View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13583_high_17 (Length: 258)
Name: NF13583_high_17
Description: NF13583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13583_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 39601251 - 39601479
Alignment:
| Q |
23 |
aatttccacccaaatggcttctgggtttgcactgtgttgttgaggagagagcaatgctcttgtgaaagtggcgagggaaaaagagactcaaagataaata |
122 |
Q |
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| T |
39601251 |
aatttccacccaaatggcttctgggtttgcactgtgttgttgaggagagagcaatgctcttgtgaaagtggcgagggaaaaagagactcaaagataaaaa |
39601350 |
T |
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| Q |
123 |
tgatggtttggaatgtagggaagagtgtagagaaagtgggttagctcttgaagaagaagctctgcaagcagtgatcattgaagtaagtgtgagtgtgtga |
222 |
Q |
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| T |
39601351 |
tgatggtttggaatgtagggaagagcgtagagaaagtgggttagctcttgaagaagaagctctgcaagcagtgatcattgaagtaagtgtgagtgtgtga |
39601450 |
T |
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| Q |
223 |
agacgaagctgagttgttgttgatgatgt |
251 |
Q |
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| T |
39601451 |
agacgaagctgagttgttgttgatgatgt |
39601479 |
T |
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