View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13584_high_1 (Length: 624)

Name: NF13584_high_1
Description: NF13584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13584_high_1
NF13584_high_1
[»] chr6 (25 HSPs)
chr6 (274-608)||(4611451-4611790)
chr6 (366-536)||(4515344-4515512)
chr6 (190-292)||(4611336-4611438)
chr6 (119-256)||(31265775-31265913)
chr6 (60-256)||(30063922-30064115)
chr6 (60-256)||(3604573-3604766)
chr6 (132-250)||(14306220-14306339)
chr6 (132-256)||(14312621-14312746)
chr6 (60-256)||(15081364-15081557)
chr6 (151-257)||(4238449-4238554)
chr6 (118-256)||(7301055-7301192)
chr6 (123-251)||(2657901-2658030)
chr6 (132-216)||(7167758-7167842)
chr6 (157-282)||(34915753-34915886)
chr6 (119-256)||(9755120-9755258)
chr6 (172-280)||(7739462-7739576)
chr6 (122-184)||(26356268-26356330)
chr6 (132-184)||(16126220-16126272)
chr6 (165-256)||(8569613-8569702)
chr6 (132-182)||(8569787-8569837)
chr6 (144-233)||(117100-117189)
chr6 (156-256)||(33109406-33109507)
chr6 (60-104)||(7359184-7359228)
chr6 (64-104)||(20383784-20383824)
chr6 (144-188)||(28539017-28539061)
[»] chr3 (51 HSPs)
chr3 (60-256)||(9017740-9017935)
chr3 (151-256)||(43639489-43639595)
chr3 (151-256)||(54122197-54122303)
chr3 (144-256)||(26134676-26134789)
chr3 (118-256)||(32023073-32023213)
chr3 (144-256)||(39866526-39866639)
chr3 (132-282)||(2868583-2868739)
chr3 (144-256)||(11251100-11251213)
chr3 (132-307)||(17776911-17777092)
chr3 (132-307)||(19078212-19078393)
chr3 (144-233)||(48744280-48744369)
chr3 (144-285)||(10855015-10855162)
chr3 (118-256)||(32827277-32827416)
chr3 (121-309)||(53876351-53876545)
chr3 (144-233)||(26832092-26832181)
chr3 (132-306)||(14756032-14756212)
chr3 (133-252)||(36097632-36097752)
chr3 (118-248)||(54493903-54494034)
chr3 (144-254)||(54845491-54845602)
chr3 (144-256)||(5245433-5245546)
chr3 (162-256)||(33994696-33994791)
chr3 (151-256)||(21296476-21296582)
chr3 (132-226)||(54458313-54458407)
chr3 (121-233)||(41031570-41031685)
chr3 (132-256)||(45392099-45392224)
chr3 (148-256)||(54782988-54783097)
chr3 (132-219)||(11529122-11529209)
chr3 (132-256)||(1772079-1772205)
chr3 (144-257)||(15280626-15280739)
chr3 (163-256)||(8706190-8706280)
chr3 (163-256)||(9058077-9058167)
chr3 (144-227)||(15082023-15082106)
chr3 (156-214)||(22202405-22202463)
chr3 (144-197)||(46786014-46786067)
chr3 (156-256)||(55415412-55415513)
chr3 (174-256)||(26142950-26143035)
chr3 (144-206)||(12744835-12744897)
chr3 (144-197)||(37041906-37041959)
chr3 (156-256)||(52325210-52325311)
chr3 (144-256)||(44234111-44234223)
chr3 (163-214)||(53583576-53583627)
chr3 (197-256)||(39365010-39365071)
chr3 (133-191)||(49003280-49003338)
chr3 (195-256)||(49006269-49006331)
chr3 (122-184)||(50150413-50150475)
chr3 (60-101)||(8706089-8706130)
chr3 (60-101)||(9057976-9058017)
chr3 (60-104)||(2868515-2868559)
chr3 (60-104)||(32023223-32023267)
chr3 (122-214)||(39329766-39329858)
chr3 (60-104)||(43640687-43640731)
[»] chr7 (46 HSPs)
chr7 (123-256)||(27234503-27234636)
chr7 (118-256)||(37490591-37490730)
chr7 (121-256)||(2842025-2842161)
chr7 (118-254)||(33584558-33584695)
chr7 (144-279)||(11616582-11616723)
chr7 (144-256)||(2846649-2846762)
chr7 (132-233)||(17266036-17266137)
chr7 (144-256)||(47454025-47454138)
chr7 (132-251)||(18235199-18235319)
chr7 (118-256)||(36117656-36117796)
chr7 (151-256)||(7425850-7425957)
chr7 (118-256)||(29257542-29257681)
chr7 (144-256)||(5724681-5724793)
chr7 (132-256)||(30463025-30463150)
chr7 (119-256)||(49100476-49100613)
chr7 (118-233)||(29434577-29434692)
chr7 (160-256)||(23058856-23058952)
chr7 (156-256)||(46095394-46095494)
chr7 (121-256)||(28923204-28923338)
chr7 (61-249)||(31581423-31581608)
chr7 (144-256)||(44604451-44604563)
chr7 (138-216)||(7456598-7456676)
chr7 (144-214)||(21387496-21387566)
chr7 (156-249)||(23703949-23704043)
chr7 (156-237)||(34001852-34001933)
chr7 (151-251)||(38181852-38181953)
chr7 (119-257)||(40038081-40038222)
chr7 (151-222)||(1643346-1643417)
chr7 (119-214)||(33774059-33774154)
chr7 (119-257)||(48981652-48981791)
chr7 (144-253)||(32776004-32776114)
chr7 (118-233)||(34963805-34963923)
chr7 (202-307)||(45890775-45890886)
chr7 (118-208)||(46288453-46288543)
chr7 (144-209)||(16870788-16870853)
chr7 (144-184)||(25778765-25778805)
chr7 (60-104)||(37157112-37157156)
chr7 (132-211)||(37157179-37157259)
chr7 (190-256)||(5083445-5083512)
chr7 (194-256)||(22618007-22618070)
chr7 (132-214)||(28333180-28333262)
chr7 (155-256)||(40803600-40803701)
chr7 (162-194)||(5083518-5083550)
chr7 (64-104)||(28923349-28923389)
chr7 (64-104)||(37491028-37491068)
chr7 (60-104)||(48981320-48981364)
[»] chr8 (47 HSPs)
chr8 (118-256)||(5962446-5962585)
chr8 (65-279)||(5391994-5392211)
chr8 (132-254)||(45425494-45425617)
chr8 (61-256)||(32241397-32241589)
chr8 (118-256)||(28802762-28802901)
chr8 (132-256)||(39171552-39171677)
chr8 (165-256)||(9014745-9014837)
chr8 (132-256)||(2349359-2349485)
chr8 (118-233)||(44615362-44615477)
chr8 (118-256)||(44790395-44790534)
chr8 (144-252)||(21587298-21587403)
chr8 (151-256)||(33190882-33190988)
chr8 (133-256)||(12653697-12653821)
chr8 (144-256)||(38252410-38252524)
chr8 (143-256)||(29730869-29730985)
chr8 (144-256)||(45197632-45197744)
chr8 (121-251)||(34133125-34133256)
chr8 (132-256)||(4274272-4274397)
chr8 (144-256)||(42412356-42412469)
chr8 (132-225)||(7042761-7042855)
chr8 (144-256)||(42558556-42558667)
chr8 (118-256)||(29615793-29615932)
chr8 (151-257)||(31132758-31132865)
chr8 (143-256)||(22324928-22325042)
chr8 (157-250)||(31410587-31410681)
chr8 (119-256)||(32967250-32967388)
chr8 (171-282)||(4480412-4480528)
chr8 (163-256)||(13084921-13085015)
chr8 (164-256)||(139063-139156)
chr8 (144-256)||(138674-138785)
chr8 (151-256)||(37219734-37219843)
chr8 (135-256)||(3384546-3384670)
chr8 (166-256)||(886652-886746)
chr8 (144-256)||(7258340-7258453)
chr8 (122-227)||(8618127-8618232)
chr8 (122-210)||(1230383-1230470)
chr8 (155-277)||(27973633-27973761)
chr8 (155-277)||(28030902-28031030)
chr8 (61-104)||(33826177-33826220)
chr8 (144-214)||(2195489-2195559)
chr8 (144-256)||(15559103-15559216)
chr8 (122-277)||(27868272-27868433)
chr8 (64-104)||(26570281-26570321)
chr8 (163-256)||(26677113-26677208)
chr8 (64-104)||(29730990-29731030)
chr8 (60-104)||(33191031-33191075)
chr8 (119-183)||(34287126-34287190)
[»] chr4 (66 HSPs)
chr4 (118-256)||(18849732-18849871)
chr4 (118-256)||(42024174-42024313)
chr4 (120-256)||(14009607-14009744)
chr4 (144-252)||(283454-283563)
chr4 (118-227)||(3686006-3686115)
chr4 (64-256)||(39979725-39979914)
chr4 (144-226)||(27977168-27977250)
chr4 (156-252)||(4360385-4360482)
chr4 (132-256)||(38160125-38160250)
chr4 (132-307)||(22872303-22872486)
chr4 (65-256)||(54729457-54729644)
chr4 (146-233)||(33047515-33047602)
chr4 (118-256)||(41710117-41710256)
chr4 (144-252)||(39976371-39976476)
chr4 (119-256)||(49306583-49306721)
chr4 (148-256)||(41203762-41203871)
chr4 (144-282)||(17237064-17237208)
chr4 (119-214)||(37309694-37309789)
chr4 (155-256)||(8295061-8295163)
chr4 (144-256)||(42185769-42185882)
chr4 (153-233)||(9093759-9093839)
chr4 (132-256)||(30568668-30568797)
chr4 (161-256)||(35909546-35909642)
chr4 (118-256)||(49812224-49812363)
chr4 (144-226)||(32559184-32559266)
chr4 (132-256)||(4357577-4357701)
chr4 (172-233)||(41436530-41436591)
chr4 (156-237)||(50328064-50328145)
chr4 (132-256)||(1825219-1825346)
chr4 (161-256)||(31862827-31862923)
chr4 (118-256)||(38976986-38977126)
chr4 (118-256)||(39258243-39258384)
chr4 (119-226)||(42544205-42544312)
chr4 (118-256)||(45290033-45290170)
chr4 (144-277)||(52676978-52677117)
chr4 (144-256)||(28974327-28974440)
chr4 (156-256)||(49448874-49448975)
chr4 (165-256)||(26185224-26185316)
chr4 (148-256)||(51572203-51572310)
chr4 (132-257)||(16493270-16493394)
chr4 (144-206)||(51527439-51527501)
chr4 (145-256)||(34021059-34021171)
chr4 (157-256)||(4727555-4727654)
chr4 (162-233)||(8065572-8065643)
chr4 (164-256)||(21240934-21241028)
chr4 (151-198)||(43421328-43421375)
chr4 (132-206)||(42132822-42132896)
chr4 (122-215)||(37786960-37787053)
chr4 (63-104)||(43335145-43335186)
chr4 (118-207)||(48740515-48740604)
chr4 (132-188)||(11583913-11583969)
chr4 (122-226)||(27790424-27790528)
chr4 (132-184)||(35027543-35027595)
chr4 (60-104)||(51572349-51572393)
chr4 (174-256)||(6506085-6506168)
chr4 (166-233)||(40881189-40881256)
chr4 (132-214)||(18509850-18509932)
chr4 (156-225)||(26799221-26799290)
chr4 (144-225)||(47846920-47847000)
chr4 (156-256)||(48400604-48400705)
chr4 (60-104)||(1825370-1825414)
chr4 (60-104)||(3685952-3685996)
chr4 (65-105)||(28974253-28974293)
chr4 (60-104)||(33047439-33047483)
chr4 (65-101)||(45289983-45290019)
chr4 (60-104)||(49812170-49812214)
[»] chr2 (53 HSPs)
chr2 (144-256)||(23684980-23685093)
chr2 (151-256)||(28572236-28572341)
chr2 (118-256)||(28925821-28925960)
chr2 (151-256)||(3100428-3100534)
chr2 (144-256)||(28301455-28301568)
chr2 (64-256)||(7649949-7650137)
chr2 (162-256)||(2882024-2882119)
chr2 (118-256)||(37247857-37247996)
chr2 (60-256)||(5211931-5212124)
chr2 (156-256)||(41436112-41436212)
chr2 (144-256)||(24775781-24775894)
chr2 (144-256)||(30757541-30757654)
chr2 (152-256)||(44534456-44534561)
chr2 (119-256)||(13375161-13375301)
chr2 (122-256)||(11726695-11726830)
chr2 (118-251)||(28108353-28108487)
chr2 (118-256)||(15859318-15859454)
chr2 (162-280)||(31545962-31546086)
chr2 (132-309)||(28526973-28527156)
chr2 (171-256)||(565137-565223)
chr2 (155-233)||(18181210-18181288)
chr2 (132-256)||(2756683-2756808)
chr2 (132-256)||(43077699-43077824)
chr2 (157-256)||(36396431-36396531)
chr2 (148-282)||(43950390-43950530)
chr2 (156-254)||(435053-435152)
chr2 (122-209)||(39095630-39095717)
chr2 (144-256)||(36103274-36103387)
chr2 (118-214)||(10818616-10818712)
chr2 (119-256)||(3123639-3123780)
chr2 (119-214)||(8031737-8031832)
chr2 (199-256)||(40965090-40965148)
chr2 (144-256)||(8550615-8550728)
chr2 (145-226)||(20027154-20027235)
chr2 (162-256)||(33755296-33755391)
chr2 (190-256)||(36155580-36155647)
chr2 (132-222)||(3487403-3487493)
chr2 (118-184)||(7648912-7648978)
chr2 (164-233)||(33602223-33602292)
chr2 (132-184)||(13222077-13222129)
chr2 (64-104)||(44194597-44194637)
chr2 (65-104)||(42881399-42881438)
chr2 (144-206)||(4794594-4794656)
chr2 (144-226)||(10069589-10069671)
chr2 (132-209)||(1908515-1908592)
chr2 (156-256)||(7213508-7213609)
chr2 (63-104)||(8385020-8385061)
chr2 (63-104)||(33602354-33602395)
chr2 (60-104)||(18181336-18181380)
chr2 (122-226)||(26273758-26273862)
chr2 (64-104)||(28526909-28526949)
chr2 (60-104)||(28572152-28572196)
chr2 (122-214)||(31592549-31592641)
[»] chr5 (55 HSPs)
chr5 (118-256)||(11099451-11099590)
chr5 (60-256)||(3725128-3725320)
chr5 (60-256)||(6610776-6610971)
chr5 (119-256)||(7613703-7613841)
chr5 (119-256)||(8692792-8692930)
chr5 (63-256)||(25814308-25814498)
chr5 (118-256)||(42575612-42575751)
chr5 (132-256)||(39183601-39183726)
chr5 (118-256)||(33988195-33988334)
chr5 (132-257)||(32539671-32539797)
chr5 (121-256)||(17935221-17935356)
chr5 (151-233)||(8369694-8369776)
chr5 (151-256)||(35646063-35646169)
chr5 (119-308)||(42211329-42211520)
chr5 (144-256)||(16283561-16283674)
chr5 (118-256)||(20189887-20190027)
chr5 (144-256)||(35334500-35334613)
chr5 (151-256)||(39008156-39008266)
chr5 (132-211)||(6735377-6735456)
chr5 (122-256)||(36469068-36469203)
chr5 (151-256)||(22582846-22582951)
chr5 (144-256)||(36446661-36446774)
chr5 (118-256)||(17242928-17243067)
chr5 (119-282)||(858331-858500)
chr5 (61-256)||(4412325-4412515)
chr5 (121-226)||(14259665-14259770)
chr5 (132-256)||(15254774-15254899)
chr5 (122-214)||(35585633-35585725)
chr5 (144-214)||(24231031-24231101)
chr5 (144-308)||(33012375-33012545)
chr5 (144-253)||(6629373-6629480)
chr5 (122-233)||(25108572-25108683)
chr5 (122-233)||(25167664-25167775)
chr5 (118-200)||(13135748-13135830)
chr5 (132-273)||(35666894-35667039)
chr5 (132-237)||(36006886-36006991)
chr5 (122-233)||(25111146-25111257)
chr5 (122-233)||(25170237-25170348)
chr5 (186-282)||(15814705-15814807)
chr5 (144-279)||(39060368-39060509)
chr5 (60-104)||(7276324-7276368)
chr5 (132-256)||(13422332-13422451)
chr5 (193-253)||(17741148-17741207)
chr5 (60-104)||(35585740-35585784)
chr5 (193-256)||(41184730-41184794)
chr5 (132-245)||(5357802-5357916)
chr5 (151-233)||(16926089-16926171)
chr5 (144-233)||(6172978-6173067)
chr5 (60-104)||(4044599-4044643)
chr5 (60-104)||(9426676-9426720)
chr5 (64-104)||(13422474-13422514)
chr5 (60-104)||(13597970-13598014)
chr5 (132-184)||(15564935-15564987)
chr5 (60-104)||(22582994-22583038)
chr5 (60-104)||(39008070-39008114)
[»] chr1 (57 HSPs)
chr1 (118-256)||(36467169-36467308)
chr1 (118-257)||(51749156-51749296)
chr1 (118-256)||(5040549-5040688)
chr1 (118-256)||(28839334-28839473)
chr1 (132-256)||(17724688-17724813)
chr1 (144-256)||(32587786-32587899)
chr1 (64-256)||(52830388-52830576)
chr1 (121-256)||(50267412-50267548)
chr1 (118-256)||(19532893-19533032)
chr1 (155-256)||(3555529-3555631)
chr1 (118-255)||(26755971-26756109)
chr1 (132-256)||(5442349-5442474)
chr1 (144-256)||(32348239-32348352)
chr1 (144-307)||(46536361-46536530)
chr1 (157-256)||(42926168-42926268)
chr1 (119-256)||(49494137-49494275)
chr1 (151-256)||(52432340-52432446)
chr1 (144-233)||(8773263-8773352)
chr1 (132-256)||(43895856-43895980)
chr1 (144-256)||(28277009-28277125)
chr1 (156-249)||(17342861-17342955)
chr1 (132-226)||(36784323-36784417)
chr1 (169-308)||(49944978-49945123)
chr1 (122-226)||(13500734-13500838)
chr1 (121-256)||(48242564-48242700)
chr1 (118-256)||(8327712-8327851)
chr1 (172-256)||(10370158-10370244)
chr1 (152-233)||(30749960-30750041)
chr1 (152-233)||(30771411-30771492)
chr1 (119-256)||(46496014-46496150)
chr1 (156-233)||(7785270-7785349)
chr1 (144-233)||(27831867-27831956)
chr1 (132-233)||(34877088-34877189)
chr1 (157-256)||(45889221-45889322)
chr1 (135-296)||(27391359-27391526)
chr1 (135-307)||(16040089-16040267)
chr1 (132-226)||(21304393-21304487)
chr1 (143-257)||(51848665-51848782)
chr1 (132-256)||(40019768-40019893)
chr1 (132-198)||(948620-948686)
chr1 (122-184)||(41968170-41968232)
chr1 (156-253)||(46880448-46880546)
chr1 (195-256)||(21304781-21304842)
chr1 (144-256)||(2571384-2571495)
chr1 (122-214)||(45305852-45305944)
chr1 (65-104)||(17342774-17342813)
chr1 (186-256)||(28908150-28908223)
chr1 (156-277)||(34813950-34814077)
chr1 (132-210)||(914756-914834)
chr1 (144-226)||(29225413-29225495)
chr1 (132-214)||(30903244-30903326)
chr1 (194-256)||(37525111-37525172)
chr1 (171-232)||(7787710-7787771)
chr1 (63-104)||(34877212-34877253)
chr1 (132-209)||(52382408-52382485)
chr1 (60-104)||(11425992-11426036)
chr1 (60-104)||(27698753-27698797)
[»] scaffold0006 (1 HSPs)
scaffold0006 (118-256)||(229818-229956)
[»] scaffold0034 (1 HSPs)
scaffold0034 (118-256)||(98820-98959)
[»] scaffold0321 (1 HSPs)
scaffold0321 (165-252)||(9529-9617)
[»] scaffold0221 (1 HSPs)
scaffold0221 (119-213)||(8883-8977)
[»] scaffold0058 (1 HSPs)
scaffold0058 (144-256)||(14477-14590)
[»] scaffold0028 (1 HSPs)
scaffold0028 (121-256)||(26611-26740)
