View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13583_high_4 (Length: 519)

Name: NF13583_high_4
Description: NF13583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13583_high_4
NF13583_high_4
[»] chr3 (37 HSPs)
chr3 (9-492)||(32768282-32768764)
chr3 (373-493)||(19906815-19906933)
chr3 (316-493)||(31882936-31883111)
chr3 (337-493)||(3964305-3964459)
chr3 (316-485)||(24571277-24571444)
chr3 (316-493)||(33364692-33364867)
chr3 (313-493)||(3864589-3864766)
chr3 (373-493)||(3867563-3867681)
chr3 (313-426)||(8648536-8648649)
chr3 (373-472)||(34351303-34351400)
chr3 (239-493)||(51925122-51925372)
chr3 (337-503)||(21373947-21374111)
chr3 (316-493)||(54622711-54622885)
chr3 (316-493)||(12349085-12349260)
chr3 (316-485)||(38213350-38213517)
chr3 (316-485)||(40094499-40094666)
chr3 (373-485)||(25860343-25860453)
chr3 (337-485)||(29584892-29585038)
chr3 (316-476)||(39052769-39052927)
chr3 (274-497)||(44000217-44000436)
chr3 (373-493)||(50386370-50386488)
chr3 (313-485)||(51259702-51259872)
chr3 (383-493)||(41682967-41683075)
chr3 (316-485)||(28675786-28675953)
chr3 (316-485)||(47958354-47958521)
chr3 (373-485)||(2135123-2135233)
chr3 (448-497)||(30043743-30043792)
chr3 (316-476)||(49748842-49749000)
chr3 (316-475)||(20609580-20609737)
chr3 (316-485)||(20255041-20255207)
chr3 (316-485)||(42636325-42636492)
chr3 (316-476)||(34026663-34026821)
chr3 (316-486)||(29646062-29646230)
chr3 (316-485)||(1344629-1344796)
chr3 (316-485)||(44116935-44117102)
chr3 (327-424)||(14155442-14155538)
chr3 (316-476)||(51296577-51296735)
[»] chr8 (41 HSPs)
chr8 (327-493)||(10932742-10932905)
chr8 (316-493)||(30542957-30543132)
chr8 (313-493)||(15001459-15001636)
chr8 (316-493)||(41548613-41548788)
chr8 (313-493)||(35225654-35225832)
chr8 (313-485)||(37664226-37664396)
chr8 (313-485)||(8672998-8673168)
chr8 (373-493)||(7591382-7591500)
chr8 (316-476)||(29563178-29563336)
chr8 (373-493)||(29610990-29611108)
chr8 (337-493)||(39642899-39643053)
chr8 (275-493)||(16485744-16485958)
chr8 (373-476)||(31513535-31513636)
chr8 (316-485)||(5968807-5968974)
chr8 (316-485)||(12753268-12753435)
chr8 (373-493)||(37618327-37618445)
chr8 (330-497)||(11944884-11945049)
chr8 (316-485)||(4052475-4052642)
chr8 (316-485)||(10467059-10467226)
chr8 (316-485)||(29672266-29672433)
chr8 (336-493)||(30501160-30501315)
chr8 (373-449)||(10656663-10656739)
chr8 (327-485)||(7394757-7394913)
chr8 (313-475)||(27103951-27104111)
chr8 (383-493)||(37474762-37474870)
chr8 (316-485)||(3251599-3251766)
chr8 (316-485)||(32019944-32020111)
chr8 (316-485)||(34063123-34063290)
chr8 (316-485)||(34101503-34101670)
chr8 (316-485)||(45446450-45446617)
chr8 (393-493)||(22999330-22999428)
chr8 (373-493)||(40389092-40389210)
chr8 (373-485)||(41709829-41709939)
chr8 (373-497)||(45114107-45114229)
chr8 (446-497)||(11926761-11926812)
chr8 (327-473)||(14004999-14005143)
chr8 (337-424)||(21272700-21272787)
chr8 (373-497)||(9624271-9624390)
chr8 (313-419)||(32303592-32303698)
chr8 (337-433)||(3800936-3801032)
chr8 (373-449)||(5892120-5892196)
[»] chr7 (39 HSPs)
chr7 (249-492)||(329404-329643)
chr7 (316-485)||(21784870-21785037)
chr7 (316-485)||(44748694-44748861)
chr7 (316-493)||(9913524-9913698)
chr7 (316-493)||(9927212-9927386)
chr7 (316-485)||(36769498-36769665)
chr7 (373-493)||(1363692-1363810)
chr7 (337-476)||(41211138-41211275)
chr7 (274-424)||(29372767-29372915)
chr7 (316-493)||(38301342-38301516)
chr7 (316-485)||(47953189-47953356)
chr7 (337-485)||(26994154-26994300)
chr7 (337-493)||(34519528-34519682)
chr7 (373-485)||(47316627-47316737)
chr7 (316-475)||(21133371-21133528)
chr7 (316-485)||(10932486-10932653)
chr7 (316-485)||(18386524-18386690)
chr7 (337-419)||(48699418-48699500)
chr7 (373-485)||(11250673-11250783)
chr7 (338-486)||(23349219-23349365)
chr7 (373-493)||(48894773-48894891)
chr7 (316-475)||(40753154-40753311)
chr7 (327-485)||(1870145-1870301)
chr7 (316-431)||(30849227-30849342)
chr7 (316-493)||(20127288-20127463)
chr7 (313-474)||(22724471-22724630)
chr7 (316-485)||(26371738-26371905)
chr7 (373-418)||(9173094-9173139)
chr7 (313-476)||(18470680-18470839)
chr7 (373-485)||(29661379-29661489)
chr7 (373-485)||(43158615-43158725)
chr7 (316-475)||(11321824-11321981)
chr7 (273-424)||(15035241-15035390)
chr7 (313-493)||(34295332-34295503)
chr7 (450-493)||(46448565-46448608)
chr7 (378-424)||(8413263-8413308)
chr7 (373-418)||(9153691-9153736)
chr7 (373-485)||(43189171-43189281)
chr7 (373-476)||(16963194-16963295)
[»] chr1 (47 HSPs)
chr1 (313-493)||(6029296-6029474)
chr1 (373-493)||(7837194-7837312)
chr1 (316-485)||(16386858-16387025)
chr1 (316-493)||(31004136-31004311)
chr1 (239-493)||(11772627-11772877)
chr1 (316-485)||(844727-844894)
chr1 (316-493)||(42512765-42512940)
chr1 (313-493)||(6143981-6144159)
chr1 (373-493)||(13994070-13994188)
chr1 (317-473)||(41967864-41968018)
chr1 (318-485)||(17887954-17888119)
chr1 (316-485)||(6711049-6711216)
chr1 (313-485)||(1351438-1351608)
chr1 (317-493)||(5109734-5109907)
chr1 (313-485)||(32270354-32270524)
chr1 (337-485)||(35387314-35387460)
chr1 (337-485)||(51264520-51264666)
chr1 (373-491)||(7837435-7837551)
chr1 (375-493)||(16704789-16704905)
chr1 (317-494)||(16476149-16476324)
chr1 (328-497)||(26733571-26733738)
chr1 (316-485)||(45490878-45491045)
chr1 (337-485)||(32289347-32289493)
chr1 (373-493)||(50304712-50304830)
chr1 (313-476)||(50382412-50382576)
chr1 (316-475)||(16451131-16451288)
chr1 (336-491)||(39281918-39282071)
chr1 (385-491)||(504388-504492)
chr1 (327-485)||(41972926-41973082)
chr1 (454-497)||(47242507-47242550)
chr1 (316-493)||(26764790-26764965)
chr1 (316-485)||(28340306-28340473)
chr1 (316-485)||(30105683-30105850)
chr1 (373-497)||(6771429-6771551)
chr1 (336-496)||(39792831-39792989)
chr1 (313-485)||(50540345-50540515)
chr1 (454-493)||(7146900-7146939)
chr1 (373-475)||(16437423-16437523)
chr1 (450-493)||(21071750-21071793)
chr1 (316-494)||(42510529-42510705)
chr1 (373-485)||(24339641-24339752)
chr1 (316-485)||(26118218-26118385)
chr1 (373-419)||(34283883-34283929)
chr1 (310-493)||(1601171-1601350)
chr1 (347-424)||(38087058-38087135)
chr1 (454-494)||(17291718-17291758)
chr1 (373-433)||(25539916-25539976)
[»] chr4 (53 HSPs)
chr4 (313-493)||(20802444-20802622)
chr4 (347-493)||(26083368-26083512)
chr4 (313-493)||(3649631-3649809)
chr4 (313-493)||(39078656-39078834)
chr4 (316-476)||(50727843-50728001)
chr4 (316-476)||(50735857-50736015)
chr4 (373-476)||(22318314-22318415)
chr4 (380-474)||(10587097-10587189)
chr4 (316-485)||(33176953-33177120)
chr4 (373-493)||(11056097-11056215)
chr4 (373-493)||(44324255-44324373)
chr4 (373-493)||(50178405-50178523)
chr4 (373-493)||(50729455-50729573)
chr4 (373-496)||(9947984-9948105)
chr4 (373-476)||(42772843-42772944)
chr4 (373-483)||(24210374-24210482)
chr4 (316-473)||(44649097-44649252)
chr4 (316-493)||(47642404-47642579)
chr4 (316-485)||(52949718-52949885)
chr4 (337-497)||(32181282-32181440)
chr4 (373-485)||(36497272-36497382)
chr4 (337-485)||(37865772-37865918)
chr4 (337-485)||(38812539-38812685)
chr4 (313-493)||(56154616-56154794)
chr4 (410-493)||(44640415-44640496)
chr4 (316-485)||(1231309-1231476)
chr4 (316-485)||(4325789-4325956)
chr4 (373-493)||(25978525-25978642)
chr4 (337-485)||(24002358-24002504)
chr4 (337-485)||(36743609-36743755)
chr4 (373-485)||(36885987-36886097)
chr4 (373-493)||(47361327-47361444)
chr4 (374-485)||(42870027-42870136)
chr4 (336-424)||(43739479-43739567)
chr4 (373-476)||(53200573-53200674)
chr4 (336-419)||(21098552-21098635)
chr4 (337-432)||(28115271-28115366)
chr4 (336-485)||(2629872-2630019)
chr4 (316-485)||(2725054-2725220)
chr4 (316-485)||(21202738-21202904)
chr4 (316-485)||(33552763-33552930)
chr4 (316-473)||(55593883-55594038)
chr4 (337-485)||(20517943-20518089)
chr4 (373-473)||(21580081-21580179)
chr4 (373-485)||(46680431-46680541)
chr4 (373-493)||(49152013-49152131)
chr4 (453-497)||(7381387-7381431)
chr4 (450-494)||(9807285-9807329)
chr4 (316-475)||(52319321-52319478)
chr4 (377-428)||(44355830-44355881)
chr4 (373-485)||(41711902-41712012)
chr4 (373-429)||(36705917-36705973)
chr4 (316-424)||(43641097-43641205)
[»] chr2 (37 HSPs)
chr2 (313-476)||(33889235-33889396)
chr2 (327-485)||(32497921-32498077)
chr2 (316-485)||(7761501-7761668)
chr2 (373-493)||(6896220-6896338)
chr2 (373-476)||(32766441-32766542)
chr2 (327-485)||(37308661-37308817)
chr2 (337-485)||(3913388-3913534)
chr2 (337-477)||(5278770-5278908)
chr2 (373-493)||(10399790-10399908)
chr2 (316-476)||(35114780-35114938)
chr2 (78-195)||(35948241-35948358)
chr2 (373-493)||(38623224-38623342)
chr2 (373-485)||(44284681-44284791)
chr2 (336-475)||(41366048-41366185)
chr2 (313-475)||(19513627-19513787)
chr2 (372-431)||(35170193-35170252)
chr2 (316-485)||(9732858-9733025)
chr2 (316-485)||(18685831-18685998)
chr2 (316-485)||(42706354-42706521)
chr2 (336-476)||(7258912-7259050)
chr2 (316-476)||(33366605-33366763)
chr2 (339-485)||(17540733-17540877)
chr2 (373-485)||(30798416-30798527)
chr2 (316-485)||(34338805-34338972)
chr2 (316-493)||(40832389-40832564)
chr2 (449-498)||(17237273-17237322)
chr2 (373-493)||(27462722-27462840)
chr2 (373-493)||(28824477-28824595)
chr2 (313-430)||(41934573-41934690)
chr2 (285-491)||(38992993-38993195)
chr2 (373-424)||(13829490-13829541)
chr2 (339-493)||(26981629-26981781)
chr2 (316-402)||(9717219-9717305)
chr2 (316-402)||(37003877-37003963)
chr2 (454-494)||(83401-83441)
chr2 (373-425)||(37088325-37088377)
chr2 (373-476)||(42365629-42365730)
[»] chr6 (33 HSPs)
chr6 (316-493)||(10485152-10485327)
chr6 (316-493)||(10959995-10960170)
chr6 (337-497)||(14925411-14925569)
chr6 (373-493)||(18597117-18597235)
chr6 (316-485)||(24242659-24242826)
chr6 (327-491)||(9613980-9614142)
chr6 (313-493)||(9902617-9902795)
chr6 (316-476)||(32409828-32409986)
chr6 (327-485)||(24203368-24203524)
chr6 (316-485)||(3259678-3259845)
chr6 (316-485)||(3932774-3932941)
chr6 (316-485)||(10324078-10324245)
chr6 (316-476)||(15277256-15277414)
chr6 (337-476)||(166899-167036)
chr6 (316-475)||(2614891-2615048)
chr6 (373-475)||(15276914-15277014)
chr6 (373-493)||(3379762-3379880)
chr6 (373-493)||(31870056-31870177)
chr6 (275-493)||(32860007-32860221)
chr6 (454-497)||(14925172-14925215)
chr6 (373-497)||(9200342-9200465)
chr6 (337-494)||(18057535-18057690)
chr6 (316-485)||(32132347-32132514)
chr6 (316-476)||(17867830-17867988)
chr6 (316-476)||(17877613-17877771)
chr6 (316-475)||(34176825-34176982)
chr6 (454-493)||(23636354-23636393)
chr6 (377-432)||(24785111-24785166)
chr6 (67-102)||(27127986-27128021)
chr6 (373-486)||(11675340-11675451)
chr6 (337-494)||(17443278-17443433)
chr6 (347-446)||(34683989-34684086)
chr6 (460-496)||(35004084-35004120)
[»] chr5 (34 HSPs)
chr5 (336-493)||(8560908-8561063)
chr5 (316-494)||(39918502-39918678)
chr5 (316-485)||(7523167-7523334)
chr5 (373-493)||(18470354-18470472)
chr5 (316-473)||(39788187-39788343)
chr5 (316-485)||(41790397-41790563)
chr5 (316-493)||(3735352-3735527)
chr5 (336-493)||(4689624-4689779)
chr5 (310-494)||(2351669-2351851)
chr5 (337-485)||(21739095-21739241)
chr5 (373-473)||(34794939-34795037)
chr5 (316-494)||(32528710-32528886)
chr5 (336-485)||(8136852-8136999)
chr5 (316-485)||(11963336-11963503)
chr5 (316-485)||(35701272-35701439)
chr5 (316-476)||(28090463-28090621)
chr5 (313-485)||(31644438-31644607)
chr5 (313-472)||(700548-700705)
chr5 (387-474)||(35955065-35955150)
chr5 (317-476)||(40489333-40489490)
chr5 (318-476)||(553394-553550)
chr5 (373-494)||(14011178-14011297)
chr5 (375-485)||(31880010-31880118)
chr5 (337-474)||(4818085-4818220)
chr5 (336-485)||(7770213-7770360)
chr5 (316-493)||(27839000-27839174)
chr5 (453-491)||(36175012-36175050)
chr5 (373-493)||(32092908-32093025)
chr5 (373-496)||(11090791-11090912)
chr5 (316-432)||(22432294-22432410)
chr5 (373-432)||(5571629-5571688)
chr5 (450-493)||(7725735-7725778)
chr5 (320-485)||(24181558-24181721)
chr5 (316-402)||(40182459-40182545)
[»] scaffold0280 (1 HSPs)
scaffold0280 (337-493)||(13613-13767)
[»] scaffold0650 (1 HSPs)
scaffold0650 (373-493)||(1569-1687)
[»] scaffold0027 (1 HSPs)
scaffold0027 (316-476)||(15167-15325)
[»] scaffold0169 (2 HSPs)
scaffold0169 (316-485)||(17988-18155)
scaffold0169 (316-424)||(12529-12637)
[»] scaffold0025 (1 HSPs)
scaffold0025 (336-493)||(5365-5521)
[»] scaffold0208 (1 HSPs)
scaffold0208 (327-476)||(2281-2428)
[»] scaffold0054 (1 HSPs)
scaffold0054 (336-485)||(23590-23737)
[»] scaffold0014 (1 HSPs)
scaffold0014 (337-424)||(101965-102052)
[»] scaffold0831 (1 HSPs)
scaffold0831 (377-419)||(3181-3223)
[»] scaffold0062 (2 HSPs)
scaffold0062 (252-353)||(3692-3791)
scaffold0062 (454-486)||(3555-3587)


Alignment Details
Target: chr3 (Bit Score: 395; Significance: 0; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 9 - 492
Target Start/End: Original strand, 32768282 - 32768764
Alignment:
Q  9 gaagaaaatacttatgccagtcttggccaataacactcttcaattattactaccccataattaagtacacaaatcattattagaatatgtctaatgttaa 108  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32768282 gaagaaaatacttatgccagtcttggccaatagcacttttcaattattactaccccataattaagtacacaaatcattattagaatatgtctaatgttaa 32768381  T
Q  109 aaacaatcgaacagttaaatcaggttaagtctcaaaagtagggttagtgatcattgagacctagatcggtttatggacattcgtaaacacatnnnnnnnn 208  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
T  32768382 aaacaatcgaacagttaaatcaggttaagcctcaaaagtagggttagtgatcattgagacctagatcggtttatggacattcgtaaacacataaaaaaa- 32768480  T
Q  209 cattaagggcgtgtttgatctgctaaacatgacataataacacaacacaaggaagaatagtgcgtgacaaactttcatggtattgaattattttttgaca 308  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||| |||    
T  32768481 cattaagggtgtgtttgatctgctaaacatgacagaataacacaacacaagggagaacagtacgtgacaaactttcatggtattgaattattttttaaca 32768580  T
Q  309 attgtatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataattt 408  Q
    || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32768581 atcgtatgatttttgggtgacaaaaggttattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataattt 32768680  T
Q  409 caatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttg 492  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  32768681 caatttttgtcatgtctcttgctttttgtttgtcatgtctccctgaaacaattttacaaatcaaacactgtacaattgaagttg 32768764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 19906815 - 19906933
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| ||||||| |||||||| |||| |||||||   ||||||  | | |||||||||||||||||||||||||    
T  19906815 aaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcctgtcccttgcctccagtttgt--tctgtccctgaaacaattttacaaatcaa 19906912  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | ||||||||||||||    
T  19906913 acactggacaactgaagttgt 19906933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 316 - 493
Target Start/End: Complemental strand, 31883111 - 31882936
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||   ||||||  |||||||||||| | |||  ||| ||  ||||||||| ||||||||  ||||| |||| ||| ||| ||||    
T  31883111 gatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgaggcacaaaaatatcagtttt 31883012  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||||||||||||||||   ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||| ||||||    
T  31883011 tgtcgtgtctcttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaacactggacaactggagttgt 31882936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 493
Target Start/End: Original strand, 3964305 - 3964459
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||||||| ||||||||  ||  |||||||        
T  3964305 tattttggtattttagacaacttgtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtccagttccttgcctccaa 3964404  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||||||||  ||| ||||||| ||||||||||||||||| | ||||||||||||||    
T  3964405 tttgtcatg--tccatgaaacagttttacaaatcaaacactggacaactgaagttgt 3964459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 24571277 - 24571444
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  24571277 gatttttgggggacaaaatcctatttttgtattttagacaacttgtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 24571376  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  24571377 tgtcctgtcccttgcctccagtttgtcttg--tacctgaaacagttttacaaatcaaacactggacaact 24571444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 493
Target Start/End: Complemental strand, 33364867 - 33364692
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||   ||||||  |||||||||||| | |||  ||  ||  ||||||||||||||||||  |||||| ||| ||| ||| ||||    
T  33364867 gatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgagacaaaaagttgtgatgtggtttgctgaggggcaaaaatatcagtttt 33364768  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||| ||||||||||||   ||||||| ||  | ||||||||| |||||||||| |||||| | ||||||||||||||    
T  33364767 tgtcctgtctcttgcctccagtttgtcctg--tacctgaaacagttttacaaataaaacactggacaactgaagttgt 33364692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 313 - 493
Target Start/End: Complemental strand, 3864766 - 3864589
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||||| |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| | ||||||||| ||| | | |    
T  3864766 tatgatttttggg-gacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaatatgagt 3864668  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    ||||||| ||||  ||||||   ||||||| |||   ||||||||| ||||||||||||||||||| |||||| |||||||    
T  3864667 ttttgtcctgtcctttgcctccagtttgtcttgta--cctgaaacagttttacaaatcaaacaccggacaactaaagttgt 3864589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 3867681 - 3867563
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| |||||||  ||||||| ||||||||| ||   || |||  ||||  ||||||||| |||||||||||||    
T  3867681 aaagttgtgctgtggtttggtgagggacaaaaatttcaggttttgtcatgtctcttgtctccagtatgttctgtc--cctgaaacagttttacaaatcaa 3867584  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||||| ||||||| ||||||    
T  3867583 acaccggacaactggagttgt 3867563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 313 - 426
Target Start/End: Complemental strand, 8648649 - 8648536
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    |||||| |||||  |||||||||||||||| ||||||||||||| | ||| |||  ||  ||||||||||||| ||||||| ||| |||| ||||||| |    
T  8648649 tatgatgtttggtggacaaaagattattttggtattttagacaatttgtacttgtgacaaaaagttgtgatgtagtttagttaggaacaagaatttcagt 8648550  T
Q  413 ttttgtcgtgtctc 426  Q
    ||||||| ||||||    
T  8648549 ttttgtcatgtctc 8648536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 373 - 472
Target Start/End: Complemental strand, 34351400 - 34351303
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| ||||||||  ||||||||||||||||   |||||||||||||| || ||| | ||||||||||  ||||||||||| |||||||||||||    
T  34351400 aaagttgtgttgtggtttgatgagggacaataatttttgtttttgtcgtgtctatttcctctagtttgtcatg--tccctgaaacagttttacaaatcaa 34351303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 493
Target Start/End: Complemental strand, 51925372 - 51925122
Alignment:
Q  239 gacataataacacaacacaaggaagaatagtgcgtgacaaactttcatggtattgaattattttttgacaattgtatgatttttgggtgacaaaagatta 338  Q
    ||||||| | |||||||||||| |||| ||  | ||||||| ||| |||| ||||||| ||||||||    || || |||||||||| ||| |||  |||    
T  51925372 gacataacagcacaacacaaggcagaacagcacatgacaaatttttatggcattgaataattttttgtt--ttatacgatttttgggggacgaaatgtta 51925275  T
Q  339 ttttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtt 438  Q
    |||| |||||  | |||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| ||| |||||||| ||||  ||||||   |||    
T  51925274 ttttggtattaaaaacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcctgtcctttgcctccagtt 51925175  T
Q  439 tgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||||||  | ||||||||| |||||||||| |||||| | ||||||| ||||||    
T  51925174 tgtcatg--tacctgaaacagttttacaaattaaacactggacaactggagttgt 51925122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 337 - 503
Target Start/End: Original strand, 21373947 - 21374111
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | |  ||||||| |||| |||||||   |    
T  21373947 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagattttgtcctgtcccttgcctcaag 21374046  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgtcatgccattt 503  Q
    |||||| |||   ||||||||| |||||||||||||||||   |||||||||||||| ||| |||||    
T  21374047 tttgtcctgta--cctgaaacagttttacaaatcaaacactagacaactgaagttgttatgtcattt 21374111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 316 - 493
Target Start/End: Complemental strand, 54622885 - 54622711
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| ||| |||   |||||| ||||||||||||| | |||  ||| |   ||||||||| |||||||| ||||| ||||| ||| | | ||||    
T  54622885 gatttttgggggacgaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtgttgtggtttcgtgagcgacaaaaatatgagtttt 54622786  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||| |||| ||||| ||| ||||||||    | ||||||||| |||||||||||||| |||| ||||||||||||||    
T  54622785 tgtcctgtcccttgcatttagtttgtcag---tacctgaaacagttttacaaatcaaataccggacaactgaagttgt 54622711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 493
Target Start/End: Complemental strand, 12349260 - 12349085
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||| ||||| ||| | | ||||    
T  12349260 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacataaagttgtgctgtggtttggtgagagacaaaaatatgagtttt 12349161  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||| |||| |||||||   ||||||| |||   ||||||||| ||||||||||||||||| | ||||||| ||||||    
T  12349160 tgtcctgtcccttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaaacactggacaactggagttgt 12349085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 38213350 - 38213517
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||| ||||| ||| | | ||||    
T  38213350 gatttttgggggacaaaatggtattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttcgtgagtgacaaaaatatgagtttt 38213449  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| ||||||||||||   | |||||   | | ||||||||||||||||||||||||||| | ||||||    
T  38213450 tgtcctgtctcttgcctccagattgtc--ctatacctgaaacaattttacaaatcaaacactggacaact 38213517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 40094499 - 40094666
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  || |||  |||||||||||||||||| ||||||||||| ||| | | ||||    
T  40094499 gatttttgagggacaaaatgctattttggtattttagacaatttgtacgtgaaacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttt 40094598  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   ||||||  | | | ||||||||| ||||||||||||||||| | ||||||    
T  40094599 tgtcctgtcccttgcctccagtttgt--tctgtacctgaaacagttttacaaatcaaacactggacaact 40094666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 485
Target Start/End: Complemental strand, 25860453 - 25860343
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    |||||||||||||||||| ||||||||||| ||| | | |||||||| |||| |||||||   ||||||| ||  | ||||||||| |||||||||||||    
T  25860453 aaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaa 25860356  T
Q  473 acaccgtacaact 485  Q
    |||| | ||||||    
T  25860355 acactggacaact 25860343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 485
Target Start/End: Original strand, 29584892 - 29585038
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||| |||||||   |    
