View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13573_low_1 (Length: 359)

Name: NF13573_low_1
Description: NF13573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13573_low_1
NF13573_low_1
[»] chr4 (16 HSPs)
chr4 (153-341)||(6875375-6875563)
chr4 (18-88)||(6875628-6875698)
chr4 (153-227)||(19468182-19468256)
chr4 (164-210)||(3085357-3085403)
chr4 (153-210)||(19451016-19451073)
chr4 (158-210)||(17409829-17409881)
chr4 (154-214)||(36000056-36000116)
chr4 (164-227)||(40049547-40049610)
chr4 (164-210)||(23545481-23545527)
chr4 (158-208)||(24684843-24684893)
chr4 (153-210)||(27019265-27019322)
chr4 (165-214)||(36968289-36968338)
chr4 (158-210)||(3728254-3728306)
chr4 (154-210)||(8736927-8736983)
chr4 (154-210)||(42480039-42480095)
chr4 (158-210)||(45742373-45742425)
[»] chr1 (22 HSPs)
chr1 (164-214)||(36578333-36578383)
chr1 (154-210)||(41624835-41624891)
chr1 (153-210)||(6180191-6180248)
chr1 (153-210)||(7824974-7825031)
chr1 (154-199)||(36490795-36490840)
chr1 (154-210)||(6754477-6754533)
chr1 (154-210)||(39150443-39150499)
chr1 (154-214)||(47355494-47355554)
chr1 (155-201)||(7520115-7520161)
chr1 (153-210)||(35512730-35512787)
chr1 (158-210)||(13321881-13321933)
chr1 (154-210)||(17919459-17919515)
chr1 (158-210)||(22167340-22167392)
chr1 (154-210)||(23591703-23591759)
chr1 (168-216)||(25186838-25186886)
chr1 (154-210)||(30171884-30171940)
chr1 (154-210)||(30187425-30187481)
chr1 (182-214)||(38539088-38539120)
chr1 (182-214)||(38561306-38561338)
chr1 (163-207)||(43317498-43317542)
chr1 (154-210)||(44918030-44918086)
chr1 (154-210)||(51382377-51382433)
[»] chr8 (21 HSPs)
chr8 (154-210)||(7750673-7750729)
chr8 (164-210)||(26682073-26682119)
chr8 (154-210)||(14816242-14816298)
chr8 (154-210)||(14829442-14829498)
chr8 (155-210)||(8284687-8284742)
chr8 (153-210)||(38843709-38843766)
chr8 (153-210)||(45005975-45006032)
chr8 (154-210)||(7140575-7140631)
chr8 (168-216)||(23840235-23840283)
chr8 (154-210)||(35678391-35678447)
chr8 (155-215)||(40568313-40568373)
chr8 (154-209)||(10974671-10974726)
chr8 (182-216)||(26364134-26364168)
chr8 (153-210)||(9580225-9580282)
chr8 (163-216)||(39701928-39701981)
chr8 (154-210)||(3306171-3306227)
chr8 (154-210)||(9743867-9743923)
chr8 (154-210)||(12131988-12132044)
chr8 (158-206)||(12346015-12346063)
chr8 (154-210)||(38527826-38527882)
chr8 (182-214)||(40716276-40716308)
[»] chr7 (15 HSPs)
chr7 (164-216)||(47457588-47457640)
chr7 (158-223)||(39475840-39475905)
chr7 (164-210)||(19868119-19868165)
chr7 (154-210)||(7170008-7170064)
chr7 (154-210)||(19889346-19889402)
chr7 (154-210)||(25709516-25709572)
chr7 (165-210)||(4969778-4969823)
chr7 (163-232)||(12086056-12086125)
chr7 (154-215)||(36548576-36548637)
chr7 (158-210)||(4161887-4161939)
chr7 (154-210)||(9331967-9332023)
chr7 (155-195)||(31066854-31066894)
chr7 (182-214)||(32117816-32117848)
chr7 (154-210)||(39869128-39869184)
chr7 (158-210)||(45501464-45501516)
[»] chr2 (18 HSPs)
chr2 (153-210)||(43806365-43806422)
chr2 (168-215)||(12919482-12919529)
chr2 (158-216)||(7720114-7720172)
chr2 (168-210)||(36909506-36909548)
chr2 (154-210)||(12016672-12016728)
chr2 (154-210)||(14377430-14377486)
chr2 (154-210)||(15411739-15411795)
chr2 (158-210)||(26003612-26003664)
chr2 (154-210)||(27665160-27665216)
chr2 (168-216)||(40503112-40503160)
chr2 (153-210)||(16754976-16755033)
chr2 (177-210)||(29981364-29981397)
chr2 (158-210)||(16919274-16919326)
chr2 (154-210)||(19228431-19228487)
chr2 (154-198)||(22162193-22162237)
chr2 (154-210)||(22705460-22705516)
chr2 (154-210)||(39904164-39904220)
chr2 (154-214)||(40562194-40562254)
[»] chr6 (9 HSPs)
chr6 (158-210)||(17596318-17596370)
chr6 (153-210)||(34692359-34692416)
chr6 (168-210)||(1814912-1814954)
chr6 (154-208)||(12454073-12454127)
chr6 (154-210)||(5363009-5363065)
chr6 (154-210)||(14228242-14228298)
chr6 (158-210)||(24979270-24979322)
chr6 (154-210)||(28943885-28943941)
chr6 (158-210)||(30623331-30623383)
[»] chr3 (18 HSPs)
chr3 (154-206)||(2379186-2379238)
chr3 (154-210)||(37444152-37444208)
chr3 (163-197)||(28992903-28992937)
chr3 (154-220)||(32553362-32553428)
chr3 (164-214)||(35415148-35415198)
chr3 (153-210)||(42180057-42180114)
chr3 (153-210)||(54527822-54527879)
chr3 (154-210)||(11610920-11610976)
chr3 (158-210)||(27549543-27549595)
chr3 (170-210)||(51618055-51618095)
chr3 (163-210)||(39365257-39365304)
chr3 (168-214)||(8497554-8497600)
chr3 (164-210)||(50204408-50204454)
chr3 (158-214)||(45983510-45983564)
chr3 (154-210)||(20938062-20938118)
chr3 (154-210)||(47386927-47386983)
chr3 (158-210)||(51567939-51567991)
chr3 (164-216)||(54621344-54621396)
[»] scaffold0036 (1 HSPs)
scaffold0036 (154-216)||(94135-94197)
[»] scaffold0129 (1 HSPs)
scaffold0129 (153-210)||(13774-13831)
[»] chr5 (17 HSPs)
chr5 (153-210)||(3398225-3398282)
chr5 (153-210)||(18841821-18841878)
chr5 (154-210)||(8103696-8103752)
chr5 (154-210)||(11636737-11636793)
chr5 (164-216)||(11692758-11692810)
chr5 (168-220)||(24014818-24014870)
chr5 (154-201)||(11375974-11376021)
chr5 (163-210)||(29855995-29856042)
chr5 (165-208)||(33072684-33072727)
chr5 (164-214)||(11360187-11360237)
chr5 (168-210)||(23995552-23995594)
chr5 (158-215)||(3737996-3738053)
chr5 (167-208)||(11250086-11250127)
chr5 (153-210)||(26376685-26376742)
chr5 (154-210)||(2795529-2795585)
chr5 (169-217)||(28378708-28378756)
chr5 (166-210)||(30328455-30328499)
[»] scaffold0631 (1 HSPs)
scaffold0631 (165-208)||(449-492)
[»] scaffold0128 (1 HSPs)
scaffold0128 (154-191)||(44394-44431)
[»] scaffold0061 (1 HSPs)
scaffold0061 (154-210)||(52895-52951)
[»] scaffold0017 (1 HSPs)
scaffold0017 (154-210)||(145683-145739)


Alignment Details
