View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1357_low_16 (Length: 343)

Name: NF1357_low_16
Description: NF1357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1357_low_16
NF1357_low_16
[»] chr2 (5 HSPs)
chr2 (10-264)||(44474914-44475186)
chr2 (20-65)||(34665934-34665979)
chr2 (20-62)||(5389199-5389241)
chr2 (24-65)||(37909722-37909763)
chr2 (191-240)||(44485347-44485396)
[»] chr5 (3 HSPs)
chr5 (17-65)||(13091277-13091325)
chr5 (23-62)||(22780880-22780919)
chr5 (22-65)||(28332486-28332529)
[»] chr1 (7 HSPs)
chr1 (21-65)||(50239275-50239319)
chr1 (22-65)||(23061366-23061409)
chr1 (22-65)||(35305516-35305559)
chr1 (22-63)||(23057067-23057108)
chr1 (24-65)||(26010943-26010984)
chr1 (24-65)||(51977859-51977900)
chr1 (17-65)||(6519981-6520028)
[»] scaffold0625 (1 HSPs)
scaffold0625 (22-65)||(6265-6308)
[»] chr8 (7 HSPs)
chr8 (22-65)||(34332475-34332518)
chr8 (22-65)||(39170997-39171040)
chr8 (23-65)||(17642437-17642479)
chr8 (20-65)||(946335-946380)
chr8 (24-65)||(23286929-23286970)
chr8 (25-65)||(43485053-43485093)
chr8 (21-65)||(44935262-44935306)
[»] chr7 (4 HSPs)
chr7 (22-65)||(18990452-18990495)
chr7 (22-65)||(30936093-30936136)
chr7 (22-63)||(28327433-28327474)
chr7 (21-65)||(34118834-34118878)
[»] chr4 (4 HSPs)
chr4 (22-65)||(11109595-11109638)
chr4 (23-65)||(46215772-46215814)
chr4 (15-65)||(55722841-55722891)
chr4 (25-65)||(31908806-31908846)
[»] chr3 (6 HSPs)
chr3 (22-65)||(29806373-29806416)
chr3 (23-65)||(11140609-11140651)
chr3 (23-65)||(39629948-39629990)
chr3 (24-65)||(42067943-42067984)
chr3 (21-65)||(4663144-4663188)
chr3 (25-65)||(52082045-52082085)
[»] chr6 (1 HSPs)
chr6 (24-65)||(15383204-15383245)
[»] scaffold0283 (1 HSPs)
scaffold0283 (21-65)||(6602-6646)