[»] scaffold0007 (1 HSPs)
scaffold0007 (132-255)||(230265-230389)
[»] scaffold0685 (1 HSPs)
scaffold0685 (132-209)||(6421-6498)


Alignment Details
Target: chr6 (Bit Score: 285; Significance: 1e-159; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 274 - 608
Target Start/End: Original strand, 4611451 - 4611790
Alignment:
Q  274 caaatgactaagtgaatttaggactgagggagtattatttttgggcaaaaaa-ccagaatcatttctgttaaatgcgatgaatctgttataccttttcta 372  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  4611451 caaatgactaagtgaatttaggaccgagggagtattatttttggggaaaaaaaccagaatcatttctgttaaatgtgatgaatctgttataccttttcta 4611550  T
Q  373 ataattgagttgaatgatataaaattatattttgaatatgtag-----agtgcagctgcagcatatatatattttggatggataagtcttgatgatatca 467  Q
    |||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4611551 ataattgagttgaatgatataaaattatattttgaatatgtagagtagagtgcagctgcagcatatatatattttggatggataagtcttgatgatatca 4611650  T
Q  468 gatagtgtttcgttgtgtagcttgcatgagctcaagaataaaacttatggtggaggtccacaatcatatatttattgatttagtggaccttgcactaata 567  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4611651 gatagtgtttcgttgtgcggcttgcatgagctcaagaataaaacttatggtggaggtccacaatcatatatttattgatttagt-gaccttgcactaata 4611749  T
Q  568 tttgtccaattaaattaaatagtctttataatcgtggaaag 608  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4611750 tttgtccaattaaattaaatagtctttataatcgtggaaag 4611790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 366 - 536
Target Start/End: Complemental strand, 4515512 - 4515344
Alignment:
Q  366 ttttctaataattgagttgaatgatataaaattatattttgaatatgtagagtgcagctgcagcatatatatattttggatggataagtcttgatgatat 465  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||| | ||    
T  4515512 ttttctattaatcgagttgaatgatataaaattatattttgaatatgtagagtgaagctgcagcatatatatattttggatgaatgagtcttgataacat 4515413  T
Q  466 cagatagtgtttcgttgtgtagcttgcatgagctcaagaataaaacttatggtggaggtccacaatcatat 536  Q
    |||| | ||||||  |||||||||||||| |||| | ||| |||||||||||||| |||||||||||||||    
T  4515412 cagacactgtttc--tgtgtagcttgcataagcttaggaacaaaacttatggtggtggtccacaatcatat 4515344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 4611336 - 4611438
Alignment:
Q  190 tggagaatgcatcaatacttaacaaaagcacttaaaacaattttctctatccttcatttatacatttaataaatgtgaaatgagcaaatgactaagtgaa 289  Q
    |||| |||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4611336 tggaaaatgcaccaatacttaacaaaagcacttaaaatcattttctctatccttcatttatacatttaataaatgtgaaatgagcaaatgactaagtgaa 4611435  T
Q  290 ttt 292  Q
    |||    
T  4611436 ttt 4611438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 31265775 - 31265913
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 218  Q
    ||||||||| |  ||||||||||  |||||  |||||||||| |||||||| |||||| ||||||| ||||||||||||||| ||||||||||||| |||    
T  31265775 cctttataactctaattaatattactttcacaacttccaattcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagagc 31265874  T
Q  219 acttaaaac-aattttctctatccttcatttatacattt 256  Q
    ||||||||| | |||||||| ||||||||||||||||||    
T  31265875 acttaaaactatttttctctctccttcatttatacattt 31265913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 60 - 256
Target Start/End: Complemental strand, 30064115 - 30063922
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaat 159  Q
    |||||||||||||||| |  ||||||||| |||||||||||||||  |||        |||||||||| |  ||||||||||  |||||||||| |||||    
T  30064115 gtcctaaaataactgagtcatttcactttccaatacaatattaat--tactttttt--ccctttataactctaattaatattactttcatcactcccaat 30064020  T
Q  160 ttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcatttatacattt 256  Q
    | |||||||| ||||||||||||||||||||||||||| ||  ||||||||| |||||||||||||||   |||||| | ||||||||||||||||||    
T  30064019 tcaatatattccactttgcatttataatagtggagaatacacaaatacttaataaaagcacttaaaactttttttctttctccttcatttatacattt 30063922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 60 - 256
Target Start/End: Complemental strand, 3604766 - 3604573
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaat 159  Q
    |||||||||||||||| |  |||||||||||||||||||||||||  |          |||||||||| |  ||||||||||  |||||  |||||||||    
T  3604766 gtcctaaaataactgagtcatttcacttttcaatacaatattaattat----ttttttccctttataactctaattaatattactttcacaacttccaat 3604671  T
Q  160 ttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacattt 256  Q
    | |||||||| ||||||||||||| |||| ||||||||||| ||||||||||||| || |||||||| || |||||||| || || ||||||||||||    
T  3604670 tcaatatattccactttgcatttacaataatggagaatgcaccaatacttaacaagagaacttaaaaccatttttctctctcttttatttatacattt 3604573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 132 - 250
Target Start/End: Complemental strand, 14306339 - 14306220
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caat 230  Q
    |||||||| | | |||||||||  |||||||||| |||||||||| ||||||| ||| ||||||||||| ||||||||||||||| ||||||||| || |    
T  14306339 aattaataatatgttcatcactctcaatttaatacatttcactttacatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccatt 14306240  T
Q  231 tttctctatccttcatttat 250  Q
    ||||| | ||||||||||||    
T  14306239 tttctatgtccttcatttat 14306220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 132 - 256
Target Start/End: Complemental strand, 14312746 - 14312621
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caat 230  Q
    |||||||| | | |||||||||  ||||| |||| |||||||||| ||||||| ||| ||||||||||| ||||||||||||||| ||||||||| || |    
T  14312746 aattaataatatgttcatcactctcaattcaatacatttcactttacatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccatt 14312647  T
Q  231 tttctctatccttcatttatacattt 256  Q
    ||||| | |||||||||||| |||||    
T  14312646 tttctatgtccttcatttatgcattt 14312621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 60 - 256
Target Start/End: Original strand, 15081364 - 15081557
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaat 159  Q
    |||| ||||||||||||   |||||||||||||||||||||||||  |||        |||||||||| |  |||||||| |  |||||| | |||||||    
T  15081364 gtcccaaaataactgaacaatttcacttttcaatacaatattaat--tactttttt--ccctttataactctaattaatactactttcataatttccaat 15081459  T
Q  160 ttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcatttatacattt 256  Q
    | |||||||| |||||| | ||||| |||||||||||||||  ||||||||||||  ||||||||||| | ||||||||  |||||||||||||||||    
T  15081460 tcaatatattccactttacgtttatgatagtggagaatgcacaaatacttaacaagtgcacttaaaactatttttctctcaccttcatttatacattt 15081557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 151 - 257
Target Start/End: Original strand, 4238449 - 4238554
Alignment:
Q  151 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttctctatccttcatttat 250  Q
    |||| ||||| |||| |||||||||| ||||||| |||||| |||||||| ||||||||||||| |||||||||||| || || ||| || |||||||||    
T  4238449 actttcaattcaatagatttcactttacatttatgatagtgaagaatgcaccaatacttaacaagagcacttaaaactatatt-tctctctttcatttat 4238547  T
Q  251 acattta 257  Q
    |||||||    
T  4238548 acattta 4238554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 7301192 - 7301055
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  || |||||||  |||||||| || ||||| |||||||| |||||| ||||||| ||| |||||||||||  |||||||||||||      
T  7301192 ccctttataactctaactaatattactttcatcattttcaattcaatatattccactttacatttatgataatggagaatgcacaaatacttaacaaaca 7301093  T
Q  218 cacttaaaacaattttctctatccttcatttatacattt 256  Q
    |||||||||| ||||| ||| || || ||||||||||||    
T  7301092 cacttaaaactatttt-tctctcatttatttatacattt 7301055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 123 - 251
Target Start/End: Original strand, 2657901 - 2658030
Alignment:
Q  123 tataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcactt 222  Q
    |||||||  ||||||||||  ||||||||||||||||| ||||||||||||||| |||| ||  || | |||||  || |||||||||||||||| ||||    
T  2657901 tataattctaattaatattactttcatcacttccaattcaatatatttcactttacattaatggtactagagaagacaccaatacttaacaaaagtactt 2658000  T
Q  223 aaaa-caattttctctatccttcatttata 251  Q
    |||| || |||||||| |  ||||||||||    
T  2658001 aaaatcatttttctctcttattcatttata 2658030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 7167758 - 7167842
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaa 216  Q
    |||||||||| |||| ||||||||||||| || |||||| |||||||||| || ||| || | ||||||||||||||||||||||    
T  7167758 aattaatattttttttatcacttccaattcaacatattttactttgcattcatgataatgtaaaatgcatcaatacttaacaaaa 7167842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 282
Target Start/End: Complemental strand, 34915886 - 34915753
Alignment:
Q  157 aatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattt---tctctatccttcatttataca 253  Q
    |||| |||||||| |||||||||||||| ||| ||||||||||| |||||||||||  || |||||||||  ||||   ||||| || ||| ||||||||    
T  34915886 aattcaatatattccactttgcatttatgataatggagaatgcaccaatacttaacgtaaacacttaaaatcatttctctctctctctttcgtttataca 34915787  T
Q  254 t-----ttaataaatgtgaaatgagcaaatgact 282  Q
    |     |||||| |||||||||||||||||||||    
T  34915786 tttttcttaatatatgtgaaatgagcaaatgact 34915753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 9755258 - 9755120
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 218  Q
    ||||||||| |  |||||||||| ||||||||| || ||||| ||||||||  ||| | ||||||| ||||||||||||| | ||||||||||||   |     
T  9755258 cctttataactgtaattaatattattttcatcattttcaattcaatatattctactctacatttatgatagtggagaatgtaccaatacttaacacgtga 9755159  T
Q  219 acttaaaac-aattttctctatccttcatttatacattt 256  Q
    ||||||||| | |||||||| | ||||||||||| ||||    
T  9755158 acttaaaactatttttctctcttcttcatttatatattt 9755120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 280
Target Start/End: Complemental strand, 7739576 - 7739462
Alignment:
Q  172 actttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcatttatacat-----ttaataaatgt 265  Q
    ||||| ||||||||||| ||| ||||||||||||||||||||||| || || |||| | |||||| | || |||| ||||||||     ||| || ||||    
T  7739576 actttacatttataataatggtgaatgcatcaatacttaacaaaaacattttaaactatttttctatctctttcacttatacatttttcttattacatgt 7739477  T
Q  266 gaaatgagcaaatga 280  Q
    |||||||||||||||    
T  7739476 gaaatgagcaaatga 7739462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 26356268 - 26356330
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttat 184  Q
    |||||| || |||||||| |  |||||||||||| |||| |||||||||||||||||||||||    
T  26356268 ttataactttaattaatactactttcatcacttctaattcaatatatttcactttgcatttat 26356330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 16126220 - 16126272
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttat 184  Q
    |||||||||| |||||||| ||||||||| ||||||||  |||||||||||||    
T  16126220 aattaatattattttcatctcttccaattcaatatattatactttgcatttat 16126272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 256
Target Start/End: Complemental strand, 8569702 - 8569613
Alignment:
Q  165 atatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacattt 256  Q
    |||||||||||||||||||| ||||||| |||| || ||||||   |||||| ||||||||| || |||||| | || |||| ||||||||||    
T  8569702 atatttcactttgcatttatgatagtggtgaatacaccaatac---acaaaaacacttaaaatcatttttctttctcattcacttatacattt 8569613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 8569837 - 8569787
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcattt 182  Q
    ||||||||||  ||||| ||||  |||||||||||||||||||||||||||    
T  8569837 aattaatattactttcaccactctcaatttaatatatttcactttgcattt 8569787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 233
Target Start/End: Original strand, 117100 - 117189
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt 233  Q
    ||||||||||  ||||| |||||||| ||||||| |||||| ||  ||||||||||| ||||  ||||||| ||  |||||||| |||||    
T  117100 tttcatcactctcaattcaatatattccactttgtatttatgatcatggagaatgcaccaatttttaacaagagtccttaaaaccatttt 117189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 33109406 - 33109507
Alignment:
Q  156 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcatttatacat 254  Q
    ||||| ||||||||||| ||| |||| |  |||||||||||||||  |||| |||||||  ||| ||||||| | |||||||| || ||||| |||||||    
T  33109406 caattcaatatatttcattttacattaacgatagtggagaatgcacaaatatttaacaagtgcatttaaaactatttttctctctcattcatctatacat 33109505  T
Q  255 tt 256  Q
    ||    
T  33109506 tt 33109507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 7359184 - 7359228
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||| ||||||||||||   |||||||||||||||||||||||||    
T  7359184 gtcccaaaataactgaaccatttcacttttcaatacaatattaat 7359228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 20383784 - 20383824
Alignment:
Q  64 taaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||||| || |||||||||| ||||||||||||||    
T  20383784 taaaataactgacttatttcactttttaatacaatattaat 20383824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 28539017 - 28539061
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataata 188  Q
    |||||||||||  |||||||||||||  |||||||||||||||||    
T  28539017 tttcatcacttttaatttaatatattctactttgcatttataata 28539061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 3e-65; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 60 - 256
Target Start/End: Original strand, 9017740 - 9017935
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaat 159  Q
    |||||||||||||||| | ||||||||||||||||||||||||||  |||        ||||||||||||||||||||||||||||||||||||||||||    
T  9017740 gtcctaaaataactgagtcgtttcacttttcaatacaatattaat--tacttttttttccctttataatttcaattaatattgttttcatcacttccaat 9017837  T
Q  160 ttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcatttatacattt 256  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||| || |||||||||||||||    
T  9017838 tcaatatatttcactttgcatttataatagtggagaatgcaccaatacttaacaaaagcacttaaaactatttttctctctctttcatttatacattt 9017935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 43639595 - 43639489
Alignment:
Q  151 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcattta 249  Q
    |||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| || |||||||| |||||||||||    
T  43639595 acttccaattcaatatatttcactttgcatttatgatagtggaaaatgcatcaatacttaacaacagcacttaaaaccatttttctctctccttcattta 43639496  T
Q  250 tacattt 256  Q
    || ||||    
T  43639495 tatattt 43639489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 54122303 - 54122197
Alignment:
Q  151 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcattta 249  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| || ||||||| | |||||||| |||||||||||    
T  54122303 acttccaattcaatatatttcactttgcatttatgatagtggagaatgcaccaatacttaacaaaaacatttaaaactatttttctctctccttcattta 54122204  T
Q  250 tacattt 256  Q
    |||||||    
T  54122203 tacattt 54122197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 26134789 - 26134676
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaa-ttttctctatcct 242  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||||||||||||  |  |||||||||||| |||||||||||||| |||||||| ||||    
T  26134789 tttcatcactcccaattcaatatatttcactttgcatttatgatagtggagaatagactaatacttaacaagagcacttaaaacaatttttctctctcct 26134690  T
Q  243 tcatttatacattt 256  Q
    ||||||||||||||    
T  26134689 tcatttatacattt 26134676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 32023213 - 32023073