Target: chr4 (Bit Score: 140; Significance: 3e-73; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 153 - 341
Target Start/End: Complemental strand, 6875563 - 6875375
Alignment:
Q  153 ccaataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaatctatataaaaattggatatatttttaatgacaaaaga 252  Q
    |||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||| |||  |||||||||||| |||||||||||||||||||||||    
T  6875563 ccaataaaatattactatttttagttgttttaacatgtgcaatattgcaaatgttagacaaacttatataaaaatttgatatatttttaatgacaaaaga 6875464  T
Q  253 aacttattaacccaaataaaaaattgtttcatggcttgtnnnnnnncaaattgtttcacggtttattaggaacgaacctaccaggaagc 341  Q
    |||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  6875463 aacttattaacccaaataaaaaattgtttcatggcttgtaaaaaaacaaattgtttcacggtttattaggaacgaacctaccaggaagc 6875375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 6875698 - 6875628
Alignment:
Q  18 atgaaaaattttgtgaatataaaaagagtttttctacgatgcgcaaatgttataaaaattaaaatggtcac 88  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6875698 atgaaaaattttgtgaatataaaaagagtttttctatgatgcgcaaatgttataaaaattaaaatggtcac 6875628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 19468256 - 19468182
Alignment:
Q  153 ccaataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaatctatataaaaat 227  Q
    |||| |||| ||||||||| ||| ||||||||||||||||||| ||||| |||||||| ||| ||||||| ||||    
T  19468256 ccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaacctatatataaat 19468182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 3085403 - 3085357
Alignment:
Q  164 ttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  3085403 ttactactattaattgttttaacatgtgcaatgttgcacatgttaga 3085357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 19451016 - 19451073
Alignment:
Q  153 ccaataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| |||| ||||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  19451016 ccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 19451073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 17409881 - 17409829
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  17409881 aaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 17409829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 36000056 - 36000116
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaa 214  Q
    |||||||| ||||||||||||| ||   ||||||||| |||||||||| ||||||||||||    
T  36000056 caataaaaagttactacttttagttaccttaacatgtacaatattgcatatgttagataaa 36000116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 40049610 - 40049547
Alignment:
Q  164 ttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaatctatataaaaat 227  Q
    |||||||||||| ||  ||||||||||||||||||||| |||||||| ||| | ||| ||||||    
T  40049610 ttactacttttagttactttaacatgtgcaatattgcacatgttagacaaacccataaaaaaat 40049547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 23545527 - 23545481
Alignment:
Q  164 ttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  23545527 ttactactattagttgttttaacatgtgcaatgttgcacatgttaga 23545481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 24684893 - 24684843
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgtta 208  Q
    |||| ||||||||| ||| ||||||||||||||| ||| ||||||||||||    
T  24684893 aaaaagttactactattagttgttttaacatgtgtaatgttgcaaatgtta 24684843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 27019322 - 27019265
Alignment:
Q  153 ccaataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| |||| ||||||||| ||| ||||||||||||||||||| ||||| | ||||||    
T  27019322 ccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacacgttaga 27019265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 36968338 - 36968289
Alignment:
Q  165 tactacttttaattgttttaacatgtgcaatattgcaaatgttagataaa 214  Q
    ||||||||||| ||  ||||||||||| ||||||||| ||||||||||||    
T  36968338 tactacttttagttactttaacatgtgtaatattgcacatgttagataaa 36968289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 3728306 - 3728254
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||||||||||||| ||||| |||||||| |||||||| | ||||||||    
T  3728306 aaaaagttactacttttagttgttataacatgttcaatattgtacatgttaga 3728254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 8736927 - 8736983
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    ||||||||  ||||||||||||  ||| |||||||||||||| ||||| ||||||||    
T  8736927 caataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttaga 8736983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 42480039 - 42480095
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||||||| ||||| ||| ||| ||||| ||||||||||||||| ||| ||||    
T  42480039 caataaaatgttgctactcttagttgctttaagatgtgcaatattgcatatgctaga 42480095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 45742425 - 45742373
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| |||| |||| ||| ||||||||||||||||||| ||||| ||||||||    
T  45742425 aaaaagttaatactattagttgttttaacatgtgcaatgttgcacatgttaga 45742373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 36578383 - 36578333
Alignment:
Q  164 ttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaa 214  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  36578383 ttactacttttaattgctttaacatgtgcaatattgcacatgttagataaa 36578333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 41624891 - 41624835
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||| ||||||| ||||| ||| ||||||||||||||||||||| ||||||||    
T  41624891 caataaaaagttactatttttagttgctttaacatgtgcaatattgcacatgttaga 41624835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 6180248 - 6180191
Alignment:
Q  153 ccaataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| |||| ||||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  6180248 ccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 6180191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 7824974 - 7825031
Alignment:
Q  153 ccaataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| |||| ||||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  7824974 ccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 7825031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 36490840 - 36490795
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattg 199  Q
    ||||||||  |||||||||||||||| |||||||||||||||||||    
T  36490840 caataaaaacttactacttttaattgctttaacatgtgcaatattg 36490795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 6754533 - 6754477
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||| ||||||| ||||| |||  |||||||||||||||||||| ||||||||    
T  6754533 caataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttaga 6754477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 39150443 - 39150499
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||| ||||||||||||| |||  |||||||||||||||||||| ||||||||    
T  39150443 caatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttaga 39150499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 47355494 - 47355554
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaa 214  Q
    |||||||| |||  |||||||| ||| ||||||||||||||||||||| || |||||||||    
T  47355494 caataaaaagtttatacttttagttgctttaacatgtgcaatattgcacattttagataaa 47355554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 7520115 - 7520161
Alignment:
Q  155 aataaaatgttactacttttaattgttttaacatgtgcaatattgca 201  Q
    |||||||  |||||||||||| ||| |||||||||||||||||||||    
T  7520115 aataaaaatttactacttttagttgctttaacatgtgcaatattgca 7520161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 35512787 - 35512730
Alignment:
Q  153 ccaataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| |||| ||||||||| ||| |||||||||||| |||||| ||||| ||||||||    
T  35512787 ccaagaaaaagttactactattagttgttttaacatttgcaatgttgcacatgttaga 35512730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 13321933 - 13321881
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||||||||| ||| |||||||||||||| |||| ||||| ||||||||    
T  13321933 aaaaagttactactattagttgttttaacatgtacaatgttgcacatgttaga 13321881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 17919515 - 17919459
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||| ||||||||||||| |||  ||||||||| |||||||||| ||||||||    
T  17919515 caatgaaaagttactacttttagttgccttaacatgtacaatattgcacatgttaga 17919459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 22167392 - 22167340
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||||||||| ||| ||||||||||||||||||| ||||| ||| ||||    
T  22167392 aaaaagttactactattagttgttttaacatgtgcaatgttgcacatggtaga 22167340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 23591759 - 23591703
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    ||||||||  |||||| ||||| ||| ||||||||||||||| ||||| ||||||||    
T  23591759 caataaaaacttactaattttagttgctttaacatgtgcaatgttgcacatgttaga 23591703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 25186886 - 25186838
Alignment:
Q  168 tacttttaattgttttaacatgtgcaatattgcaaatgttagataaatc 216  Q
    |||||||| ||||||||||||||||||| ||||| || ||||| |||||    
T  25186886 tacttttagttgttttaacatgtgcaatgttgcacatattagacaaatc 25186838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 30171940 - 30171884
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    ||||||||  ||||||||||||  ||| |||||||||||||| ||||| ||||||||    
T  30171940 caataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttaga 30171884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 30187481 - 30187425
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    ||||||||  ||||||||||||  ||| |||||||||||||| ||||| ||||||||    
T  30187481 caataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttaga 30187425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 38539120 - 38539088
Alignment:
Q  182 ttaacatgtgcaatattgcaaatgttagataaa 214  Q
    |||||||||||||||||||| ||||||||||||    
T  38539120 ttaacatgtgcaatattgcacatgttagataaa 38539088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 38561338 - 38561306
Alignment:
Q  182 ttaacatgtgcaatattgcaaatgttagataaa 214  Q
    |||||||||||||||||||| ||||||||||||    
T  38561338 ttaacatgtgcaatattgcacatgttagataaa 38561306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 43317542 - 43317498
Alignment:
Q  163 gttactacttttaattgttttaacatgtgcaatattgcaaatgtt 207  Q
    ||||||||||||| ||| |||||||||| |||||||||| |||||    
T  43317542 gttactacttttagttgctttaacatgtacaatattgcacatgtt 43317498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 44918086 - 44918030
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    ||||||||  |||||||||||| ||   |||||||||||||||||||| ||||||||    
T  44918086 caataaaaatttactacttttagttaccttaacatgtgcaatattgcacatgttaga 44918030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 51382433 - 51382377
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||| ||||||||||||| ||   |||||||||||||||||||| ||||||||    
T  51382433 caatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttaga 51382377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 7750729 - 7750673
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||| ||||||||    
T  7750729 caataaaaagttgctacttttagttgttttaacatgtgcaatattgcacatgttaga 7750673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 26682119 - 26682073
Alignment:
Q  164 ttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||    
T  26682119 ttactacttttagttgttttaacatgtgcaatattgcacatgttaga 26682073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 14816242 - 14816298