T  29584892 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcacttgcctccag 29584991  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  29584992 tttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 29585038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 476
Target Start/End: Complemental strand, 39052927 - 39052769
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||  ||||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||| ||||| ||| | | ||||    
T  39052927 gatttttgggggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagagacaaaaatatgagtttt 39052828  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    |||| ||||  ||||||   ||||||| ||  | ||||||||| |||||||||||||||||    
T  39052827 tgtcctgtccattgcctccagtttgtcctg--tgcctgaaacagttttacaaatcaaacac 39052769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 497
Target Start/End: Original strand, 44000217 - 44000436
Alignment:
Q  274 gacaaactttcatggtattgaattattttttgacaattgtatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacgga 373  Q
    |||||||||| |||||||||||| |||||| | |  || || |||||||||  ||||||| | |||||| |||||| ||| || | |||  ||| ||  |    
T  44000217 gacaaacttttatggtattgaataatttttggtc--ttatacgatttttggtggacaaaaaactatttttgtatttcagataacttgtacgtgggacaaa 44000314  T
Q  374 aagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaa 473  Q
    || ||||||||||||||||||||||| || || |||  |||||||| ||||  |||||||  |||| |||  | ||||  ||||| |||||||||| |||    
T  44000315 aaattgtgatgtggtttagtgagggaaaaaaaattctgtttttgtcatgtcctttgccttgagtttatca--tttcccaaaaacagttttacaaatgaaa 44000412  T
Q  474 caccgtacaactgaagttgtcatg 497  Q
    ||| ||||||||  ||||||||||    
T  44000413 cacggtacaactagagttgtcatg 44000436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 50386488 - 50386370
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| ||||||||  ||||| |||| ||| |||||||||||| ||||||||||||   ||||||| ||  | ||||||||| |||||||||||||    
T  50386488 aaagttgtgctgtggtttgttgaggcacaaaaatatcaatttttgtcatgtctcttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaa 50386391  T
Q  473 acaccgtacaactgaagttgt 493  Q
    ||||   ||||||| ||||||    
T  50386390 acactagacaactggagttgt 50386370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 485
Target Start/End: Complemental strand, 51259872 - 51259702
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||  | |||||||  ||||||| ||||||||||||| | |||  ||| ||  |||||||||  ||||||| ||||||||||| ||| | | |    
T  51259872 tatgatttttaagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgccgtggtttggtgagggacaaaaatatgagt 51259773  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    ||||||| |||| |||||||   ||||||| |||   ||||||||| ||||||||||||||||| | ||||||    
T  51259772 ttttgtcctgtcccttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaaacactggacaact 51259702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 493
Target Start/End: Complemental strand, 41683075 - 41682967
Alignment:
Q  383 tgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtaca 482  Q
    ||||||||  |||||||||| | | ||| |||||||| ||||||||||||   ||||||| |||   ||||||||| ||||||||||||||||| | |||    
T  41683075 tgtggtttgctgagggacaaaagtatcagtttttgtcttgtctcttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaaacactggaca 41682978  T
Q  483 actgaagttgt 493  Q
    |||||||||||    
T  41682977 actgaagttgt 41682967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 28675786 - 28675953
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  28675786 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttt 28675885  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| | || |||||||   ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  28675886 tgtcctatcccttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 28675953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 47958521 - 47958354
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| ||| |||| ||||||||||| ||| | | ||||    
T  47958521 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtagtttggtgagggacaaaaatatgagtttt 47958422  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   |||| || ||  | ||||||||||||||||||||||||||| | ||||||    
T  47958421 tgtcctgtcccttgcctccagtttttcctg--tacctgaaacaattttacaaatcaaacactggacaact 47958354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 485
Target Start/End: Original strand, 2135123 - 2135233
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| ||| | | |||||||  |||| ||||||| | ||||||| ||  | ||||||||| |||||||||||||    
T  2135123 aaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgttctgtcccttgcctctagtttgtcctg--tacctgaaacagttttacaaatcaa 2135220  T
Q  473 acaccgtacaact 485  Q
    |||| | ||||||    
T  2135221 acactggacaact 2135233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 448 - 497
Target Start/End: Complemental strand, 30043792 - 30043743
Alignment:
Q  448 tccctgaaacaattttacaaatcaaacaccgtacaactgaagttgtcatg 497  Q
    |||| |||||||||||||||||||||||||||| |||||| |||||||||    
T  30043792 tcccagaaacaattttacaaatcaaacaccgtaaaactgacgttgtcatg 30043743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 476
Target Start/End: Complemental strand, 49749000 - 49748842
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| ||| |||  ||||||| |||||| | |||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| ||| ||||    
T  49749000 gatttttgggggacgaaatgttattttggtatttaaaacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttt 49748901  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    |||| ||||  ||||||   ||||||| ||  | ||||||||| |||||||||||||||||    
T  49748900 tgtcatgtcctttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaacac 49748842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 475
Target Start/End: Complemental strand, 20609737 - 20609580
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  20609737 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 20609638  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaaca 475  Q
    |||| |||| ||||||    ||||||| ||  | ||||||||| ||||||||||||||||    
T  20609637 tgtcctgtcccttgccaccagtttgtcctg--tacctgaaacagttttacaaatcaaaca 20609580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 20255041 - 20255207
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||  ||||||| ||||||||||||| | ||| | |||   ||| |||||| |||||||| ||||||||||| ||| | | ||||    
T  20255041 gatttttgagggacaaaatgttattttggtattttagacaacttgtagtgggacaagaa-gttgtgctgtggtttggtgagggacaaaaatatgagtttt 20255139  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||  |||||||   ||||||| |||   ||||||||| ||||||||||||||||| | ||||||    
T  20255140 tgtcctgttccttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaaacactggacaact 20255207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 42636492 - 42636325
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||  ||||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  42636492 gatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 42636393  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||  |||| |||||||   |||||||   | | ||| ||||| ||||||||||||||||| | ||||||    
T  42636392 tgttctgtcccttgcctccagtttgtc--ctatacctaaaacagttttacaaatcaaacactggacaact 42636325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 316 - 476
Target Start/End: Original strand, 34026663 - 34026821
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||| ||||| |||||||| ||||||||||| ||| | | ||||    
T  34026663 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaatatgagtttt 34026762  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    |||| |||| |||||||   |||||||   | | ||||||||| |||||||||||||||||    
T  34026763 tgtcatgtcccttgcctccagtttgtc--ctatacctgaaacagttttacaaatcaaacac 34026821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 486
Target Start/End: Original strand, 29646062 - 29646230
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||   |||||| |||||||| |||| | |||  ||| ||  |||||||||||||||||| ||||||||||| ||| |   ||||    
T  29646062 gatttttgggggacaaaatgctattttggtattttaaacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatatgtttt 29646161  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactg 486  Q
    |||| | || |||||||   |||| ||  || | ||| ||||| ||||||||||||||||| | |||||||    
T  29646162 tgtcctatcccttgcctccagtttatc--gtgtacctaaaacagttttacaaatcaaacactgaacaactg 29646230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 1344796 - 1344629
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||  ||  ||||||||| |||||||| ||||||||||| ||| | | |||     
T  1344796 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttc 1344697  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   ||||||| ||  | ||||||| | ||||||||||||||||| | ||||||    
T  1344696 tgtcctgtcccttgcctccagtttgtcctg--tacctgaaatagttttacaaatcaaacactggacaact 1344629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 44116935 - 44117102
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  |||||||||  |||||||  |||||||||| ||| | | ||||    
T  44116935 gatttttgagggacaaaatgctatttttgtattttagacaacttgtacgtgggacaaaaagttgtgcagtggtttgatgagggacaaaaatatgagtttt 44117034  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   ||||||| |||   ||||||||  ||||||||||||||||| | ||||||    
T  44117035 tgtcctgtcccttgcctccagtttgtcctgta--cctgaaacggttttacaaatcaaacactggacaact 44117102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 424
Target Start/End: Complemental strand, 14155538 - 14155442
Alignment:
Q  327 gacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtc 424  Q
    ||||||||||||||||  |||||||||||| | ||| |||  ||  ||||||||| | || |||||||||||| || ||||||| |||||||| ||||    
T  14155538 gacaaaagattattttgatattttagacaacttgtacttgagacaaaaagttgtgttatgatttagtgagggataa-aatttcagtttttgtcatgtc 14155442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 476
Target Start/End: Original strand, 51296577 - 51296735
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    ||||||| || |||||||   |||||| ||||||||||||| | ||| || | ||  ||| ||||| |||||||| ||||||||||| ||| | | ||||    
T  51296577 gattttttggggacaaaatgctatttttgtattttagacaacttgtacttaggacaaaaaattgtgttgtggtttggtgagggacaaaaatatgagtttt 51296676  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    |||| ||||  ||||||   ||||||| ||  | ||||||||| |||||||||| ||||||    
T  51296677 tgtcctgtcctttgcctccagtttgtcctg--tacctgaaacagttttacaaattaaacac 51296735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 2e-32; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 327 - 493
Target Start/End: Original strand, 10932742 - 10932905
Alignment:
Q  327 gacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctc 426  Q
    ||||||||| |||||| ||||||||||||||| |||  ||||||  |||||||||||||||||||||||||||||| ||||| | ||||| || ||||||    
T  10932742 gacaaaagactattttggtattttagacaaattgtacgtggaactaaaagttgtgatgtggtttagtgagggacaa-aattttagtttttatcatgtctc 10932840  T
Q  427 ttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||||| |  |||||| ||  ||||  ||||||||||| |||||||||||| |||||||||||||||    
T  10932841 ttgcctctactttgtcttg--tcccataaacaattttataaatcaaacaccatacaactgaagttgt 10932905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 316 - 493
Target Start/End: Complemental strand, 30543132 - 30542957
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||  ||||||| ||||||||||||| | |||  ||| ||| ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  30543132 gatttttgggggacaaaatgttattttggtattttagacaacttgtacgtgggacgaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttt 30543033  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||| ||||  ||||||   ||||||||||  | ||||||||| ||||||||||||||||| | |||||| |||||||    
T  30543032 tgtcctgtccattgcctccagtttgtcatg--tacctgaaacagttttacaaatcaaacactggacaactaaagttgt 30542957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 313 - 493
Target Start/End: Original strand, 15001459 - 15001636
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||||| |||||| | | ||||| |||||||||| || | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||||||| |    
T  15001459 tatgatttttgggggacaaatgct-attttggtattttagataacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagt 15001557  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    ||||||  ||||| ||||||   ||||||| ||||  ||||||||| ||||||||||||||||| | ||||||||||||||    
T  15001558 ttttgttctgtctattgcctccagtttgtcctgtc--cctgaaacagttttacaaatcaaacactggacaactgaagttgt 15001636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 316 - 493
Target Start/End: Original strand, 41548613 - 41548788
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||  |||||||  |||||||||||| | |||  ||| ||  ||||||||| |||||| |  ||||| |||| ||| ||| ||||    
T  41548613 gatttttgggggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtctgctgaggtacaaaaatatcagtttt 41548712  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||| ||||||||||||   ||||||||||| ||  ||||||| ||||||||||||||||| | ||||||||||||||    
T  41548713 tgtcctgtctcttgcctccagtttgtcatgtatc--tgaaacagttttacaaatcaaacactggacaactgaagttgt 41548788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 313 - 493
Target Start/End: Original strand, 35225654 - 35225832
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||||||||| |||   |||||| ||||||||||||| | ||| |||  ||  |||||||||||||||||| | ||||||||| |||| || |    
T  35225654 tatgatttttgggtgacgaaatgctatttttgtattttagacaacttgtacttgtgacaaaaagttgtgatgtggtttggcgagggacaaaaattgcagt 35225753  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    ||||||| |||| |||||||   ||||||| ||  ||||||||||  ||||||||| ||||||| | ||||||| ||||||    
T  35225754 ttttgtcctgtcccttgcctccagtttgtcctg--tccctgaaactgttttacaaaccaaacactggacaactggagttgt 35225832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 313 - 485
Target Start/End: Complemental strand, 37664396 - 37664226
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  |||||||||||||||||| ||||||||||| ||| | | |    
T  37664396 tatgatttttgagcgacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagt 37664297  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    ||||||| |||| ||||||| | ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  37664296 ttttgtcctgtcccttgcctctagtttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 37664226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 485
Target Start/End: Complemental strand, 8673168 - 8672998
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |    
T  8673168 tatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagt 8673069  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    ||||||| |||| |||||||   ||||||||||  | ||||||||| ||||||||||||||||| | ||||||    
T  8673068 ttttgtcctgtcccttgcctccagtttgtcatg--tacctgaaacagttttacaaatcaaacactggacaact 8672998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 7591500 - 7591382
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| ||||||||  ||||| |||| ||| ||| |||||||| ||||||||||||   ||||||| |||   ||||||||| |||||||||||||    
T  7591500 aaagttgtgttgtggtttgctgaggcacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaa 7591403  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | ||||||||||||||    
T  7591402 acactggacaactgaagttgt 7591382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 316 - 476
Target Start/End: Complemental strand, 29563336 - 29563178
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | ||||||| | |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  29563336 gatttttgagggacaaaatactattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttt 29563237  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    |||| |||| |||||||   ||||||| ||  | ||||||||| |||||||||||||||||    
T  29563236 tgtcctgtcccttgcctcgagtttgtcctg--tacctgaaacagttttacaaatcaaacac 29563178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 29611108 - 29610990
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| | ||||||||| ||||||| |||||||| |||| |||||||   ||||||  ||||  ||||||||| |||||||||||||    
T  29611108 aaagttgtgttgtggtttggcgagggacaaaaatttcagtttttgtcctgtcccttgcctccagtttgttctgtc--cctgaaacagttttacaaatcaa 29611011  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||  | ||||||||||||||    
T  29611010 acattggacaactgaagttgt 29610990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 337 - 493
Target Start/End: Original strand, 39642899 - 39643053
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| |||||||||||||   |||  ||| || |||||||||| |||||||| ||||||||||| ||| ||| ||||| || |||| |||||||   |    
T  39642899 tattttggtattttagacaacctgtacgtgggacagaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttatcttgtcccttgcctccag 39642998  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||||| ||  | ||||||||| ||||| ||||||||||| | ||||||||||||||    
T  39642999 tttgtcctg--tacctgaaacagttttaaaaatcaaacactggacaactgaagttgt 39643053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 493
Target Start/End: Complemental strand, 16485958 - 16485744
Alignment:
Q  275 acaaactttcatggtattgaattattttttgacaattgtatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaa 374  Q
    ||||| ||| |||||||||||| ||||| ||   ||| ||||||||||||||||| |||   |||||| |||||||||| || |  ||  | | ||  ||    
T  16485958 acaaatttttatggtattgaataattttctgt--attatatgatttttgggtgacgaaatgctatttttgtattttagaaaacttatacgtaggacaaaa 16485861  T
Q  375 agttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaac 474  Q
    ||||||| |||||||| | ||||||||| |||| || |||||||  ||||  |||||||   |||||||||||  |||||||| ||||||||||||||||    
T  16485860 agttgtgctgtggtttggcgagggacaaaaattgcagtttttgttctgtcctttgccttcaatttgtcatgtc--cctgaaactattttacaaatcaaac 16485763  T
Q  475 accgtacaactgaagttgt 493  Q
    || | ||||||||| ||||    
T  16485762 actggacaactgaaattgt 16485744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 373 - 476
Target Start/End: Complemental strand, 31513636 - 31513535
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||| |||||||   ||||||||  ||| |||||||||||||||||||||||    
T  31513636 aaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtca--tctacctgaaacaattttacaaatcaa 31513539  T
Q  473 acac 476  Q
    ||||    
T  31513538 acac 31513535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 5968974 - 5968807
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||  ||||||| ||||||||||||| | |||  ||| |   ||||||||| |||||||| |||| |||||| ||| | | ||||    
T  5968974 gatttttgagggacaaaatgttattttggtattttagacaatttgtacgtgggataaaaagttgtgctgtggtttggtgaaggacaaaaatatgagtttt 5968875  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| ||||||| | ||||||||||  | ||| ||||| ||||||||||||||||| | ||||||    
T  5968874 tgtcctgtcccttgcctctagtttgtcatg--taccttaaacagttttacaaatcaaacactggacaact 5968807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 12753435 - 12753268
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||  ||||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| |||||| |||| ||| | | ||||    
T  12753435 gatttttgggggacaaaatgttattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgaggaacaaaaatatgagtttt 12753336  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| ||||  |||||||  ||||||| ||  | ||||||||| | ||||||||||||||| | ||||||    
T  12753335 tgtcttgtcatttgccttcagtttgtcctg--tacctgaaacagtcttacaaatcaaacactggacaact 12753268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 37618445 - 37618327
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| ||| ||| |||||||| ||||  ||||||    |||||| |||   ||||||||| |||||||||||||    
T  37618445 aaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcctgtcctttgcctccaatttgtcctgta--cctgaaacagttttacaaatcaa 37618348  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||||| ||||||| ||||||    
T  37618347 acaccggacaactggagttgt 37618327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 330 - 497
Target Start/End: Original strand, 11944884 - 11945049
Alignment:
Q  330 aaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttg 429  Q
    |||||| |||||| ||||||||||||||| |||  ||  ||  ||||||||  |||||||||||| || || | | ||| | |||||    |||||||||    
T  11944884 aaaagactattttggtattttagacaaattgtacatgagacaaaaagttgtagtgtggtttagtggggaactagagtttgagtttttactatgtctcttg 11944983  T
Q  430 ccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgtcatg 497  Q
    ||| | |||||||||  |||| | ||||||||||||| ||||||||| |||||| |||||||||||||    
T  11944984 cctctagtttgtcat--ctccataaaacaattttacatatcaaacactgtacaattgaagttgtcatg 11945049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 4052475 - 4052642
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  4052475 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 4052574  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||    |||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  4052575 tgtcctgtcccttgcctccaatttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 4052642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 10467059 - 10467226
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||   ||||||  |||||||||||| | |||  ||| ||  ||||||||| ||||||||  ||||| |||| ||| ||| ||||    
T  10467059 gatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgctgaggaacaaaaatatcagtttt 10467158  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| ||||||||||||   ||||||| ||  | ||| ||||| ||||||||||||||||| | ||||||    
T  10467159 tgtcttgtctcttgcctccagtttgtcctg--tacctaaaacagttttacaaatcaaacactggacaact 10467226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 29672433 - 29672266
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| |||||||||| || | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  29672433 gatttttgagggacaaaatgctattttggtattttagataacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttt 29672334  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| ||||||| | ||||||| ||  | ||||||||| |||||| |||||||||| | ||||||    
T  29672333 tgtcctgtcccttgcctctagtttgtcctg--tacctgaaacagttttacgaatcaaacactggacaact 29672266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 336 - 493
Target Start/End: Original strand, 30501160 - 30501315
Alignment:
Q  336 ttattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgcctttt 435  Q
    ||||||| ||||||||| ||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| |   |||||||| |||| |||||||       
T  30501160 ttatttttgtattttaggcaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgtgtttttgtcctgtcccttgcctcca 30501259  T
Q  436 gtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    ||||||| |||   ||||||||| ||||||||||||||||| |  |||||||||||||    
T  30501260 gtttgtcttgta--cctgaaacagttttacaaatcaaacactgggcaactgaagttgt 30501315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 449
Target Start/End: Complemental strand, 10656739 - 10656663
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctc 449  Q
    ||||||||| |||||||| |||| |||||| || |||| |||||||| ||||| |||||| | ||||||||||||||    
T  10656739 aaagttgtgttgtggttttgtgaaggacaaaaaattcagtttttgtcctgtcttttgcctctagtttgtcatgtctc 10656663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 485
Target Start/End: Complemental strand, 7394913 - 7394757
Alignment:
Q  327 gacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctc 426  Q
    |||||||  ||||||| ||||||||||||| | |||  ||  ||  ||||||||| | |||||| ||||||||||| ||| | | |||||||| |||| |    
T  7394913 gacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgttatggtttggtgagggacaaaaatatgagtttttgtcatgtccc 7394814  T
