - 734686
Alignment:
Q  266 gaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagataagcact 364  Q
    ||||||| ||||||||| |||||   | ||||||||||| |||| |||| |||||||||||||||| | | ||| ||||||||||||||| |||||||||    
T  734933 gaataatgtggaagtctttagaagactaaagaataatatagaagtctctagaatactagggaataacaaggaagctactagacactactaaataagcact 734834  T
Q  365 agggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatgg 464  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  734833 agggaagtcttaacttttctagatccttctaggtttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatgg 734734  T
Q  465 agagccttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||    
T  734733 agagccttcctagaatagtataaataaggctcaccacctagtgttttg 734686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 29833856 - 29833965
Alignment:
Q  420 tctctagacttttctttgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttgcatcatc 519  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| || |||    
T  29833856 tctctagacttttctttgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcactacctagtgttttggatgatc 29833955  T
Q  520 aagcattgaa 529  Q
    ||||||||||    
T  29833956 aagcattgaa 29833965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 433 - 534
Target Start/End: Complemental strand, 2410136 - 2410034
Alignment:
Q  433 ctttgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcaccatctagtgtttt-gcatcatcaagcattgaagc 531  Q
    ||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||| |    
T  2410136 ctttgtttctagatattgctaatttgtaatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatcatcaagcatagaaac 2410037  T
Q  532 att 534  Q
    |||    
T  2410036 att 2410034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 259 - 534
Target Start/End: Complemental strand, 8933919 - 8933625
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctgaa-tactagggaataatatgaaagttactagacact--actag 355  Q
    |||||||||||||||||||| | |||| ||   | ||||| |||||||||| |||| || ||||| ||||||||| | ||| || ||||||||  ||||     
T  8933919 tgatgaagaataatatggaaatttctaaaaaactaaagaaaaatatggaagtctctaaaatactatggaataataaggaagctattagacactctactaa 8933820  T
Q  356 ataa------gcactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgt---------tt 440  Q
    ||||      |||||||| ||  |||||  ||||||||||||||||| | |||| |||||||||||||||| ||||| | |||||||||         ||    
T  8933819 ataaaataaagcactaggaaaatcttaatgtttctagatccttctagtcatatgaactagagtatccatgtttctaggcctttctttgtaatcaatgttt 8933720  T
Q  441 ctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttgc-atcatcaagcattgaagcatt 534  Q
    ||||||| |||||||| |||||| ||| ||||||||||||||||||||||||||||||||   |||||||||| |  ||||||||||||| ||||    
T  8933719 ctagataattctagtttgtaatgtagaaccttcctagagtagtataaataaggctcaccactaagtgttttgcaagaatcaagcattgaatcatt 8933625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 436 - 500
Target Start/End: Original strand, 10909108 - 10909172
Alignment:
Q  436 tgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcacca 500  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  10909108 tgtttctagatatttctagtttgtaatgtagagccttcctagagtagtataaataaggctcacca 10909172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 436 - 500
Target Start/End: Original strand, 10911352 - 10911416
Alignment:
Q  436 tgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcacca 500  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  10911352 tgtttctagatatttctagtttgtaatgtagacccttcctagagtagtataaataaggctcacca 10911416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 436 - 500
Target Start/End: Original strand, 13011698 - 13011762
Alignment:
Q  436 tgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcacca 500  Q
    ||||||||||||||| |||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  13011698 tgtttctagatatttttagtttttaatgtagagccttcctagagtagtataaataaggctcacca 13011762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 512
Target Start/End: Original strand, 18353733 - 18353888
Alignment:
Q  359 agcactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctct--agacttttctttgtttctagatatttctagtt 456  Q
    ||||||||| ||  |||| ||||||||||||||||||| | |||| |||||||||||||||||| |     ||  ||  ||||||||||| |||||| ||    
T  18353733 agcactaggaaaatcttatcttttctagatccttctagtcatatgaactagagtatccatgtcttttatttctaatcaatgtttctagatctttctattt 18353832  T
Q  457 ggtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
     ||||||  |||| || |||||||||||||| || ||||||||  | |||||||||    
T  18353833 tgtaatgtggagcattactagagtagtataattagggctcacctccaagtgttttg 18353888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 734974 - 734927
Alignment:
Q  285 agaatggtgaagaataatatggaagactct-gaatactagggaataat 331  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||    
T  734974 agaatgatgaagaataatatggaagactctagaatactagggaataat 734927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 29833471 - 29833424
Alignment:
Q  285 agaatggtgaagaataatatggaagactct-gaatactagggaataat 331  Q
    |||||| ||||||||||||||||||||||| ||||||||| |||||||    
T  29833471 agaatgatgaagaataatatggaagactctagaatactagagaataat 29833424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 419266 - 419221
Alignment:
Q  264 aagaataatatggaagtctctagaatggtgaagaataatatggaag 309  Q
    |||||||||||||||||||||| |||| | |||||||||| |||||    
T  419266 aagaataatatggaagtctctataatgttaaagaataataaggaag 419221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 3e-83; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 266 - 512
Target Start/End: Original strand, 31486712 - 31486960
Alignment:
Q  266 gaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagataagcact 364  Q
    ||||||| |||||| ||||||||   |  |||||||||| |||| |||| |||||||||||||||||| | ||| ||||||||||||||| |||||||||    