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||| ||||||||||||| ||  ||||||||||||||||||||| ||||||||    
T  14816242 caataaaaagttactacttttagtttctttaacatgtgcaatattgcacatgttaga 14816298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 14829498 - 14829442
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||| ||||||||||||| ||  ||||||||||||||||||||| ||||||||    
T  14829498 caataaaaagttactacttttagtttctttaacatgtgcaatattgcacatgttaga 14829442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 8284687 - 8284742
Alignment:
Q  155 aataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    ||||||| ||||||||||||| ||| |||||||||||||||| |||| ||||||||    
T  8284687 aataaaaagttactacttttagttgctttaacatgtgcaatactgcacatgttaga 8284742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 38843766 - 38843709
Alignment:
Q  153 ccaataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| |||| ||||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  38843766 ccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 38843709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 45006032 - 45005975
Alignment:
Q  153 ccaataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| |||| ||||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  45006032 ccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 45005975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 7140575 - 7140631
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||| ||||||||||||| ||   |||||||||||||||||||| ||||||||    
T  7140575 caataaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttaga 7140631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 23840283 - 23840235
Alignment:
Q  168 tacttttaattgttttaacatgtgcaatattgcaaatgttagataaatc 216  Q
    ||||||||||||||||||||||||| || ||||| |||||||| |||||    
T  23840283 tacttttaattgttttaacatgtgccatgttgcacatgttagacaaatc 23840235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 35678391 - 35678447
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||| ||||||||||||| ||  ||||||||||||||||||||| ||||||||    
T  35678391 caatgaaaagttactacttttagtttctttaacatgtgcaatattgcacatgttaga 35678447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 40568373 - 40568313
Alignment:
Q  155 aataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaat 215  Q
    ||||||| ||||| ||||||| ||||||||||||||| |||||||||  ||||||| ||||    
T  40568373 aataaaaagttacaacttttagttgttttaacatgtgaaatattgcatgtgttagacaaat 40568313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 10974671 - 10974726
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttag 209  Q
    |||||||||||||||||||||| ||| |||||||| | ||||| |||| |||||||    
T  10974671 caataaaatgttactacttttagttgctttaacatatacaatagtgcatatgttag 10974726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 26364134 - 26364168
Alignment:
Q  182 ttaacatgtgcaatattgcaaatgttagataaatc 216  Q
    |||||||||||||||||||| ||||||||||||||    
T  26364134 ttaacatgtgcaatattgcacatgttagataaatc 26364168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 9580225 - 9580282
Alignment:
Q  153 ccaataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| |||| ||||||||| ||| ||||||||||||||||||| ||||| || |||||    
T  9580225 ccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatattaga 9580282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 39701928 - 39701981
Alignment:
Q  163 gttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaatc 216  Q
    ||||||||||||| ||   |||||||||||||||||||| |||||||| |||||    
T  39701928 gttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaatc 39701981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 3306171 - 3306227
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    ||||||||  |||||||||||| ||   |||||||||||||||||||| ||||||||    
T  3306171 caataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgttaga 3306227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 9743923 - 9743867
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    ||||||||  |||||||||||| |||| ||||||||  |||||||||| ||||||||    
T  9743923 caataaaaaattactacttttagttgtcttaacatgcacaatattgcacatgttaga 9743867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 12132044 - 12131988
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||| ||| ||||||||| ||  ||||||||||||||| ||||| ||||||||    
T  12132044 caataaaaagttgctacttttagtttctttaacatgtgcaatgttgcacatgttaga 12131988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 12346063 - 12346015
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgt 206  Q
    |||| ||||||||| ||||||||||||||||||| ||| ||||| ||||    
T  12346063 aaaaagttactactattaattgttttaacatgtgtaatgttgcacatgt 12346015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 38527882 - 38527826
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||| |||| |||||||| |||  |||||||||||||||||||| ||||||||    
T  38527882 caatgaaaagttattacttttagttgccttaacatgtgcaatattgcacatgttaga 38527826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 40716308 - 40716276
Alignment:
Q  182 ttaacatgtgcaatattgcaaatgttagataaa 214  Q
    |||||||||||||||||||| ||||||||||||    
T  40716308 ttaacatgtgcaatattgcacatgttagataaa 40716276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 47457588 - 47457640
Alignment:
Q  164 ttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaatc 216  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| |||||    
T  47457588 ttactacttttagttgttttaacatgtgcaatattgcacatgttagacaaatc 47457640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 39475905 - 39475840
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaatctatataa 223  Q