Q  427 ttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||||| | ||||||||||  | ||||||||| ||||  ||||||||||| | ||||||    
T  7394813 ttgcctctagtttgtcatg--tacctgaaacagttttgtaaatcaaacactggacaact 7394757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 313 - 475
Target Start/End: Original strand, 27103951 - 27104111
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||| | |||||||   ||||||  |||||||||||| | |||  ||| ||  |||||||||  ||||||| ||||||||||| ||| | | |    
T  27103951 tatgatttttgagggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgcagtggtttggtgagggacaaaaatatgagt 27104050  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaaca 475  Q
    ||||||| |||| |||||||   ||||||| ||  | ||||||||| ||||||||||||||||    
T  27104051 ttttgtcatgtcccttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaaca 27104111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 493
Target Start/End: Original strand, 37474762 - 37474870
Alignment:
Q  383 tgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtaca 482  Q
    ||||||||  |||||||||| ||| | | |||||||| ||||||||||||   ||||||| |||   ||||||||| ||||||||||||||||| | |||    
T  37474762 tgtggtttgctgagggacaaaaatataagtttttgtcctgtctcttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaaacactggaca 37474859  T
Q  483 actgaagttgt 493  Q
    |||| ||||||    
T  37474860 actggagttgt 37474870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 3251766 - 3251599
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||  ||||||| ||||||||||||| | |||  | | |   |||||||||||||||||| ||||||||||| ||| | | ||||    
T  3251766 gatttttgagggacaaaatgttattttggtattttagacaacttgtacgtaggataaaaagttgtgatgtggtttggtgagggacaaaaatataagtttt 3251667  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||  |||| |||||||   ||||||| ||  | ||||||||| ||||| ||||||||||| | ||||||    
T  3251666 tgttctgtcgcttgcctccagtttgtcctg--tacctgaaacagttttataaatcaaacactggacaact 3251599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 32020111 - 32019944
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | ||||||| | |||||| ||||||||||||| | |||  ||||||  ||||||||| |||||||| |||||||| || ||| | | ||||    
T  32020111 gatttttgagggacaaaatactattttggtattttagacaacttgtacgtggaacaaaaagttgtgctgtggtttggtgagggataaaaatatgagtttt 32020012  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |  | ||||| |   ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  32020011 tgtcctaccccttgcttccagtttgtcctg--tacctgaaacagttttacaaatcaaacactgaacaact 32019944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 34063123 - 34063290
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| | ||||||||| ||| | | ||||    
T  34063123 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggcgagggacaaaaatatgagtttt 34063222  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   ||||||| |||   ||||||| | ||||||||||||||||| | ||||||    
T  34063223 tgtcctgtcccttgcctccagtttgtcctgta--cctgaaagagttttacaaatcaaacactggacaact 34063290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 34101503 - 34101670
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  |||||   |||||| || |||||||| ||||||||||| ||| | | ||||    
T  34101503 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtggaaaaaaaagttatgttgtggtttggtgagggacaaaaatatgagtttt 34101602  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||  |||| |||||||   ||||||| |||   ||||||||| ||||||||||||||||| | ||||||    
T  34101603 tgtgttgtcccttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaaacactggacaact 34101670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 45446450 - 45446617
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| |||||| |||| ||| | | ||||    
T  45446450 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaggaacaaaaatatgagtttt 45446549  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    | || |||| |||||||   ||||||| |||   ||||||||| ||||||||||||||||| | ||||||    
T  45446550 tatcctgtcccttgcctccagtttgtcgtgta--cctgaaacagttttacaaatcaaacactggacaact 45446617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 493
Target Start/End: Original strand, 22999330 - 22999428
Alignment:
Q  393 tgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttg 492  Q
    |||||||||| ||| ||| |||||||| ||||||||||||   ||||||| ||  | ||||||||| ||||||||||||||||| | ||||| | |||||    
T  22999330 tgagggacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaacactggacaaccggagttg 22999427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 40389092 - 40389210
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||| || || ||| ||| |||||||| ||||  ||||||   ||||||| |||   ||||||||| |||||||||||||    
T  40389092 aaagttgtgctgtggtttggtgagagataaaaatatcagtttttgtcctgtcctttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaa 40389189  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | ||||||| ||||||    
T  40389190 acactggacaactggagttgt 40389210  T

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Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 485
Target Start/End: Original strand, 41709829 - 41709939
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| ||| | | |||||||| ||||  ||||||   ||||||| ||  | ||||||||| |||||||||||||    
T  41709829 aaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcatttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaa 41709926  T
Q  473 acaccgtacaact 485  Q
    |||| | ||||||    
T  41709927 acactggacaact 41709939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 497
Target Start/End: Original strand, 45114107 - 45114229
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||  |||||||| ||||||||||| ||| | | |||||||| | || ||||| | | ||||||  |||   ||||||||| |||||||||||||    
T  45114107 aaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcctctcccttgcatctcgtttgttctgta--cctgaaacagttttacaaatcaa 45114204  T
Q  473 acaccgtacaactgaagttgtcatg 497  Q
    |||| | |||| |||||||||||||    
T  45114205 acactgaacaattgaagttgtcatg 45114229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 497
Target Start/End: Complemental strand, 11926812 - 11926761
Alignment:
Q  446 tctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgtcatg 497  Q
    ||||| ||||||||||||||  ||||||||| |||||| |||||||||||||    
T  11926812 tctccatgaaacaattttacttatcaaacactgtacaattgaagttgtcatg 11926761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 473
Target Start/End: Complemental strand, 14005143 - 14004999
Alignment:
Q  327 gacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctc 426  Q
    |||||||  ||||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| |||| |||||| ||| | | |||||||| |||| |    
T  14005143 gacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgatggacaaaaatatgagtttttgtcttgtccc 14005044  T
Q  427 ttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaa 473  Q
    ||||||   ||||||| ||  | ||| ||||| ||||||||||||||    
T  14005043 ttgcctccagtttgtcctg--tacctcaaacagttttacaaatcaaa 14004999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 424
Target Start/End: Original strand, 21272700 - 21272787
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtc 424  Q
    |||||||||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |||||||| ||||    
T  21272700 tattttagtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtc 21272787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 497
Target Start/End: Original strand, 9624271 - 9624390
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| ||||||||||  |||| | | |||||  || |||||| ||||||||| ||   ||||||| ||||  || ||||||||||||||||| ||    
T  9624271 aaagttgtgttgtggtttagcaagggtcgaaaattt--atgtttgtcatgtctcttgtctcccgtttgtcttgtc--ccagaaacaattttacaaat-aa 9624365  T
Q  473 acaccgtacaactgaagttgtcatg 497  Q
    |||  ||||||||||||||||||||    
T  9624366 acagtgtacaactgaagttgtcatg 9624390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 419
Target Start/End: Complemental strand, 32303698 - 32303592
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |    
T  32303698 tatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagt 32303599  T
Q  413 ttttgtc 419  Q
    |||||||    
T  32303598 ttttgtc 32303592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 433
Target Start/End: Complemental strand, 3801032 - 3800936
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgcctt 433  Q
    |||||| |||||||||| || |||||  || |||  ||||||||||||||||||| ||||| |||| || ||   |||||||| |||| ||||||||    
T  3801032 tatttttgtattttagataactagtatgtgaaacaaaaagttgtgatgtggtttaatgaggaacaaaaacttatgtttttgtcttgtcccttgcctt 3800936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 449
Target Start/End: Original strand, 5892120 - 5892196
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctc 449  Q
    ||||||||| |  |||||| ||| |||||||||||||| |||||||| |||||| | | | | ||||||||||||||    
T  5892120 aaagttgtgttacggtttaatgaaggacaataatttcagtttttgtcttgtctcgttcgtctagtttgtcatgtctc 5892196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 4e-24; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 249 - 492
Target Start/End: Original strand, 329404 - 329643
Alignment:
Q  249 cacaacacaaggaagaatagtgcgtgacaaactttcatggtattgaattattttttgacaattgtatgatttttgggtgacaaaagattattttagtatt 348  Q
    |||||||||||| | || ||| | ||||||| ||| |||||||||||| |||| |||    || ||||||||||||| |||||||   |||||| || ||    
T  329404 cacaacacaaggcataacagtacatgacaaatttttatggtattgaataatttcttgtt--ttatatgatttttgggggacaaaatgctattttggtgtt 329501  T
Q  349 ttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtct 448  Q
    |||| ||| | |||  ||| ||  |||||||||||||||||| ||||||||||| ||||||| |||||||| ||||  ||||||   ||||||  | | |    
T  329502 ttaggcaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatttcagtttttgtcttgtcctttgcctccagtttgt--tctgt 329599  T
Q  449 ccctgaaacaattttacaaatcaaacaccgtacaactgaagttg 492  Q
    |||||||||| ||||||||||||||||| | ||||||| |||||    
T  329600 ccctgaaacagttttacaaatcaaacacgggacaactggagttg 329643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 21784870 - 21785037
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||  |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  21784870 gatttttggaggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttt 21784969  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| ||||||||||||   ||||||||||  | ||||||||| ||||||||||||||||| | ||||||    
T  21784970 tgtcctgtctcttgcctccagtttgtcatg--tgcctgaaacagttttacaaatcaaacactgaacaact 21785037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 44748694 - 44748861
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||  |||||||| ||||||||||| ||||| | ||||    
T  44748694 gatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtattgtggtttggtgagggacaaaaatttgagtttt 44748793  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||  |||| ||||||| | ||||||||||  | ||||||||| ||||||||||||||||| | ||||||    
T  44748794 tgttctgtcccttgcctctagtttgtcatg--tacctgaaacagttttacaaatcaaacactggacaact 44748861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 493
Target Start/End: Original strand, 9913524 - 9913698
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| ||| |||  ||||||| |||||||||||||   |||  ||| |   |||||||||||||||||| ||||| ||||| ||| ||||||||    
T  9913524 gatttttgggggacgaaatgttattttggtattttagacaacctgtacgtgggaaaaaaagttgtgatgtggtttggtgagcgacaa-aatatcaatttt 9913622  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||| |||| ||||||| | |||| || |||   ||||||| | ||||||||||||||||||| ||||||| ||||||    
T  9913623 tgtcctgtcccttgcctctagtttatcctgta--cctgaaatagttttacaaatcaaacaccggacaactggagttgt 9913698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 493
Target Start/End: Original strand, 9927212 - 9927386
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| ||| |||  ||||||| |||||||||||||   |||  ||| |   |||||||||||||||||| ||||| ||||| ||| ||||||||    
T  9927212 gatttttgggggacgaaatgttattttggtattttagacaacctgtacgtgggaaaaaaagttgtgatgtggtttggtgagcgacaa-aatatcaatttt 9927310  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||| |||| ||||||| | |||| || |||   ||||||| | ||||||||||||||||||| ||||||| ||||||    
T  9927311 tgtcctgtcccttgcctctagtttatcctgta--cctgaaatagttttacaaatcaaacaccggacaactggagttgt 9927386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 36769665 - 36769498
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  36769665 gatttttgagagacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 36769566  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| ||||||| | ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  36769565 tgtcctgtcccttgcctctagtttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 36769498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 1363692 - 1363810
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||||||||||||  |||||||||| ||| |||  ||||||| |||| |||||||   ||||||| |||   | |||||||||||||||||||||    
T  1363692 aaagttgtgatgtggtttgatgagggacaaaaatatcagcttttgtcatgtcccttgcctccagtttgtcctgta--catgaaacaattttacaaatcaa 1363789  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | ||||||||||||||    
T  1363790 acactggacaactgaagttgt 1363810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 476
Target Start/End: Complemental strand, 41211275 - 41211138
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||| ||||||| | |    
T  41211275 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctag 41211176  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    |||||| ||  | ||||||||| |||||||||||||||||    
T  41211175 tttgtcttg--tacctgaaacagttttacaaatcaaacac 41211138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 274 - 424
Target Start/End: Complemental strand, 29372915 - 29372767
Alignment:
Q  274 gacaaactttcatggtattgaattattttttgacaattgtatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacgga 373  Q
    |||||||||| |||||||| ||| |||||| | |  || ||||||||||||  || ||||| ||| |||   ||||||||||| | |||  |||||| ||    
T  29372915 gacaaacttttatggtattaaataatttttggtc--ttatatgatttttggtggataaaaggttaatttgaaattttagacaacttgtacatggaacaga 29372818  T
Q  374 aagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtc 424  Q
    |||||||| ||||||||||||| |||||| ||||| | |||||||||||||    
T  29372817 aagttgtgttgtggtttagtgacggacaaaaattttagtttttgtcgtgtc 29372767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 493
Target Start/End: Original strand, 38301342 - 38301516
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||  |||||||  |||||||||||| | ||  | ||| |  ||||||||| ||||||||  |||||||||| ||| ||| ||||    
T  38301342 gatttttgggggacaaaatgttattttgatattttagacaacttgtcgtggga-caaaaagttgtgttgtggtttgctgagggacaaaaatatcagtttt 38301440  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||| ||||||||||||   ||||||| ||  | ||||||||| ||||||||||||||||| | |||| || ||||||    
T  38301441 tgtcctgtctcttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaacactggacaattggagttgt 38301516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 47953189 - 47953356
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  47953189 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 47953288  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  47953289 tgtcatgtcccttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 47953356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 485
Target Start/End: Complemental strand, 26994300 - 26994154
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | |  ||||||| |||| |||||||   |    
T  26994300 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagattttgtcctgtcccttgcctccag 26994201  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||||||||  | ||||||||| ||||||||||||||||| | ||||||    
T  26994200 tttgtcatg--tacctgaaacagttttacaaatcaaacactggacaact 26994154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 493
Target Start/End: Original strand, 34519528 - 34519682
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| | ||||||||| |||| || |||||||| |||| |||||||   |    
T  34519528 tatttttgtattttagacaacttgtacctgggacaaaaagttgtgttgtggtttggcgagggacaaaaattgcagtttttgtcctgtcccttgcctccag 34519627  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
     ||||||||||  ||||||||  |||||||| || ||||| | ||||||||||||||    
T  34519628 cttgtcatgtc--cctgaaactgttttacaattcgaacactggacaactgaagttgt 34519682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 485
Target Start/End: Complemental strand, 47316737 - 47316627
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||| |||||||   ||||||| |||   |||||||||||||||||||||||    
T  47316737 aaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgta--cctgaaacaattttacaaatcaa 47316640  T
Q  473 acaccgtacaact 485  Q
    |||| | ||||||    
T  47316639 acactggacaact 47316627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 316 - 475
Target Start/End: Original strand, 21133371 - 21133528
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| ||| |||   |||||| ||||||||||||| | |||  ||  ||  ||||||||||||||||||| ||||||| |||||| ||| ||||    
T  21133371 gatttttgggagacgaaatgctattttggtattttagacaatttgtatgtgagacaaaaagttgtgatgtggtttattgagggaaaataatatcagtttt 21133470  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaaca 475  Q
    |||| |||| ||||||||  ||||||| ||  | | ||||||| |||||||||| |||||    
T  21133471 tgtcttgtcccttgccttcagtttgtcctg--tacttgaaacagttttacaaattaaaca 21133528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 10932653 - 10932486
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| ||| |||| ||||||||||| ||| | | ||||    
T  10932653 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtagtttggtgagggacaaaaatatgagtttt 10932554  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   ||||||| |||   ||||||||| ||||||||||||||||| | ||||||    
T  10932553 tgtcctgtcccttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaaacactgaacaact 10932486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 18386524 - 18386690
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  18386524 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 18386623  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
     ||| |||| |||||||   |||||||||||   ||||||||| ||||||||||||||||| | ||||||    
T  18386624 -gtcctgtcccttgcctccagtttgtcatgta--cctgaaacagttttacaaatcaaacactggacaact 18386690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 337 - 419
Target Start/End: Original strand, 48699418 - 48699500
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtc 419  Q
    |||||| ||||||||||||| | |||  ||||||  | ||||||| |||||||||||||||||||| ||||||| ||||||||    
T  48699418 tattttggtattttagacaacttgtacgtggaacaaatagttgtgttgtggtttagtgagggacaagaatttcagtttttgtc 48699500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 485
Target Start/End: Original strand, 11250673 - 11250783
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||| |||||||   ||||||| ||  | |||||||||||||||||||| ||    
T  11250673 aaagttgtgttgtggtttggtgagggacaaaaatatgattttttgtcctgtcccttgcctccagtttgtcctg--tacctgaaacaattttacaaatgaa 11250770  T
Q  473 acaccgtacaact 485  Q
    |||| | ||||||    
T  11250771 acactggacaact 11250783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 486
Target Start/End: Complemental strand, 23349365 - 23349219
Alignment:
Q  338 attttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgt 437  Q
    ||||||||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| ||| |||||||  |||| |||||||   ||    
T  23349365 attttagtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgttctgtcccttgcctccagt 23349266  T
Q  438 ttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactg 486  Q
    ||||||||  | | ||||| | |||||||| |||||||| | |||||||    
T  23349265 ttgtcatg--tacttgaaatagttttacaattcaaacactggacaactg 23349219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 48894773 - 48894891
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    |||||||||||||||||||||||  ||||| ||| | | |||||||| |||| ||||| |   ||||||  |||   |||||||||||||||||||||||    
T  48894773 aaagttgtgatgtggtttagtgaatgacaaaaatatgagtttttgtcctgtcccttgcatccagtttgtactgta--cctgaaacaattttacaaatcaa 48894870  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | ||||||| ||||||    
T  48894871 acactggacaactggagttgt 48894891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 475
Target Start/End: Original strand, 40753154 - 40753311
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||| ||| ||||||||||| ||| | | ||||    
T  40753154 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagtttt 40753253  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaaca 475  Q
    |||| |||| |||||||   ||||||| ||  | ||||||||| ||||||||||||||||    
T  40753254 tgtcctgtcccttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaaca 40753311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 485
Target Start/End: Original strand, 1870145 - 1870301
Alignment:
Q  327 gacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctc 426  Q
    |||||||  |||||||  |||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||| |    
T  1870145 gacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtccc 1870244  T
Q  427 ttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    ||||||   |||| || ||  | ||||||||| ||||||||||||||||| | ||||||    
T  1870245 ttgcctccagtttatcttg--tacctgaaacagttttacaaatcaaacactgaacaact 1870301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 316 - 431
Target Start/End: Complemental strand, 30849342 - 30849227
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||  ||||||| |||||||| |||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  30849342 gatttttgggggacaaaatgttattttggtattttatacaacttgtatatgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttt 30849243  T
Q  416 tgtcgtgtctcttgcc 431  Q
    |||| |||| ||||||    
T  30849242 tgtcctgtcccttgcc 30849227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 493
Target Start/End: Original strand, 20127288 - 20127463
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| ||| |||  | ||||| |||||||| |||||| |||  ||| ||  ||||||||||||||||||  ||||| |||| ||| |||  |||    
T  20127288 gatttttgggggacgaaatgtcattttggtattttacacaaattgtacgtgggacaaaaagttgtgatgtggtttgctgaggaacaaaaatatcagcttt 20127387  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||| |||| |||||||   ||||||| ||  | ||||||| | ||||| ||||||||||| | ||||||| ||||||    
T  20127388 tgtcctgtcccttgcctccagtttgtcctg--tacctgaaatagttttaaaaatcaaacactggacaactggagttgt 20127463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 474
Target Start/End: Complemental strand, 22724630 - 22724471
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||||| ||| |||   |||||| ||||||||||||| | |||  ||| ||  ||||||| | |||||||| ||||||||||| |||| ||      
T  22724630 tatgatttttgggcgacgaaatgctatttttgtattttagacaacttgtacgtgggacataaagttgcgctgtggtttggtgagggacaaaaattgcagc 22724531  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaac 474  Q
    ||||||| | || |||||||   ||||||| ||  ||||||||||  |||||||||||||||    
T  22724530 ttttgtcatatcccttgcctccagtttgtcctg--tccctgaaactgttttacaaatcaaac 22724471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 26371905 - 26371738
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||||||||||||||||| | |||  ||| ||  ||||||||| |||| ||| ||||||||||| ||| | | ||||    
