View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13581_low_8 (Length: 237)
Name: NF13581_low_8
Description: NF13581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13581_low_8 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 42738219 - 42738438
Alignment:
| Q |
18 |
acacagatcccaagtggtttcaaggacatgttcgtataagtcaactaaaaatgtaagcatcaagatttcccacttgcatggggattgtcaagttcagctg |
117 |
Q |
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| T |
42738219 |
acacagatcccaagtggtttcaaggacatgttcgtataagtcaactaaaaatgtaagtatcaagatttcccacttgcatggggattgtcaagttcagctg |
42738318 |
T |
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| Q |
118 |
gtttgatatttgcttcaattattcaatttaaaaaacaagataacatcgaaatgaacaagcctgttcatattggttgactcaaagttggtacgcaaaaata |
217 |
Q |
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| T |
42738319 |
gtttgatatttgcttcaattattcaatttaaaaaacaagataacatcgaaatgaacaagcctgttcatattggttgactcaaagttggtacgcaaaaata |
42738418 |
T |
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| Q |
218 |
agtcaatagcatcatttttc |
237 |
Q |
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|||||||||||||||||||| |
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| T |
42738419 |
agtcaatagcatcatttttc |
42738438 |
T |
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