View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13576_high_12 (Length: 230)
Name: NF13576_high_12
Description: NF13576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13576_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 52833649 - 52833858
Alignment:
| Q |
1 |
agcaactgatcctgtagcagttgctgctgcagcaaatccgccagctccaatgacaggaataatactgcccaacgtaggggctaaagcacctaatccttgg |
100 |
Q |
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| T |
52833649 |
agcaactgatcctgtagcagttgctgctgcagcaaatccgccagctccaatgacaggaataatactgcccaacgtaggggctaaagcacctaatccttgg |
52833748 |
T |
|
| Q |
101 |
gcaattgctggagccgccaagcctgtcataacattcaaataactaagatattgatactatctcacacttgggttcgataaagatatgtgttagatatgca |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52833749 |
gcaattgctggagccgccaagcctgtcataacattcaaataactaagatattgatactatctcacacttgggttcgataaagatatgtgttagatatgca |
52833848 |
T |
|
| Q |
201 |
gatatatacc |
210 |
Q |
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|||||||||| |
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| T |
52833849 |
gatatatacc |
52833858 |
T |
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