T  26371905 gatttttgagggacaaaatgctattttagtattttagacaacttgtacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagtttt 26371806  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   ||||||| ||  | ||||||| | |||| |||||||||||| | ||||||    
T  26371805 tgtcctgtcccttgcctccagtttgtcctg--tacctgaaatagttttgcaaatcaaacactggacaact 26371738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 418
Target Start/End: Original strand, 9173094 - 9173139
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgt 418  Q
    |||||||||  ||||||||||||| |||||||||||||||||||||    
T  9173094 aaagttgtgtcgtggtttagtgagcgacaataatttcaatttttgt 9173139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 313 - 476
Target Start/End: Original strand, 18470680 - 18470839
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||| | |||||||  ||||||| ||||||||||||| | |||  ||| ||  |||||| || |||||||| ||||| ||||| ||| | | |    
T  18470680 tatgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttatgctgtggtttggtgagagacaaaaatatgagt 18470779  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    ||||||| ||  ||||||||   ||||||| ||  | ||||||||| |||||||||||||||||    
T  18470780 ttttgtcctg--tcttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaacac 18470839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 485
Target Start/End: Original strand, 29661379 - 29661489
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||| |||||||   ||||||||||  | |||||| || || ||||||||||    
T  29661379 aaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatg--tacctgaatcagttctacaaatcaa 29661476  T
Q  473 acaccgtacaact 485  Q
    |||| | ||||||    
T  29661477 acactggacaact 29661489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 485
Target Start/End: Complemental strand, 43158725 - 43158615
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| || |||||||| ||| | | |||||||| |||| |||||||   ||||||| |||   ||||||||| |||||||||||||    
T  43158725 aaagttgtgttgtggtttggtaagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaa 43158628  T
Q  473 acaccgtacaact 485  Q
    |||| | ||||||    
T  43158627 acactggacaact 43158615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 475
Target Start/End: Complemental strand, 11321981 - 11321824
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  11321981 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 11321882  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaaca 475  Q
    |||| ||||  ||||||   ||||||| ||  | |||||| || ||||||||||||||||    
T  11321881 tgtcctgtccgttgcctccagtttgtcctg--tacctgaatcagttttacaaatcaaaca 11321824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 424
Target Start/End: Complemental strand, 15035390 - 15035241
Alignment:
Q  273 tgacaaactttcatggtattgaattattttttgacaattgtatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacgg 372  Q
    ||||||| ||| |||||||||||| ||||||||    ||||| |||||||||  | |||||  |||||||  |||||||||||| | |||  ||| ||      
T  15035390 tgacaaatttttatggtattgaataattttttgtt--ttgtacgatttttggtgggcaaaatgttattttgatattttagacaatttgtatgtggtacaa 15035293  T
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtc 424  Q
    ||||||||| |||||| | |||||| |||| |||||||||||| ||| ||||    
T  15035292 aaagttgtgttgtggtctggtgaggaacaagaatttcaattttcgtcctgtc 15035241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 493
Target Start/End: Complemental strand, 34295503 - 34295332
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||||| |||||||   ||||||  |||||||||||| | |||  ||| ||  ||||||||| ||||||||  |||||||||| ||| ||| |    
T  34295503 tatgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaatatcagt 34295404  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||||       ||||||||   ||||||||||  | ||||||||| ||||||||||||||||| | | ||||| ||||||    
T  34295403 ttttg-------tcttgcctccagtttgtcatg--tacctgaaacagttttacaaatcaaacactggataactggagttgt 34295332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 493
Target Start/End: Complemental strand, 46448608 - 46448565
Alignment:
Q  450 cctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||||||||||||||||||||||||||   ||||||||||||||    
T  46448608 cctgaaacaattttacaaatcaaacactagacaactgaagttgt 46448565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 424
Target Start/End: Original strand, 8413263 - 8413308
Alignment:
Q  378 tgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtc 424  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||    
T  8413263 tgtgatgtggtttagtgagggacaagaattt-aatttttgtcatgtc 8413308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 418
Target Start/End: Original strand, 9153691 - 9153736
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgt 418  Q
    |||||||||  |||||||||| || |||||||||||||||||||||    
T  9153691 aaagttgtgtcgtggtttagtaagcgacaataatttcaatttttgt 9153736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 485
Target Start/End: Complemental strand, 43189281 - 43189171
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||| ||| |||   ||||||| ||  | ||||||||| ||||| |||||||    
T  43189281 aaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttacctccagtttgtcctg--tacctgaaacatttttataaatcaa 43189184  T
Q  473 acaccgtacaact 485  Q
    |||| | ||||||    
T  43189183 acactggacaact 43189171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 476
Target Start/End: Original strand, 16963194 - 16963295
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||  ||||||||  | |||||||| ||| | | |||||||| | || ||||||| | |||||||||||   ||||||||| |||||||||||||    
T  16963194 aaagttgtattgtggtttgataagggacaaaaatatgagtttttgtcctatcccttgcctctagtttgtcatgta--cctgaaacagttttacaaatcaa 16963291  T
Q  473 acac 476  Q
    ||||    
T  16963292 acac 16963295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 4e-24; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 313 - 493
Target Start/End: Complemental strand, 6029474 - 6029296
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    |||| |||||||| ||| |||  ||||||| || |||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||||||| |    
T  6029474 tatgctttttgggggacgaaatgttattttggtgttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagt 6029375  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    ||||||| |||| ||||||||  ||||||  | | ||||||||||| ||||||||||||||||| | ||||||| ||||||    
T  6029374 ttttgtcctgtcccttgccttcagtttgt--tctgtccctgaaacagttttacaaatcaaacactggacaactggagttgt 6029296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 7837194 - 7837312
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    |||||||||||||| ||| || | |||||| || ||||||||||||| |||| ||||||| | ||||||||||  | ||||||||| |||||||||||||    
T  7837194 aaagttgtgatgtgatttggtaatggacaaaaaattcaatttttgtcatgtcccttgcctctagtttgtcatg--ttcctgaaacagttttacaaatcaa 7837291  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | ||||||||||||||    
T  7837292 acactgaacaactgaagttgt 7837312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 16386858 - 16387025
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  |||||||||||||||||| ||||||||||| ||| | | ||||    
T  16386858 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttt 16386957  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| ||||||| | ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  16386958 tgtcctgtcccttgcctctagtttgtcctg--tacctgaaacagttttacaaatcaaacactgaacaact 16387025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 316 - 493
Target Start/End: Original strand, 31004136 - 31004311
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| ||| ||| | |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||  ||| ||||    
T  31004136 gatttttgggggacgaaatactattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaacatcagtttt 31004235  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||| |||| | |||||   ||||||| |||   ||||||||| ||||||||||||||||| | ||||||||||||||    
T  31004236 tgtcctgtcccgtgcctccagtttgtcctgta--cctgaaacagttttacaaatcaaacactggacaactgaagttgt 31004311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 239 - 493
Target Start/End: Complemental strand, 11772877 - 11772627
Alignment:
Q  239 gacataataacacaacacaaggaagaatagtgcgtgacaaactttcatggtattgaattattttttgacaattgtatgatttttgggtgacaaaagatta 338  Q
    ||||||| |||||||||||||| |||||||  |  |||||| ||| ||||| |||||||||||||||    || || |||||||||| ||| ||| | ||    
T  11772877 gacataacaacacaacacaaggcagaatagcacaggacaaatttttatggttttgaattattttttg--ttttatacgatttttgggggacgaaatacta 11772780  T
Q  339 ttttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtt 438  Q
    |||| |||||| | |||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| ||| |||||||| ||||  ||||||   | |    
T  11772779 ttttggtatttaaaacaatttgtaggtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatcagtttttgtcttgtcctttgcctccagat 11772680  T
Q  439 tgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    || | ||  | ||||||||| ||||||||||||||||| | ||||||| ||||||    
T  11772679 tgccttg--tacctgaaacagttttacaaatcaaacactggacaactggagttgt 11772627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 844894 - 844727
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  844894 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 844795  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| ||||||| | ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  844794 tgtcctgtcccttgcctctagtttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 844727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 493
Target Start/End: Complemental strand, 42512940 - 42512765
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||   ||||||  |||||||||||| | |||  | | ||  ||||||||| ||||||||  ||||| |||| ||| ||| ||||    
T  42512940 gatttttgggggacaaaattctattttgatattttagacaatttgtacgtaggacaaaaagttgtgttgtggtttgctgaggcacaaaaatatcagtttt 42512841  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||| ||||||||||||   ||||||| |||   ||||||||| ||||||||||||||||| | ||||||||||||||    
T  42512840 tgtcctgtctcttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaaacactggacaactgaagttgt 42512765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 313 - 493
Target Start/End: Complemental strand, 6144159 - 6143981
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    |||||||||||||||||||||  ||||||| || |||||||||| |  ||  ||| |   ||||||||| ||||||||   ||||||||| |||| || |    
T  6144159 tatgatttttgggtgacaaaatgttatttttgtgttttagacaacttctacgtgggagaaaaagttgtgttgtggtttgccgagggacaaaaattgcagt 6144060  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    ||||||| |||| |||||||   |||||||||||||  |||||||  ||||||||||||||||  | ||||||| ||||||    
T  6144059 ttttgtcctgtcccttgcctccagtttgtcatgtct--ctgaaactgttttacaaatcaaacattggacaactgcagttgt 6143981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 13994188 - 13994070
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| ||||||| ||||||||  ||  |||||||    |||||||||  ||| ||||||| |||||||||||||    
T  13994188 aaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtccagttccttgcctccaatttgtcatg--tccatgaaacagttttacaaatcaa 13994091  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | ||||||||||||||    
T  13994090 acactggacaactgaagttgt 13994070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 317 - 473
Target Start/End: Complemental strand, 41968018 - 41967864
Alignment:
Q  317 atttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaattttt 416  Q
    ||||||||| ||||||||  |||||| ||||||||||||| | |||  ||  ||  ||||||||| |||||||| || |||||||| ||| | | |||||    
T  41968018 atttttgggagacaaaaggctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtaagggacaaaaatatgagttttt 41967919  T
Q  417 gtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaa 473  Q
    ||| |||||||||||| | ||||||| ||  | ||||||||| ||||||||||||||    
T  41967918 gtcttgtctcttgcctctagtttgtcctg--tacctgaaacagttttacaaatcaaa 41967864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 485
Target Start/End: Original strand, 17887954 - 17888119
Alignment:
Q  318 tttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttg 417  Q
    |||| ||| |||||||  ||||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| | ||||||||| ||| | | ||||||    
T  17887954 ttttggggggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaatatgagtttttg 17888053  T
Q  418 tcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    || |||| |||||||   ||||||| |||   ||||||||| ||||||||||||||||||| ||||||    
T  17888054 tcctgtcccttgcctccagtttgtcttgta--cctgaaacagttttacaaatcaaacaccggacaact 17888119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 6711216 - 6711049
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||| ||||| |||||||| ||||||||||| ||| | | ||||    
T  6711216 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaatatgagtttt 6711117  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| ||||||| | ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  6711116 tgtcctgtcccttgcctctagtttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 6711049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 485
Target Start/End: Complemental strand, 1351608 - 1351438
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |    
T  1351608 tatgatttttgagagacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagt 1351509  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    ||||||| |||  |||||||   ||||||| |||   ||||||||| ||||||||||||||||| | ||||||    
T  1351508 ttttgtcctgttccttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaaacactggacaact 1351438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 493
Target Start/End: Original strand, 5109734 - 5109907
Alignment:
Q  317 atttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaattttt 416  Q
    ||||||||| |||||||  ||||||| | ||||||||||| | ||| || | ||  |||||||||||||||||| ||||||||||| ||  | | |||||    
T  5109734 atttttgggggacaaaatgttatttt-gcattttagacaacttgtactttggacaaaaagttgtgatgtggtttggtgagggacaaaaacatgagttttt 5109832  T
Q  417 gtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    ||| |||| |||||||    |||||| ||  | ||||||||| ||||||||||||||||| | ||||||| ||||||    
T  5109833 gtcctgtcccttgcctccaatttgtcttg--tacctgaaacagttttacaaatcaaacactgaacaactggagttgt 5109907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 485
Target Start/End: Original strand, 32270354 - 32270524
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||| | |||||||   ||||||  |||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |    
T  32270354 tatgatttttgagggacaaaatgctattttgatattttagacaacttgtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagt 32270453  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    ||||||| |||| |||||||   |||||||   ||| ||||||||| ||||||||||||||||| | ||||||    
T  32270454 ttttgtcctgtcccttgcctccagtttgtc--ctctacctgaaacagttttacaaatcaaacactggacaact 32270524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 485
Target Start/End: Complemental strand, 35387460 - 35387314
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||||||  ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||| ||| |||   |    
T  35387460 tattttggtattttagacaacttgtacgtggaacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttacctccag 35387361  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  35387360 tttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 35387314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 485
Target Start/End: Original strand, 51264520 - 51264666
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    ||||||||||||||| |||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||| |||||||   |    
T  51264520 tattttagtattttaaacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcttgtcccttgcctccag 51264619  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  51264620 tttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 51264666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 373 - 491
Target Start/End: Original strand, 7837435 - 7837551
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    |||||||||||||| |||  | | |||||| || ||||||||||||| |||| | ||||| | ||||||||||  | ||||||||| ||||| |||||||    
T  7837435 aaagttgtgatgtgatttgataatggacaaaaaattcaatttttgtcatgtcccctgcctctagtttgtcatg--ttcctgaaacagttttataaatcaa 7837532  T
Q  473 acaccgtacaactgaagtt 491  Q
    |||| | ||||||||||||    
T  7837533 acactgaacaactgaagtt 7837551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 375 - 493
Target Start/End: Original strand, 16704789 - 16704905
Alignment:
Q  375 agttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaac 474  Q
    |||||||||||||||| || |||||||| ||| |   ||||||||||||| |||||||   ||||||||||  | ||||||||| |||||||||||||||    
T  16704789 agttgtgatgtggtttggtaagggacaaaaatatatgtttttgtcgtgtcccttgcctccagtttgtcatg--tacctgaaacagttttacaaatcaaac 16704886  T
Q  475 accgtacaactgaagttgt 493  Q
    |  | |||| |||||||||    
T  16704887 attggacaattgaagttgt 16704905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 317 - 494
Target Start/End: Complemental strand, 16476324 - 16476149
Alignment:
Q  317 atttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaattttt 416  Q
    ||||||||| |||||||   |||||| ||||||||||||| | |||  ||| ||  |||||||||  ||||||| ||||||||||| ||| | | |||||    
T  16476324 atttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgccgtggtttggtgagggacaaaaatatgagttttt 16476225  T
Q  417 gtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgtc 494  Q
     || |||| ||||| | | ||||||| |||   ||||||||| ||||||||||||||||| | |||||| || |||||    
T  16476224 atcctgtcccttgcatctagtttgtcctgta--cctgaaacagttttacaaatcaaacactggacaactaaaattgtc 16476149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 328 - 497
Target Start/End: Original strand, 26733571 - 26733738
Alignment:
Q  328 acaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctct 427  Q
    |||||||| |||||| ||||||||||||| | |||  ||   |  ||||||||| | |||||||||| ||||||| ||||||| |||||||| ||||  |    
T  26733571 acaaaagactattttggtattttagacaacttgtacatgaggcaaaaagttgtgttatggtttagtgggggacaagaatttcagtttttgtcatgtccat 26733670  T
Q  428 tgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgtcatg 497  Q
     | || | |||||||  |||  |   ||||| |||||||||||||||| |||||||||||||||||||||    
T  26733671 cgtctctagtttgtccggtc--ctaaaaacagttttacaaatcaaacatcgtacaactgaagttgtcatg 26733738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 45491045 - 45490878
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  45491045 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttt 45490946  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   ||||||| ||  | | ||||||| ||||||||||||||||| | ||||||    
T  45490945 tgtcatgtcccttgcctccagtttgtcctg--tacttgaaacagttttacaaatcaaacactggacaact 45490878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 485
Target Start/End: Complemental strand, 32289493 - 32289347
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| |||||||| |||| | |||  ||||||  ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||| |||||||        
T  32289493 tattttggtattttaaacaacttgtacgtggaacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcttgtcccttgcctccaa 32289394  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  32289393 tttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 32289347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 50304712 - 50304830
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| ||||||||   ||||||||| ||| ||| |||||||| ||| ||||||||   ||||||| |||   ||||||||| |||||||||||||    
T  50304712 aaagttgtgctgtggtttgcagagggacaaaaatatcagtttttgtcttgtttcttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaa 50304809  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | ||||||| ||||||    
T  50304810 acactggacaactggagttgt 50304830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 476
Target Start/End: Complemental strand, 50382576 - 50382412
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||| | |||||||  ||||||| || |||||||||| | |||  ||| ||  ||||||||| |||||||| |||| |||||| ||||||| |    
T  50382576 tatgatttttgagggacaaaatgttatttttgtgttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaatttcagt 50382477  T
Q  413 ttttgtcgtgtctcttgcctttt---gtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    ||||||| ||||  ||||||  |   |||||| |||  ||||||||||| ||||| |||||||||||    
T  50382476 ttttgtcctgtccattgcctcctccagtttgttatg--tccctgaaacagttttaaaaatcaaacac 50382412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 475
Target Start/End: Original strand, 16451131 - 16451288
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||| ||||| ||| | | ||||    
T  16451131 gatttttgagggacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagagacaaaaatatgagtttt 16451230  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaaca 475  Q
    |||| |||| |||||||   ||||||| |||   ||||||||| ||||||||||||||||    
T  16451231 tgtcctgtcccttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaaaca 16451288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 491
Target Start/End: Original strand, 39281918 - 39282071
Alignment:
Q  336 ttattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgcctttt 435  Q
    ||||||| ||||||||||||| | |||  | | ||  ||||||||  |||||||| ||||||||||| ||| | | |||||||| |||| ||||| | |     
T  39281918 ttattttggtattttagacaacttgtacgtaggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcatcta 39282017  T
Q  436 gtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagtt 491  Q
    ||||||| |||   ||| ||||| ||||||||||||||||| | ||||||||||||    
T  39282018 gtttgtcctgta--ccttaaacagttttacaaatcaaacactgaacaactgaagtt 39282071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 504492 - 504388
Alignment:
Q  385 tggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaac 484  Q
    |||||||||||| ||||| | ||||| |||||||  |||| |||||||   ||||||| ||||  ||| |||||||||| |||||||||| | |||||||    
T  504492 tggtttagtgagagacaaaattttcagtttttgtgttgtcccttgcctcaagtttgtcttgtc--cctaaaacaattttgcaaatcaaacgctgtacaac 504395  T
Q  485 tgaagtt 491  Q
    |||||||    
T  504394 tgaagtt 504388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 485
Target Start/End: Original strand, 41972926 - 41973082
Alignment:
Q  327 gacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctc 426  Q
    |||||||  ||||||| ||||||||||||| | |||  ||  ||  ||||||||  |||||||| ||||||||||| ||| | | |||||||| |||| |    
T  41972926 gacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtagtgtggtttggtgagggacaaaaatatgagtttttgtcatgtccc 41973025  T
Q  427 ttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    ||||||   ||||||| ||| |  |||||||| ||||||||||||||||| | ||||||    
T  41973026 ttgcctccagtttgtcctgtat--ctgaaacagttttacaaatcaaacactggacaact 41973082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 454 - 497
Target Start/End: Complemental strand, 47242550 - 47242507
Alignment:
Q  454 aaacaattttacaaatcaaacaccgtacaactgaagttgtcatg 497  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  47242550 aaacaattttacaaattaaacaccatacaactgaagttgtcatg 47242507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 493
Target Start/End: Complemental strand, 26764965 - 26764790
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | ||| ||| |||||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||  ||||||||||| ||| | | ||||    
T  26764965 gatttttgagggacgaaatattattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggttcggtgagggacaaaaatataagtttt 26764866  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||| ||||  ||||||   |||| || ||  | ||| |||||||| |||||||||||||| | ||||||| ||||||    