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  ||||||||||  ||||||||||  ||||| ||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||    
T  32023213 ccctttataactctaattaatattactttcatcactctcaattcaatatattcaactttgcatttataatagtggagaatgcaccaatacttaacaaaag 32023114  T
Q  218 cacttaaaac--aattttctctatccttcatttatacattt 256  Q
     |||||||||  | |||||| | ||||||||||||||||||    
T  32023113 tacttaaaacttatttttctatctccttcatttatacattt 32023073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 39866639 - 39866526
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatcct 242  Q
    ||||||||||  ||||| ||| ||||||||||||||||||| |||||||||||| || ||||||||||||||| |||||||||| | |||||||| ||||    
T  39866639 tttcatcactcacaattcaatgtatttcactttgcatttatgatagtggagaatacaccaatacttaacaaaatcacttaaaactatttttctctttcct 39866540  T
Q  243 tcatttatacattt 256  Q
    ||||||||||||||    
T  39866539 tcatttatacattt 39866526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 132 - 282
Target Start/End: Original strand, 2868583 - 2868739
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatt 231  Q
    ||||||||||  |||||||||| ||||||  || |||| |||||||||||||| | ||||||||||||| |||||| ||||||||| ||||||||| |||    
T  2868583 aattaatattactttcatcactcccaattcgatttattccactttgcatttatgacagtggagaatgcagcaatacataacaaaagaacttaaaaccatt 2868682  T
Q  232 tt-ctctatccttcatttatacattt-----aataaatgtgaaatgagcaaatgact 282  Q
    || |||| ||||||||||||||||||     ||||  ||||||||||||||||||||    
T  2868683 tttctctctccttcatttatacatttttcttaatatgtgtgaaatgagcaaatgact 2868739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 11251213 - 11251100
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcct 242  Q
    ||||||||||  |||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||||||| ||||||||||| || |||| ||| || |    
T  11251213 tttcatcactcacaatttaatatagttcaatttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaatcatttttttctctcat 11251114  T
Q  243 tcatttatacattt 256  Q
    ||||||||||||||    
T  11251113 tcatttatacattt 11251100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 132 - 307
Target Start/End: Complemental strand, 17777092 - 17776911
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatt 231  Q
    |||||||||| |||||||||||  | ||| |||||||| ||||||||||||||  ||||||||||||||  ||||||||| |||||||| |||||| |||    
T  17777092 aattaatattattttcatcactctcgattcaatatattccactttgcatttatggtagtggagaatgcacaaatacttaaaaaaagcacctaaaaccatt 17776993  T
Q  232 tt-ctctatccttcatttatacattt-----aataaatgtgaaatgagcaaatgactaagtgaatttaggactgagggagta 307  Q
    || |||| || |||||||||||||||     ||||  |||||||||||||||||||| ||| ||| | |||| |||| ||||    
T  17776992 tttctctctcattcatttatacattttttttaatacgtgtgaaatgagcaaatgactcagttaatctgggacggaggaagta 17776911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 132 - 307
Target Start/End: Complemental strand, 19078393 - 19078212
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatt 231  Q
    |||||||||| |||||||||||  | ||| |||||||| ||||||||||||||  ||||||||||||||  ||||||||| |||||||| |||||| |||    
T  19078393 aattaatattattttcatcactctcgattcaatatattccactttgcatttatggtagtggagaatgcacaaatacttaaaaaaagcacctaaaaccatt 19078294  T
Q  232 tt-ctctatccttcatttatacattt-----aataaatgtgaaatgagcaaatgactaagtgaatttaggactgagggagta 307  Q
    || |||| || |||||||||||||||     ||||  |||||||||||||||||||| ||| ||| | |||| |||| ||||    
T  19078293 tttctctctcattcatttatacattttttttaatacgtgtgaaatgagcaaatgactcagttaatctgggacggaggaagta 19078212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 144 - 233
Target Start/End: Original strand, 48744280 - 48744369
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt 233  Q
    |||||||| || ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||    
T  48744280 tttcatcattttcaattcaatatatttcactttacatttatgatagtggagaatgcatcaatacttaacaaatgcacttaaaactatttt 48744369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 144 - 285
Target Start/End: Original strand, 10855015 - 10855162
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt-ctctatcct 242  Q
    ||||||||||| ||||| |||||||| |||||||||||||| | |||||| |||||| |||||| ||| |||| |||||||||| ||||| |||| ||||    
T  10855015 tttcatcactttcaattcaatatattccactttgcatttatgagagtggataatgcaccaatacataataaaaacacttaaaactatttttctctctcct 10855114  T
Q  243 tcatttatacattta-----ataaatgtgaaatgagcaaatgactaag 285  Q
    |||||||||||||||     |||  |||||||||| ||||||||||||    
T  10855115 tcatttatacatttatcttaatacgtgtgaaatgatcaaatgactaag 10855162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 32827416 - 32827277
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||||| |  |||||||| ||| |||| ||||||||||||||| ||||||| ||||||||||||||| |||||| ||||||  |    
T  32827416 ccctttataactctaattaatactactttcatcatttctaattcaatatatttcactttacatttatgatagtggagaatgcaccaatacgtaacaagtg 32827317  T
Q  218 cacttaaaac-aattttctctatccttcatttatacattt 256  Q
    |||||||||| | |||| ||| ||||||||||||||||||    
T  32827316 cacttaaaactatttttttctctccttcatttatacattt 32827277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 121 - 309
Target Start/End: Complemental strand, 53876545 - 53876351
Alignment:
Q  121 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcac 220  Q
    |||||||||  ||||||| ||  ||||||||||  ||||| ||||||||||||||| ||||||| |||||||| ||||||  |||| |||||||||||||    
T  53876545 tttataattctaattaattttactttcatcactctcaattcaatatatttcactttacatttatgatagtggaaaatgcacaaatatttaacaaaagcac 53876446  T
Q  221 ttaaaa-caattttctctatccttcatttatacat-----ttaataaatgtgaaatgagcaaatgactaagtgaatttaggactgagggagtatt 309  Q
    |||||| || |||| ||  ||||||||||||||||     ||||||  | |||||| | ||||||||| ||| |||| ||||| |||||||||||    
T  53876445 ttaaaatcatttttttcactccttcatttatacatttttcttaatatctatgaaataaacaaatgactcagttaattgaggacggagggagtatt 53876351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 144 - 233
Target Start/End: Original strand, 26832092 - 26832181
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt 233  Q
    |||||||||| ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||| || ||||| |||||| |||||    
T  26832092 tttcatcactaccaatttaatatatttcactttgcatttatggtggtggagaatgcatcaatacttaataagagcacgtaaaactatttt 26832181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 132 - 306
Target Start/End: Complemental strand, 14756212 - 14756032
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatt 231  Q
    |||||||| | |||| |||| || ||||||||||||||  ||||||||||||| ||||||||||||| | || |||||||||| |||||||||||  |||    
T  14756212 aattaatactatttttatcattttcaatttaatatattctactttgcatttatgatagtggagaatgtaccagtacttaacaagagcacttaaaattatt 14756113  T
Q  232 tt-ctctatccttcatttatacattt-----aataaatgtgaaatgagcaaatgactaagtgaatttaggactgagggagt 306  Q
    || |||| ||||| | ||||||||||     ||||  ||| |||||||||||||||| ||| ||| |||||| ||||||||    
T  14756112 tttctctctcctttaattatacatttttcttaatatgtgtaaaatgagcaaatgactcagttaatctaggacagagggagt 14756032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 36097752 - 36097632
Alignment:
Q  133 attaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caatt 231  Q
    |||||||||  ||||||||||  ||||| |||||||| |||||||||||| ||| ||||||||||||| | ||||||||||| || |||||||| || ||    
T  36097752 attaatattactttcatcactctcaattcaatatattccactttgcatttctaacagtggagaatgcaccgatacttaacaagagtacttaaaaccattt 36097653  T
Q  232 ttctctatccttcatttatac 252  Q
    |||||| ||||||||||||||    
T  36097652 ttctctctccttcatttatac 36097632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 118 - 248
Target Start/End: Original strand, 54493903 - 54494034
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||||| |  |||||||| |||||||||||||||||||||||| ||||||| |||||||||||| |  |||||||||||||  |    
T  54493903 ccctttataactctaattaatactactttcatcatttccaatttaatatatttcactttacatttatgatagtggagaatacgccaatacttaacaagtg 54494002  T
Q  218 cacttaaaacaat-tttctctatccttcattt 248  Q
    |||||||||| || ||||||| | ||||||||    
T  54494003 cacttaaaactatatttctctcttcttcattt 54494034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 54845602 - 54845491
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatcct 242  Q
    |||||| ||||| |||| |||||||| |||||||||||||| ||| | ||||||||||| || |||||||||| |||||||||| | |||||||| ||||    
T  54845602 tttcattacttctaattcaatatattccactttgcatttatgatactagagaatgcatcgatccttaacaaaaacacttaaaactatttttctctctcct 54845503  T
Q  243 tcatttatacat 254  Q
    ||||||||||||    
T  54845502 tcatttatacat 54845491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 5245433 - 5245546
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatcct 242  Q
    ||||||||||  ||||| |||||||| ||||||| |||||| ||| |||||||| || ||||||||||||| |||||||||||| | |||||||| ||||    
T  5245433 tttcatcactctcaattcaatatattccactttgtatttatgatattggagaatacaccaatacttaacaagagcacttaaaactatttttctctctcct 5245532  T
Q  243 tcatttatacattt 256  Q
    |||| |||||||||    
T  5245533 tcatgtatacattt 5245546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 33994696 - 33994791
Alignment:
Q  162 aatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacattt 256  Q
    |||||||| |||||| ||||||| ||||||||||||||| |||||||||||||  ||||||||||  | |||||||| ||||||||||||||||||    
T  33994696 aatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaattatttttctctctccttcatttatacattt 33994791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 21296582 - 21296476
Alignment:
Q  151 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcattta 249  Q
    |||||||||| ||||||||  ||||||||||||| |||||| | |||||| ||||||||||||| |||| |||||| || ||| |||| |||||||||||    
T  21296582 acttccaattcaatatattctactttgcatttatgatagtgaaaaatgcaccaatacttaacaagagcatttaaaatcattttcctctctccttcattta 21296483  T
Q  250 tacattt 256  Q
    |||||||    
T  21296482 tacattt 21296476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 54458407 - 54458313
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa 226  Q
    |||||||||||||||| ||| |  ||||| |||||||| |||||| ||||||| ||| ||||||||||| | ||||||||||||| |||||||||    
T  54458407 aattaatattgttttcctcattctcaattcaatatattccactttacatttatgataatggagaatgcacccatacttaacaaaatcacttaaaa 54458313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 121 - 233
Target Start/End: Original strand, 41031570 - 41031685
Alignment:
Q  121 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcat---ttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    ||||||| || |||||||| |  |||||||| |||||||| ||||||||||||||| |||   |||| |||||||| |||||| |||||||||||||  |    
T  41031570 tttataactttaattaatactactttcatcatttccaattcaatatatttcactttacatttattatgatagtggaaaatgcaccaatacttaacaagtg 41031669  T
Q  218 cacttaaaacaatttt 233  Q
    |||||||||| |||||    
T  41031670 cacttaaaactatttt 41031685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 45392099 - 45392224
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatt 231  Q
    ||||||||||  |||||||| |||||||| ||||||||||||||| ||||||  ||||| || |||||| ||||| ||||||||  |||||||||| |||    
T  45392099 aattaatattactttcatcatttccaattcaatatatttcactttacatttacgatagtagataatgcaccaatagttaacaaattcacttaaaactatt 45392198  T
Q  232 t-tctctatccttcatttatacattt 256  Q
    | ||| | ||||| ||||||| ||||    
T  45392199 tctctttctcctttatttatatattt 45392224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 148 - 256
Target Start/End: Original strand, 54782988 - 54783097
Alignment:
Q  148 atcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcat 246  Q
    |||| |||||||| ||||||||||||||| ||||||| |||| | | |||||| |||||||||| ||  ||||||||||| | |||||||| || |||||    
T  54782988 atcatttccaattcaatatatttcactttacatttatgatagcgcataatgcaccaatacttaagaagtgcacttaaaactatttttctctctcattcat 54783087  T
Q  247 ttatacattt 256  Q
    ||||||||||    
T  54783088 ttatacattt 54783097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 11529209 - 11529122
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagca 219  Q
    ||||||||||  ||| ||||||   ||||||||||||| |||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  11529209 aattaatattacttttatcactcataatttaatatattccactttgcatttatgatattggagaatgtatcaatacttaacaagagca 11529122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 132 - 256
Target Start/End: Complemental strand, 1772205 - 1772079
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatattt-cactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caa 229  Q
    ||||||||||  |||||||||| | |||| |||||| |  |||||||| ||||| ||||||||||||  | ||||||||||||| | ||||||||| ||     
T  1772205 aattaatattactttcatcactcctaattcaatataatcacactttgcttttatgatagtggagaatataccaatacttaacaagaacacttaaaaccat 1772106  T
Q  230 ttttctctatccttcatttatacattt 256  Q
    |||||||| ||||| ||||||||||||    
T  1772105 ttttctctctcctttatttatacattt 1772079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 144 - 257
Target Start/End: Original strand, 15280626 - 15280739
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcct 242  Q
    |||||||||| |||||| |||||||| |||||| ||||||| |||||||||||| || | ||| | |||||  |||||||||| || |||| ||| ||||    
T  15280626 tttcatcactcccaattcaatatattccactttccatttatgatagtggagaataca-cgatagtgaacaagtgcacttaaaatcatttttatctctcct 15280724  T
Q  243 tcatttatacattta 257  Q
    |||||||||||||||    
T  15280725 tcatttatacattta 15280739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 256
Target Start/End: Original strand, 8706190 - 8706280
Alignment:
Q  163 atatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacattt 256  Q
    ||||||| ||||||||||||||    ||| |||||||||||||||||||||| ||||||||||| || || ||||| | ||||||||||||||||    
T  8706190 atatattccactttgcatttat----gtgaagaatgcatcaatacttaacaagagcacttaaaatcatttctctctcttcttcatttatacattt 8706280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 256
Target Start/End: Original strand, 9058077 - 9058167
Alignment:
Q  163 atatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacattt 256  Q
    ||||||| ||||||||||||||    ||| |||||||||||||||||||||| ||||||||||| || || ||||| | ||||||||||||||||    
T  9058077 atatattccactttgcatttat----gtgaagaatgcatcaatacttaacaagagcacttaaaatcatttctctctcttcttcatttatacattt 9058167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 227
Target Start/End: Original strand, 15082023 - 15082106
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac 227  Q
    ||||||||||  ||||||||||||||||| ||||| ||||| ||| ||||||||||| ||||| ||||  | ||||||||||||    
T  15082023 tttcatcactctcaatttaatatatttcattttgcttttatgataatggagaatgcaccaatatttaaagagagcacttaaaac 15082106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 22202463 - 22202405
Alignment:
Q  156 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 214  Q
    ||||||||||||||  ||||||||||||| |||||||| |||||| |||||||||||||    
T  22202463 caatttaatatattcaactttgcatttatgatagtggataatgcaccaatacttaacaa 22202405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 46786067 - 46786014
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaat 197  Q
    ||||||| || |||||| ||||||||||||||||||||||| ||||||||||||    
T  46786067 tttcatcgctcccaattcaatatatttcactttgcatttatgatagtggagaat 46786014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 55415513 - 55415412
Alignment:
Q  156 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacat 254  Q
    ||||| ||||| | |||||||| |||||| |||||  |||||||| ||||||||||||||| || |||||| || |||||||| || || ||||||||||    
T  55415513 caattcaatatgtgtcactttgtatttatgatagtaaagaatgcaccaatacttaacaaaaacagttaaaaccatttttctctctcatttatttatacat 55415414  T
Q  255 tt 256  Q
    ||    
T  55415413 tt 55415412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 26142950 - 26143035
Alignment:
Q  174 tttgcatttataatagtggagaatgcatcaatacttaacaaaagcac---ttaaaacaattttctctatccttcatttatacattt 256  Q
    ||||||||||| ||||||||||||||| |||||||||| || || ||   | ||| ||||||||||| ||||| ||||||||||||    
T  26142950 tttgcatttatgatagtggagaatgcaccaatacttaaaaagagaacctataaaaccaattttctctctcctttatttatacattt 26143035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 12744835 - 12744897
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaata 206  Q
    |||||||||| | |||| |||||| | |||||||||||| ||||||||||||||||| |||||    
T  12744835 tttcatcactcctaattcaatataatccactttgcatttctaatagtggagaatgcaccaata 12744897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 37041959 - 37041906
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaat 197  Q
    |||||||| |||||||| |||||||||||||||  |||||| ||||||||||||    
T  37041959 tttcatcatttccaattcaatatatttcactttatatttatgatagtggagaat 37041906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 52325210 - 52325311
Alignment:
Q  156 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacat 254  Q
    ||||| |||||||| |||||||||||||| |||| | |||||||| |||||| |||||| | |||| |||| |  |||||| | ||||| ||||||||||    
T  52325210 caattcaatatattccactttgcatttatgatagcgtagaatgcaccaatacataacaataacactaaaaaccctttttctatctcctttatttatacat 52325309  T
Q  255 tt 256  Q
    ||    
T  52325310 tt 52325311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 44234111 - 44234223
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttctctatcctt 243  Q
    |||||||| || ||||| ||||||||||||||||||||||  ||| || |||| | | |||||||||| || | || ||||||  || |||| | |||||    
T  44234111 tttcatcaatttcaattcaatatatttcactttgcatttacgataatgaagaacgtaccaatacttaataagaacatttaaaatcatcttctatctcctt 44234210  T
Q  244 catttatacattt 256  Q
    || ||||||||||    
T  44234211 cacttatacattt 44234223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 53583627 - 53583576
Alignment:
Q  163 atatatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 214  Q
    |||||||  ||||||||||||||||| || ||||||||||||||||| ||||    
T  53583627 atatattctactttgcatttataataatgaagaatgcatcaatacttgacaa 53583576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 39365071 - 39365010
Alignment:
Q  197 tgcatcaatacttaacaaaagcacttaaaacaa--ttttctctatccttcatttatacattt 256  Q
    |||| ||||||||||||| |||||||||||| |  |||||||| ||||| ||||||||||||    
T  39365071 tgcaccaatacttaacaagagcacttaaaaccactttttctctctcctttatttatacattt 39365010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 49003280 - 49003338
Alignment:
Q  133 attaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtg 191  Q
    ||||||||| |||||||||||| ||||| |||||||| ||| || ||||||| ||||||    
T  49003280 attaatattcttttcatcactttcaattcaatatattccaccttacatttatgatagtg 49003338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 49006269 - 49006331
Alignment:
Q  195 aatgcatcaatacttaacaaaagcacttaaaacaattttc-tctatccttcatttatacattt 256  Q
    |||| ||||||||||||| ||| |||||||||| |||||| | | ||||||||||||||||||    
T  49006269 aatggatcaatacttaactaaaacacttaaaactattttcatatctccttcatttatacattt 49006331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 50150475 - 50150413
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttat 184  Q
    ||||||||  |||||||||| |||||| |||| |||||||||||||||| | ||| |||||||    
T  50150475 ttataattctaattaatattattttcaccactcccaatttaatatattttaatttacatttat 50150413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 8706089 - 8706130
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatatt 101  Q
    ||||||||| ||||||  ||||||||||||||||||||||||    
T  8706089 gtcctaaaaaaactgacatgtttcacttttcaatacaatatt 8706130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 9057976 - 9058017
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatatt 101  Q
    ||||||||| ||||||  ||||||||||||||||||||||||    
T  9057976 gtcctaaaaaaactgacatgtttcacttttcaatacaatatt 9058017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 2868515 - 2868559
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    ||||||||||||||||    |||||||||||||||||||||||||    
T  2868515 gtcctaaaataactgatccatttcacttttcaatacaatattaat 2868559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 32023267 - 32023223
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||||||||| |  ||||||||| |||||||||||||||    
T  32023267 gtcctaaaataactgagtcatttcactttccaatacaatattaat 32023223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 122 - 214
Target Start/End: Complemental strand, 39329858 - 39329766
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 214  Q
    ||||||||  |||||||| |  ||||||||||  ||||| ||||||||  ||||||||||||| |||    |||||||| |||||||||||||    
T  39329858 ttataattctaattaatactactttcatcactctcaattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaacaa 39329766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 43640731 - 43640687
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||| ||||||||||| |  |||||||||||||||||||||||||    
T  43640731 gtcccaaaataactgagtcatttcacttttcaatacaatattaat 43640687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 8e-41; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 123 - 256
Target Start/End: Original strand, 27234503 - 27234636
Alignment:
Q  123 tataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcactt 222  Q
    ||||| || |||||||| | |||||||||||  ||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  27234503 tataactttaattaatactattttcatcactcacaatttaatatatttcgttttgcatttatgatagtggagaatgcatcaatacttaacaaaaacactt 27234602  T
Q  223 aaaacaattttctctatccttcatttatacattt 256  Q
    ||||||||||||||| || |||||||||||||||    
T  27234603 aaaacaattttctctgtcattcatttatacattt 27234636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 37490730 - 37490591
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    ||||||||||||  ||||||||||  ||| ||||||  ||||| |||||||| |||||||||||||| ||||||||||||||| |||||||||| ||||     
T  37490730 ccctttataattctaattaatattacttttatcactatcaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaaaaaaaa 37490631  T
Q  218 cacttaaaa-caattttctctatccttcatttatacattt 256  Q
    ||||||||| || |||||||| ||||||||||||||||||    
T  37490630 cacttaaaatcatttttctctctccttcatttatacattt 37490591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 121 - 256
Target Start/End: Complemental strand, 2842161 - 2842025
Alignment:
Q  121 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcac 220  Q
    |||||||||  |||||||| |  ||||||||||   |||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||| | |||    
T  2842161 tttataattataattaatactactttcatcactctaaattcaatatatttcactttgcatttatgatagtggagaatgcatcaatacttgacaataacac 2842062  T
Q  221 ttaa-aacaattttctctatccttcatttatacattt 256  Q
    |||| | || |||||||| ||||||||||||||||||    
T  2842061 ttaacaccatttttctctctccttcatttatacattt 2842025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 254
Target Start/End: Original strand, 33584558 - 33584695
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||||| |  |||||||||| |||||| |||||||| || ||||||||||| ||| |||||||| || ||||||||||||| ||    
T  33584558 ccctttataactataattaatactactttcatcactcccaattcaatatattccattttgcatttatgatactggagaatacaccaatacttaacaatag 33584657  T
Q  218 cacttaaaa-caattttctctatccttcatttatacat 254  Q
    ||||||||| || |||||||| ||||||||||||||||    
T  33584658 cacttaaaaccatttttctctctccttcatttatacat 33584695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 144 - 279
Target Start/End: Original strand, 11616582 - 11616723
Alignment:
Q  144 tttcatcacttccaatttaat-atatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcc 241  Q
    ||||| |||| |||||| ||| ||||| |||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||||| || |||||||| |||    
T  11616582 tttcaccactcccaattcaattatattccactttgcatatatgatagtggagaatgcaccaatacttaacaagagcacttaaaaccatttttctctctcc 11616681  T
Q  242 ttcatttataca----tttaataaatgtgaaatgagcaaatg 279  Q
    ||||||||||||    |||||||  |||||||||||||||||    
T  11616682 ttcatttatacatttttttaatatgtgtgaaatgagcaaatg 11616723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 2846762 - 2846649
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatcct 242  Q
    |||||||| |||||||| |||||||| ||||||| |||||| ||||||||||||  | ||||||||||||| |||||||||||| | |||||||| || |    
T  2846762 tttcatcaattccaattcaatatattccactttgaatttatgatagtggagaatagaccaatacttaacaagagcacttaaaactatttttctctctcgt 2846663  T
Q  243 tcatttatacattt 256  Q
    ||||||||||||||    
T  2846662 tcatttatacattt 2846649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 17266036 - 17266137
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatt 231  Q
    |||||||||| ||||||||||| ||||||  |||||||||||||||||||||| |||||| |||||||| |||||||||| |||| ||||| |||| |||    
T  17266036 aattaatattattttcatcactcccaattcgatatatttcactttgcatttatgatagtgaagaatgcaccaatacttaataaaaacactttaaaccatt 17266135  T
Q  232 tt 233  Q
    ||    
T  17266136 tt 17266137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 47454025 - 47454138
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt-ctctatcct 242  Q
    |||||||| || ||| | ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||  ||||||||||| ||||| |||| ||||    
T  47454025 tttcatcatttacaaatcaatatatttcactttacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaactattttactctctcct 47454124  T
Q  243 tcatttatacattt 256  Q
    ||||||||| ||||    
T  47454125 tcatttatatattt 47454138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 132 - 251
Target Start/End: Original strand, 18235199 - 18235319
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caat 230  Q
    |||||||||| ||||||||| ||||||||| ||||||| |||||| ||||||| ||||||||||||||| |||||||||||||  ||| ||||||  | |    
T  18235199 aattaatattattttcatcatttccaatttcatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagtgcatttaaaattatt 18235298  T
Q  231 tttctctatccttcatttata 251  Q
    ||| ||| |||||||||||||    
T  18235299 tttttctctccttcatttata 18235319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 118 - 256
Target Start/End: Original strand, 36117656 - 36117796
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttat-aatagtggagaatgcatcaatacttaacaaaa 216  Q
    |||||||||| || |||||||||   |||||||| || ||||| |||||||| |||||| ||||||| ||||||||||||||||  ||||||||||||      
T  36117656 ccctttataactttaattaatatcactttcatcattttcaattcaatatattccactttacatttatgaatagtggagaatgcacaaatacttaacaagt 36117755  T
Q  217 gcacttaaaac-aattttctctatccttcatttatacattt 256  Q
    ||||||||||| | |||||||| ||||| ||||||||||||    
T  36117756 gcacttaaaactatttttctctttcctttatttatacattt 36117796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 7425957 - 7425850
Alignment:
Q  151 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatactt-aacaaaagcacttaaaa-caattttctctatccttcattt 248  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||||||| |||||||| ||||| | ||||||||| || |||||||| || |||||||    
T  7425957 acttccaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaaacaagaacacttaaaaccatttttctctctcattcattt 7425858  T
Q  249 atacattt 256  Q
    ||||||||    
T  7425857 atacattt 7425850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 118 - 256
Target Start/End: Original strand, 29257542 - 29257681
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  ||||||||||  |||||||||| |||||| |||||||| |||||||||||||| |||||||| |||  | ||||| ||||||| ||    
T  29257542 ccctttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttatgatagtggaaaatagaccaataattaacaagag 29257641  T
Q  218 cacttaaaa-caattttctctatccttcatttatacattt 256  Q
    ||||||||| || |||| ||| | ||||||||||||||||    
T  29257642 cacttaaaaccatttttttctctgcttcatttatacattt 29257681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 5724793 - 5724681
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatcct 242  Q
    |||| ||| ||| |||| ||||||||||||||| ||||||| |||||||||||||||  |||||||||| || ||||||||||| | |||||||| ||||    
T  5724793 tttcttcatttctaattcaatatatttcactttacatttatgatagtggagaatgcactaatacttaac-aaggcacttaaaactatttttctctctcct 5724695  T
Q  243 tcatttatacattt 256  Q
    ||||||||||||||    
T  5724694 tcatttatacattt 5724681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 30463025 - 30463150
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aat 230  Q
    ||||||||||  |||||||| || ||||| |||||||| || ||| ||||||| || |||||||||||| |||||||||||||  ||||||||||| | |    
T  30463025 aattaatattactttcatcattttcaattcaatatattccattttacatttatgattgtggagaatgcaccaatacttaacaagtgcacttaaaactatt 30463124  T
Q  231 tttctctatccttcatttatacattt 256  Q
    ||||||| || |||||||||||||||    
T  30463125 tttctctctcattcatttatacattt 30463150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 49100613 - 49100476
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 218  Q
    ||||||||| || |||||||  | |||| |||| |||||||| |||||||| |||||| ||||||| ||||||||||||  | |||||||||||||  ||    
T  49100613 cctttataactttaattaattctatttttatcatttccaattcaatatattccactttacatttatgatagtggagaataaaccaatacttaacaagtgc 49100514  T
Q  219 acttaaaacaattttctctatccttcatttatacattt 256  Q
    |||||||  | |||||||| || |||||||||||||||    
T  49100513 acttaaactatttttctctgtctttcatttatacattt 49100476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 118 - 233
Target Start/End: Complemental strand, 29434692 - 29434577
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||||| |  |||||||| |  ||||| |||||||| |||||||||||||| | |||||||||| || ||||||||||||||||    
T  29434692 ccctttataactctaattaatactactttcatcattcacaattcaatatattccactttgcatttatgaaagtggagaatccaccaatacttaacaaaag 29434593  T
Q  218 cacttaaaacaatttt 233  Q
    |||||||||| |||||    
T  29434592 cacttaaaactatttt 29434577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 160 - 256
Target Start/End: Original strand, 23058856 - 23058952
Alignment:
Q  160 ttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcatttatacattt 256  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||| | |||||||||| | |||||||| || |||||||||| ||||    
T  23058856 ttaatatatttcactttgcatttatgatagtggagaatgcaccaatac-taacaagaacacttaaaactatttttctctctctttcatttatatattt 23058952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 46095494 - 46095394
Alignment:
Q  156 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttctctatccttcatttatacatt 255  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||  |||| ||||||| |||||| ||||| ||||| | | ||||| |||||||||||    
T  46095494 caattcaatatatttcactttgcatttatgatagtagagaatgcacaaatatttaacaagagcactcaaaaccattttttttctcctttatttatacatt 46095395  T
Q  256 t 256  Q
    |    
T  46095394 t 46095394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 121 - 256
Target Start/End: Complemental strand, 28923338 - 28923204
Alignment:
Q  121 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcac 220  Q