    |||| ||||||||| ||| ||||||||||||||||||| ||||| |||||||| ||||| ||||||    
T  39475905 aaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagagaaatccatataa 39475840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 19868165 - 19868119
Alignment:
Q  164 ttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||||||| |||| |||||||||||||||||||| ||||||||    
T  19868165 ttactacttttagttgtcttaacatgtgcaatattgcacatgttaga 19868119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 7170064 - 7170008
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||| ||||||| ||||| |||  |||||||||||||||||||| ||||||||    
T  7170064 caataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttaga 7170008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 19889402 - 19889346
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||| ||||||||||||| |||  |||||||||||||||||||| ||||||||    
T  19889402 caatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttaga 19889346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 25709516 - 25709572
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    ||||||||  |||||||||||| ||| |||||||||||||||||| || ||||||||    
T  25709516 caataaaaaattactacttttagttgatttaacatgtgcaatatttcacatgttaga 25709572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 4969823 - 4969778
Alignment:
Q  165 tactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    ||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  4969823 tactactattagttgttttaacatgtgcaatgttgcacatgttaga 4969778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 12086056 - 12086125
Alignment:
Q  163 gttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaatctatataaaaattggat 232  Q
    ||||||||||||| |||  ||||||||||||||||| || |||||||| ||| || | ||||||| ||||    
T  12086056 gttactacttttagttgccttaacatgtgcaatattacacatgttagacaaacctttttaaaaataggat 12086125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 36548576 - 36548637
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaat 215  Q
    ||||||||  |||||||||||| ||   |||||||||||||||||||| |||||||| ||||    
T  36548576 caataaaaaattactacttttagttcccttaacatgtgcaatattgcacatgttagacaaat 36548637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 4161939 - 4161887
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||||||||||||| ||  |||||||||||||||||| || ||||||||    
T  4161939 aaaaagttactacttttagttcctttaacatgtgcaatattacacatgttaga 4161887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 9332023 - 9331967
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||| ||||||||||||| ||   |||||||||||||||||||| ||||||||    
T  9332023 caatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttaga 9331967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 31066854 - 31066894
Alignment:
Q  155 aataaaatgttactacttttaattgttttaacatgtgcaat 195  Q
    ||||||| ||||||||||||| || ||||||||||||||||    
T  31066854 aataaaaagttactacttttacttattttaacatgtgcaat 31066894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 32117848 - 32117816
Alignment:
Q  182 ttaacatgtgcaatattgcaaatgttagataaa 214  Q
    |||||||||||||||||||| ||||||||||||    
T  32117848 ttaacatgtgcaatattgcacatgttagataaa 32117816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 39869184 - 39869128
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||| ||||||| ||||| ||  ||||||||||||||||||||| ||||||||    
T  39869184 caatgaaaagttactatttttagtttctttaacatgtgcaatattgcatatgttaga 39869128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 45501516 - 45501464
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||||||||| ||| || |||||||||||||||| ||||| ||||||||    
T  45501516 aaaaagttactactattagttattttaacatgtgcaatgttgcacatgttaga 45501464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 43806422 - 43806365
Alignment:
Q  153 ccaataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| |||| ||||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  43806422 ccaagaaaaagttactactattaattgttttaacatgtgcaatgttgcacatgttaga 43806365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 12919482 - 12919529
Alignment:
Q  168 tacttttaattgttttaacatgtgcaatattgcaaatgttagataaat 215  Q
    |||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  12919482 tacttttaattgctttaacatgtgcaatattgcacatgttagacaaat 12919529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 7720172 - 7720114
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaatc 216  Q
    |||| ||||||||| ||| ||||||||||||||||||| ||||| |||||||| |||||    
T  7720172 aaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaatc 7720114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 36909506 - 36909548
Alignment:
Q  168 tacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  36909506 tacttttaattgttttaacatgtgtaatattgcatatgttaga 36909548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 12016728 - 12016672
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||| ||||||||||||| ||   |||||||||||||||||||| ||||||||    
T  12016728 caataaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttaga 12016672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 14377486 - 14377430
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||| ||||||||||||| |||  ||||||||||||||||||||  |||||||    
T  14377486 caataaaaagttactacttttagttgccttaacatgtgcaatattgcacgtgttaga 14377430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 15411739 - 15411795
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    ||||||||  |||||||||||| ||  ||||||||||||||||||||| ||||||||    
T  15411739 caataaaaaattactacttttagttactttaacatgtgcaatattgcacatgttaga 15411795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 26003612 - 26003664