T  26764865 tgtcctgtcctttgcctccagtttatcttg--tacctaaaacaattgtacaaatcaaacactggacaactggagttgt 26764790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 28340473 - 28340306
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||  ||  ||||||||| ||||||||  |||||||||| ||| | | ||||    
T  28340473 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttgatgagggacaaaaatatgagtttt 28340374  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   ||||||| |||   ||||||||| ||||||||||||||||| | ||||||    
T  28340373 tgtcttgtcccttgcctccagtttgtcttgta--cctgaaacagttttacaaatcaaacactggacaact 28340306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 30105850 - 30105683
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  |||||| || |||||||| ||||||||||| ||| | | ||||    
T  30105850 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttatgctgtggtttggtgagggacaaaaatatgagtttt 30105751  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   |||||||   | | ||||||||| ||||||||||||||||| | ||||||    
T  30105750 tgtcctgtcccttgcctccagtttgtc--ctttacctgaaacagttttacaaatcaaacactggacaact 30105683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 497
Target Start/End: Original strand, 6771429 - 6771551
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||| ||||||||| ||||| ||||| | |||||||| |||| |||| || |  ||| |||||||  ||| ||||| ||||| |||||||    
T  6771429 aaagttgtgttgtgatttagtgagtgacaagaattttagtttttgtcttgtcccttgtctctaatttatcatgtc--cctaaaacagttttataaatcaa 6771526  T
Q  473 acaccgtacaactgaagttgtcatg 497  Q
    |||||| |||| | || ||||||||    
T  6771527 acaccgcacaaataaaattgtcatg 6771551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 336 - 496
Target Start/End: Original strand, 39792831 - 39792989
Alignment:
Q  336 ttattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgcctttt 435  Q
    |||||||| |||||||||||| | |||  || |||   |||||||| |||||||| |||| |||||| |||||||||||||||| | ||| ||| ||       
T  39792831 ttattttattattttagacaatttgtacgtgaaacaacaagttgtgttgtggtttggtgaaggacaagaatttcaatttttgtcatatcttttgtctcca 39792930  T
Q  436 gtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgtcat 496  Q
     ||| || ||  ||||| ||||| |||| |||||||||||| |||||||  ||||||||||    
T  39792931 atttatcttg--tccctaaaacagttttgcaaatcaaacactgtacaacctaagttgtcat 39792989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 313 - 485
Target Start/End: Original strand, 50540345 - 50540515
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||||| |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| ||||||||  ||| |||||| ||| | | |    
T  50540345 tatgatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgatgaaggacaaaaatatgagt 50540444  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    || |||| |||| |||||||   ||||||| ||  | ||| ||||| ||||||||||||||||| | ||||||    
T  50540445 ttatgtcctgtcccttgcctccagtttgtcctg--tacctaaaacagttttacaaatcaaacactggacaact 50540515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 493
Target Start/End: Original strand, 7146900 - 7146939
Alignment:
Q  454 aaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  7146900 aaacaattttacaaatcaaacactatacaactgaagttgt 7146939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 16437423 - 16437523
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| ||| | | |||||||| ||||  |||||| | ||||||| ||  |  |||||||| |||||||||||||    
T  16437423 aaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctctagtttgtcctg--tagctgaaacagttttacaaatcaa 16437520  T
Q  473 aca 475  Q
    |||    
T  16437521 aca 16437523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 493
Target Start/End: Original strand, 21071750 - 21071793
Alignment:
Q  450 cctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    ||||||||||||||||||||||||||| | |||| |||||||||    
T  21071750 cctgaaacaattttacaaatcaaacactggacaattgaagttgt 21071793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 494
Target Start/End: Original strand, 42510529 - 42510705
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||| ||||| ||| | | ||||    
T  42510529 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagagacaaaaatatgagtttt 42510628  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgtc 494  Q
    |||| |||| |||| ||   ||||||| ||  | ||||||||| |||||| |||||||||| | ||||||  |||||||    
T  42510629 tgtcctgtcccttgtctccagtttgtcctg--tacctgaaacagttttacgaatcaaacactggacaactagagttgtc 42510705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 485
Target Start/End: Complemental strand, 24339752 - 24339641
Alignment:
Q  373 aaagttgtgatgtggtttag-tgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatca 471  Q
    ||||||||| |||||||| | |||||||||| ||| | | |||||||| |||| |||||||   |||||||||||   ||||||||| || |||||||||    
T  24339752 aaagttgtgttgtggttttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgta--cctgaaacagttatacaaatca 24339655  T
Q  472 aacaccgtacaact 485  Q
    ||||| | ||||||    
T  24339654 aacactgaacaact 24339641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 26118385 - 26118218
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| |  ||  ||| ||  ||||||||| |||| ||| ||||||||||| ||| | | ||||    
T  26118385 gatttttgagggacaaaatgctattttggtattttagacaacttttacgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagtttt 26118286  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| ||||  ||||||   ||||||| |||   ||||||||| ||||||||||||||||| | ||||||    
T  26118285 tgtcctgtcctttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaaacactggacaact 26118218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 34283929 - 34283883
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtc 419  Q
    ||||||||| ||||||||| |||  ||||||||||||||||||||||    
T  34283929 aaagttgtgttgtggtttattgaaagacaataatttcaatttttgtc 34283883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 493
Target Start/End: Original strand, 1601171 - 1601350
Alignment:
Q  310 ttgtatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttc 409  Q
    ||||| |||||||||  |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||  |     
T  1601171 ttgtacgatttttggtggacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaa--tg 1601268  T
Q  410 aatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    | |||||||  | || |||||||   ||||||| ||  | ||||||||  ||||||||||||||||| | |||||| |||||||    
T  1601269 agtttttgttctatcccttgcctccagtttgtcctg--tacctgaaaccgttttacaaatcaaacactgaacaactaaagttgt 1601350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 424
Target Start/End: Complemental strand, 38087135 - 38087058
Alignment:
Q  347 ttttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtc 424  Q
    |||||||||| | ||| |||| ||  ||||||||||||||||||||||| |||||| ||| | | |||||||| ||||    
T  38087135 ttttagacaacttgtacttgggacaaaaagttgtgatgtggtttagtgaaggacaaaaatatgagtttttgtcatgtc 38087058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 454 - 494
Target Start/End: Original strand, 17291718 - 17291758
Alignment:
Q  454 aaacaattttacaaatcaaacaccgtacaactgaagttgtc 494  Q
    ||||| |||||||||||||| |||||||||||| |||||||    
T  17291718 aaacagttttacaaatcaaataccgtacaactggagttgtc 17291758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 433
Target Start/End: Original strand, 25539916 - 25539976
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgcctt 433  Q
    ||||||||| |||||||| ||||||||||| ||| ||| |||||||| ||||  |||||||    
T  25539916 aaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcttgtcctttgcctt 25539976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 9e-22; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 313 - 493
Target Start/End: Complemental strand, 20802622 - 20802444
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  |||||||||||||||||| ||||||||||| ||| | | |    
T  20802622 tatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagt 20802523  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    ||||||| ||||||||||||   ||||||| ||  | ||||||||| ||||||||||||||||| | | |||| |||||||    
T  20802522 ttttgtcctgtctcttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaacactggataactaaagttgt 20802444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 347 - 493
Target Start/End: Original strand, 26083368 - 26083512
Alignment:
Q  347 ttttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgt 446  Q
    |||||||||| | |||| ||| ||  |||||| || |||||||| ||||||||||| ||||||| |||||||| |||| |||||||   ||||||  | |    
T  26083368 ttttagacaacttgtaagtgggacaaaaagttatgctgtggtttggtgagggacaaaaatttcagtttttgtcatgtcccttgcctccagtttgt--tct 26083465  T
Q  447 ctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
     |||||||||||||||||||||||||||||   ||||||||||||||    
T  26083466 gtccctgaaacaattttacaaatcaaacactaaacaactgaagttgt 26083512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 493
Target Start/End: Original strand, 3649631 - 3649809
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    |||| |||||||| ||| |||  ||||||| || |||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||||| | |    
T  3649631 tatgttttttgggggacgaaatgttattttggtgttttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaattttagt 3649730  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    ||||||| |||| ||||||||  ||||||  | | ||||||||||| |||||||||||||||||   ||||||| ||||||    
T  3649731 ttttgtcctgtcccttgccttcagtttgt--tctgtccctgaaacagttttacaaatcaaacactagacaactggagttgt 3649809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 493
Target Start/End: Original strand, 39078656 - 39078834
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||||| |||||||  ||||||| || |||||||||| | |||  | | ||  ||| ||||| |||||||| ||||||||||| |||||||      
T  39078656 tatgatttttgggggacaaaatgttattttggtgttttagacaactcgtacgtaggacaaaaatttgtgttgtggtttggtgagggacaaaaatttcagg 39078755  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    ||||||| | ||||||||||   ||||||  | | ||||||||||| ||||||||||||||||| | ||||||| ||||||    
T  39078756 ttttgtcctatctcttgcctccagtttgt--tctgtccctgaaacagttttacaaatcaaacactggacaactggagttgt 39078834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 476
Target Start/End: Complemental strand, 50728001 - 50727843
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||  ||||||| ||||||||||||| | |||  ||| ||  ||||||||| ||||||||  |||||||||| ||| | | ||||    
T  50728001 gatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaatatgagtttt 50727902  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    |||| |||| ||||||||  ||||||||||  | ||||||||| |||||||||||||||||    
T  50727901 tgtcctgtcccttgccttcagtttgtcatg--tacctgaaacagttttacaaatcaaacac 50727843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 476
Target Start/End: Complemental strand, 50736015 - 50735857
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||  ||||||| ||||||||||||| | |||  ||| ||  ||||||||| ||||||||  |||||||||| ||| | | ||||    
T  50736015 gatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgatgagggacaaaaatatgagtttt 50735916  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    |||| |||| ||||||||  ||||||||||  | ||||||||| |||||||||||||||||    
T  50735915 tgtcctgtcccttgccttcagtttgtcatg--tacctgaaacagttttacaaatcaaacac 50735857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 373 - 476
Target Start/End: Complemental strand, 22318415 - 22318314
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| |||||||| ||||||| |||||||||||||  ||||||  | | ||||| ||||| |||||||||||||    
T  22318415 aaagttgtgttgtggtttggtgagggacaaaaatttcaaattttgtcctgtctcttgccttcagtttgt--tctgtccctaaaacagttttacaaatcaa 22318318  T
Q  473 acac 476  Q
    ||||    
T  22318317 acac 22318314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 474
Target Start/End: Original strand, 10587097 - 10587189
Alignment:
Q  380 tgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaac 474  Q
    |||||||||||| ||| |||||||||||||| |||||||| |||||| ||||||| ||||||||||  | | |||| ||||||||||||||||||    
T  10587097 tgatgtggtttaatgaaggacaataatttcagtttttgtcttgtctcatgcctttggtttgtcatg--ttcttgaaccaattttacaaatcaaac 10587189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 33177120 - 33176953
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||  ||||||| ||||||||||||| | ||   ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  33177120 gatttttgggggacaaaatgttattttggtattttagacaacttgtgcgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttt 33177021  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  33177020 tgtcctgtcccttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 33176953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 11056097 - 11056215
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| || |||||||| ||| ||| |||||||| |||| |||||||   ||||||| |||   ||||||||| |||||||||||||    
T  11056097 aaagttgtgttgtggtttggtaagggacaaaaatatcagtttttgtcttgtcccttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaa 11056194  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | ||||||||||||||    
T  11056195 acactggacaactgaagttgt 11056215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 44324373 - 44324255
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| ||| ||| ||||||||  |||| |||||| | ||||||| ||  | ||||||||| |||||||||||||    
T  44324373 aaagttgtgctgtggtttggtgagggacaaaaatatcagtttttgtcccgtcttttgcctctagtttgtcctg--tacctgaaacagttttacaaatcaa 44324276  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | ||||||| ||||||    
T  44324275 acactgaacaactggagttgt 44324255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 50178523 - 50178405
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| ||||||||  ||||| |||| ||| ||| |||||||| ||||||||||||   ||||||| |||   ||||||||| |||||||||||||    
T  50178523 aaagttgtgctgtggtttgctgaggcacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaa 50178426  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | ||||||||||||||    
T  50178425 acactggacaactgaagttgt 50178405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 50729573 - 50729455
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||  ||||| ||||||| |||||||| |||| |||||||   ||||||  ||||  ||||||||| |||||||||||||    
T  50729573 aaagttgtgctgtggtttggtgatagacaaaaatttcagtttttgtcatgtcccttgcctccagtttgttctgtc--cctgaaacagttttacaaatcaa 50729476  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | ||||||||||||||    
T  50729475 acactggacaactgaagttgt 50729455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 373 - 496
Target Start/End: Original strand, 9947984 - 9948105
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    |||||||| |||||||||||||||||| || ||||| | |||||||| ||||||||||||   ||||||||||  | ||| ||||| |||||||||||||    
T  9947984 aaagttgtaatgtggtttagtgagggataagaattttagtttttgtcatgtctcttgcctcaagtttgtcatg--ttccttaaacagttttacaaatcaa 9948081  T
Q  473 acaccgtacaactgaagttgtcat 496  Q
    |||   ||||| |||| |||||||    
T  9948082 acattatacaattgaaattgtcat 9948105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 373 - 476
Target Start/End: Original strand, 42772843 - 42772944
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| |||| |||||| ||| | | |||||||| ||||||||||||   ||||||||||  | |||||||||||||||||||||||    
T  42772843 aaagttgtgttgtggtttggtgaaggacaaaaatatgagtttttgtcttgtctcttgcctcaagtttgtcatg--tacctgaaacaattttacaaatcaa 42772940  T
Q  473 acac 476  Q
    ||||    
T  42772941 acac 42772944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 373 - 483
Target Start/End: Original strand, 24210374 - 24210482
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||||||| | | |||||||| |||| |||||||   ||||||| ||  | ||||||||| |||||||||||||    
T  24210374 aaagttgtgctgtggtttggtgagggacaataatatgagtttttgtcctgtcccttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaa 24210471  T
Q  473 acaccgtacaa 483  Q
    |||||| ||||    
T  24210472 acaccggacaa 24210482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 473
Target Start/End: Complemental strand, 44649252 - 44649097
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||   ||||||  |||||||||||| | |||  ||| ||  ||||||||| ||||||||  |||||||||| ||| ||| ||||    
T  44649252 gatttttgggggacaaaatgctattttgatattttagacaacttgtacatgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagtttt 44649153  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaa 473  Q
    |||| ||||||||||||   ||||||| ||  | ||||||||| ||||||||||||||    
T  44649152 tgtcctgtctcttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaa 44649097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 493
Target Start/End: Complemental strand, 47642579 - 47642404
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||   ||||||  |||||||||||| | |||  ||| ||  ||||||||| ||||||||  |||||||||| ||| ||| ||||    
T  47642579 gatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagtttt 47642480  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    | || |||||||| |||   ||||||| |||   ||||||||| ||||||||||||||||| | ||||||| ||||||    
T  47642479 tatcttgtctcttacctccagtttgtcctgtg--cctgaaacagttttacaaatcaaacactgaacaactggagttgt 47642404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 52949718 - 52949885
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||   ||||||  |||||||||||| | |||  ||| ||  ||||||||| ||||||||  |||||||||| ||| ||| ||||    
T  52949718 gatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagtttt 52949817  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| ||||||||||||   ||||||| ||  | ||||||||| |||||||||| |||||| | ||||||    
T  52949818 tgtcctgtctcttgcctccagtttgtcctg--tacctgaaacagttttacaaatgaaacactggacaact 52949885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 497
Target Start/End: Original strand, 32181282 - 32181440
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||| ||  ||||||||  |||||||| ||||||||||| ||| | | |||||||| |||| ||||| | | |    
T  32181282 tattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcatctag 32181381  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgtcatg 497  Q
    |||||| |||   | ||||||| ||||||||||||||||| | |||||| |||||||||||    
T  32181382 tttgtcctgta--cttgaaacagttttacaaatcaaacactggacaactaaagttgtcatg 32181440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 485
Target Start/End: Original strand, 36497272 - 36497382
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    |||||||||||||||||| ||||||||||| ||| | | |||||||| ||||||||| ||   ||||||| ||  | ||||||||| |||||||||||||    
T  36497272 aaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgtctccagtttgtcctg--tacctgaaacagttttacaaatcaa 36497369  T
Q  473 acaccgtacaact 485  Q
    |||| | ||||||    
T  36497370 acactggacaact 36497382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 485
Target Start/End: Original strand, 37865772 - 37865918
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||| ||| ||||||||||| ||| | | |||||||| ||||||||||||   |    
T  37865772 tattttggtattttagacaacttgtacatgggacaaaaagttgtgttgtgatttggtgagggacaaaaatatgagtttttgtcatgtctcttgcctccag 37865871  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
     ||||||||  | ||||||||| ||||||||||||||||| | ||||||    
T  37865872 attgtcatg--tacctgaaacagttttacaaatcaaacactggacaact 37865918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 485
Target Start/End: Original strand, 38812539 - 38812685
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||| |||||||   |    
T  38812539 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccag 38812638  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  38812639 tttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 38812685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 493
Target Start/End: Original strand, 56154616 - 56154794
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |    
T  56154616 tatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagt 56154715  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    ||||||  |||| |||||||   |||| || ||  | ||||||||| ||||||||||||||||| | |||||| |||||||    
T  56154716 ttttgttctgtcccttgcctccagtttttcctg--tacctgaaacagttttacaaatcaaacactggacaactaaagttgt 56154794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 493
Target Start/End: Original strand, 44640415 - 44640496
Alignment:
Q  410 aatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||||||||| |||||||||||| | ||||||||| | ||| | ||||| ||||||||||||||||| ||||||||||||||||    
T  44640415 aatttttgtcttgtctcttgcctctagtttgtcattt-tccat-aaacagttttacaaatcaaacactgtacaactgaagttgt 44640496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 1231309 - 1231476
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||  |||||||  |||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  1231309 gatttttgagggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgtgctgtggttttgtgagggacaaaaatatgagtttt 1231408  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    ||||  |||||||||||   |||| || ||  | ||||||||| ||||||||||||||||| | ||||||    
T  1231409 tgtccagtctcttgcctccagtttatcctg--tacctgaaacagttttacaaatcaaacactggacaact 1231476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 4325789 - 4325956
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| || ||||| ||||| ||||| ||| | | ||||    
T  4325789 gatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgcggttttgtgagagacaaaaatatgagtttt 4325888  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    | || |||| |||||||   |||||||||||   ||||||||| ||||||||||||||||| | ||||||    
T  4325889 tctcctgtcccttgcctccagtttgtcatgta--cctgaaacagttttacaaatcaaacactgaacaact 4325956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 25978642 - 25978525
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||||| |||||| ||||||||||| ||||||| |||||||| |||   ||||||    ||||||||||   ||||||||| |||||||||||||    
T  25978642 aaagttgtgatatggtttggtgagggacaaaaatttcagtttttgtcctgttcattgcctccaatttgtcatgt---cctgaaacagttttacaaatcaa 25978546  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | | || |||||||||    
T  25978545 acactggataattgaagttgt 25978525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 485
Target Start/End: Original strand, 24002358 - 24002504
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||| |||||||   |    
T  24002358 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccag 24002457  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||||| ||  | ||||||||  ||||||||||||||||| | ||||||    
T  24002458 tttgtcctg--tacctgaaactgttttacaaatcaaacactggacaact 24002504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 485
Target Start/End: Complemental strand, 36743755 - 36743609
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||| ||  ||||||||| ||| |||| ||||||||||| ||| | |||||||||| |||| |||||||   |    
T  36743755 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtagtttggtgagggacaaaaatatgaatttttgtcatgtcccttgcctccag 36743656  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||||| ||  | ||||||||| |||||||| |||||||| | ||||||    
T  36743655 tttgtcctg--tacctgaaacagttttacaattcaaacactgaacaact 36743609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 485
Target Start/End: Original strand, 36885987 - 36886097
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||| |||||||   ||||||| ||  | ||||||||| |||||||||||||    
