View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13578_high_6 (Length: 247)
Name: NF13578_high_6
Description: NF13578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13578_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 43506413 - 43506626
Alignment:
| Q |
16 |
aatatcctcataacacgttcttcacattccttatcttcaaccacgtcattatcatcattaccatctccaccatcattctcataaatcttcacaagcctaa |
115 |
Q |
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| T |
43506413 |
aatatcctcataacacgttcttcacattccttatcttcaaccacgtcattatcatcattaccatctccaccatcattctcataaatcttcacaagcctaa |
43506512 |
T |
|
| Q |
116 |
tctccgcatccttaagtagcttctcataagcttcatgcatctcatctttttgcaaaagctctttataaccacgcttctcattctcaacattttctctaca |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43506513 |
tctccgcatccttaagtagcttctcataagcttcatgcatctcatctttttgcaaaagctctttataaccacgcttctcattctcaacattttctctaca |
43506612 |
T |
|
| Q |
216 |
tttagtttctcttt |
229 |
Q |
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|||||||||||||| |
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| T |
43506613 |
tttagtttctcttt |
43506626 |
T |
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