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  26003612 aaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 26003664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 27665160 - 27665216
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||| ||||||||||||| |||  |||||||||||||||||||| ||||||||    
T  27665160 caatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttaga 27665216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 40503112 - 40503160
Alignment:
Q  168 tacttttaattgttttaacatgtgcaatattgcaaatgttagataaatc 216  Q
    |||||||||||||||||| |||||  |||||||| ||||||||||||||    
T  40503112 tacttttaattgttttaatatgtgtgatattgcatatgttagataaatc 40503160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 16755033 - 16754976
Alignment:
Q  153 ccaataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| |||| ||||||||| ||| |||||||||||| |||||| ||||| ||||||||    
T  16755033 ccaaaaaaaagttactactattagttgttttaacatttgcaatgttgcacatgttaga 16754976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 210
Target Start/End: Original strand, 29981364 - 29981397
Alignment:
Q  177 ttgttttaacatgtgcaatattgcaaatgttaga 210  Q
    ||||||||||||||||||||||||| ||||||||    
T  29981364 ttgttttaacatgtgcaatattgcatatgttaga 29981397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 16919274 - 16919326
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||||||||||||| ||   |||||||||||||||||||| ||||||||    
T  16919274 aaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttaga 16919326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 19228487 - 19228431
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||| ||||||||||||| ||   |||||||||||||||||||| ||||||||    
T  19228487 caatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttaga 19228431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 22162193 - 22162237
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatatt 198  Q
    |||||||| ||||||||||||| |||  |||||||||||||||||    
T  22162193 caataaaaagttactacttttagttgccttaacatgtgcaatatt 22162237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 22705516 - 22705460
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||| ||||||||||||| ||   |||||||||||||||||||| ||||||||    
T  22705516 caatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttaga 22705460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 39904164 - 39904220
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||| ||||||||||||| ||   |||||||||||||||||||| ||||||||    
T  39904164 caatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttaga 39904220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 40562194 - 40562254
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaa 214  Q
    ||||||||  ||||| ||||||| |  |||||||||| |||||||||||||| ||||||||    
T  40562194 caataaaaacttactgcttttaactactttaacatgtacaatattgcaaatggtagataaa 40562254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000008; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 17596370 - 17596318
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||||||||||||| |||| |||||||||||||||||||| ||||||||    
T  17596370 aaaaagttactacttttagttgtcttaacatgtgcaatattgcacatgttaga 17596318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 34692416 - 34692359
Alignment:
Q  153 ccaataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| |||| ||||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  34692416 ccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 34692359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 1814912 - 1814954
Alignment:
Q  168 tacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||| ||| ||||||||||||||||||||| ||||||||    
T  1814912 tacttttagttgctttaacatgtgcaatattgcacatgttaga 1814954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 12454127 - 12454073
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgtta 208  Q
    ||||||||  ||||||| ||||||| | |||||||||||||||||||| ||||||    
T  12454127 caataaaaaattactacatttaattttcttaacatgtgcaatattgcacatgtta 12454073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 5363009 - 5363065
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||| ||||||||||||| ||   |||||||||||||||||||| ||||||||    
T  5363009 caatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttaga 5363065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 14228242 - 14228298
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    ||||||||  || ||||||||||||   |||||||||||||||||||| ||||||||    
T  14228242 caataaaaacttgctacttttaattaccttaacatgtgcaatattgcacatgttaga 14228298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 24979270 - 24979322
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||||||| | ||| ||||||||||||||||||| ||||| ||||||||    
T  24979270 aaaaagttactattattagttgttttaacatgtgcaatgttgcacatgttaga 24979322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 28943885 - 28943941
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    ||||||||  || ||||||||||||   |||||||||||||||||||| ||||||||    
T  28943885 caataaaaacttgctacttttaattaccttaacatgtgcaatattgcacatgttaga 28943941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 30623383 - 30623331
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||||||||| ||| ||||||||||||||| ||| ||||| ||||||||    
T  30623383 aaaaagttactactattagttgttttaacatgtgtaatgttgcacatgttaga 30623331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000008; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 2379186 - 2379238
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgt 206  Q
    ||||||||  |||||||||||| ||||||||||||||||||||||||| ||||    