T  36885987 aaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttg--tacctgaaacagttttacaaatcaa 36886084  T
Q  473 acaccgtacaact 485  Q
    |||| | ||||||    
T  36886085 acactggacaact 36886097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 47361444 - 47361327
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| ||| | |||||| ||| |||| |||||||   ||||||| |||   ||||||||| |||||||||||||    
T  47361444 aaagttgtgttgtggtttggtgagggacaaaaatatgaatttt-gtcttgtcccttgcctccggtttgtcctgta--cctgaaacagttttacaaatcaa 47361348  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | |||||| |||||||    
T  47361347 acactggacaactaaagttgt 47361327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 485
Target Start/End: Original strand, 42870027 - 42870136
Alignment:
Q  374 aagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaa 473  Q
    |||||||| |||||||| ||||||||||| ||| | | |||||||| |||||||||||    ||||||| ||  | || |||||| ||||||||||||||    
T  42870027 aagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcccccagtttgtcctg--taccagaaacagttttacaaatcaaa 42870124  T
Q  474 caccgtacaact 485  Q
    ||||| ||||||    
T  42870125 caccggacaact 42870136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 424
Target Start/End: Original strand, 43739479 - 43739567
Alignment:
Q  336 ttattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtc 424  Q
    |||||||| |||||||||||| | |||  ||| ||  || |||||| |||||||| ||||||||||||||||||| |||||||| ||||    
T  43739479 ttattttaatattttagacaacttgtatgtgggacaaaatgttgtgttgtggtttggtgagggacaataatttcagtttttgtcatgtc 43739567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 476
Target Start/End: Complemental strand, 53200674 - 53200573
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| ||||||| |||||||| |||  |||||||   |||| || |||||  |||||||| |||| ||||||||    
T  53200674 aaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcatgttccttgcctccagtttatcctgtct--ctgaaacagttttgcaaatcaa 53200577  T
Q  473 acac 476  Q
    ||||    
T  53200576 acac 53200573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 336 - 419
Target Start/End: Original strand, 21098552 - 21098635
Alignment:
Q  336 ttattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtc 419  Q
    |||||||||||||||||||||||  ||  ||  ||  |||||| || |||||||||||||| ||||| ||||||||||||||||    
T  21098552 ttattttagtattttagacaaattttacgtgcgacaaaaagttatgttgtggtttagtgagagacaagaatttcaatttttgtc 21098635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 337 - 432
Target Start/End: Original strand, 28115271 - 28115366
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgcct 432  Q
    |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| ||||||||| || |||| |||||||    
T  28115271 tattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcaatttttctcctgtcccttgcct 28115366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 485
Target Start/End: Complemental strand, 2630019 - 2629872
Alignment:
Q  336 ttattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgcctttt 435  Q
    ||||||| ||||||||||||| | |||  ||  ||  ||||||||||| |||| | ||||||||||| ||| | | |||||||| ||||  |||||| |     
T  2630019 ttattttggtattttagacaacttgtacgtgagacaaaaagttgtgatttggtctggtgagggacaaaaatatgagtttttgtcatgtcctttgcctcta 2629920  T
Q  436 gtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    ||||||| |||   ||||||||| ||||||||||||||||| | ||||||    
T  2629919 gtttgtcctgta--cctgaaacagttttacaaatcaaacacgggacaact 2629872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 2725220 - 2725054
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  |||| |  |||||||||||||||||| ||||||||||| ||| | | ||||    
T  2725220 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgga-caaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttt 2725122  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   ||||||| ||  | ||| ||| | ||||||||||||||||| | ||||||    
T  2725121 tgtcctgtcccttgcctccagtttgtcctg--tacctaaaagagttttacaaatcaaacactggacaact 2725054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 21202738 - 21202904
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||   ||||||  |||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| | | | | ||||    
T  21202738 gatttttggg-gacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaattatgagtttt 21202836  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| ||||||||||||   ||||||| ||  | ||| ||||| ||||||||||||||||| | ||||||    
T  21202837 tgtcctgtctcttgcctccagtttgtcctg--taccttaaacagttttacaaatcaaacactggacaact 21202904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 33552930 - 33552763
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  33552930 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 33552831  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| ||||| |    |||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  33552830 tgtcttgtcccttgcatccaatttgtcctg--tacctgaaacagttttacaaatcaaacactgaacaact 33552763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 473
Target Start/End: Original strand, 55593883 - 55594038
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||  ||||||| ||||||||||||| | |||  ||| |   ||||||||| |||||||| ||||||||| | ||| | | ||||    
T  55593883 gatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggataaaaagttgtgctgtggtttggtgagggactaaaatatgagtttt 55593982  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaa 473  Q
    |||| |||| |||||||   |||| ||||||   ||||||||| ||||||||||||||    
T  55593983 tgtcctgtcccttgcctccagtttatcatgta--cctgaaacagttttacaaatcaaa 55594038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 337 - 485
Target Start/End: Complemental strand, 20518089 - 20517943
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||| ||   ||||| || |||| ||| ||||||||||| ||| | | |||||||| ||||||||||||   |    
T  20518089 tattttggtattttagacaacttgtacgtgggacaagaagttatgctgtgatttggtgagggacaaaaatatgactttttgtcctgtctcttgcctccag 20517990  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||||| |||   ||||||||| ||||||||||||||||| | ||||||    
T  20517989 tttgtcttgta--cctgaaacagttttacaaatcaaacactgaacaact 20517943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 473
Target Start/End: Original strand, 21580081 - 21580179
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    |||||||||||||||||| ||||||||||| ||| | | |||||||| |||| |||||||    |||||| ||  | ||||||||| |||||||||||||    
T  21580081 aaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcctg--tacctgaaacagttttacaaatcaa 21580178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 485
Target Start/End: Complemental strand, 46680541 - 46680431
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| || |||||||| ||| | | |||||||| |||| |||||||   ||||||| |||   ||||||||| |||||||||||||    
T  46680541 aaagttgtgctgtggtttggtaagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaa 46680444  T
Q  473 acaccgtacaact 485  Q
    |||| | ||||||    
T  46680443 acactgaacaact 46680431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 49152131 - 49152013
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| ||| | | ||||||||||||| ||||| |   ||||||| ||  | ||||||||| |||||||||| ||    
T  49152131 aaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcgtgtcccttgcatccagtttgtcttg--tacctgaaacagttttacaaattaa 49152034  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | | |||| |||||||    
T  49152033 acactggataactaaagttgt 49152013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 497
Target Start/End: Original strand, 7381387 - 7381431
Alignment:
Q  453 gaaacaattttacaaatcaaacaccgtacaactgaagttgtcatg 497  Q
    |||||||||||||||||||||||||||| || || ||||||||||    
T  7381387 gaaacaattttacaaatcaaacaccgtataattggagttgtcatg 7381431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 494
Target Start/End: Original strand, 9807285 - 9807329
Alignment:
Q  450 cctgaaacaattttacaaatcaaacaccgtacaactgaagttgtc 494  Q
    ||||||||| ||||||||||||||||| | |||||||||||||||    
T  9807285 cctgaaacagttttacaaatcaaacactggacaactgaagttgtc 9807329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 475
Target Start/End: Original strand, 52319321 - 52319478
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||  |||||||   ||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  52319321 gatttttgagggacaaaatgttattttgacattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 52319420  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaaca 475  Q
     ||| |||| |||||||   ||||||| ||  | ||||||||| ||||||||||||||||    
T  52319421 cgtcctgtcccttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaaca 52319478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 428
Target Start/End: Complemental strand, 44355881 - 44355830
Alignment:
Q  377 ttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctctt 428  Q
    ||||| ||||||||| |||||||||| |||||||||||||||| | ||||||    
T  44355881 ttgtgttgtggtttaatgagggacaaaaatttcaatttttgtcctctctctt 44355830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 485
Target Start/End: Original strand, 41711902 - 41712012
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||  |||||||| ||||||||||| ||| | | | |||||| |||| ||||||||  ||||||| ||  | |||||||||  ||||||||||||    
T  41711902 aaagttgtactgtggtttggtgagggacaaaaatatgagtctttgtcctgtcccttgccttcagtttgtcctg--tacctgaaacagctttacaaatcaa 41711999  T
Q  473 acaccgtacaact 485  Q
    |||| | ||||||    
T  41712000 acactggacaact 41712012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 36705917 - 36705973
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttg 429  Q
    |||| |||||||||||||||  |||||||| | ||||| |||||||| |||||||||    
T  36705917 aaagatgtgatgtggtttagcaagggacaagagtttcagtttttgtcatgtctcttg 36705973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 424
Target Start/End: Original strand, 43641097 - 43641205
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  43641097 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 43641196  T
Q  416 tgtcgtgtc 424  Q
    |||| ||||    
T  43641197 tgtcctgtc 43641205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 476
Target Start/End: Original strand, 33889235 - 33889396
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||| | |||||||  ||||||| ||||||||||||| | |||  ||| ||  |||||||||||||||||| |||||||| || ||| | | |    
T  33889235 tatgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggaaaaaaatatgagt 33889334  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    ||||||| |||| |||||||   ||||||| ||| |  ||||||||||||||||||||||||||    
T  33889335 ttttgtcctgtcccttgcctccagtttgtcctgtat--ctgaaacaattttacaaatcaaacac 33889396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 327 - 485
Target Start/End: Original strand, 32497921 - 32498077
Alignment:
Q  327 gacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctc 426  Q
    |||||||  ||||||| ||||||||||||| | |||  ||| ||  |||||||||||||||||| |||||| |||| ||| | | |||||||| |||| |    
T  32497921 gacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgaggtacaaaaatatgagtttttgtcctgtccc 32498020  T
Q  427 ttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||||||  ||||||||||  | ||||||||| ||||||||||||||||| | ||||||    
T  32498021 ttgccttcagtttgtcatg--tacctgaaacagttttacaaatcaaacactggacaact 32498077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 7761668 - 7761501
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||  ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  7761668 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 7761569  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| ||||||| | ||||||||||  | ||||||||| ||||||||||||||||| | ||||||    
T  7761568 tgtcctgtcccttgcctctagtttgtcatg--tacctgaaacagttttacaaatcaaacactggacaact 7761501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 6896220 - 6896338
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| ||| |||| ||||||||||| ||||||| ||||| || |||| |||||||   ||||||  | | ||||||||||| |||||||||||||    
T  6896220 aaagttgtgctgttgtttggtgagggacaaaaatttcagtttttatcctgtcccttgcctccagtttgt--tttgtccctgaaacagttttacaaatcaa 6896317  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | ||||||||||||||    
T  6896318 acactggacaactgaagttgt 6896338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 373 - 476
Target Start/End: Complemental strand, 32766542 - 32766441
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| ||| ||| |||||||| |||| |||||||   ||||||||||  | ||||||||| |||||||||||||    
T  32766542 aaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcctgtcccttgcctccagtttgtcatg--tacctgaaacagttttacaaatcaa 32766445  T
Q  473 acac 476  Q
    ||||    
T  32766444 acac 32766441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 327 - 485
Target Start/End: Original strand, 37308661 - 37308817
Alignment:
Q  327 gacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctc 426  Q
    ||||||| | |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||| |    
T  37308661 gacaaaatactattttggtattttagacaatttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtccc 37308760  T
Q  427 ttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    ||||||   ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  37308761 ttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 37308817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 485
Target Start/End: Complemental strand, 3913534 - 3913388
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||||||  ||||||||| |||||||| |||||||||||  || | | |||||||| ||| ||||||||   |    
T  3913534 tattttggtattttagacaacttgtacgtggaacaaaaagttgtgttgtggtttggtgagggacaaacatgtgagtttttgtcctgtttcttgcctccag 3913435  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||||||  | | ||||||||| ||||||||||||||||| | ||||||    
T  3913434 tttgtca--tatacctgaaacagttttacaaatcaaacactggacaact 3913388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 477
Target Start/End: Complemental strand, 5278908 - 5278770
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||| ||  ||| ||||| |||||||| ||||||||||| ||| | | |||||||| |||| |||||||   |    
T  5278908 tattttggtattttagacaacttgtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccag 5278809  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacacc 477  Q
    |||||||||  | ||||||||| ||||||||||||||||||    
T  5278808 tttgtcatg--tacctgaaacagttttacaaatcaaacacc 5278770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 10399908 - 10399790
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| ||||||||||||| |||||| ||| | | |||||||| ||| |||||| | | ||||||| |||   ||||||| | |||||||||||||    
T  10399908 aaagttgtgttgtggtttagtgaaggacaaaaatatgagtttttgtcctgtatcttgcatctagtttgtcctgta--cctgaaatagttttacaaatcaa 10399811  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | ||||||||||||||    
T  10399810 acactgaacaactgaagttgt 10399790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 476
Target Start/End: Original strand, 35114780 - 35114938
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||| ||||| |||||||| ||||||||||| ||| | | ||||    
T  35114780 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaatatgagtttt 35114879  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    |||| |||| ||||||| | ||||||| ||  | ||||||||| |||||||||||||||||    
T  35114880 tgtcctgtcccttgcctctagtttgtcctg--tacctgaaacagttttacaaatcaaacac 35114938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 195
Target Start/End: Original strand, 35948241 - 35948358
Alignment:
Q  78 caaatcattattagaatatgtctaatgttaaaaacaatcgaacagttaaatcaggttaagtctcaaaagtagggttagtgatcattgagacctagatcgg 177  Q
    ||||| ||||||||||||| ||||| | ||  || ||| ||||| |||||| |||| ||| | ||||| ||| |||||| |||||||| || ||||||||    
T  35948241 caaattattattagaatatttctaaagctagtaaaaattgaacaattaaattaggtcaagccccaaaattagagttagtaatcattgaaacttagatcgg 35948340  T
Q  178 tttatggacattcgtaaa 195  Q
    |||||| |||||||||||    
T  35948341 tttatgaacattcgtaaa 35948358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 38623342 - 38623224
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| ||||||| |||||||| | ||  ||||||   ||||||| ||  ||||||||||| |||||||||||||    
T  38623342 aaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcttttccattgcctcaagtttgtcctg--tccctgaaacagttttacaaatcaa 38623245  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||  | | ||||||||||||    
T  38623244 acattggataactgaagttgt 38623224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 485
Target Start/End: Original strand, 44284681 - 44284791
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||||||||||||||| ||| | | |||||||| |||| |||||||   ||||||| ||  | ||||||||| |||||||||||||    
T  44284681 aaagttgtgctgtggtttagtgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcttg--tacctgaaacagttttacaaatcaa 44284778  T
Q  473 acaccgtacaact 485  Q
    |||| | ||||||    
T  44284779 acactgaacaact 44284791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 475
Target Start/End: Complemental strand, 41366185 - 41366048
Alignment:
Q  336 ttattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgcctttt 435  Q
    ||||||| ||||||||||||| | |||  ||  ||  ||| ||||| |||||||| ||||||||||| ||||||| |||||||| | ||||||||||       
T  41366185 ttattttggtattttagacaacttgtatgtgagacaaaaaattgtgttgtggtttggtgagggacaaaaatttcagtttttgtcctatctcttgcctcca 41366086  T
Q  436 gtttgtcatgtctccctgaaacaattttacaaatcaaaca 475  Q
    ||||||||||  ||||||||||  ||| ||||||||||||    
T  41366085 gtttgtcatg--tccctgaaactgtttcacaaatcaaaca 41366048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 475
Target Start/End: Complemental strand, 19513787 - 19513627
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |    
T  19513787 tatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagt 19513688  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaaca 475  Q
    ||||||| ||||  ||||||   ||||||| ||  | ||||||||| ||||||||||||||||    
T  19513687 ttttgtcctgtcctttgcctcccgtttgtcctg--tacctgaaacagttttacaaatcaaaca 19513627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 431
Target Start/End: Complemental strand, 35170252 - 35170193
Alignment:
Q  372 gaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgcc 431  Q
    |||||||||| ||| ||| || ||||||||| ||||||||||||||||||||||||||||    
T  35170252 gaaagttgtgttgttgttcagcgagggacaaaaatttcaatttttgtcgtgtctcttgcc 35170193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 9733025 - 9732858
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   ||||||  |||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  9733025 gatttttgagggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttt 9732926  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  9732925 tgtcttgtcccttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 9732858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 18685831 - 18685998
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||  |||||||| |||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||| ||||| ||| | | ||||    
T  18685831 gatttttgagggacaaaatgttattttaatattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagagacaaaaatatgagtttt 18685930  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| ||||  ||||||   ||||||| |||   ||||||||| ||||||||||||||||| | ||||||    
T  18685931 tgtcttgtcctttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaaacactggacaact 18685998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 42706354 - 42706521
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  42706354 gatttttgagggacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttt 42706453  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| | || |||||||   ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  42706454 tgtcttatcccttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 42706521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 476
Target Start/End: Original strand, 7258912 - 7259050
Alignment:
Q  336 ttattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgcctttt 435  Q
    ||||||| ||||||||||||| | |||  ||  ||  ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||| |||||||       
T  7258912 ttattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctcca 7259011  T
Q  436 gtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    ||||||| ||  | ||||||||| |||||||||||||||||    
T  7259012 gtttgtcctg--tacctgaaacagttttacaaatcaaacac 7259050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 476
Target Start/End: Original strand, 33366605 - 33366763
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||  ||||||| ||||||||||||| | |||  ||| |   ||||||||| |||||||| |||||| |||| ||| | | ||||    
T  33366605 gatttttgagggacaaaatgttattttggtattttagacaacttgtatgtgggagaaaaagttgtgttgtggtttggtgaggaacaaaaatatgagtttt 33366704  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    |||| |||| |||||||   ||||||| |||   ||||||||| |||||||||||||||||    
T  33366705 tgtcctgtcccttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaaacac 33366763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 339 - 485
Target Start/End: Original strand, 17540733 - 17540877
Alignment:
Q  339 ttttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtt 438  Q
    |||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||| |||||||   |||    
T  17540733 ttttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtt 17540832  T
Q  439 tgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| ||  | | ||||||| ||||||||||||||||| | ||||||    
T  17540833 tgtcctg--tacttgaaacagttttacaaatcaaacactggacaact 17540877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 485
Target Start/End: Complemental strand, 30798527 - 30798416
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttca-atttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatca 471  Q
    |||||||||||||||||| ||||||||||| ||| | |  ||||| || |||| |||||||   ||||||||||  | ||||||||| ||||||||||||    
T  30798527 aaagttgtgatgtggtttggtgagggacaaaaatatgagttttttttcctgtcccttgcctccagtttgtcatg--tacctgaaacagttttacaaatca 30798430  T
Q  472 aacaccgtacaact 485  Q
    ||||| | ||||||    
T  30798429 aacactggacaact 30798416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 34338805 - 34338972
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | ||   ||| ||  ||||||||| |||||||| ||||||| ||| ||| | | ||||    
T  34338805 gatttttgagggacaaaatgctattttggtattttagacaacttgtgcgtgggacaaaaagttgtgctgtggtttggtgagggtcaaaaatatgagtttt 34338904  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   ||||||| |||   ||||||||| ||||||||||||||||| | ||||||    
T  34338905 tgtcctgtcccttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaaacactggacaact 34338972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 493
Target Start/End: Complemental strand, 40832564 - 40832389
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| ||| ||| | |||||| ||||||||||| | | |||  ||  ||  ||||||||| |||||||| ||||||||||| ||| ||  ||||    
T  40832564 gatttttgggggacgaaatactattttggtattttagactacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatccgtttt 40832465  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||| |||| |||||||   ||||||| ||  | ||||||| |  |||||||||||||||| | |||||| |||||||    
T  40832464 tgtcctgtcccttgcctccagtttgtcttg--tacctgaaatagctttacaaatcaaacactggacaacttaagttgt 40832389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 449 - 498
Target Start/End: Complemental strand, 17237322 - 17237273