    |||||||||  |||||||||   ||||||||||  ||||||| ||| || |||||||||||||||||| ||| ||||||| |||||||| |||||| |||    
T  28923338 tttataattataattaatatcactttcatcactctcaatttattatcttccactttgcatttataataatggtgaatgcaccaatacttgacaaaatcac 28923239  T
Q  221 ttaaaacaattttctctatccttcatttatacattt 256  Q
    ||||||| |  || ||| || |||||||||||||||    
T  28923238 ttaaaactacatt-tctctcattcatttatacattt 28923204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 61 - 249
Target Start/End: Complemental strand, 31581608 - 31581423
Alignment:
Q  61 tcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaatt 160  Q
    ||||||||||||||| |  |||||||||||||||||||||||||  |||        || ||||||| |  |||||||| |  |||||||| || |||||    
T  31581608 tcctaaaataactgagtcatttcacttttcaatacaatattaat--tactttttt--ccatttataactctaattaatactactttcatcattttcaatt 31581513  T
Q  161 taatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcattta 249  Q
     |||||||| || ||| ||||||| ||| ||||||||||| |||||||||||||| | ||||||||| | |||| ||| |||||||||||    
T  31581512 caatatattccattttacatttatgatattggagaatgcaccaatacttaacaaatgtacttaaaactatttttatctctccttcattta 31581423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 44604563 - 44604451
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcct 242  Q
    ||||||||||  ||| | |||||||| |||||||| ||||| ||||||||||||  | ||||||||||||| | ||||||||| || |||||||| ||||    
T  44604563 tttcatcactctcaactcaatatattccactttgc-tttatgatagtggagaataaaccaatacttaacaagaacacttaaaatcatttttctctctcct 44604465  T
Q  243 tcatttatacattt 256  Q
    ||||||||||||||    
T  44604464 tcatttatacattt 44604451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 7456676 - 7456598
Alignment:
Q  138 tattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaa 216  Q
    |||| |||||||||||   ||||||||||||| ||||||  |||||| |||||||||||| ||||||||||||||||||    
T  7456676 tattattttcatcactataaatttaatatattccactttatatttatgatagtggagaatacatcaatacttaacaaaa 7456598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 21387566 - 21387496
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 214  Q
    |||||||| || ||||| |||||||| |||||| ||||||| ||||||||||||||| |||||||||||||    
T  21387566 tttcatcattttcaattcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaa 21387496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 23703949 - 23704043
Alignment:
Q  156 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcattta 249  Q
    ||||| ||||||||||| ||| ||||||| ||||||||||||||| ||||| |||||||  || |||||||| | |||||||| |||||||||||    
T  23703949 caattcaatatatttcattttacatttatgatagtggagaatgcagcaataattaacaagtgcgcttaaaactatttttctctctccttcattta 23704043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 34001933 - 34001852
Alignment:
Q  156 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttctct 237  Q
    ||||| |||||||| |||||||||||||| ||| |||| |   |||||||||||||||| |||||||||||| |||||||||    
T  34001933 caattcaatatattccactttgcatttatgataatggataccacatcaatacttaacaagagcacttaaaaccattttctct 34001852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 38181953 - 38181852
Alignment:
Q  151 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcattta 249  Q
    |||||||||| ||||||||  | ||||||||||| |||||||| |||||| ||||||||| ||| | ||||||||| || |||||||| || ||||||||    
T  38181953 acttccaattcaatatattctattttgcatttatgatagtggaaaatgcaccaatacttaccaagaacacttaaaaccatttttctctctctttcattta 38181854  T
Q  250 ta 251  Q
    ||    
T  38181853 ta 38181852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 119 - 257
Target Start/End: Complemental strand, 40038222 - 40038081
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaata---tatttcactttgcatttataatagtggagaatgcatcaatacttaacaaa 215  Q
    ||||||||| |  |||||||| |  |||||||||||| |||||||||   ||||| |||||| |||||| |||||| ||||| || |||||||||||||     
T  40038222 cctttataactctaattaatactactttcatcacttcaaatttaatagtatattttactttgtatttatgatagtgaagaataca-caatacttaacaag 40038124  T
Q  216 agcacttaaaacaatttt-ctctatccttcatttatacattta 257  Q
    | || ||||||  ||||| |||| |||||||||||||||||||    
T  40038123 atcatttaaaattatttttctctttccttcatttatacattta 40038081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 1643417 - 1643346
Alignment:
Q  151 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcactt 222  Q
    |||| |||||||||||||| |||||||||||||| ||  || |||||||| |||||||||| ||||||||||    
T  1643417 actttcaatttaatatattccactttgcatttatgattatgaagaatgcaccaatacttaataaaagcactt 1643346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 33774154 - 33774059
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 214  Q
    |||||||||||  |||||||| |  |||||  |||| ||||| | |||||| |||||||||| ||| |||||||||||| ||||||||||||||||    
T  33774154 cctttataattctaattaatactactttcacaacttacaattcagtatattccactttgcatctatgatagtggagaatacatcaatacttaacaa 33774059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 257
Target Start/End: Original strand, 48981652 - 48981791
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 218  Q
    |||||||||||  |||||| | |  ||| |||| ||||||||||||||||| |||||| ||||||| |||||||| |||  | |||||| ||||||  ||    
T  48981652 cctttataattctaattaacactacttttatcatttccaatttaatatattccactttacatttatgatagtggataatataccaatacataacaagtgc 48981751  T
Q  219 acttaaaac-aattttctctatccttcatttatacattta 257  Q
    | ||||||| | |||||| | | |||||||||||||||||    
T  48981752 atttaaaactatttttctttcttcttcatttatacattta 48981791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 144 - 253
Target Start/End: Original strand, 32776004 - 32776114
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcct 242  Q
    ||||| |||| |||||| ||||||||  ||||| ||||||| |||  | |||||||| |||||||||||||| ||||| |||| || |||||||| ||||    
T  32776004 tttcaccactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaacaaaggcactcaaaaccatttttctctctcct 32776103  T
Q  243 tcatttataca 253  Q
    ||| |||||||    
T  32776104 tcacttataca 32776114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 233
Target Start/End: Complemental strand, 34963923 - 34963805
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtg---gagaatgcatcaatacttaacaa 214  Q
    |||||||||| |  ||||||||||  |||||||| |  ||||| ||||||||||||||| ||||||| ||||||   ||||||||| ||||| |||||||    
T  34963923 ccctttataactctaattaatattactttcatcattctcaattaaatatatttcactttacatttatgatagtgaaagagaatgcaccaatatttaacaa 34963824  T
Q  215 aagcacttaaaacaatttt 233  Q
       |||||||||| |||||    
T  34963823 gttcacttaaaactatttt 34963805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 202 - 307
Target Start/End: Complemental strand, 45890886 - 45890775
Alignment:
Q  202 caatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacat-----ttaataaatgtgaaatgagcaaatgactaagtgaatttagg 295  Q
    |||||||||||||||||| |||||| || |||||||| |||||| |||||||||     ||||||  |||||||||| ||||| ||| ||| |||| |||    
T  45890886 caatacttaacaaaagcatttaaaaccatttttctctctccttcttttatacatttttcttaatacgtgtgaaatgaacaaataactcagttaattcagg 45890787  T
Q  296 actgagggagta 307  Q
    || |||||||||    
T  45890786 acggagggagta 45890775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 46288543 - 46288453
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatact 208  Q
    |||||||||| |  |||||||| |  |||||| |||| ||||| |||||||| ||||||||||| || ||||| |||||||||| ||||||    
T  46288543 ccctttataactctaattaatactactttcataactttcaattcaatatattccactttgcattaatgatagtcgagaatgcattaatact 46288453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 16870853 - 16870788
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatactt 209  Q
    ||||||||||||||| | | ||||||||||||||||||||| ||| ||  ||||| ||||||||||    
T  16870853 tttcatcacttccaactcactatatttcactttgcatttatgataatgatgaatgtatcaatactt 16870788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 25778765 - 25778805
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttat 184  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  25778765 tttcatcacttccaattcaatatattttactttgcatttat 25778805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 37157112 - 37157156
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    ||||||||||||||||  | |||||||||||||||||||||||||    
T  37157112 gtcctaaaataactgagctatttcacttttcaatacaatattaat 37157156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 37157179 - 37157259
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtgg-agaatgcatcaatacttaa 211  Q
    |||||||| | ||||||||| || ||||||||||||||  ||||| ||||||| ||||||| | |||||| ||||||||||    
T  37157179 aattaatacttttttcatcattttcaatttaatatattctactttacatttatgatagtggaaaaatgcaccaatacttaa 37157259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 5083512 - 5083445
Alignment:
Q  190 tggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcatttatacattt 256  Q
    ||||| ||||| ||||||||||||| |||||||||||| | |||| ||| ||||| ||||||||||||    
T  5083512 tggagtatgcaccaatacttaacaagagcacttaaaactatttttatctttcctttatttatacattt 5083445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 22618070 - 22618007
Alignment:
Q  194 gaatgcatcaatacttaacaaaagcacttaaaacaatttt-ctctatccttcatttatacattt 256  Q
    ||||| ||||||||||||||||| |||||||||| ||||| |||| || |||| ||||||||||    
T  22618070 gaatgtatcaatacttaacaaaaacacttaaaacgattttcctctttctttcacttatacattt 22618007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 214
Target Start/End: Original strand, 28333180 - 28333262
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 214  Q
    ||||||||||  |||||||||| |||||| ||||||||  ||||| ||||||| |||    | ||||||||||||||||||||    
T  28333180 aattaatattactttcatcactcccaattcaatatattctactttacatttatgataagaaataatgcatcaatacttaacaa 28333262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 40803701 - 40803600
Alignment:
Q  155 ccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttctctatccttcatttatacat 254  Q
    |||||| |||||| |||| ||| ||||||| |||||||||||  || ||||| |||||||   |||| |||  | |||||||| ||||||||||||| ||    
T  40803701 ccaattcaatataattcattttacatttatgatagtggagaaaacaccaatatttaacaagtacactaaaattatttttctctctccttcatttataaat 40803602  T
Q  255 tt 256  Q
    ||    
T  40803601 tt 40803600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 5083518 - 5083550
Alignment:
Q  162 aatatatttcactttgcatttataatagtggag 194  Q
    ||||||||||||||||||||||| |||||||||    
T  5083518 aatatatttcactttgcatttatgatagtggag 5083550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 28923389 - 28923349
Alignment:
Q  64 taaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||||| || ||||| |||||||||||||||||||    
T  28923389 taaaataactgacttatttcatttttcaatacaatattaat 28923349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 37491068 - 37491028
Alignment:
Q  64 taaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||||| || ||| |||||||||||||||||||||    
T  37491068 taaaataactgagttattttacttttcaatacaatattaat 37491028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 48981320 - 48981364
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||| ||||||||||| |  |||||||||||||||||||||||||    
T  48981320 gtcccaaaataactgagtcatttcacttttcaatacaatattaat 48981364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 3e-37; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 5962585 - 5962446
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  ||||||||||  |||||||||| |||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  5962585 ccctttataactctaattaatattaatttcatcactcccaattcaatatattccactttgcatttataatagtggagaatgcaccaatacttaacaaaag 5962486  T
Q  218 cacttaaaac-aattttctctatccttcatttatacattt 256  Q
    ||||||||||   |||||| | ||||||||||||||||||    
T  5962485 cacttaaaacgttttttctatctccttcatttatacattt 5962446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 65 - 279
Target Start/End: Original strand, 5391994 - 5392211
Alignment:
Q  65 aaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaatttaat 164  Q
    ||||||||||| |  |||||||||||||||||||||||||  |||        |||||||||| |  |||||||| |  ||||| |||| |||||| |||    
T  5391994 aaaataactgagtcatttcacttttcaatacaatattaat--tacttttttt-ccctttataactctaattaatactactttcaacactcccaattcaat 5392090  T
Q  165 atatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt-ctctatccttcatttatacattt-----aa 258  Q
    ||||| |||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||| ||||| |||| ||||||||||||||||||     ||    
T  5392091 atattccactttgcatttatgatagtggagaatgcaccaatacttgacaaaagcacttaaaaccatttttctctctccttcatttatacatttgtcttaa 5392190  T
Q  259 taaatgtgaaatgagcaaatg 279  Q
    ||  |||||||||||||||||    
T  5392191 taggtgtgaaatgagcaaatg 5392211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 132 - 254
Target Start/End: Original strand, 45425494 - 45425617
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatt 231  Q
    ||||||||||  |||||||| | | ||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| |||    
T  45425494 aattaatattactttcatcattcctaatttaatatattccactttgcatttatgatagtggaaaatgcatcaatacttaacaagagcacttaaaaccatt 45425593  T
Q  232 t-tctctatccttcatttatacat 254  Q
    | ||||| ||||||||||||||||    
T  45425594 tgtctctctccttcatttatacat 45425617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 61 - 256
Target Start/End: Complemental strand, 32241589 - 32241397
Alignment:
Q  61 tcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaatt 160  Q
    ||||||||||| ||| || |||||||||||||||||||||||||  |||        |||||||||| |  ||||||||||  |||||  ||||||||||    
T  32241589 tcctaaaataaatgagttatttcacttttcaatacaatattaat--tactttttt--ccctttataactctaattaatattactttcacaacttccaatt 32241494  T
Q  161 taatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacattt 256  Q
     | |||||| |||||||||||||| |||||| |||||||||||||||||||||| | ||||||||| || |||| ||| ||||||||||||||||||    
T  32241493 cattatattccactttgcatttatgatagtgaagaatgcatcaatacttaacaagaacacttaaaatcatttttatctctccttcatttatacattt 32241397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 118 - 256
Target Start/End: Original strand, 28802762 - 28802901
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||||| | |||||||||||  ||||| |||||||| |||||||||||||| ||||||||||||  ||||||||||||||| ||    
T  28802762 ccctttataactctaattaataatattttcatcactctcaattcaatatattccactttgcatttatgatagtggagaatagatcaatacttaacaagag 28802861  T
Q  218 cacttaaaa-caattttctctatccttcatttatacattt 256  Q
    ||||||||| || |||||||| || |||||||||||||||    
T  28802862 cacttaaaaccatttttctctctctttcatttatacattt 28802901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 39171552 - 39171677
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caat 230  Q
    |||||||| | |||||||||||  ||||| |||||||| |||||||||||||| ||||| || ||||||||||||||||||||||| |||||||| || |    
T  39171552 aattaatactattttcatcactcacaattcaatatattccactttgcatttatgatagtagataatgcatcaatacttaacaaaagtacttaaaaccatt 39171651  T
Q  231 tttctctatccttcatttatacattt 256  Q
    ||||||| ||||||||||||| ||||    
T  39171652 tttctctctccttcatttatatattt 39171677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 165 - 256
Target Start/End: Original strand, 9014745 - 9014837
Alignment:
Q  165 atatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacattt 256  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||| | ||||||||||| ||||    
