View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1357-INSERTION-3 (Length: 143)
Name: NF1357-INSERTION-3
Description: NF1357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1357-INSERTION-3 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 132; Significance: 6e-69; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 132; E-Value: 6e-69
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 8822203 - 8822068
Alignment:
| Q |
8 |
ctttgagggatgctttgaaggataagagtgcggttctgtctgaaggagaacaaccgtgtacggtgagaatgacggtggcgagaaaaacggttacgacgga |
107 |
Q |
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| T |
8822203 |
ctttgagggatgctttgaaggataagagtgcggttctgtctgacggagaacaaccgtgtacggtgagaatgacggtggcgagaaaaacggttacgacgga |
8822104 |
T |
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| Q |
108 |
gaacgtgaatgaagaagccattggattgggttaagt |
143 |
Q |
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| T |
8822103 |
gaacgtgaatgaagaagccattggattgggttaagt |
8822068 |
T |
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