T  31486712 gaataatgtggaagcctctagaagactagagaataatatagaagtctctagaatactagggaataataaggaagctactagacactactaaataagcact 31486811  T
Q  365 agggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatgg 464  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||| |||||||    
T  31486812 agggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctctggacttttctttgtttccagatatttctagtttgtaatgg 31486911  T
Q  465 agagccttcctagagtagtataaataaggctcaccatct-agtgttttg 512  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||    
T  31486912 agagccttcctagagtagtataaataaggctcaccacctaagtgttttg 31486960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 266 - 512
Target Start/End: Original strand, 31488996 - 31489244
Alignment:
Q  266 gaataatatggaagtctctagaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacactactagataagcact 364  Q
    ||||||| |||||||||||| ||   | ||||||||||| |||| |||| |||||||||||||||||| | ||| ||||||||||||||| |||||||||    
T  31488996 gaataatgtggaagtctctaaaagactaaagaataatatagaagtctctagaatactagggaataataaggaagctactagacactactaaataagcact 31489095  T
Q  365 agggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatgg 464  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||| |||||||    
T  31489096 agggaagtcttagcttttctagatccttctaagcttatgtactagagtatccatatctctggacttttctttgtttccagatatttctagtttgtaatgg 31489195  T
Q  465 agagccttcctagagtagtataaataaggctcaccatct-agtgttttg 512  Q
    |||||||||||| ||||||||||||||||||||||| || |||||||||    
T  31489196 agagccttcctaaagtagtataaataaggctcaccacctaagtgttttg 31489244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 380 - 530
Target Start/End: Original strand, 29801924 - 29802075
Alignment:
Q  380 tttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatggagagccttcctagag 479  Q
    |||||| |||||||||| | |||| |||| || |||||| ||||||||||||||||||||| ||||||||||||||| ||||||| ||| ||||||||||    
T  29801924 tttctaaatccttctagtcatatgaactatagcatccatatctctagacttttctttgtttgtagatatttctagtttgtaatggggagtcttcctagag 29802023  T
Q  480 tagtataaataaggctcaccatctagtgttt-tgcatcatcaagcattgaag 530  Q
    ||||||||||||||||||||| | |||||||  ||||  |||||||||||||    
T  29802024 tagtataaataaggctcaccaccaagtgtttaggcatagtcaagcattgaag 29802075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 360 - 510
Target Start/End: Complemental strand, 34576860 - 34576700
Alignment:
Q  360 gcactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgt---------ttctagatattt 450  Q
    ||||||| |||  |||||||||||||||||||||||| | |||| |||||||||| |||||||||||||||||||||||         ||||||||||||    
T  34576860 gcactagagaaatcttaacttttctagatccttctagtcatatgaactagagtattcatgtctctagacttttctttgtaatcaatgtttctagatattt 34576761  T
Q  451 ctagttggtaatggagagccttcct-agagtagtataaataaggctcaccatctagtgttt 510  Q
    |||||| |||||| ||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  34576760 ctagtttgtaatgtagagccttcctaagattagtataaataaggctcaccatcaagtgttt 34576700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 373 - 510
Target Start/End: Original strand, 23859931 - 23860077
Alignment:
Q  373 cttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgt---------ttctagatatttctagttggtaatg 463  Q
    |||| ||||||||||||||||||| |||||| |||||||||| ||||| ||||| | |||||||||         ||||||||| |||||||| ||||||    
T  23859931 cttagcttttctagatccttctagtcttatgaactagagtatgcatgtttctaggcctttctttgtaatcaatatttctagataattctagtttgtaatg 23860030  T
Q  464 gagagccttcctagagtagtataaataaggctcaccatctagtgttt 510  Q
     |||||||||||||||||||||||||||||||||||| | |||||||    
T  23860031 tagagccttcctagagtagtataaataaggctcaccaccaagtgttt 23860077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 436 - 500
Target Start/End: Complemental strand, 42275739 - 42275675
Alignment:
Q  436 tgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcacca 500  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  42275739 tgtttctagatatttctagtttgtaatgtagagccttcctagagtagtataaataaggctcacca 42275675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 436 - 500
Target Start/End: Complemental strand, 42277965 - 42277901
Alignment:
Q  436 tgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcacca 500  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||    
T  42277965 tgtttctagatatttctagtttgtaatgtagagtcttcctagagtagtataaataaggctcacca 42277901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 31486671 - 31486718
Alignment:
Q  285 agaatggtgaagaataatatggaagactct-gaatactagggaataat 331  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  31486671 agaatggtgaagaataatatggaagactctagaatactagggaataat 31486718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 31488955 - 31489002
Alignment:
Q  285 agaatggtgaagaataatatggaagactct-gaatactagggaataat 331  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  31488955 agaatggtgaagaataatatggaagactctagaatactagggaataat 31489002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 314
Target Start/End: Complemental strand, 34576975 - 34576920
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct 314  Q
    |||||||||||||| |||||||||||||||   | |||||||||||||||| ||||    
T  34576975 tgatgaagaataatgtggaagtctctagaacactaaagaataatatggaagtctct 34576920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 438
Target Start/End: Complemental strand, 8995287 - 8995229
Alignment:
Q  380 tttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgt 438  Q
    ||||||||||||||||| | |||| |||||||||||||||  ||||| | |||||||||    
T  8995287 tttctagatccttctagtcatatgaactagagtatccatgcttctaggcctttctttgt 8995229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 512
Target Start/End: Complemental strand, 8995210 - 8995169
Alignment:
Q  471 ttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
    |||||||||||||||||||||||||| ||| | |||||||||    
T  8995210 ttcctagagtagtataaataaggctctccaccaagtgttttg 8995169  T