T  9014745 atattccactttgcatttatgatagtggagaatgcatcaatacttaacaaaagcacttaaaatcatttttctctcttcttcatttatatattt 9014837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 2349359 - 2349485
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaa-- 229  Q
    ||||||||||  ||||| || |||||||| |||||||| || ||| ||||||| |||||||||||||||  ||||||||||||| ||||||||||| |      
T  2349359 aattaatattactttcaacatttccaattcaatatattccaatttacatttatgatagtggagaatgcacaaatacttaacaaatgcacttaaaactatt 2349458  T
Q  230 ttttctctatccttcatttatacattt 256  Q
    |||||||| ||||||||||||||||||    
T  2349459 ttttctctctccttcatttatacattt 2349485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 118 - 233
Target Start/End: Complemental strand, 44615477 - 44615362
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||||||| |||||||||||  ||||| ||||||||  |||||||||||||||||||||||||| || |||||||||||||||     
T  44615477 ccctttataactctaattaatattattttcatcactctcaattcaatatattctactttgcatttataatagtggagaattcaccaatacttaacaaaaa 44615378  T
Q  218 cacttaaaacaatttt 233  Q
    ||||| ||||| ||||    
T  44615377 cacttcaaacattttt 44615362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 44790534 - 44790395
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||||| |  ||||| || | |||||| |||||||| |||||| ||||||| ||||||||||||||| |||||||||||||  |    
T  44790534 ccctttataactctaattaatactactttcaccattcccaattcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagtg 44790435  T
Q  218 cacttaaaac-aattttctctatccttcatttatacattt 256  Q
    |||||||||| | |||||||| ||||||||||||||||||    
T  44790434 cacttaaaactatttttctctctccttcatttatacattt 44790395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 21587298 - 21587403
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttctctatcctt 243  Q
    |||||||||| |||||| |||||||| |||||||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||    |||||| |||||    
T  21587298 tttcatcactcccaattcaatatattccactttgcatttctaacagtggagaatgcaccaatacttaacaagagcacttaaaac---cttctctctcctt 21587394  T
Q  244 catttatac 252  Q
    |||||||||    
T  21587395 catttatac 21587403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 33190988 - 33190882
Alignment:
Q  151 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcattta 249  Q
    |||||||||| |||||||| |||| ||||||||| |||||||||||||||| |||||||||||| | ||||||||| || |||||||| | |||||||||    
T  33190988 acttccaattcaatatattccactatgcatttatgatagtggagaatgcattaatacttaacaagaacacttaaaatcatttttctctcttcttcattta 33190889  T
Q  250 tacattt 256  Q
    |||||||    
T  33190888 tacattt 33190882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 133 - 256
Target Start/End: Original strand, 12653697 - 12653821
Alignment:
Q  133 attaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aatt 231  Q
    |||||||||  |||||||| |  ||||| |||||||| |||||| |||||||||||||||| |||||| ||||| |||||||| ||||||||||| | ||    
T  12653697 attaatattactttcatcattctcaattcaatatattccactttacatttataatagtggataatgcaccaatatttaacaaacgcacttaaaactattt 12653796  T
Q  232 ttctctatccttcatttatacattt 256  Q
    |||||| | ||||||||||||||||    
T  12653797 ttctctctacttcatttatacattt 12653821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 38252524 - 38252410
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaa--ttttctctatcc 241  Q
    |||||||| |||||||| |||||||| |||||| ||||||| | |||||||||||||  ||||||||||||  ||||||||||| |  |||||||| |||    
T  38252524 tttcatcatttccaattcaatatattccactttacatttatgacagtggagaatgcactaatacttaacaagtgcacttaaaactattttttctctctcc 38252425  T
Q  242 ttcatttatacattt 256  Q
    |||||||||||||||    
T  38252424 ttcatttatacattt 38252410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 29730985 - 29730869
Alignment:
Q  143 ttttcatcacttccaatttaatatat-ttc-actttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctat 239  Q
    ||||||| | |||||||| ||||||| ||| ||||||||||||| ||||||||||||||| ||||||||||||| | ||||||||| || |||||||| |    
T  29730985 ttttcatgagttccaattcaatatatattctactttgcatttatgatagtggagaatgcaccaatacttaacaagaacacttaaaaccacttttctctct 29730886  T
Q  240 ccttcatttatacattt 256  Q
    |||||||||||| ||||    
T  29730885 ccttcatttatatattt 29730869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 45197632 - 45197744
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttctctatcctt 243  Q
    ||||||||||  ||||| ||||||||||| ||| ||||||| | |||| |||||||||||||||||||||||| |||||||||  ||||| ||| || ||    
T  45197632 tttcatcactctcaattcaatatatttcattttacatttatgacagtgaagaatgcatcaatacttaacaaaaacacttaaaatcattttttctctcatt 45197731  T
Q  244 catttatacattt 256  Q
    |||||||| ||||    
T  45197732 catttatatattt 45197744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 121 - 251
Target Start/End: Original strand, 34133125 - 34133256
Alignment:
Q  121 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcac 220  Q
    ||||||| | |||||||||||  ||||||||  ||||||| ||||||||||| ||| ||||||| ||||||||||||||  |||||||||||||  ||||    
T  34133125 tttataactccaattaatattactttcatcatatccaattcaatatatttcattttacatttatgatagtggagaatgcgccaatacttaacaagtgcac 34133224  T
Q  221 ttaaaa-caattttctctatccttcatttata 251  Q
    ||||||  | |||||||| ||||| |||||||    
T  34133225 ttaaaattatttttctctctcctttatttata 34133256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 132 - 256
Target Start/End: Complemental strand, 4274397 - 4274272
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caat 230  Q
    |||||||||| |||||| ||||  ||||| ||||||||||||||||||||||| |||| |||||||  | | ||| ||||| |||||||||||||  | |    
T  4274397 aattaatattattttcaccactctcaattcaatatatttcactttgcatttatgataggggagaatagaccgatatttaacgaaagcacttaaaattatt 4274298  T
Q  231 tttctctatccttcatttatacattt 256  Q
    ||||||| | ||||||||||||||||    
T  4274297 tttctctcttcttcatttatacattt 4274272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 42412469 - 42412356
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatcct 242  Q
    |||||||||| |||||| |||||||| |||||||||||||| ||| ||||||||||| |||||  | |||| |||||||||||| | |||||||| || |    
T  42412469 tttcatcactcccaattcaatatattccactttgcatttatgataatggagaatgcaccaatatatgacaagagcacttaaaactatttttctctctcat 42412370  T
Q  243 tcatttatacattt 256  Q
    ||| ||||||||||    
T  42412369 tcacttatacattt 42412356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 7042761 - 7042855
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatactt-aacaaaagcacttaaa 225  Q
    |||||||| | ||||||||||||||||||| ||||||| |||||| ||||||| ||| | ||||||||| |||||||| ||||| ||||||||||    
T  7042761 aattaatactattttcatcacttccaattttatatattccactttacatttatgataatagagaatgcaccaatacttaaacaagagcacttaaa 7042855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 42558667 - 42558556
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttctctatcctt 243  Q
    ||||||||||   |||| |||||||| |||||||||||||| ||||||||||||  | ||||||||||||| | || ||||||| | ||| ||| |||||    
T  42558667 tttcatcactcttaattcaatatattccactttgcatttatgatagtggagaataaaccaatacttaacaagaacaattaaaacca-tttatctctcctt 42558569  T
Q  244 catttatacattt 256  Q
    |||||||||||||    
T  42558568 catttatacattt 42558556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 256
Target Start/End: Original strand, 29615793 - 29615932
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| || |||||||| |  |||||||| | |||||| |||||||| |||||| ||||||| | |||||| | | || |||||||||||||  |    
T  29615793 ccctttataactttaattaatactactttcatcattcccaattcaatatattccactttacatttatgacagtggaaagtacaccaatacttaacaagtg 29615892  T
Q  218 cacttaaaa-caattttctctatccttcatttatacattt 256  Q
    || ||||||  | |||||||| ||||||||||||||||||    
T  29615893 catttaaaattatttttctctctccttcatttatacattt 29615932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 257
Target Start/End: Original strand, 31132758 - 31132865
Alignment:
Q  151 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcattta 249  Q
    |||| ||||| | |||||| || ||||||||||| ||| ||||||||  | ||||||||||||| ||||||||||| || ||||||||||||||| | ||    
T  31132758 actttcaattgattatattccattttgcatttatgatactggagaatataccaatacttaacaagagcacttaaaatcatttttctctatccttcgtcta 31132857  T
Q  250 tacattta 257  Q
    ||||||||    
T  31132858 tacattta 31132865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 22325042 - 22324928
Alignment:
Q  143 ttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt-ctctatcc 241  Q
    ||||||||| || ||||| |||||||| |||||| ||||||| |||||||| ||||||  |||| |||||||   |||||||||  ||||| |||| |||    
T  22325042 ttttcatcattttcaattcaatatattccactttacatttatgatagtggaaaatgcactaatatttaacaagtacacttaaaattatttttctctctcc 22324943  T
Q  242 ttcatttatacattt 256  Q
    |||||||||||||||    
T  22324942 ttcatttatacattt 22324928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 157 - 250
Target Start/End: Complemental strand, 31410681 - 31410587
Alignment:
Q  157 aatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcatttat 250  Q
    |||| |||||||| |||||||||||||| |||||| | |||||| ||||| ||||||||| ||||||||||   |||||||| ||||||||||||    
T  31410681 aattcaatatattccactttgcatttatgatagtgtataatgcaccaatatttaacaaaaacacttaaaactgtttttctctctccttcatttat 31410587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 32967388 - 32967250
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 218  Q
    ||||||||| |  |||||||| |  |||||||| |  ||||| |||||||| ||||||  |||||| ||||||||||||| | |||||||||| ||  ||    
T  32967388 cctttataactctaattaatactactttcatcattctcaattcaatatattccactttaaatttatgatagtggagaatggaccaatacttaagaagtgc 32967289  T
Q  219 acttaaaac-aattttctctatccttcatttatacattt 256  Q
    ||||||||| | |||||||| | ||||||||||||||||    
T  32967288 acttaaaactatttttctctcttcttcatttatacattt 32967250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 4480528 - 4480412
Alignment:
Q  171 cactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttctctatccttcatttatacat-----ttaataaatgt 265  Q
    |||||||  ||||| ||| ||||||||||| |||||| ||||||||| | |||||| | |||||||| || |||||||||||||     |||||| ||||    
T  4480528 cactttgtgtttatgatactggagaatgcaccaatacataacaaaagtatttaaaatatttttctctctctttcatttatacatttttcttaatatatgt 4480429  T
Q  266 gaaatgagcaaatgact 282  Q
     ||||||||||||||||    
T  4480428 taaatgagcaaatgact 4480412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 163 - 256
Target Start/End: Complemental strand, 13085015 - 13084921
Alignment:
Q  163 atatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcatttatacattt 256  Q
    ||||||| |||||||||||||| || || ||||||||| ||||| ||||||| | |||||||||| | |||| ||| ||||||||||| ||||||    
T  13085015 atatattccactttgcatttatgattgtagagaatgcaccaataattaacaagaacacttaaaactatttttgtctctccttcatttacacattt 13084921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 164 - 256
Target Start/End: Original strand, 139063 - 139156
Alignment:
Q  164 tatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacattt 256  Q
    |||||| |||||||||||||| |||| ||| |||||| ||||||||||||| || | |||||| || |||| ||| || |||||||||||||||    
T  139063 tatattccactttgcatttatgatagcggaaaatgcaccaatacttaacaagagaatttaaaatcatttttatctctcattcatttatacattt 139156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 138785 - 138674
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttctctatcctt 243  Q
    |||||||| | | |||| |||||||| |||||||||||||| ||||  || ||| || |||||| |||||||| |||||||||  ||||| ||| | |||    
T  138785 tttcatcattactaattcaatatattccactttgcatttatgatagaagaaaatccaccaatacataacaaaaacacttaaaatcatttt-tctcttctt 138687  T
Q  244 catttatacattt 256  Q
    |||||||||||||    
T  138686 catttatacattt 138674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 37219843 - 37219734
Alignment:
Q  151 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagca---cttaaaacaat-tttctctatccttcat 246  Q
    |||| |||||||||||||||||||||  |||||| |||  |||||||||| | ||||||||||| | ||   |||||||  || ||||||| ||||||||    
T  37219843 actttcaatttaatatatttcactttatatttatgataagggagaatgcacccatacttaacaacaacaacacttaaaatcatatttctctctccttcat 37219744  T
Q  247 ttatacattt 256  Q
    ||||||||||    
T  37219743 ttatacattt 37219734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 256
Target Start/End: Original strand, 3384546 - 3384670
Alignment:
Q  135 taatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattt-- 232  Q
    |||||||  ||||||||||| ||||| ||||||||  ||||||||||||| |||||| |||||  | |||||| |||||| || | |||| || ||||      
T  3384546 taatattactttcatcactttcaattcaatatattcaactttgcatttatgatagtgaagaatataccaatacataacaagagtatttaataccattttt 3384645  T
Q  233 -tctctatccttcatttatacattt 256  Q
     ||||| | ||||||||||||||||    
T  3384646 ctctctcttcttcatttatacattt 3384670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 166 - 256
Target Start/End: Original strand, 886652 - 886746
Alignment:
Q  166 tatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaat----tttctctatccttcatttatacattt 256  Q
    ||||||||| ||||||||||| |||||||||||||  |||||||||||| | |  ||||||| ||    | ||||| ||||||||||||||||||    
T  886652 tatttcactctgcatttataacagtggagaatgcacaaatacttaacaagaacgtttaaaaccattctctctctctctccttcatttatacattt 886746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 7258453 - 7258340
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcct 242  Q
    |||||||||| |||||| ||||||||  | ||||||||||| ||| ||   |||||| |||||||| |||| ||| ||||||| || |||||||| ||||    
T  7258453 tttcatcactcccaattcaatatattctagtttgcatttatgataatgataaatgcaccaatacttgacaagagcgcttaaaaccatttttctctttcct 7258354  T
Q  243 tcatttatacattt 256  Q
    ||||| ||| ||||    
T  7258353 tcattaatatattt 7258340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 8618127 - 8618232
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 221  Q
    |||||| || |||||||| | |||| | ||||||||||| ||||||||  | ||| ||||||| |||  | | |||||| ||||||||||||||| ||||    
T  8618127 ttataactttaattaatactatttttaccacttccaattcaatatattatattttacatttatgataaagaataatgcaccaatacttaacaaaaacact 8618226  T
Q  222 taaaac 227  Q
    ||||||    
T  8618227 taaaac 8618232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 210
Target Start/End: Complemental strand, 1230470 - 1230383
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatactta 210  Q
    |||||| || |||||||||| ||| |||||||  ||||| ||||||||  ||||||||||||| ||| |||| |||||| |||||||||    
T  1230470 ttataactttaattaatattatttccatcactctcaattcaatatattctactttgcatttatgataatgga-aatgcaccaatactta 1230383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 27973761 - 27973633
Alignment:
Q  155 ccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttataca 253  Q
    |||||| ||| ||||  ||||||||||||| ||| |||  |||| |||||||||| |||| | ||||||||| || ||||||| |||||||| | |||||    
T  27973761 ccaattcaatgtattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccatttttctccatccttcactaataca 27973662  T
Q  254 t-----ttaataaatgtgaaatgagcaaa 277  Q
    |     ||||||| |||||||||||||||    
T  27973661 tttttcttaataagtgtgaaatgagcaaa 27973633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 277
Target Start/End: Complemental strand, 28031030 - 28030902
Alignment:
Q  155 ccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttataca 253  Q
    |||||| ||| ||||  ||||||||||||| ||| |||  |||| |||||||||| |||| | ||||||||| || ||||||| |||||||| | |||||    