Alignment:
Q  449 ccctgaaacaattttacaaatcaaacaccgtacaactgaagttgtcatgc 498  Q
    ||||||||||||||||||||||||| |  |||||| ||||||||||||||    
T  17237322 ccctgaaacaattttacaaatcaaaaattgtacaattgaagttgtcatgc 17237273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 27462840 - 27462722
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| |||  ||  ||||||| |||| |||| ||   |||||||||||   ||| ||||| |||||||||||||    
T  27462840 aaagttgtgttgtggtttggtgagggacaaaaataacagcttttgtcttgtcccttgtctacagtttgtcatgta--cctaaaacagttttacaaatcaa 27462743  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | ||||||||| ||||    
T  27462742 acactggacaactgaaattgt 27462722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 28824595 - 28824477
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    |||||||||||||||||| ||||||||||| ||| | | |||||||| || | |||| ||   || |||  |||   ||||||||| |||||||||||||    
T  28824595 aaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgacccttgactccagtatgtgctgta--cctgaaacagttttacaaatcaa 28824498  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | ||||||||||||||    
T  28824497 acactggacaactgaagttgt 28824477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 313 - 430
Target Start/End: Original strand, 41934573 - 41934690
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||||  |||||||  ||||||| ||||||||||||| |  ||  | | ||  ||||||||| ||||||||||||| | |||| ||||||| |    
T  41934573 tatgatttttggtggacaaaatgttattttggtattttagacaacttatacgtaggacaaaaagttgtgttgtggtttagtgaagtacaagaatttcagt 41934672  T
Q  413 ttttgtcgtgtctcttgc 430  Q
    ||||||| ||||| ||||    
T  41934673 ttttgtcttgtcttttgc 41934690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 491
Target Start/End: Complemental strand, 38993195 - 38992993
Alignment:
Q  285 atggtattgaattattttttgacaattgtatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatg 384  Q
    |||||||||||| ||||| ||   ||| ||| ||||||||||||| |||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| ||    
T  38993195 atggtattgaataattttctgt--attatattatttttgggtgacgaaatgctatttttgtattttagacaacttgtacgtgggacaaaaagttgtgttg 38993098  T
Q  385 tggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaac 484  Q
    ||||||   |||| |||| ||||  | |||||||| |||| |||||||   ||||||| |  || ||||||||  ||||||||||||||||| | |||||    
T  38993097 tggtttgacgaggaacaaaaattgtagtttttgtcctgtcccttgcctccagtttgtcct--cttcctgaaactgttttacaaatcaaacactggacaac 38993000  T
Q  485 tgaagtt 491  Q
    || ||||    
T  38992999 tggagtt 38992993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 424
Target Start/End: Original strand, 13829490 - 13829541
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtc 424  Q
    |||||||||||||||| |||||| |||||| ||||||| |||||||| ||||    
T  13829490 aaagttgtgatgtggtctagtgatggacaaaaatttcagtttttgtcctgtc 13829541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 493
Target Start/End: Complemental strand, 26981781 - 26981629
Alignment:
Q  339 ttttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtt 438  Q
    |||| ||||||||||||| | |||  | ||||  |||||| || |||||||| ||||||||||| ||| | | |||||||| ||||  ||||||   |||    
T  26981781 ttttggtattttagacaacttgtacgtagaacaaaaagttttgttgtggtttggtgagggacaaaaatatgagtttttgtcatgtcatttgcctcccgtt 26981682  T
Q  439 tgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||| ||| ||  || |||| ||||||||||||||||| | ||||||| ||||||    
T  26981681 tgtcttgtatc--tggaacagttttacaaatcaaacactggacaactggagttgt 26981629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 402
Target Start/End: Original strand, 9717219 - 9717305
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaa 402  Q
    |||||||| | ||||||| | |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| |||||||||||    
T  9717219 gatttttgagggacaaaatactattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaa 9717305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 402
Target Start/End: Complemental strand, 37003963 - 37003877
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaa 402  Q
    |||||||| | |||||||  ||||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| |||||||||||    
T  37003963 gatttttgagggacaaaatgttattttggtattttagacaatttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaa 37003877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 454 - 494
Target Start/End: Original strand, 83401 - 83441
Alignment:
Q  454 aaacaattttacaaatcaaacaccgtacaactgaagttgtc 494  Q
    ||||| ||||||||||||||||| || ||||||||||||||    
T  83401 aaacagttttacaaatcaaacactgtgcaactgaagttgtc 83441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 425
Target Start/End: Original strand, 37088325 - 37088377
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtct 425  Q
    |||| |||| ||||| |||||||||||||| ||||||| |||||||| |||||    
T  37088325 aaagatgtgttgtggcttagtgagggacaagaatttcagtttttgtcttgtct 37088377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 476
Target Start/End: Original strand, 42365629 - 42365730
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| ||||||||  ||| |||||| ||| | | |||||||| |||| |||||||   ||||||||||  | ||||||||  |||||||||||||    
T  42365629 aaagttgtgttgtggtttgatgaaggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcatg--tacctgaaacggttttacaaatcaa 42365726  T
Q  473 acac 476  Q
    ||||    
T  42365727 acac 42365730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 5e-20; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 316 - 493
Target Start/End: Original strand, 10485152 - 10485327
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||   ||||||  |||||||||||| | |||  ||| ||  ||||||||| ||||||||  |||||||||| ||| ||| ||||    
T  10485152 gatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgctgagggacaaaaatatcagtttt 10485251  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||| ||||||||||||   ||||||| ||  | ||||||| ||||||||||||||||||| | ||||||| ||||||    
T  10485252 tgtcctgtctcttgcctccagtttgtcctg--tacctgaaataattttacaaatcaaacactggacaactggagttgt 10485327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 316 - 493
Target Start/End: Original strand, 10959995 - 10960170
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| ||||||||  |||||||||| ||| | | ||||    
T  10959995 gatttttgggggacaaaatgctatttttgtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgttgagggacaaaaatatgagtttt 10960094  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||| |||| ||||||||  ||||||| |||   ||||||||| ||||||||||||||||| | ||||||| ||||||    
T  10960095 tgtcctgtcccttgccttcagtttgtcctgta--cctgaaacagttttacaaatcaaacactggacaactggagttgt 10960170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 497
Target Start/End: Complemental strand, 14925569 - 14925411
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||| ||| ||  ||||||||  |||||||| ||||||||||| ||| | | |||||||| |||| ||| | | | |    
T  14925569 tattttggtattttagacaacttgtaagtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttacatctag 14925470  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgtcatg 497  Q
    |||||| |||   ||||||||| ||||||||||||||||| | ||||||||||||||||||    
T  14925469 tttgtcctgta--cctgaaacagttttacaaatcaaacactggacaactgaagttgtcatg 14925411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 18597235 - 18597117
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| |||||||  ||||||| |||| |||||||   ||||||||  | ||||||||||| |||||||||||||    
T  18597235 aaagttgtgttgtggtttggtgagggacaaaaatttcagattttgtcatgtcccttgcctccggtttgtca--tatccctgaaacagttttacaaatcaa 18597138  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | ||||||||| ||||    
T  18597137 acactgaacaactgaaattgt 18597117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 24242659 - 24242826
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  |||||||||||||||||| ||||||||||| ||| | | ||||    
T  24242659 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttt 24242758  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    ||| ||||| |||||||   ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  24242759 tgttgtgtcccttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 24242826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 327 - 491
Target Start/End: Original strand, 9613980 - 9614142
Alignment:
Q  327 gacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctc 426  Q
    |||| ||||||||||||||||||||||||| |  ||  ||||||  ||| ||||| || |||||||||||  |||| || ||||| ||||||| |||| |    
T  9613980 gacagaagattattttagtattttagacaacttatacgtggaacaaaaaattgtgttgcggtttagtgagtaacaaaaacttcaaattttgtcatgtccc 9614079  T
Q  427 ttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagtt 491  Q
    ||||||   |||| || ||  ||| ||||||| ||||||||||||||||  ||||||||||||||    
T  9614080 ttgcctccagtttatcctg--tccttgaaacagttttacaaatcaaacattgtacaactgaagtt 9614142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 313 - 493
Target Start/End: Complemental strand, 9902795 - 9902617
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||||||| ||| |||  ||||||| ||||||||||||| | |||  ||| ||  ||||||||| ||||||||| |||||||||| ||| ||| |    
T  9902795 tatgatttttgggggacgaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttaatgagggacaaaaatatcagt 9902696  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    ||||||| |||| ||| ||| | |||||||   | | ||||||||| ||  |||||| |||||| | ||||||||||||||    
T  9902695 ttttgtcctgtcccttacctctagtttgtc--ctatacctgaaacagttcaacaaattaaacactgaacaactgaagttgt 9902617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 316 - 476
Target Start/End: Complemental strand, 32409986 - 32409828
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | ||||||| | |||||| ||||||||||||| | || | ||| ||  |||||||||||||||||| ||||||||||| ||| | | ||||    
T  32409986 gatttttgagggacaaaatactattttggtattttagacaacttgtgagtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttt 32409887  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    |||| |||| |||| ||   ||||||| ||  | ||||||||| |||||||||||||||||    
T  32409886 tgtcctgtcccttgtctccagtttgtcctg--tacctgaaacagttttacaaatcaaacac 32409828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 327 - 485
Target Start/End: Original strand, 24203368 - 24203524
Alignment:
Q  327 gacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctc 426  Q
    |||||||  ||||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |||||||| ||||||    
T  24203368 gacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtctc 24203467  T
Q  427 ttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    ||||||   ||||||| ||  | ||| ||||| ||||||||||||||||| | ||||||    
T  24203468 ttgcctccagtttgtcctg--tacctaaaacagttttacaaatcaaacactggacaact 24203524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 3259678 - 3259845
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| |   ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  3259678 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttt 3259777  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| ||||||||||||   ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  3259778 tgtcctgtctcttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 3259845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 3932941 - 3932774
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||  ||||||| ||||||||||||| | |||  ||| ||  |||||||||||||||||| ||||| ||||| ||| | | ||||    
T  3932941 gatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagagacaaaaatatgagtttt 3932842  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| || | |||||||   ||||||| |||   ||||||||| ||||||||||||||||| | ||||||    
T  3932841 tgtcctgccccttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaaacactgaacaact 3932774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 10324245 - 10324078
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    ||||||| || |||||||  ||||||| ||||||||||||| | |||  ||  ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  10324245 gattttttggggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttt 10324146  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| ||||||| | ||||||| ||  | ||||||||| |||||||||| |||||| | ||||||    
T  10324145 tgtcctgtcccttgcctctagtttgtcctg--tacctgaaacagttttacaaattaaacactgaacaact 10324078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 476
Target Start/End: Complemental strand, 15277414 - 15277256
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||  |||||||   |||||| ||||||||||||| | |||  ||| |   |||||||||||||||||| ||||||||||| ||| | | ||||    
T  15277414 gatttttggaagacaaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttt 15277315  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    |||| |||| |||||||   ||||||| ||  | ||| |||||||||||||||||||||||    
T  15277314 tgtcctgtcccttgcctccagtttgtcctg--taccttaaacaattttacaaatcaaacac 15277256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 337 - 476
Target Start/End: Complemental strand, 167036 - 166899
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |||||||  |||| ||||||| | |    
T  167036 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgttatgtcccttgcctctag 166937  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    |||||| ||  | ||||||||| |||||||||||||||||    
T  166936 tttgtcctg--tacctgaaacagttttacaaatcaaacac 166899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 316 - 475
Target Start/End: Original strand, 2614891 - 2615048
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  2614891 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 2614990  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaaca 475  Q
    |||| |||| |||||||    |||||| ||  | ||||||||||||||||||||||||||    
T  2614991 tgtcctgtcccttgcctccaatttgtcctg--tacctgaaacaattttacaaatcaaaca 2615048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 15277014 - 15276914
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    |||||||||||||||||| ||||||||||| ||| | | |||||||| |||| |||||||   ||||||| ||  | ||||||||| |||||||||||||    
T  15277014 aaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaa 15276917  T
Q  473 aca 475  Q
    |||    
T  15276916 aca 15276914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 3379762 - 3379880
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| | |||||| ||||| ||||| ||| ||| |||||||| ||||||||||||   ||||||| ||| |  |||||||| ||||| |||||||    
T  3379762 aaagttgtgctatggtttggtgagcgacaaaaatatcagtttttgtcttgtctcttgcctccagtttgtcctgtat--ctgaaacagttttataaatcaa 3379859  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | |||||| |||||||    
T  3379860 acactggacaactaaagttgt 3379880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 31870177 - 31870056
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatg-tctccctgaaacaattttacaaatca 471  Q
    ||||||||| |||||||| ||||||||||| ||| ||| |||||||  |||| ||||||| | ||||||  || | | ||||| ||| ||||||||||||    
T  31870177 aaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgttttgtcccttgcctctagtttgttctgttgttcctgagacagttttacaaatca 31870078  T
Q  472 aacaccgtacaactgaagttgt 493  Q
    ||||| | ||||||| ||||||    
T  31870077 aacactggacaactggagttgt 31870056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 493
Target Start/End: Original strand, 32860007 - 32860221
Alignment:
Q  275 acaaactttcatggtattgaattattttttgacaattgtatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaa 374  Q
    ||||| ||| |||||||||||| ||||| ||   ||| | ||||||||||||||| |||  ||||||| |||||||||| || | |||  ||  ||  ||    
T  32860007 acaaatttttatggtattgaataattttctgt--attatttgatttttgggtgacgaaatgttatttttgtattttagaaaacttgtacgtgagacaaaa 32860104  T
Q  375 agttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaac 474  Q
     |||||| |||||||| | || |||||| |||| ||  ||||||| |||| |||||||   ||||||||||||  ||||||||  |||||||||||||||    
T  32860105 ggttgtgctgtggtttggcgatggacaaaaattgcagcttttgtcatgtcccttgcctccagtttgtcatgtc--cctgaaactgttttacaaatcaaac 32860202  T
Q  475 accgtacaactgaagttgt 493  Q
    || | |||| || ||||||    
T  32860203 actggacaattggagttgt 32860221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 454 - 497
Target Start/End: Complemental strand, 14925215 - 14925172
Alignment:
Q  454 aaacaattttacaaatcaaacaccgtacaactgaagttgtcatg 497  Q
    ||||||||||||||||||||||| | ||||||||||||||||||    
T  14925215 aaacaattttacaaatcaaacactggacaactgaagttgtcatg 14925172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 497
Target Start/End: Complemental strand, 9200465 - 9200342
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctctt-gccttttgtttgtcatgtctccctgaaacaattttacaaatca 471  Q
    |||||||| || |||||| |||||||| || |||||   |||||||| |||||||| |||| | |||||||||||||   | ||||| ||||||||||||    
T  9200465 aaagttgttatatggtttggtgagggagaagaatttttgtttttgtcttgtctcttagcctctagtttgtcatgtctt--taaaacagttttacaaatca 9200368  T
Q  472 aacaccgtacaactgaagttgtcatg 497  Q
    ||||  ||||||||  ||||||||||    
T  9200367 aacattgtacaacttgagttgtcatg 9200342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 494
Target Start/End: Original strand, 18057535 - 18057690
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||| ||  ||||||||  |||||||| ||||||||||| ||| | | |||||||| |||| ||| | | | |    
T  18057535 tattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttacatctag 18057634  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgtc 494  Q
    |||||||||| |  || ||||| ||||||||||||||||  | |||| ||||||||||    
T  18057635 tttgtcatgtat--ctcaaacagttttacaaatcaaacattggacaattgaagttgtc 18057690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 32132514 - 32132347
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||   ||||||  |||||||||||| | |||  ||| ||  ||||||||| ||||| || ||||||||||| ||| | | ||||    
T  32132514 gatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggattggtgagggacaaaaatatgagtttt 32132415  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   ||||||| ||  | ||| ||||| ||||||||||||||||| | ||||||    
T  32132414 tgtcctgtcccttgcctccagtttgtcctg--tacctaaaacagttttacaaatcaaacactggacaact 32132347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 316 - 476
Target Start/End: Original strand, 17867830 - 17867988
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| ||||||||  |||||||||| ||| | | ||||    
T  17867830 gatttttgagggacaaaatgctattttggtattttagacaatttgtacgtgggacaaaaagttgtgctgtggtttgatgagggacaaaaatatgagtttt 17867929  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    | || |||| |||||||   ||||||| |||   ||||||||| |||||||||||||||||    
T  17867930 tatcttgtcccttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaaacac 17867988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 316 - 476
Target Start/End: Original strand, 17877613 - 17877771
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| ||||||||  |||||||||| ||| | | ||||    
T  17877613 gatttttgagggacaaaatgctattttggtattttagacaatttgtacgtgggacaaaaagttgtgctgtggtttgatgagggacaaaaatatgagtttt 17877712  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    | || |||| |||||||   ||||||| |||   ||||||||| |||||||||||||||||    
T  17877713 tatcttgtcccttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaaacac 17877771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 475
Target Start/End: Original strand, 34176825 - 34176982
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||| | | |||  ||| ||  ||||||||| |||| ||| ||||| ||||| ||| | | ||||    
T  34176825 gatttttgagggacaaaatgctattttggtattttagactacttgtacgtgggacaaaaagttgtgctgtgatttggtgagagacaaaaatatgagtttt 34176924  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaaca 475  Q
    |||| |||| |||||||   ||||||||||  | ||||||||| ||||||||||||||||    
T  34176925 tgtcatgtcacttgcctccagtttgtcatg--tacctgaaacagttttacaaatcaaaca 34176982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 493
Target Start/End: Original strand, 23636354 - 23636393
Alignment:
Q  454 aaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  23636354 aaacaattttacaaatcaaacactgaacaactgaagttgt 23636393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 432
Target Start/End: Original strand, 24785111 - 24785166
Alignment:
Q  377 ttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgcct 432  Q
    ||||| |||||||||||||| ||||| ||||||| |||||||| |||| |||||||    
T  24785111 ttgtgttgtggtttagtgagcgacaagaatttcagtttttgtcatgtcccttgcct 24785166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 102
Target Start/End: Original strand, 27127986 - 27128021
Alignment:
Q  67 aattaagtacacaaatcattattagaatatgtctaa 102  Q
    |||||||||||||||||||||||||||||| |||||    
T  27127986 aattaagtacacaaatcattattagaatatttctaa 27128021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 486
Target Start/End: Complemental strand, 11675451 - 11675340
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| | |||||| ||||| ||||| ||| ||| |||||||| ||||  ||||||   ||||||| |||   ||||||||| |||||||||||||    
T  11675451 aaagttgtgttatggtttggtgagagacaaaaatatcagtttttgtcctgtcctttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaa 11675354  T
Q  473 acaccgtacaactg 486  Q
    |||| | |||||||    
T  11675353 acactgaacaactg 11675340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 337 - 494
Target Start/End: Original strand, 17443278 - 17443433
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||| ||  ||||||||  |||||||| |||||||| || ||| | | |||||||| |||| ||||| | | |    
T  17443278 tattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggataaaaatatgagtttttgtcctgtcccttgcatctag 17443377  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgtc 494  Q
    |||||| |||   |||||||   ||||||||||||||||| | |||||| ||||||||    
T  17443378 tttgtcctgta--cctgaaatggttttacaaatcaaacactggacaactaaagttgtc 17443433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 446
Target Start/End: Complemental strand, 34684086 - 34683989
Alignment:
Q  347 ttttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgt 446  Q
    |||||||||| | |||  ||||||  ||||||||| |||||||| ||||||||||| ||  | | ||||||||||||| |||||||   |||||||||||    
T  34684086 ttttagacaacttgtacgtggaacaaaaagttgtgttgtggtttggtgagggacaaaaa--tgagtttttgtcgtgtcccttgcctccagtttgtcatgt 34683989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 460 - 496
Target Start/End: Complemental strand, 35004120 - 35004084
Alignment:
Q  460 ttttacaaatcaaacaccgtacaactgaagttgtcat 496  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  35004120 ttttacaaatcaaacaccgcacaactggagttgtcat 35004084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 5e-20; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 336 - 493
Target Start/End: Complemental strand, 8561063 - 8560908
Alignment:
Q  336 ttattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgcctttt 435  Q
    ||||||| ||||||||||||| | |||  ||||||  |||||||||||||||||| |||||| |||| ||| ||| |||||||| ||||  |||| ||      
T  8561063 ttattttggtattttagacaacttgtacctggaacaaaaagttgtgatgtggtttggtgaggaacaaaaatatcagtttttgtcttgtcctttgctttca 8560964  T
Q  436 gtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    ||||||| ||| |  |||||||| ||||||||||||||||| | | ||||||||||||    
T  8560963 gtttgtcctgtat--ctgaaacagttttacaaatcaaacactgaataactgaagttgt 8560908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 494
Target Start/End: Original strand, 39918502 - 39918678