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Target: scaffold0599 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 399 - 512
Target Start/End: Original strand, 1579 - 1692
Alignment:
Q  399 ttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcac 498  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1579 ttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatggagagccttcctagagtagtataaataaggctcac 1678  T
Q  499 catctagtgttttg 512  Q
    || |||||||||||    
T  1679 cacctagtgttttg 1692  T

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Target: scaffold0050 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 357 - 537
Target Start/End: Original strand, 29261 - 29441
Alignment:
Q  357 taagcactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagtt 456  Q
    ||||||||||||||  |||||  ||||||||||||||||| | |||||||||||  |||||| |||||||||||||||| |||||||||||||| |||||    
T  29261 taagcactagggaaatcttaatgtttctagatccttctagtcatatgtactagaacatccatatctctagacttttctt-gtttctagatatttttagtt 29359  T
Q  457 ggtaatggagagccttcctagagtagtataaataaggctcaccatctagtg-ttttgcatcatcaagcattgaagcatttaa 537  Q
     ||||||||||| ||||||||||||||||||||||||||||||| | ||||  |  ||||  ||||||||||||||||||||    
T  29360 tgtaatggagagtcttcctagagtagtataaataaggctcaccaccaagtgcgtaggcatactcaagcattgaagcatttaa 29441  T

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Target: scaffold0050; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 357 - 500
Target Start/End: Original strand, 31574 - 31718
Alignment:
Q  357 taagcactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgt--ctctagacttttctttgtttctagatatttctag 454  Q
    ||||||||||||||  |||||  ||||||||||||||||| | |||||||||||  |||||| |  ||||||||||||||| |||| |||||||||||||    
T  31574 taagcactagggaaatcttaatgtttctagatccttctagtcatatgtactagaacatccatatatctctagacttttctt-gtttttagatatttctag 31672  T
Q  455 ttggtaatggagagccttcctagagtagtataaataaggctcacca 500  Q
    || |||||||||||||||||||||||||||||||||||||||||||    
T  31673 tttgtaatggagagccttcctagagtagtataaataaggctcacca 31718  T

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Target: chr3 (Bit Score: 82; Significance: 2e-38; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 357 - 510
Target Start/End: Complemental strand, 18966374 - 18966221
Alignment:
Q  357 taagcactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctttgtttctagatatttctagtt 456  Q
    ||||||||||| ||  |||||  ||||||||||||||||| | || |||||||||||||||| ||||| |||||||||| |||||||||||||||||||     
T  18966374 taagcactaggaaaatcttaatgtttctagatccttctagtcatacgtactagagtatccatatctcttgacttttcttggtttctagatatttctagtg 18966275  T
Q  457 ggtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttt 510  Q
     || |||||| | ||||||||||||||||||||||||||||||| | |||||||    
T  18966274 tgtcatggagtgtcttcctagagtagtataaataaggctcaccaccaagtgttt 18966221  T

