View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1357_high_9 (Length: 343)

Name: NF1357_high_9
Description: NF1357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1357_high_9
NF1357_high_9
[»] chr2 (5 HSPs)
chr2 (10-264)||(44474914-44475186)
chr2 (20-65)||(34665934-34665979)
chr2 (20-62)||(5389199-5389241)
chr2 (24-65)||(37909722-37909763)
chr2 (191-240)||(44485347-44485396)
[»] chr5 (3 HSPs)
chr5 (17-65)||(13091277-13091325)
chr5 (23-62)||(22780880-22780919)
chr5 (22-65)||(28332486-28332529)
[»] chr1 (7 HSPs)
chr1 (21-65)||(50239275-50239319)
chr1 (22-65)||(23061366-23061409)
chr1 (22-65)||(35305516-35305559)
chr1 (22-63)||(23057067-23057108)
chr1 (24-65)||(26010943-26010984)
chr1 (24-65)||(51977859-51977900)
chr1 (17-65)||(6519981-6520028)
[»] scaffold0625 (1 HSPs)
scaffold0625 (22-65)||(6265-6308)
[»] chr8 (7 HSPs)
chr8 (22-65)||(34332475-34332518)
chr8 (22-65)||(39170997-39171040)
chr8 (23-65)||(17642437-17642479)
chr8 (20-65)||(946335-946380)
chr8 (24-65)||(23286929-23286970)
chr8 (25-65)||(43485053-43485093)
chr8 (21-65)||(44935262-44935306)
[»] chr7 (4 HSPs)
chr7 (22-65)||(18990452-18990495)
chr7 (22-65)||(30936093-30936136)
chr7 (22-63)||(28327433-28327474)
chr7 (21-65)||(34118834-34118878)
[»] chr4 (4 HSPs)
chr4 (22-65)||(11109595-11109638)
chr4 (23-65)||(46215772-46215814)
chr4 (15-65)||(55722841-55722891)
chr4 (25-65)||(31908806-31908846)
[»] chr3 (6 HSPs)
chr3 (22-65)||(29806373-29806416)
chr3 (23-65)||(11140609-11140651)
chr3 (23-65)||(39629948-39629990)
chr3 (24-65)||(42067943-42067984)
chr3 (21-65)||(4663144-4663188)
chr3 (25-65)||(52082045-52082085)
[»] chr6 (1 HSPs)
chr6 (24-65)||(15383204-15383245)
[»] scaffold0283 (1 HSPs)
scaffold0283 (21-65)||(6602-6646)