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||  ||||||| ||||||||||||| | |||  ||  ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  39918502 gatttttgggggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 39918601  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgtc 494  Q
    |||| |||| |||||||   ||||||| ||| |  |||||||| ||||||||||||||||| | ||||||  |||||||    
T  39918602 tgtcctgtcccttgcctccagtttgtcttgtat--ctgaaacagttttacaaatcaaacactggacaactagagttgtc 39918678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 7523167 - 7523334
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  |||||||||||||||||| ||||||||||| ||| | | ||||    
T  7523167 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttt 7523266  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  7523267 tgtcctgtcccttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 7523334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 18470472 - 18470354
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| || |||||||| ||||||| |||||||| |||| ||||||||  ||||||  ||||  ||||||||| |||||||||||||    
T  18470472 aaagttgtgctgtggtttggtaagggacaaaaatttcagtttttgtcttgtcccttgccttcagtttgttctgtc--cctgaaacagttttacaaatcaa 18470375  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | | ||||| ||||||    
T  18470374 acactggataactggagttgt 18470354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 316 - 473
Target Start/End: Original strand, 39788187 - 39788343
Alignment:
Q  316 gatttttgggtgacaaaaga-ttattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaattt 414  Q
    |||||||||| |||||||   ||||||||||||||||||||| | |||  ||| ||  |||||||||||||||||| ||||||||||| ||| | | |||    
T  39788187 gatttttgggggacaaaaatgttattttagtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttt 39788286  T
Q  415 ttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaa 473  Q
    ||||| ||||  ||||||   ||||||| ||  | ||||||||| ||||||||||||||    
T  39788287 ttgtcctgtcctttgcctacagtttgtcctg--tacctgaaacagttttacaaatcaaa 39788343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 41790563 - 41790397
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| |||||||  ||||||||||||||||||||| | |||  ||  ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  41790563 gatttttgggggacaaaatgttattttagtattttagacaatttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttt 41790464  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| ||| | ||||||   ||||||| |||    |||||||| ||||||||||||||||| | ||||||    
T  41790463 tgtcctgtttattgcctccagtttgtcctgt---actgaaacagttttacaaatcaaacactggacaact 41790397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 493
Target Start/End: Original strand, 3735352 - 3735527
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||  |||||||  ||||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| |||| |||||| ||| ||| ||||    
T  3735352 gatttttggaggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgatggacaaaaatatcagtttt 3735451  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||| ||||  ||||||    ||||||||||   ||||||||  ||||||||||||||||| | ||||||| ||||||    
T  3735452 tgtcctgtccattgcctccattttgtcatgta--cctgaaacggttttacaaatcaaacactggacaactggagttgt 3735527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 336 - 493
Target Start/End: Complemental strand, 4689779 - 4689624
Alignment:
Q  336 ttattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgcctttt 435  Q
    ||||||| ||||||||| ||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| |   |||||||| |||| |||||||       
T  4689779 ttatttttgtattttaggcaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgtgtttttgtcctgtcccttgcctcca 4689680  T
Q  436 gtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    ||||||| |||   ||||||||| ||||||||||||||||| | ||||||||||||||    
T  4689679 gtttgtcttgta--cctgaaacagttttacaaatcaaacactggacaactgaagttgt 4689624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 494
Target Start/End: Original strand, 2351669 - 2351851
Alignment:
Q  310 ttgtatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttc 409  Q
    ||||| |||||||| | |||||||  ||||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| |     
T  2351669 ttgtacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatg 2351768  T
Q  410 aatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgtc 494  Q
    | |||||||| |||| |||||||   |||||||   | | ||| ||||| ||||||||||||||||| | ||||||  |||||||    
T  2351769 agtttttgtcctgtcacttgcctccagtttgtc--ctataccttaaacagttttacaaatcaaacactgaacaactagagttgtc 2351851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 485
Target Start/End: Complemental strand, 21739241 - 21739095
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||| |||||||   |    
T  21739241 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccag 21739142  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  21739141 tttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 21739095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 473
Target Start/End: Original strand, 34794939 - 34795037
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    |||||||||||||||||| ||||||||||| ||| | | |||||||| |||| ||||||| | ||||||| ||  | ||||||||| |||||||||||||    
T  34794939 aaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctg--tacctgaaacagttttacaaatcaa 34795036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 494
Target Start/End: Original strand, 32528710 - 32528886
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  32528710 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttt 32528809  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgtc 494  Q
    |||| |||| |||| ||   ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||  |||||||    
T  32528810 tgtcctgtcccttgtctccagtttgtcctg--tacctgaaacagttttacaaatcaaacactgaacaactagagttgtc 32528886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 336 - 485
Target Start/End: Original strand, 8136852 - 8136999
Alignment:
Q  336 ttattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgcctttt 435  Q
    ||||||| ||||||||||||| | |||  | | ||  ||||||||| |||||||| ||||||||||| ||| | | |||||||| ||||||||||||       
T  8136852 ttattttggtattttagacaacttgtacgtaggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctcca 8136951  T
Q  436 gtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    ||||||| ||| |  |||||||| ||||||||| ||||||| | ||||||    
T  8136952 gtttgtcctgtat--ctgaaacagttttacaaaacaaacactggacaact 8136999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 11963336 - 11963503
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | | |  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  11963336 gatttttgagggacaaaatgctattttggtattttagacaacttgcacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 11963435  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  11963436 tgtcatgtcccttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 11963503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 485
Target Start/End: Original strand, 35701272 - 35701439
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||||||  |||||| || |||||||| ||||||||||| ||| | | ||||    
T  35701272 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtggaacaaaaagttatgttgtggtttggtgagggacaaaaatatgagtttt 35701371  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||   ||||||| ||  | || |||||| ||||||||||||||||| | ||||||    
T  35701372 tgtcctgtcccttgcctccagtttgtcctg--taccagaaacagttttacaaatcaaacactggacaact 35701439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 476
Target Start/End: Complemental strand, 28090621 - 28090463
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||  ||||||| ||||||||||||| | |||  ||| ||  ||||||||| ||| |||| ||||||||||| ||| | | ||||    
T  28090621 gatttttgagggacaaaatgttatttttgtattttagacaacttgtacgtgggacaaaaagttgtgttgtagtttggtgagggacaaaaatatgagtttt 28090522  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    |||| |||| |||||||   ||||| | ||  | ||||||||| |||||||||||||||||    
T  28090521 tgtcatgtcccttgcctccagtttgccttg--tacctgaaacagttttacaaatcaaacac 28090463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 485
Target Start/End: Original strand, 31644438 - 31644607
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    |||||||||| || |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |    
T  31644438 tatgatttttaggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagt 31644537  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
     |||||| || |||||||||   ||||||| ||  | ||||||||| ||||||||||||||||| | ||||||    
T  31644538 atttgtcttg-ctcttgcctccagtttgtcctg--tacctgaaacagttttacaaatcaaacactggacaact 31644607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 472
Target Start/End: Complemental strand, 700705 - 700548
Alignment:
Q  313 tatgatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaat 412  Q
    ||||||||| ||| ||||||| | |||||| |||||||||| || | |||  ||  ||  ||||||||| |||||||| |||||| |||| ||| | |||    
T  700705 tatgattttcgggggacaaaataatattttggtattttagataacttgtacgtgagacaaaaagttgtgttgtggtttggtgaggaacaaaaatatgaat 700606  T
Q  413 ttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||  |||| |||| || ||||||||| |||   ||||||||| |||||||||||||    
T  700605 ttttgttttgtcccttgtctcttgtttgtcttgta--cctgaaacagttttacaaatcaa 700548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 474
Target Start/End: Original strand, 35955065 - 35955150
Alignment:
Q  387 gtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaac 474  Q
    |||||||| || |||| ||||||| |||||||| |||||| |||||   |||||||||||||   |||||||||||||||||||||||    
T  35955065 gtttagtgcggaacaagaatttcagtttttgtcttgtctcatgcctccagtttgtcatgtct--ttgaaacaattttacaaatcaaac 35955150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 476
Target Start/End: Original strand, 40489333 - 40489490
Alignment:
Q  317 atttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaattttt 416  Q
    ||||||| | |||||||  ||||||| ||||||||||||| | |||  ||| ||  ||||||||| |||| ||| ||||||||||| ||| | | |||||    
T  40489333 atttttgagggacaaaatgttattttggtattttagacaacttgtatgtgggacaaaaagttgtgctgtgatttggtgagggacaaaaatatgagttttt 40489432  T
Q  417 gtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    |||  ||| |||||||   ||||||| |  || ||||||||| |||||||||||||||||    
T  40489433 gtcccgtcccttgcctccagtttgtctt--ctacctgaaacagttttacaaatcaaacac 40489490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 476
Target Start/End: Original strand, 553394 - 553550
Alignment:
Q  318 tttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttg 417  Q
    |||| ||| |||||||  ||||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||| ||||| ||| | | ||||||    
T  553394 ttttggggggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagagacaaaaatatgagtttttg 553493  T
Q  418 tcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    || ||||||||||||   ||||||| ||  | | ||||||| ||||| |||||||||||    
T  553494 tcttgtctcttgcctccagtttgtcctg--tacttgaaacagttttataaatcaaacac 553550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 494
Target Start/End: Complemental strand, 14011297 - 14011178
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttg-ccttttgtttgtcatgtctccctgaaacaattttacaaatca 471  Q
    ||||||||||||| |||||||||| ||||| |||||   |||||||  ||||||||| || |  ||||||||||  ||||| ||||||||| || |||||    
T  14011297 aaagttgtgatgtagtttagtgagagacaaaaattttggtttttgtattgtctcttgcccctaagtttgtcatg--tccctaaaacaatttcac-aatca 14011201  T
Q  472 aacaccgtacaactgaagttgtc 494  Q
    ||||  |||||||||||||||||    
T  14011200 aacatagtacaactgaagttgtc 14011178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 375 - 485
Target Start/End: Complemental strand, 31880118 - 31880010
Alignment:
Q  375 agttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaac 474  Q
    |||||||||||||||| ||||||||||| ||| | | |||||||| |||| |||||||   ||||||| ||  | ||||||||| |||||| ||||||||    
T  31880118 agttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctg--tacctgaaacagttttactaatcaaac 31880021  T
Q  475 accgtacaact 485  Q
    || | ||||||    
T  31880020 actgaacaact 31880010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 474
Target Start/End: Complemental strand, 4818220 - 4818085
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||  |||||||   |    
T  4818220 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcttgttccttgcctccag 4818121  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaac 474  Q
    |||||| ||  | ||||||||| |||||||||||||||    
T  4818120 tttgtcttg--tacctgaaacagttttacaaatcaaac 4818085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 485
Target Start/End: Complemental strand, 7770360 - 7770213
Alignment:
Q  336 ttattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgcctttt 435  Q
    ||||||| ||||||||| ||| | |||  ||| ||  ||||||||| |||||||| |||| |||||| ||| |   |||||||| |||| |||||||       
T  7770360 ttatttttgtattttaggcaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaaaatatgtgtttttgtcctgtcccttgcctcca 7770261  T
Q  436 gtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    ||||||| |||   ||||||||||||||||||||||||||| | ||||||    
T  7770260 gtttgtcctgta--cctgaaacaattttacaaatcaaacactggacaact 7770213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 493
Target Start/End: Complemental strand, 27839174 - 27839000
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||  ||||||||  |||||| ||||||||||||| | |||  ||  ||  ||||||||  | |||||| ||||||||||| ||||| |  |||    
T  27839174 gatttttggaggacaaaaggctattttggtattttagacaacttgtacatgagacaaaaagttgttttatggtttggtgagggacaaaaattt-atgttt 27839076  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    | || ||||  |||||||  |||||||||||   ||||||||| ||||||||||||||||| | ||||||| ||||||    
T  27839075 tatcctgtccattgccttcagtttgtcatgta--cctgaaacagttttacaaatcaaacactggacaactggagttgt 27839000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 491
Target Start/End: Complemental strand, 36175050 - 36175012
Alignment:
Q  453 gaaacaattttacaaatcaaacaccgtacaactgaagtt 491  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  36175050 gaaacagttttacaaatcaaacaccgtacaactgaagtt 36175012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 32093025 - 32092908
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| |||||| |||| ||||||| |||||||| | ||  ||||||    |||||| |||   |||||||||||||||||||||||    
T  32093025 aaagttgtgctgtggtttggtgagg-acaaaaatttcagtttttgtcctatcctttgcctccaatttgtcctgtt--cctgaaacaattttacaaatcaa 32092929  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | ||||||| ||||||    
T  32092928 acactgcacaactggagttgt 32092908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 496
Target Start/End: Complemental strand, 11090912 - 11090791
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    |||||||||  |||| |||||||||| ||| ||||||| |||| |||   |||||  ||| | |||||||||||   ||  |||||||||||||||| ||    
T  11090912 aaagttgtgtcgtggcttagtgagggtcaagaatttcagttttcgtccaatctctgacctctagtttgtcatgtt--ccaaaaacaattttacaaattaa 11090815  T
Q  473 acaccgtacaactgaagttgtcat 496  Q
    ||||| ||||| ||||||||||||    
T  11090814 acaccttacaattgaagttgtcat 11090791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 432
Target Start/End: Complemental strand, 22432410 - 22432294
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| ||| |||   |||||| ||||||||||||| | ||| |||  ||  ||| ||||| ||||||||  |||||||||| ||| ||| ||||    
T  22432410 gatttttgggggacgaaatgctattttggtattttagacaacttgtacttgagacaaaaaattgtgttgtggtttgatgagggacaaaaatatcagtttt 22432311  T
Q  416 tgtcgtgtctcttgcct 432  Q
    |||| ||||||||||||    
T  22432310 tgtcctgtctcttgcct 22432294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 432
Target Start/End: Complemental strand, 5571688 - 5571629
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgcct 432  Q
    ||||||||| |||||||| ||||||||||| ||| | |||||||||| |||| |||||||    
T  5571688 aaagttgtgttgtggtttggtgagggacaaaaatatgaatttttgtcctgtcccttgcct 5571629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 493
Target Start/End: Complemental strand, 7725778 - 7725735
Alignment:
Q  450 cctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||||||||||||||| |||||||||| | ||||||||||||||    
T  7725778 cctgaaacaattttactaatcaaacactggacaactgaagttgt 7725735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 320 - 485
Target Start/End: Complemental strand, 24181721 - 24181558
Alignment:
Q  320 tttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtc 419  Q
    |||||| |||||||   |||||| ||||||||||||| |  ||  ||| ||  |||||| || |||||||| ||||||||||| ||| | | ||||||||    
T  24181721 tttgggggacaaaatgctattttggtattttagacaacttatacgtgggacaaaaagttatgctgtggtttggtgagggacaaaaatatgagtttttgtc 24181622  T
Q  420 gtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
     |||| |||| ||   ||||||| |||   ||||||||| ||||||||||||||||| | ||||||    
T  24181621 ctgtcccttggctccagtttgtcctgta--cctgaaacagttttacaaatcaaacactggacaact 24181558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 402
Target Start/End: Original strand, 40182459 - 40182545
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaa 402  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  |||||||||||||||||| |||||||||||    
T  40182459 gatttttgagagacaaaatgctattttggtattttagacaacttgtacatgggacaaaaagttgtgatgtggtttggtgagggacaa 40182545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 493
Target Start/End: Complemental strand, 13767 - 13613
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttg 436  Q
    |||||| || |||||||||| | |||| ||| ||  ||||||||  |||||||| ||||||||||| ||||||| |||||||| | || |||||||   |    
T  13767 tattttggtgttttagacaacttgtaagtgggacaaaaagttgtactgtggtttggtgagggacaaaaatttcagtttttgtcctatcccttgcctccag 13668  T
Q  437 tttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
    |||||  | | ||||||||||||||||||||||||||||| | ||||||| ||||||    
T  13667 tttgt--tctgtccctgaaacaattttacaaatcaaacactggacaactggagttgt 13613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 1687 - 1569
Alignment:
Q  373 aaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaa 472  Q
    ||||||||| |||||||| ||||||||||| ||||||| |||||||| |||| |||||||   |||||||   | ||| ||||||| |||||||||||||    
T  1687 aaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtcttgtcccttgcctccagtttgtc--ctatccttgaaacagttttacaaatcaa 1590  T
Q  473 acaccgtacaactgaagttgt 493  Q
    |||| | | ||||||||||||    
T  1589 acactggagaactgaagttgt 1569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 316 - 476
Target Start/End: Original strand, 15167 - 15325
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||||| ||||||| | |||||||||||||||||||| | |||  ||  ||  ||||||||| |||||||| ||| ||||||| ||| | | ||||    
T  15167 gatttttgggggacaaaatactattttagtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgggggacaaaaatatgagtttt 15266  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    |||| |||| |||||||   ||||||| |||   ||||||||| |||||||||||||||||    
T  15267 tgtcttgtcccttgcctccagtttgtcctgta--cctgaaacagttttacaaatcaaacac 15325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 18155 - 17988
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  18155 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttt 18056  T
Q  416 tgtcgtgtctcttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    |||| |||| |||||||    |||||||||  | ||||||||| ||||||||||||||||| | ||||||    
T  18055 tgtcctgtcccttgcctccaatttgtcatg--tacctgaaacagttttacaaatcaaacactggacaact 17988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 424
Target Start/End: Complemental strand, 12637 - 12529
Alignment:
Q  316 gatttttgggtgacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttt 415  Q
    |||||||| | |||||||   |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | ||||    
T  12637 gatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttt 12538  T
Q  416 tgtcgtgtc 424  Q
    |||| ||||    
T  12537 tgtcctgtc 12529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 493
Target Start/End: Complemental strand, 5521 - 5365
Alignment:
Q  336 ttattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaattttt-gtcgtgtctcttgccttt 434  Q
    ||||||| ||||||||| ||| | |||  ||| ||  |||||||||||||||||| ||||||||||| ||| |   ||||| ||| |||| |||||||      
T  5521 ttatttttgtattttaggcaacttgtatgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgtgttttttgtcctgtcccttgcctcc 5422  T
Q  435 tgtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaactgaagttgt 493  Q
     ||||||| |||   ||||||||| ||||||||||||||||| | ||||||||||||||    
T  5421 agtttgtcttgta--cctgaaacagttttacaaatcaaacactggacaactgaagttgt 5365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 476
Target Start/End: Complemental strand, 2428 - 2281
Alignment:
Q  327 gacaaaagattattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctc 426  Q
    ||||||| | |||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| ||||||||||| ||| | | |||||||| |||| |    
T  2428 gacaaaaaactattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtccc 2329  T
Q  427 ttgccttttgtttgtcatgtctccctgaaacaattttacaaatcaaacac 476  Q
    ||||||    |||||| ||  | ||||||||| |||||||||||||||||    
T  2328 ttgcctccaatttgtcctg--tacctgaaacagttttacaaatcaaacac 2281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 336 - 485
Target Start/End: Original strand, 23590 - 23737
Alignment:
Q  336 ttattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtctcttgcctttt 435  Q
    ||||||| ||||||||||||| | |||  ||| ||  ||||||||| |||||||| |||| |||||| ||| | | |||||||| |||| |||||||       
T  23590 ttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaaaatatgagtttttgtcatgtcccttgcctcaa 23689  T
Q  436 gtttgtcatgtctccctgaaacaattttacaaatcaaacaccgtacaact 485  Q
    ||||||| |||   ||||||||| ||||||||||||||||| | ||||||    
T  23690 gtttgtcctgta--cctgaaacagttttacaaatcaaacactggacaact 23737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 424
Target Start/End: Original strand, 101965 - 102052
Alignment:
Q  337 tattttagtattttagacaaatagtaattggaacggaaagttgtgatgtggtttagtgagggacaataatttcaatttttgtcgtgtc 424  Q
    |||||| ||||||||||||| | |||  ||| ||  |||||||||||||||||| ||||||||||| ||| | | |||||||| ||||    
T  101965 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcatgtc 102052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0831 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 377 - 419
Target Start/End: Complemental strand, 3223 - 3181
Alignment:
Q  377 ttgtgatgtggtttagtgagggacaataatttcaatttttgtc 419  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||    
T  3223 ttgtgatgtggttttgtgagagacaataatttcattttttgtc 3181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 353
Target Start/End: Complemental strand, 3791 - 3692
Alignment:
Q  252 aacacaaggaagaatagtgcgtgacaaactttcatggtattgaattattttttgacaattgtatgatttttgggtgacaaaagattattttagtatttta 351  Q
    ||||||||| |||||||| | ||||||||||| ||| |||||||| |||||||  |  || ||||||||||||  || |||| | |||||| ||||||||    
T  3791 aacacaaggtagaatagtacatgacaaacttttatgatattgaataattttttatc--ttatatgatttttggtggataaaaaactatttttgtatttta 3694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 454 - 486
Target Start/End: Complemental strand, 3587 - 3555
Alignment:
Q  454 aaacaattttacaaatcaaacaccgtacaactg 486  Q
    ||||||||||||||||||||||||||| |||||    
T  3587 aaacaattttacaaatcaaacaccgtataactg 3555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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