Alignment Details
Target: chr2 (Bit Score: 182; Significance: 2e-98; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 44474914 - 44475186
Alignment:
Q  10 aagaatataattagggaacttctaccgtacactcgcaaattaagatgtaccggtacattattattaatgctgagataagtatttatgagagttacagtaa 109  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  44474914 aagaatataattagggatcttctatcgtacactcacaaattaagatgtaacggtacattataattaatgttgagataagtatttatgagagttacagtaa 44475013  T
Q  110 catcttataacatgtttgaact------------------catacttatgaaaacaatttaaactaatttgaaaacacaaatctttattataactttgtt 191  Q
    ||||||||||||||||||||||                  ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44475014 catcttataacatgtttgaactatattttcagcttattcacatgcttatgaaaacaatttaaactaatttgaaaatacaaatctttattataactttgtt 44475113  T
Q  192 ataaaaatagcttagatataaacatgtataaatatgcaacataaggagtatgtaatcttttttctttgaactg 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44475114 ataaaaatagcttagatataaacatgtataaatatgcaacataaggagtatgtaatcttttttctttgaactg 44475186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 34665979 - 34665934
Alignment:
Q  20 ttagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||||| |||||| ||||||||||| |||||||||||    
T  34665979 ttagggaacttctacggtacacccgcaaattaaggtgtaccggtac 34665934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 5389199 - 5389241
Alignment:
Q  20 ttagggaacttctaccgtacactcgcaaattaagatgtaccgg 62  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||    
T  5389199 ttagggaacttctacggtacacccgcaaattaaggtgtaccgg 5389241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 37909763 - 37909722
Alignment:
Q  24 ggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||| |||||| ||||||||||| |||||||||||    
T  37909763 ggaacttctacggtacacccgcaaattaaggtgtaccggtac 37909722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 44485347 - 44485396
Alignment:
Q  191 tataaaaatagcttagatataaacatgtataaatatgcaacataaggagt 240  Q
    ||||||||||||||| ||| | | |||||||||||||||||| |||||||    
T  44485347 tataaaaatagcttatatacagaaatgtataaatatgcaacacaaggagt 44485396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 13091325 - 13091277
Alignment:
Q  17 taattagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||||||||| |||||| || |||||||| |||||||||||    
T  13091325 taattagggaacttctacggtacacccgtaaattaaggtgtaccggtac 13091277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 22780919 - 22780880
Alignment:
Q  23 gggaacttctaccgtacactcgcaaattaagatgtaccgg 62  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  22780919 gggaacttctacggtacacttgcaaattaagatgtaccgg 22780880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 28332529 - 28332486
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| ||||||| |||||||||| |||||||||||    
T  28332529 agggaacttctacggtacacttgcaaattaaggtgtaccggtac 28332486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 50239275 - 50239319
Alignment:
Q  21 tagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||||| |||||| ||||||||||| |||||||||||    
T  50239275 tagggaacttctacggtacacccgcaaattaaggtgtaccggtac 50239319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 23061409 - 23061366
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||    
T  23061409 agggaacttctacggtacacccgcaaattaaggtgtaccggtac 23061366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 35305559 - 35305516
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||    
T  35305559 agggaacttctacggtacactcgtaaattaaggtgtaccggtac 35305516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 23057108 - 23057067
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggt 63  Q
    ||||||||||||| |||||| ||||||||||| |||||||||    
T  23057108 agggaacttctacggtacacccgcaaattaaggtgtaccggt 23057067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 26010943 - 26010984
Alignment:
Q  24 ggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||| |||||| ||||||||||| |||||||||||    
T  26010943 ggaacttctacggtacacccgcaaattaaggtgtaccggtac 26010984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 51977859 - 51977900
Alignment:
Q  24 ggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||| |||||| ||||||||||| |||||||||||    
T  51977859 ggaacttctacggtacacccgcaaattaaggtgtaccggtac 51977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 6519981 - 6520028
Alignment:
Q  17 taattagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||| ||||||||||||| |||||| ||||||||||| |||||||||||    
T  6519981 taataagggaacttctacggtacac-cgcaaattaaggtgtaccggtac 6520028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 6265 - 6308
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||    
T  6265 agggaacttctacggtacacccgcaaattaaggtgtaccggtac 6308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000008; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 34332518 - 34332475
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||    
T  34332518 agggaacttctacggtacacccgcaaattaaggtgtaccggtac 34332475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 39170997 - 39171040
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||    
T  39170997 agggaacttctacggtacacccgcaaattaaggtgtaccggtac 39171040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 17642479 - 17642437
Alignment:
Q  23 gggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||| |||||| ||||||||||| |||||||||||    
T  17642479 gggaacttctacggtacacccgcaaattaaggtgtaccggtac 17642437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 946380 - 946335
Alignment:
Q  20 ttagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||||| |||||| ||||||||| | |||||||||||    
T  946380 ttagggaacttctacggtacacccgcaaattacggtgtaccggtac 946335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 23286970 - 23286929
Alignment:
Q  24 ggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||| |||||| ||||||||||| |||||||||||    
T  23286970 ggaacttctacggtacacccgcaaattaaggtgtaccggtac 23286929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 43485053 - 43485093
Alignment:
Q  25 gaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||| |||||| ||||||||||| |||||||||||    
T  43485053 gaacttctacggtacacccgcaaattaaggtgtaccggtac 43485093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 44935306 - 44935262
Alignment:
Q  21 tagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||||| |||||| ||||| ||||| |||||||||||    
T  44935306 tagggaacttctacggtacacccgcaatttaaggtgtaccggtac 44935262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000008; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 18990495 - 18990452
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||    
T  18990495 agggaacttctacggtacacccgcaaattaaggtgtaccggtac 18990452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 30936093 - 30936136
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||    
T  30936093 agggaacttctacggtacacccgcaaattaaggtgtaccggtac 30936136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 28327474 - 28327433
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggt 63  Q
    ||||||||||||| |||||| ||||||||||| |||||||||    
T  28327474 agggaacttctacggtacacccgcaaattaagctgtaccggt 28327433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 34118878 - 34118834
Alignment:
Q  21 tagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||||| |||||| ||||||||||| ||||| |||||    
T  34118878 tagggaacttctacggtacacccgcaaattaaggtgtactggtac 34118834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000008; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 11109595 - 11109638
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||    
T  11109595 agggaacttctacggtacacccgcaaattaaggtgtaccggtac 11109638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 46215772 - 46215814
Alignment:
Q  23 gggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||| |||||||||||||||||  |||||||||||    
T  46215772 gggaacttctacggtacactcgcaaattaatgtgtaccggtac 46215814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 55722891 - 55722841
Alignment:
Q  15 tataattagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||| ||||||||||| ||| |||||| ||||||||||| |||||||||||    
T  55722891 tatatttagggaacttttacggtacacccgcaaattaaggtgtaccggtac 55722841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 31908846 - 31908806
Alignment:
Q  25 gaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||| |||||| ||||||||||| |||||||||||    
T  31908846 gaacttctacggtacacccgcaaattaaggtgtaccggtac 31908806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000008; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 29806416 - 29806373
Alignment:
Q  22 agggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||||| ||||||||||||||| || |||||||||||    
T  29806416 agggaacttctacggtacactcgcaaattgaggtgtaccggtac 29806373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 11140651 - 11140609
Alignment:
Q  23 gggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||| |||||| ||||||||||| |||||||||||    
T  11140651 gggaacttctacggtacacccgcaaattaaggtgtaccggtac 11140609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 39629948 - 39629990
Alignment:
Q  23 gggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||| |||||  |||||||||||||||||||||||    
T  39629948 gggaacttctacggtacatccgcaaattaagatgtaccggtac 39629990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 42067984 - 42067943
Alignment:
Q  24 ggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||| |||||| ||||||||||| |||||||||||    
T  42067984 ggaacttctacggtacacccgcaaattaaggtgtaccggtac 42067943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 4663144 - 4663188
Alignment:
Q  21 tagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||||| |||||  ||||||||||| |||||||||||    
T  4663144 tagggaacttctacggtacatccgcaaattaaggtgtaccggtac 4663188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 52082045 - 52082085
Alignment:
Q  25 gaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||| |||||| ||||||||||| |||||||||||    
T  52082045 gaacttctacggtacacccgcaaattaaggtgtaccggtac 52082085  T

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Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 15383204 - 15383245
Alignment:
Q  24 ggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    ||||||||||| |||||| ||||||||||| |||||||||||    
T  15383204 ggaacttctacggtacacccgcaaattaaggtgtaccggtac 15383245  T

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Target: scaffold0283 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 6646 - 6602
Alignment:
Q  21 tagggaacttctaccgtacactcgcaaattaagatgtaccggtac 65  Q
    |||||||||||||| |||||| ||||| ||||| |||||||||||    
T  6646 tagggaacttctacggtacacccgcaatttaaggtgtaccggtac 6602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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