T  28031030 ccaattcaatgtattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccatttttctccatccttcactaataca 28030931  T
Q  254 t-----ttaataaatgtgaaatgagcaaa 277  Q
    |     ||||||| |||||||||||||||    
T  28030930 tttttcttaataagtgtgaaatgagcaaa 28030902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 33826177 - 33826220
Alignment:
Q  61 tcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    ||||||||||| ||| || |||||||||||||||||||||||||    
T  33826177 tcctaaaataattgacttatttcacttttcaatacaatattaat 33826220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 2195489 - 2195559
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 214  Q
    |||||||||| |||||| ||||||||  ||||||||||||| |||    |||||||| |||||||||||||    
T  2195489 tttcatcactcccaattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaacaa 2195559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 15559216 - 15559103
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcct 242  Q
    |||||||||| | |||| ||||||||  ||||||||||||| ||| |||  ||| || |||||||| |||| | ||||||||| || |||| ||| ||||    
T  15559216 tttcatcactcctaattcaatatattctactttgcatttatgataatggtaaatacaccaatacttgacaagaacacttaaaatcatttttgtctctcct 15559117  T
Q  243 tcatttatacattt 256  Q
    ||| | ||||||||    
T  15559116 tcactaatacattt 15559103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 277
Target Start/End: Complemental strand, 27868433 - 27868272
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 221  Q
    ||||||||| |||||||| |  |||||||| |  ||||| ||||||||  ||||||||||||| ||| ||   |||| |||||||||| |||| | |||     
T  27868433 ttataattttaattaatactactttcatcattctcaattcaatatattctactttgcatttatgataatgataaatggatcaatacttgacaagaacacg 27868334  T
Q  222 taaaa-caattttctctatccttcatttatacat-----ttaataaatgtgaaatgagcaaa 277  Q
    ||||| || ||||||| ||| |||| | ||||||     ||||||| |||||||||||||||    
T  27868333 taaaaccatttttctccatcattcactaatacatttttcttaataagtgtgaaatgagcaaa 27868272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 26570321 - 26570281
Alignment:
Q  64 taaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||||| |  |||||||||||||||||||||||||    
T  26570321 taaaataactgattcatttcacttttcaatacaatattaat 26570281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 163 - 256
Target Start/End: Original strand, 26677113 - 26677208
Alignment:
Q  163 atatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaa--ttttctctatccttcatttatacattt 256  Q
    |||||||  ||||||||||||| ||| ||| ||||||| ||||| || ||||   ||||||||||||  |||||||| || |||| ||||||||||    
T  26677113 atatattctactttgcatttatgataatggtgaatgcaccaatattttacaatgacacttaaaacaaatttttctctctctttcacttatacattt 26677208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 29731030 - 29730990
Alignment:
Q  64 taaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||||| |  |||||||||||||||||||||||||    
T  29731030 taaaataactgagtcatttcacttttcaatacaatattaat 29730990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 33191075 - 33191031
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||| ||||||||||| |  |||||||||||||||||||||||||    
T  33191075 gtcccaaaataactgagtcatttcacttttcaatacaatattaat 33191031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 34287190 - 34287126
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcattta 183  Q
    |||||||||||  ||||||||||  |||||||| ||| |||| |||||||| |||||| ||||||    
T  34287190 cctttataattctaattaatattactttcatcatttctaattcaatatattccactttacattta 34287126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 8e-35; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 18849871 - 18849732
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  ||||||||||  |||||  |||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||    
T  18849871 ccctttataactctaattaatattactttcacaacttccaattcaatatatttcactttgcatttatgatagtggagaatgcaccaatacttaacaagag 18849772  T
Q  218 cacttaaaacaat-tttctctatccttcatttatacattt 256  Q
    |||||||||| || ||||| | ||||||||||||||||||    
T  18849771 cacttaaaaccatatttctttctccttcatttatacattt 18849732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 42024313 - 42024174
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||||| |  ||||||||||||||||| |||||||| |||||||||||||||||||||||||||  | ||||||||||||| ||    
T  42024313 ccctttataactataattaatactactttcatcacttccaattcaatatattccactttgcatttataatagtggagaatagaccaatacttaacaagag 42024214  T
Q  218 cacttaaaa-caattttctctatccttcatttatacattt 256  Q
     | |||||| || |||||||| ||||||||||||||||||    
T  42024213 tagttaaaaccatttttctctctccttcatttatacattt 42024174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 120 - 256
Target Start/End: Complemental strand, 14009744 - 14009607
Alignment:
Q  120 ctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagca 219  Q
    |||||||| || ||||| |||||  |||||||||  ||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||      
T  14009744 ctttataactttaattagtattgcgttcatcactctcaattcaatatatttcattttgcatttataatagtggagaatacatcaatacttaacaaaagtt 14009645  T
Q  220 cttaaaa-caattttctctatccttcatttatacattt 256  Q
    |  |||| || |||||||| ||||||||||||||||||    
T  14009644 cacaaaaccacttttctctctccttcatttatacattt 14009607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 283563 - 283454
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaa-ttttctctatcct 242  Q
    |||||||||| ||||||  ||||||| ||||||| |||| |||||||||||||||||  |||||||||||| |||||||||||||| |||||||| ||||    
T  283563 tttcatcactcccaattctatatattccactttgaatttctaatagtggagaatgcacaaatacttaacaagagcacttaaaacaatttttctctctcct 283464  T
Q  243 tcatttatac 252  Q
    ||||||||||    
T  283463 tcatttatac 283454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 3686006 - 3686115
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  ||||||||||  ||||||||||  ||||| ||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||    
T  3686006 ccctttataactctaattaatattactttcatcactctcaattcaatatattcaactttgcatttataatagtggagaatgcaccaatacttaacaaaag 3686105  T
Q  218 cacttaaaac 227  Q
     |||||||||    
T  3686106 tacttaaaac 3686115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 64 - 256
Target Start/End: Original strand, 39979725 - 39979914
Alignment:
Q  64 taaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaatttaa 163  Q
    |||||||| ||| || |||||||||||||||||||||||||  |||        |||||||||| |  ||||||||||  |||||||| |||||||| ||    
T  39979725 taaaataattgagttatttcacttttcaatacaatattaat--tactttttc--ccctttataactctaattaatattactttcatcatttccaattcaa 39979820  T
Q  164 tatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcatttatacattt 256  Q
    |||||| |||||| ||||||| ||||||||||||||| | |||||||||||  ||||||||||| | |||||| | | ||||||||||||||||    
T  39979821 tatattccactttacatttatgatagtggagaatgcaccgatacttaacaagtgcacttaaaactatttttctttctacttcatttatacattt 39979914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 27977168 - 27977250
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa 226  Q
    ||||||||||  ||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  27977168 tttcatcactctcaattcaatatattccactttgcatttataatagtggagaatgcaccaatacttaacaaaaacacttaaaa 27977250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 156 - 252
Target Start/End: Complemental strand, 4360482 - 4360385
Alignment:
Q  156 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatac 252  Q
    ||||| |||||||| ||||||||||||||  |||||||||||||| ||||||||||||||||||||||||| || |||||||| || |||||||||||    
T  4360482 caattcaatatattccactttgcatttatgctagtggagaatgcaccaatacttaacaaaagcacttaaaaccatttttctctttcattcatttatac 4360385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 132 - 256
Target Start/End: Complemental strand, 38160250 - 38160125
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaa-t 230  Q
    ||||||||||  ||| ||||||  ||||| |||||||||||||||| |||||| ||| ||||||||||||||||| || |||||  |||||||||||| |    
T  38160250 aattaatattacttttatcactctcaattcaatatatttcactttgtatttatgataatggagaatgcatcaatatttgacaaagacacttaaaacaatt 38160151  T
Q  231 tttctctatccttcatttatacattt 256  Q
    ||||||| ||||| ||||||||||||    
T  38160150 tttctctctcctttatttatacattt 38160125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 132 - 307
Target Start/End: Complemental strand, 22872486 - 22872303
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaa--agcacttaaaacaa 229  Q
    ||||||||||  ||||||||||  ||||| |||||||| |||||||||||||| ||| ||||||||||| |||||||| |||||  |||||||||||| |    
T  22872486 aattaatattactttcatcactctcaattcaatatattccactttgcatttatgataatggagaatgcaccaatacttgacaaacgagcacttaaaacca 22872387  T
Q  230 tttt-ctctatccttcatttatacattt-----aataaatgtgaaatgagcaaatgactaagtgaatttaggactgagggagta 307  Q
    |||| |||| | ||||| ||||||||||     ||||  ||||||||||||||||| || | | ||||| |||| |||||||||    
T  22872386 tttttctctcttcttcacttatacatttttcttaatatgtgtgaaatgagcaaatggctcacttaatttgggacggagggagta 22872303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 65 - 256
Target Start/End: Complemental strand, 54729644 - 54729457
Alignment:
Q  65 aaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaatttaat 164  Q
    |||||||||||||  ||||||||| |||||||||||||||  |||        |||||||||| |  |||||||| |  ||||||||| || |||| |||    
T  54729644 aaaataactgaatcatttcactttccaatacaatattaat--tactttttt--ccctttataactctaattaatactactttcatcacctc-aattcaat 54729550  T
Q  165 atatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcatttatacattt 256  Q
    ||||| |||||||||||||| |||||||||||| ||  |||||||||||||| |||||||||| | |||||||| || |||||||||||||||    
T  54729549 atattccactttgcatttatgatagtggagaatacactaatacttaacaaaaacacttaaaactatttttctctctctttcatttatacattt 54729457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 33047515 - 33047602
Alignment:
Q  146 tcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt 233  Q
    ||||||||||||||| |||||||| ||||||| |||||| ||||||||||||  | |||||||||||||||||||||||||| |||||    
T  33047515 tcatcacttccaattcaatatattccactttgtatttatgatagtggagaatctaccaatacttaacaaaagcacttaaaaccatttt 33047602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 41710256 - 41710117
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  ||||||||||  |||||||||| |||||| |||||||| |||||||||||||| |||||||| |||  | ||||| ||||||| ||    
T  41710256 ccctttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttatgatagtggaaaatagaccaataattaacaagag 41710157  T
Q  218 cacttaaaa-caattttctctatccttcatttatacattt 256  Q
    ||||||||| || |||| ||| | ||||||||||||||||    
T  41710156 cacttaaaaccatttttttctctgcttcatttatacattt 41710117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 39976476 - 39976371
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttctctatcctt 243  Q
    ||||||||||  ||||| |||||||| |||||||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||    |||||| |||||    
T  39976476 tttcatcactctcaattcaatatattccactttgcatttctaacagtggagaatgcaccaatacttaacaagagcacttaaaac---cttctctctcctt 39976380  T
Q  244 catttatac 252  Q
    |||||||||    
T  39976379 catttatac 39976371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 49306583 - 49306721
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 218  Q
    ||||||||| |  |||||||| |  |||||||||| | |||| |||||||| |||||||||||||| |||| |||||||  | ||||||||||||| |||    
T  49306583 cctttataactctaattaatactactttcatcactcctaattcaatatattccactttgcatttatgataggggagaatagaccaatacttaacaagagc 49306682  T
Q  219 acttaaaa-caattttctctatccttcatttatacattt 256  Q
    |||||||| || |||||||| || |||||||||||||||    
T  49306683 acttaaaaccatttttctctctctttcatttatacattt 49306721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 148 - 256
Target Start/End: Original strand, 41203762 - 41203871
Alignment:
Q  148 atcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcat 246  Q
    ||||||| ||||| |||||||| ||||||| ||||||  ||||| |||||||||||||||||||||| |||||| |||| || |||||| | ||||||||    
T  41203762 atcactttcaattcaatatattccactttgtatttatggtagtgaagaatgcatcaatacttaacaagagcactaaaaaccatttttctatctccttcat 41203861  T
Q  247 ttatacattt 256  Q
    ||||||||||    
T  41203862 ttatacattt 41203871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 144 - 282
Target Start/End: Original strand, 17237064 - 17237208
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatcct 242  Q
    ||||||| ||| ||||| |||||||| |||||||||||||| |||||  ||||| ||  |||||||||||||| |||||||||| | |||||||| ||||    
T  17237064 tttcatcgctttcaattcaatatattccactttgcatttatgatagtaaagaatccactaatacttaacaaaatcacttaaaactatttttctctctcct 17237163  T
Q  243 tcatttatacat-----ttaataaatgtgaaatgagcaaatgact 282  Q
    ||||||||| ||     ||||||  ||||||||||||||||||||    
T  17237164 tcatttatatatttttcttaataggtgtgaaatgagcaaatgact 17237208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 37309694 - 37309789
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 214  Q
    ||||||||| |  ||||||||||  ||||||||||  ||||| ||||||||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  37309694 cctttataactctaattaatattactttcatcactctcaattcaatatatttaactttgcatttatgatagtagagaatgcatcaatacttaacaa 37309789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 8295061 - 8295163
Alignment:
Q  155 ccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaa-ttttctctatccttcatttataca 253  Q
    |||||| ||||||||  || |||||||||| ||||||||||||||| ||||||||| ||| || ||||||||||| |||||||| || ||||||||||||    
T  8295061 ccaattcaatatattatacattgcatttatgatagtggagaatgcaccaatacttatcaagaggacttaaaacaatttttctctctctttcatttataca 8295160  T
Q  254 ttt 256  Q
    |||    
T  8295161 ttt 8295163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 42185882 - 42185769
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcct 242  Q
    ||||||||||  ||||| |||||||||||| ||| |||||| |||||||| |||  | ||||||||||||| ||||||||||| || |||||| | ||||    
T  42185882 tttcatcactctcaattcaatatatttcaccttgtatttatgatagtggataatagaccaatacttaacaagagcacttaaaatcatttttctatctcct 42185783  T
Q  243 tcatttatacattt 256  Q
    ||||||||||||||    
T  42185782 tcatttatacattt 42185769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 9093839 - 9093759
Alignment:
Q  153 ttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt 233  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||||||  ||||||||||||  ||||||||||| |||||    
T  9093839 ttccaatttaatatattccactttacatttatgatagtggagaatgcacaaatacttaacaagtgcacttaaaactatttt 9093759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 30568668 - 30568797
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtgga----gaatgcatcaatacttaacaaaagcacttaaaa- 226  Q
    |||||||||| |||||||||||  ||||| ||||||||||||||||||||||| ||||  ||    |||||||  |||||||||||| | |||||||||     
T  30568668 aattaatattattttcatcactctcaattcaatatatttcactttgcatttatgatagcagagaatgaatgcactaatacttaacaataacacttaaaac 30568767  T
Q  227 caattttctctatccttcatttatacattt 256  Q
    || |||||||| |||||| |||||||||||    
T  30568768 catttttctctttccttcctttatacattt 30568797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 161 - 256
Target Start/End: Complemental strand, 35909642 - 35909546
Alignment:
Q  161 taatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacattt 256  Q