Alignment Details
Target: chr2 (Bit Score: 182; Significance: 2e-98; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 44474914 - 44475186
Alignment:
Q  10 aagaatataattagggaacttctaccgtacactcgcaaattaagatgtaccggtacattattattaatgctgagataagtatttatgagagttacagtaa 109  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  44474914 aagaatataattagggatcttctatcgtacactcacaaattaagatgtaacggtacattataattaatgttgagataagtatttatgagagttacagtaa 44475013  T
Q  110 catcttataacatgtttgaact------------------catacttatgaaaacaatttaaactaatttgaaaacacaaatctttattataactttgtt 191  Q
    ||||||||||||||||||||||                  ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44475014 catcttataacatgtttgaactatattttcagcttattcacatgcttatgaaaacaatttaaactaatttgaaaatacaaatctttattataactttgtt 44475113  T
Q  192 ataaaaatagcttagatataaacatgtataaatatgcaacataaggagtatgtaatcttttttctttgaactg 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44475114 ataaaaatagcttagatataaacatgtataaatatgcaacataaggagtatgtaatcttttttctttgaactg 44475186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 34665979 - 34665934
Alignment:
Q  20 ttagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||||| |||||| ||||||||||| |||||||||||    
T  34665979 ttagggaacttctacggtacacccgcaaattaaggtgtaccggtac 34665934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 5389199 - 5389241
Alignment:
Q  20 ttagggaacttctaccgtacactcgcaaattaagatgtaccgg 62  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||    
T  5389199 ttagggaacttctacggtacacccgcaaattaaggtgtaccgg 5389241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 37909763 - 37909722
Alignment:
Q  24 ggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||| |||||| ||||||||||| |||||||||||    
T  37909763 ggaacttctacggtacacccgcaaattaaggtgtaccggtac 37909722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 44485347 - 44485396
Alignment:
Q  191 tataaaaatagcttagatataaacatgtataaatatgcaacataaggagt 240  Q
    ||||||||||||||| ||| | | |||||||||||||||||| |||||||    
T  44485347 tataaaaatagcttatatacagaaatgtataaatatgcaacacaaggagt 44485396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 13091325 - 13091277
Alignment:
Q  17 taattagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||||||||| |||||| || |||||||| |||||||||||    
T  13091325 taattagggaacttctacggtacacccgtaaattaaggtgtaccggtac 13091277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 22780919 - 22780880
Alignment:
Q  23 gggaacttctaccgtacactcgcaaattaagatgtaccgg 62  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  22780919 gggaacttctacggtacacttgcaaattaagatgtaccgg 22780880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 28332529 - 28332486
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| ||||||| |||||||||| |||||||||||    
T  28332529 agggaacttctacggtacacttgcaaattaaggtgtaccggtac 28332486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 50239275 - 50239319
Alignment:
Q  21 tagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||||| |||||| ||||||||||| |||||||||||    
T  50239275 tagggaacttctacggtacacccgcaaattaaggtgtaccggtac 50239319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 23061409 - 23061366
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||    
T  23061409 agggaacttctacggtacacccgcaaattaaggtgtaccggtac 23061366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 35305559 - 35305516
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||    
T  35305559 agggaacttctacggtacactcgtaaattaaggtgtaccggtac 35305516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 23057108 - 23057067
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggt 63  Q
    ||||||||||||| |||||| ||||||||||| |||||||||    
T  23057108 agggaacttctacggtacacccgcaaattaaggtgtaccggt 23057067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 26010943 - 26010984
Alignment:
Q  24 ggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||| |||||| ||||||||||| |||||||||||    
T  26010943 ggaacttctacggtacacccgcaaattaaggtgtaccggtac 26010984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 51977859 - 51977900
Alignment:
Q  24 ggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||| |||||| ||||||||||| |||||||||||    
T  51977859 ggaacttctacggtacacccgcaaattaaggtgtaccggtac 51977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 6519981 - 6520028
Alignment:
Q  17 taattagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||| ||||||||||||| |||||| ||||||||||| |||||||||||    
T  6519981 taataagggaacttctacggtacac-cgcaaattaaggtgtaccggtac 6520028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 6265 - 6308
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||    
T  6265 agggaacttctacggtacacccgcaaattaaggtgtaccggtac 6308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000008; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 34332518 - 34332475
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||    
T  34332518 agggaacttctacggtacacccgcaaattaaggtgtaccggtac 34332475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 39170997 - 39171040
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||    
T  39170997 agggaacttctacggtacacccgcaaattaaggtgtaccggtac 39171040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 17642479 - 17642437
Alignment:
Q  23 gggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||| |||||| ||||||||||| |||||||||||    
T  17642479 gggaacttctacggtacacccgcaaattaaggtgtaccggtac 17642437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 946380 - 946335
Alignment:
Q  20 ttagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||||| |||||| ||||||||| | |||||||||||    
T  946380 ttagggaacttctacggtacacccgcaaattacggtgtaccggtac 946335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 23286970 - 23286929
Alignment:
Q  24 ggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||| |||||| ||||||||||| |||||||||||    
T  23286970 ggaacttctacggtacacccgcaaattaaggtgtaccggtac 23286929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 43485053 - 43485093
Alignment:
Q  25 gaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||| |||||| ||||||||||| |||||||||||    
T  43485053 gaacttctacggtacacccgcaaattaaggtgtaccggtac 43485093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 44935306 - 44935262
Alignment:
Q  21 tagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||||| |||||| ||||| ||||| |||||||||||    
T  44935306 tagggaacttctacggtacacccgcaatttaaggtgtaccggtac 44935262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000008; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 18990495 - 18990452
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||    
T  18990495 agggaacttctacggtacacccgcaaattaaggtgtaccggtac 18990452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 30936093 - 30936136
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||    
T  30936093 agggaacttctacggtacacccgcaaattaaggtgtaccggtac 30936136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 28327474 - 28327433
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggt 63  Q
    ||||||||||||| |||||| ||||||||||| |||||||||    
T  28327474 agggaacttctacggtacacccgcaaattaagctgtaccggt 28327433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 34118878 - 34118834
Alignment:
Q  21 tagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||||| |||||| ||||||||||| ||||| |||||    
T  34118878 tagggaacttctacggtacacccgcaaattaaggtgtactggtac 34118834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000008; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 11109595 - 11109638
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||    
T  11109595 agggaacttctacggtacacccgcaaattaaggtgtaccggtac 11109638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 46215772 - 46215814
Alignment:
Q  23 gggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||| |||||||||||||||||  |||||||||||    
T  46215772 gggaacttctacggtacactcgcaaattaatgtgtaccggtac 46215814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 55722891 - 55722841
Alignment:
Q  15 tataattagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||| ||||||||||| ||| |||||| ||||||||||| |||||||||||    
T  55722891 tatatttagggaacttttacggtacacccgcaaattaaggtgtaccggtac 55722841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 31908846 - 31908806
Alignment:
Q  25 gaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||| |||||| ||||||||||| |||||||||||    
T  31908846 gaacttctacggtacacccgcaaattaaggtgtaccggtac 31908806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000008; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 29806416 - 29806373
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| ||||||||||||||| || |||||||||||    
T  29806416 agggaacttctacggtacactcgcaaattgaggtgtaccggtac 29806373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 11140651 - 11140609
Alignment:
Q  23 gggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||| |||||| ||||||||||| |||||||||||    
T  11140651 gggaacttctacggtacacccgcaaattaaggtgtaccggtac 11140609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 39629948 - 39629990
Alignment:
Q  23 gggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||| |||||  |||||||||||||||||||||||    
T  39629948 gggaacttctacggtacatccgcaaattaagatgtaccggtac 39629990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 42067984 - 42067943
Alignment:
Q  24 ggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||| |||||| ||||||||||| |||||||||||    
T  42067984 ggaacttctacggtacacccgcaaattaaggtgtaccggtac 42067943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 4663144 - 4663188
Alignment:
Q  21 tagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||||| |||||  ||||||||||| |||||||||||    
T  4663144 tagggaacttctacggtacatccgcaaattaaggtgtaccggtac 4663188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 52082045 - 52082085
Alignment:
Q  25 gaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||| |||||| ||||||||||| |||||||||||    
T  52082045 gaacttctacggtacacccgcaaattaaggtgtaccggtac 52082085  T

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Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 15383204 - 15383245
Alignment:
Q  24 ggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||| |||||| ||||||||||| |||||||||||    
T  15383204 ggaacttctacggtacacccgcaaattaaggtgtaccggtac 15383245  T

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Target: scaffold0283 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 6646 - 6602
Alignment:
Q  21 tagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||||| |||||| ||||| ||||| |||||||||||    
T  6646 tagggaacttctacggtacacccgcaatttaaggtgtaccggtac 6602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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