T  2379186 caataaaaacttactacttttagttgttttaacatgtgcaatattgcacatgt 2379238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 37444208 - 37444152
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||| ||||||||||||| |||  |||||||||||||||||||| ||||||||    
T  37444208 caataaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttaga 37444152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 28992903 - 28992937
Alignment:
Q  163 gttactacttttaattgttttaacatgtgcaatat 197  Q
    |||||||||||||||||||||||||||||||||||    
T  28992903 gttactacttttaattgttttaacatgtgcaatat 28992937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 32553428 - 32553362
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaatctata 220  Q
    |||| ||| ||||||||||||||||   |||||||||| ||||||||| |||||||||||| |||||    
T  32553428 caatgaaaagttactacttttaattaccttaacatgtgtaatattgcacatgttagataaacctata 32553362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 35415148 - 35415198
Alignment:
Q  164 ttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaa 214  Q
    |||||| ||||| |||||||||||||||||||| |||| ||||||||||||    
T  35415148 ttactatttttagttgttttaacatgtgcaataatgcacatgttagataaa 35415198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 42180114 - 42180057
Alignment:
Q  153 ccaataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| |||| ||||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  42180114 ccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 42180057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 54527822 - 54527879
Alignment:
Q  153 ccaataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| |||| ||||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  54527822 ccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 54527879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 11610976 - 11610920
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||| ||||||||||||| |||  |||||||||||||||||||| ||||||||    
T  11610976 caatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttaga 11610920  T

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Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 27549595 - 27549543
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||| || |||||    
T  27549595 aaaatattactacttttagttgttttaacatgtgcaatgttgcacatattaga 27549543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 51618095 - 51618055
Alignment:
Q  170 cttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  51618095 cttttagttgttttaacatgtgcaatattgcacatgttaga 51618055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 39365257 - 39365304
Alignment:
Q  163 gttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    ||||||||||||| | | ||||||||||||||||||||| ||||||||    
T  39365257 gttactacttttagtagctttaacatgtgcaatattgcacatgttaga 39365304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 214
Target Start/End: Original strand, 8497554 - 8497600
Alignment:
Q  168 tacttttaattgttttaacatgtgcaatattgcaaatgttagataaa 214  Q
    |||||||| ||||||||||||||||||| ||||| |||||| |||||    
T  8497554 tacttttagttgttttaacatgtgcaatgttgcacatgttaaataaa 8497600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 50204454 - 50204408
Alignment:
Q  164 ttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  50204454 ttactactattagttgttttaacatgtgcaatgttgcacatgttaga 50204408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 45983564 - 45983510
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaa 214  Q
    |||| ||||||||| ||||||||||||||||||  ||| ||||| ||||||||||||    
T  45983564 aaaaagttactactattaattgttttaacatgt--aatgttgcacatgttagataaa 45983510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 20938118 - 20938062
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||| |||| |||||||| ||   |||||||||||||||||||| ||||||||    
T  20938118 caataaaaagttattacttttagttaccttaacatgtgcaatattgcacatgttaga 20938062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 47386983 - 47386927
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    ||||||||  |||||||||||| ||| ||||| ||| ||||||||||| ||||||||    
T  47386983 caataaaaacttactacttttagttgctttaatatgcgcaatattgcacatgttaga 47386927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 51567939 - 51567991
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||||||||| ||| ||||||||||||||||||| ||||  ||||||||    
T  51567939 aaaaagttactactattagttgttttaacatgtgcaatgttgcgcatgttaga 51567991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 54621344 - 54621396
Alignment:
Q  164 ttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaatc 216  Q
    |||||||||||||||   ||||||| |||||||||||| |||||||| |||||    
T  54621344 ttactacttttaattaccttaacatatgcaatattgcacatgttagacaaatc 54621396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 216
Target Start/End: Original strand, 94135 - 94197
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaatc 216  Q
    ||||||||  |||||||||||| ||| ||||||||||||||| ||||| |||||||| |||||    
T  94135 caataaaaacttactacttttagttgatttaacatgtgcaatgttgcatatgttagacaaatc 94197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 13774 - 13831
Alignment:
Q  153 ccaataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| |||| ||||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  13774 ccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 13831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000005; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 3398282 - 3398225
Alignment:
Q  153 ccaataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| |||| ||||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  3398282 ccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 3398225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 18841821 - 18841878
