View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13578_low_3 (Length: 370)
Name: NF13578_low_3
Description: NF13578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13578_low_3 |
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Alignment Details
Target: chr6 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 13 - 353
Target Start/End: Original strand, 32234718 - 32235058
Alignment:
| Q |
13 |
aatatttccaaacaaaattaatagctgctcttaaagcaagaaatagtcaattatcaacaaaataaaataaagaaagagtcaacaccaaataaacatgcta |
112 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32234718 |
aatatttccaaaaaaaattaatagctgctcttaaagcaagaaatagtcaattatcaacaaaataaaataaagaaagagtcaacaccaaataaacatgcta |
32234817 |
T |
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| Q |
113 |
ctataaatgatataaagtcaaaagaaagttatgaatgacaacattttgtgaaataatactagtctattattatgtcagccaaagaatacacctaagcttc |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
32234818 |
ctataaatgatataaagtcaaaagaaagttatgaatgacaacattttgtgaaataatactagtctattattatgtcagccaaagaatacacctatgcttc |
32234917 |
T |
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| Q |
213 |
attggaaacatatttattaggttgcatcttgatttgtatataatatatttgatttgattttccaacttgtttttcttttctttgacaaaacaaaactaaa |
312 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32234918 |
attggaaacatatttattaggttgcatctagatttgtatataatatatttgatttgattttccaacttgtttttcttttctttgacaaaacaaaactaaa |
32235017 |
T |
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| Q |
313 |
ataactaagtatgatgcccataacatgaacaagatggaacc |
353 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
32235018 |
ataactaagtatgatgcccataacatgaacaagatggaacc |
32235058 |
T |
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