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Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 436 - 512
Target Start/End: Original strand, 4530835 - 4530911
Alignment:
Q  436 tgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  4530835 tgtttctagatatttctagtttgtaatgtagagccttcctagagtagtataaataaggctcaccacctagtgttttg 4530911  T

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Target: chr3; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 442 - 512
Target Start/End: Original strand, 4533138 - 4533208
Alignment:
Q  442 tagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcaccatctagtgttttg 512  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  4533138 tagatatttctagtttgtaatgtagagccttcctagagtagtataaataaggctcaccacctagtgttttg 4533208  T

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Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 256
Target Start/End: Complemental strand, 42431681 - 42431530
Alignment:
Q  105 aattcgtatgaaatgagggtgtaggagcggaattcggagacttatcctggtttgcccggtttctacgttttccacactttttatgctacggttgagggtt 204  Q
    ||||||||||| ||||| ||| ||||| ||||||| | | ||||||||||||| || ||||  || ||||| || | |||   |||||| || |||||||    
T  42431681 aattcgtatgagatgagagtggaggagaggaattcagggtcttatcctggtttacctggttgttatgttttgcatattttgagtgctacagtggagggtt 42431582  T
Q  205 tgccggagggtgatttttgctcttctgaggtggacgagtacgctgattctga 256  Q
    |||||||||||||||||||| | | ||||||||||||||| | |||||||||    
T  42431581 tgccggagggtgatttttgcacgtatgaggtggacgagtatgatgattctga 42431530  T

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Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 1701104 - 1701179
Alignment:
Q  361 cactagggaagacttaacttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttcttt 436  Q
    ||||||||||  |||||||||||||||||||||||| | |||| | |||| ||||||| | ||||| |||||||||    
T  1701104 cactagggaaatcttaacttttctagatccttctagtcatatgaattagattatccatatttctaggcttttcttt 1701179  T

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Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 8535522 - 8535578
Alignment:
Q  379 ttttctagatccttctaggcttatgtactagagtatccatgtctctagacttttctt 435  Q
    |||| ||||||||||||| | |||  |||| ||||||||| ||||||||||||||||    
T  8535522 ttttttagatccttctagtcatataaactaaagtatccatatctctagacttttctt 8535578  T

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Target: scaffold0008 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 314
Target Start/End: Original strand, 73069 - 73124
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactct 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  73069 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagtctct 73124  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 285 - 500
Target Start/End: Original strand, 21199137 - 21199372
Alignment:
Q  285 agaatggtgaagaataatatggaagactct-gaatactagggaataatatgaaagttactagacact--actagataa------gcactagggaagactt 375  Q
    |||||| |||||||||||||||||| |||| |||||||| ||||||||| | ||| ||||| |||||  |||| ||||      |||||||  ||  |||    
T  21199137 agaatgatgaagaataatatggaagtctctagaatactatggaataataaggaagctactatacactctactaaataaaataaagcactagttaaatctt 21199236  T
Q  376 aacttttctagatccttctaggcttatgtactagagtatccat--gtctctagacttttctttgt---------ttctagatatttctagttggtaatgg 464  Q
    ||  ||||||||||||||||| | |||| ||| ||||||||||  |||||||| | |||| ||||         |||||||||||||||||| ||||||     
T  21199237 aatgtttctagatccttctagtcatatgaactggagtatccatatgtctctaggcctttcattgtaatcaatgtttctagatatttctagtttgtaatgt 21199336  T
Q  465 agagccttcctagagtagtataaataaggctcacca 500  Q
    | ||||||||| ||||| ||||||||||| ||||||    
T  21199337 acagccttcctggagtactataaataaggttcacca 21199372  T

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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 534
Target Start/End: Original strand, 20642221 - 20642285
Alignment:
Q  470 cttcctagagtagtataaataaggctcaccatctagtgttttgcatcatcaagcattgaagcatt 534  Q
    ||||||| |||||||||||||||||||| |||| ||||| | | ||  |||||||||||||||||    
T  20642221 cttcctacagtagtataaataaggctcatcatcaagtgtgtaggatagtcaagcattgaagcatt 20642285  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 289
Target Start/End: Original strand, 21199141 - 21199171
Alignment:
Q  259 tgatgaagaataatatggaagtctctagaat 289  Q
    |||||||||||||||||||||||||||||||    
T  21199141 tgatgaagaataatatggaagtctctagaat 21199171  T

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Target: scaffold0312 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 309
Target Start/End: Original strand, 11305 - 11350
Alignment:
Q  264 aagaataatatggaagtctctagaatggtgaagaataatatggaag 309  Q
    |||||||||||||||||||||| |||| | |||||||||| |||||    
T  11305 aagaataatatggaagtctctataatgttaaagaataataaggaag 11350  T

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