Alignment:
Q  153 ccaataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| |||| ||||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  18841821 ccaaaaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 18841878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 8103696 - 8103752
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||| ||||||| ||||| |||  |||||||||||||||||||| ||||||||    
T  8103696 caataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttaga 8103752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 11636793 - 11636737
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||| ||||||||||||| ||  ||||||||||||||||||||| ||||||||    
T  11636793 caatgaaaagttactacttttagtttctttaacatgtgcaatattgcacatgttaga 11636737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 11692758 - 11692810
Alignment:
Q  164 ttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaatc 216  Q
    |||||||||||| || |||||||||||||||||||| | |||||||| |||||    
T  11692758 ttactacttttagttattttaacatgtgcaatattgtacatgttagacaaatc 11692810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 24014818 - 24014870
Alignment:
Q  168 tacttttaattgttttaacatgtgcaatattgcaaatgttagataaatctata 220  Q
    |||||||| ||||||||||||||||||| ||||| |||||||| ||| |||||    
T  24014818 tacttttagttgttttaacatgtgcaatgttgcacatgttagacaaacctata 24014870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 11376021 - 11375974
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgca 201  Q
    |||| ||| ||||||||||||| ||| |||||||||||||||||||||    
T  11376021 caatgaaaagttactacttttagttgctttaacatgtgcaatattgca 11375974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 29855995 - 29856042
Alignment:
Q  163 gttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    ||||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  29855995 gttactactattagttgttttaacatgtgcaatgttgcacatgttaga 29856042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 208
Target Start/End: Complemental strand, 33072727 - 33072684
Alignment:
Q  165 tactacttttaattgttttaacatgtgcaatattgcaaatgtta 208  Q
    ||||||||||| ||| ||||||||||||||||||||| ||||||    
T  33072727 tactacttttagttgatttaacatgtgcaatattgcacatgtta 33072684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 11360237 - 11360187
Alignment:
Q  164 ttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaa 214  Q
    |||||||||||| ||||||||||||||| ||||||| | |||||| |||||    
T  11360237 ttactacttttagttgttttaacatgtgtaatattgaacatgttaaataaa 11360187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 23995552 - 23995594
Alignment:
Q  168 tacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||||||  ||||||||||||||||||||| ||||||||    
T  23995552 tacttttaatttatttaacatgtgcaatattgcatatgttaga 23995594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 3737996 - 3738053
Alignment:
Q  158 aaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttagataaat 215  Q
    |||| ||||||||| ||| ||||||||||||||||||| ||||| || ||||| ||||    
T  3737996 aaaaagttactactattagttgttttaacatgtgcaatgttgcacatattagacaaat 3738053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 11250086 - 11250127
Alignment:
Q  167 ctacttttaattgttttaacatgtgcaatattgcaaatgtta 208  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||    
T  11250086 ctacttttagttgctttaacatgtgcaatattgcacatgtta 11250127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 26376685 - 26376742
Alignment:
Q  153 ccaataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| |||| ||||||||| ||| |||||||||||||| |||| ||||| ||||||||    
T  26376685 ccaagaaaaagttactactattatttgttttaacatgtacaatgttgcacatgttaga 26376742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 2795585 - 2795529
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||| ||||||||||||| ||   |||||||||||||||||||| ||||||||    
T  2795585 caatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttaga 2795529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 28378756 - 28378708
Alignment:
Q  169 acttttaattgttttaacatgtgcaatattgcaaatgttagataaatct 217  Q
    ||||||||||  ||||||||||||||||||||| ||| |||| ||||||    
T  28378756 acttttaattactttaacatgtgcaatattgcacatgctagacaaatct 28378708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 30328455 - 30328499
Alignment:
Q  166 actacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||||||||| || | |||||||||||||||||||| ||||||||    
T  30328455 actacttttagttatcttaacatgtgcaatattgcacatgttaga 30328499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 208
Target Start/End: Complemental strand, 492 - 449
Alignment:
Q  165 tactacttttaattgttttaacatgtgcaatattgcaaatgtta 208  Q
    ||||||||||| ||| ||||||||||||||||||||| ||||||    
T  492 tactacttttagttgatttaacatgtgcaatattgcacatgtta 449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 44394 - 44431
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtg 191  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  44394 caataaaaatttactacttttaattgttttaacatgtg 44431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 52895 - 52951
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||| ||||||||||||| ||   |||||||||||||||||||| ||||||||    
T  52895 caatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttaga 52951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 145739 - 145683
Alignment:
Q  154 caataaaatgttactacttttaattgttttaacatgtgcaatattgcaaatgttaga 210  Q
    |||| ||| ||||||||||||| ||   |||||||||||||||||||| ||||||||    
T  145739 caatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttaga 145683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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