    |||||||||||||||| |||||||||||||||| |||||| ||||||||||||||  |||||||||  | |||| ||| || |||||||||||||||    
T  35909642 taatatatttcactttacatttataatagtggaaaatgcaccaatacttaacaaatacacttaaaattatttttatctttcattcatttatacattt 35909546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 118 - 256
Target Start/End: Original strand, 49812224 - 49812363
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||||| | ||||||||  | |||||  |||||||| |||||| ||||||| |||||||| |||||| |||||||||||||  |    
T  49812224 ccctttataactctaattaatactattttcatctttcccaatacaatatattccactttacatttatgatagtggataatgcaccaatacttaacaagtg 49812323  T
Q  218 cacttaaaac-aattttctctatccttcatttatacattt 256  Q
    |||||||||| | |||| ||| ||||||||||||| ||||    
T  49812324 cacttaaaactatttttttctctccttcatttataaattt 49812363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 32559184 - 32559266
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa 226  Q
    |||||||||| | ||||||||||||| || |||||| |||| |||||||||||| ||| ||||||||||||||||| ||||||    
T  32559184 tttcatcactcctaatttaatatattccattttgcacttattatagtggagaatacattaatacttaacaaaagcatttaaaa 32559266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 4357577 - 4357701
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caat 230  Q
    |||||||| | ||||||||||| |||||| |||||||||   |||| |||||| |||||| ||||| || ||||||||||||||| ||||||||| ||      
T  4357577 aattaatactattttcatcactcccaattcaatatattttt-tttgtatttatgatagtgaagaatccaccaatacttaacaaaaacacttaaaatcatc 4357675  T
Q  231 tttctctatccttcatttatacattt 256  Q
    ||||||| ||||||||||||| ||||    
T  4357676 tttctctctccttcatttatatattt 4357701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 41436530 - 41436591
Alignment:
Q  172 actttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt 233  Q
    ||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| |||||    
T  41436530 actttgcatttatgatagtggagaatgcaccaatacataacaaaagcacttaaaaccatttt 41436591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 50328145 - 50328064
Alignment:
Q  156 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttctct 237  Q
    ||||| ||||||||||||||||||||||| ||||||| ||||||| |||||||| ||||   |||||||||| |||||||||    
T  50328145 caattcaatatatttcactttgcatttatgatagtggtgaatgcaccaatacttgacaagtacacttaaaaccattttctct 50328064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 256
Target Start/End: Complemental strand, 1825346 - 1825219
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatc--aatacttaacaaaagcacttaaaac-a 228  Q
    |||||||||| ||||||||| || ||||| |||||||| |||||| ||||||| | ||| ||||||||||   ||||||||||||  ||||||||||| |    
T  1825346 aattaatattattttcatcattttcaattcaatatattccactttacatttatgaaagttgagaatgcatactaatacttaacaagtgcacttaaaacta 1825247  T
Q  229 attttctctatccttcatttatacattt 256  Q
     |||||| | ||||| ||||||||||||    
T  1825246 tttttctatctcctttatttatacattt 1825219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 256
Target Start/End: Original strand, 31862827 - 31862923
Alignment:
Q  161 taatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacattt 256  Q
    ||||||||| |||||||||| ||| |||||| ||| |||||||||||||||||| || | |||||| || ||||||| |||||||||| ||||||||    
T  31862827 taatatattccactttgcatctatgatagtgaagagtgcatcaatacttaacaagagaaattaaaaccatttttctccatccttcattgatacattt 31862923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 118 - 256
Target Start/End: Original strand, 38976986 - 38977126
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaa-tgcatcaatacttaacaaaa 216  Q
    |||||||||| |  |||||||| |  |||||||| || ||||| |||||||| |||||| ||||||| |||| |||||| |||| |||||||||| ||      
T  38976986 ccctttataactctaattaatactactttcatcattttcaattcaatatattccactttacatttatgataggggagaaatgcaccaatacttaagaagt 38977085  T
Q  217 gcacttaaaac-aattttctctatccttcatttatacattt 256  Q
    ||||||||||| | |||||||| | ||||||||||||||||    
T  38977086 gcacttaaaactatttttctctcttcttcatttatacattt 38977126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 39258384 - 39258243
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaata---cttaacaa 214  Q
    |||||||||| || |||||||| |  ||||||||||  |||||||||||||| || ||| ||||||| |||||  ||||||||  ||||   ||||||||    
T  39258384 ccctttataactttaattaataatactttcatcactctcaatttaatatattccattttacatttatgatagtaaagaatgcacgaatagtgcttaacaa 39258285  T
Q  215 aagcacttaaaacaattttctctatccttcatttatacattt 256  Q
     |||||||||||  ||||||||| || |||| ||||||||||    
T  39258284 gagcacttaaaatcattttctctctcattcacttatacattt 39258243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 226
Target Start/End: Original strand, 42544205 - 42544312
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 218  Q
    ||||||||| |  ||||||||||  ||| ||||||  ||||| |||||||| |||||||||||||| ||||||||||||  |  |||||||||||| |||    
T  42544205 cctttataactctaattaatattacttttatcactcacaattcaatatattccactttgcatttatgatagtggagaatagactaatacttaacaagagc 42544304  T
Q  219 acttaaaa 226  Q
    ||||||||    
T  42544305 acttaaaa 42544312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 256
Target Start/End: Original strand, 45290033 - 45290170
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  ||| |||||| ||||||||||| |||||| |||||| | |||||||||||||  |||||||||||| || |||||||| | || ||    
T  45290033 ccctttataactctaatcaatattattttcatcactcccaattgaatatact-cactttgcatttacgatagtggagaatacaccaatactt-agaatag 45290130  T
Q  218 cacttaaaac-aattttctctatccttcatttatacattt 256  Q
    |||||||||| | ||||| || ||||| ||||||||||||    
T  45290131 cacttaaaactatttttccctctcctttatttatacattt 45290170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 277
Target Start/End: Complemental strand, 52677117 - 52676978
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcct 242  Q
    ||||||||||  ||||||||||||||| ||||| ||||||| ||| ||   |||||||||||||||| ||| ||||||||||| || |||||||| || |    
T  52677117 tttcatcactctcaatttaatatattttactttacatttatgataatgataaatgcatcaatacttatcaagagcacttaaaatcatttttctctttcat 52677018  T
Q  243 tcatttatacat-----ttaataaatgtgaaatgagcaaa 277  Q
    ||| | ||||||     ||||||||| |||||||||||||    
T  52677017 tcactaatacatttttcttaataaatatgaaatgagcaaa 52676978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 28974327 - 28974440
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcct 242  Q
    ||||||||||  || || |||||||| | |||||||||||| ||| ||||||||||| ||||||||||||| | ||||||||| || |||| |||  | |    
T  28974327 tttcatcactctcatttcaatatattcccctttgcatttatgataatggagaatgcaccaatacttaacaacaacacttaaaaccacttttatctccctt 28974426  T
Q  243 tcatttatacattt 256  Q
    ||||||||||||||    
T  28974427 tcatttatacattt 28974440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 49448874 - 49448975
Alignment:
Q  156 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacat 254  Q
    ||||| ||||||||  ||||||||||||| ||| | |||||||||  ||||||| |||| ||||||||||| || |||||||| ||||||| ||||||||    
T  49448874 caattcaatatattatactttgcatttatgataatagagaatgcacaaatacttgacaagagcacttaaaaccatttttctctctccttcacttatacat 49448973  T
Q  255 tt 256  Q
    ||    
T  49448974 tt 49448975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 165 - 256
Target Start/End: Original strand, 26185224 - 26185316
Alignment:
Q  165 atatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacattt 256  Q
    ||||| ||| |||||||||| ||||||||||||  | ||||||||||||| || | |||||| || |||||||| ||||||||||||||||||    
T  26185224 atattccacgttgcatttatgatagtggagaatagaccaatacttaacaagagtatttaaaaccatttttctctctccttcatttatacattt 26185316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 148 - 256
Target Start/End: Complemental strand, 51572310 - 51572203
Alignment:
Q  148 atcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttctctatccttcatt 247  Q
    ||||||||||||| |||||||| |||||| ||||||| ||||| || |||||| |||||| |||| ||||  |||||||| | ||| | | |||||||||    
T  51572310 atcacttccaattcaatatattacactttacatttatgatagtagaaaatgcaccaatacataacgaaagttcttaaaacca-tttgtgtctccttcatt 51572212  T
Q  248 tatacattt 256  Q
    |||||||||    
T  51572211 tatacattt 51572203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 132 - 257
Target Start/End: Complemental strand, 16493394 - 16493270
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caat 230  Q
    ||||||||||  |||||| |||||||||| |||||||| ||||||||| |||| ||||  |||||||||  ||||||| |||||| ||||||||| || |    
T  16493394 aattaatattactttcataacttccaattcaatatattccactttgca-ttatgatagctgagaatgcacaaatactt-acaaaaacacttaaaaccatt 16493297  T
Q  231 tttctctatccttcatttatacattta 257  Q
    ||| ||| || || |||||||||||||    
T  16493296 tttttctctcttttatttatacattta 16493270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 51527439 - 51527501
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaata 206  Q
    |||||||| || ||||| ||||||||||||||| ||||||| ||||||||||||||| |||||    
T  51527439 tttcatcattttcaattcaatatatttcactttacatttatgatagtggagaatgcaccaata 51527501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 256
Target Start/End: Original strand, 34021059 - 34021171
Alignment:
Q  145 ttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcctt 243  Q
    |||||||||  ||||| ||||||||  ||||||||||||| ||||| ||||||||| ||||||  ||||| | |||| ||||  | |||||||| |||||    
T  34021059 ttcatcactctcaattcaatatattagactttgcatttatgatagtagagaatgcaccaataccgaacaagaacactgaaaattatttttctctctcctt 34021158  T
Q  244 catttatacattt 256  Q
     ||||||||||||    
T  34021159 tatttatacattt 34021171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 157 - 256
Target Start/End: Original strand, 4727555 - 4727654
Alignment:
Q  157 aatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttctctatccttcatttatacattt 256  Q
    ||||| |||||||  | ||||||||||| ||| |||| |||||||||||| ||||||| | || ||||| || |||||||| ||||||| ||||| ||||    
T  4727555 aattttatatattctaatttgcatttatgataatggaaaatgcatcaatatttaacaagaacatttaaatcatttttctctctccttcaattatatattt 4727654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 8065572 - 8065643
Alignment:
Q  162 aatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt 233  Q
    |||||||  |||||| ||||||| ||||| ||||||||| |||||||||||||  ||||||||||| |||||    
T  8065572 aatatataccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactatttt 8065643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 164 - 256
Target Start/End: Original strand, 21240934 - 21241028
Alignment:
Q  164 tatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaa--ttttctctatccttcatttatacattt 256  Q
    ||||||||||||||||||||| ||| ||| ||||  | |||||||| |||| |||||||||||| |  |||||||| |||||||  |||||||||    
T  21240934 tatatttcactttgcatttatgataatggtgaattgaccaatacttgacaagagcacttaaaactattttttctctctccttcacctatacattt 21241028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 43421328 - 43421375
Alignment:
Q  151 acttccaatttaatatatttcactttgcatttataatagtggagaatg 198  Q
    |||||||||| ||||||||||| ||||||||||| |||||||||||||    
T  43421328 acttccaattcaatatatttcattttgcatttatgatagtggagaatg 43421375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 206
Target Start/End: Original strand, 42132822 - 42132896
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaata 206  Q
    ||||||||||  ||||| ||||||||||| ||||||||  ||||||||||||| |||  | ||||||||||||||    
T  42132822 aattaatattactttcaccacttccaattcaatatattctactttgcatttatgataaagaagaatgcatcaata 42132896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 122 - 215
Target Start/End: Original strand, 37786960 - 37787053
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaa 215  Q
    ||||||||| |||||||||| |||||| ||||| ||||||||||||||  | ||| |||||||  ||  | ||||||||||| ||||| |||||    
T  37786960 ttataattttaattaatattattttcaccactttcaatttaatatattctattttacatttatggtaaagaagaatgcatcactacttgacaaa 37787053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 43335186 - 43335145
Alignment:
Q  63 ctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  43335186 ctaaaataactgatttatttcacttttcaatacaatattaat 43335145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 118 - 207
Target Start/End: Original strand, 48740515 - 48740604
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatac 207  Q
    |||||||||| |  ||||||||||  ||| |||| ||  |||| |||||||| |||||| ||||||| ||||||||||||||| ||||||    
T  48740515 ccctttataactctaattaatattacttttatcatttttaattcaatatattccactttacatttatgatagtggagaatgcaccaatac 48740604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 11583969 - 11583913
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataata 188  Q
    ||||||||||  ||||||||||  ||||||||||||||| ||||| |||||||||||    
T  11583969 aattaatattactttcatcactctcaatttaatatattttactttacatttataata 11583913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 226
Target Start/End: Complemental strand, 27790528 - 27790424
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 221  Q
    ||||||||| ||||||||||  |||||| ||||| |||||||||||||  | ||||||||||  ||  ||| |||||||  |||| || |||| ||||||    
T  27790528 ttataattttaattaatattactttcattacttctaatttaatatattcaattttgcatttaagatgatggtgaatgcactaatatttgacaagagcact 27790429  T
Q  222 taaaa 226  Q
    |||||    
T  27790428 taaaa 27790424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 35027595 - 35027543
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttat 184  Q
    |||| ||||| |||||||||||| ||||||||||||||| ||||||| |||||    
T  35027595 aattcatattattttcatcactttcaatttaatatatttaactttgcgtttat 35027543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 51572393 - 51572349
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||||| ||| || |||||||||||||||||||||||||    
T  51572393 gtcctaaaataattgacttatttcacttttcaatacaatattaat 51572349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 6506168 - 6506085
Alignment:
Q  174 tttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacattt 256  Q
    ||||||||||| ||||| |||||||||  |||| |||||||||  | |||||| ||||||||| | |||||||||||| |||||    
T  6506168 tttgcatttatgatagtagagaatgcacaaatatttaacaaaaatatttaaaaccaattttctttctccttcatttatgcattt 6506085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 40881256 - 40881189
Alignment:
Q  166 tatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt 233  Q
    |||| |||||| ||||||| |||||||||||| |||||||| |||||||| | | ||||||| |||||    
T  40881256 tattccactttacatttatgatagtggagaatacatcaatatttaacaaatgtaattaaaactatttt 40881189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 214
Target Start/End: Original strand, 18509850 - 18509932
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 214  Q
    |||||||| | |||||| ||||| || || |||||||| ||||||| ||||||  |||| || |||||| |||||||||||||    
T  18509850 aattaatactattttcaccacttacacttcaatatattccactttgtatttatgttagtagataatgcaccaatacttaacaa 18509932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 26799290 - 26799221
Alignment:
Q  156 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaa 225  Q
    ||||| ||||||||  | ||||||||||| |||||||| ||| ||||||||||||| || | ||||||||    
T  26799290 caattcaatatattctattttgcatttatgatagtggaaaatacatcaatacttaaaaagaacacttaaa 26799221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 47846920 - 47847000
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaa 225  Q
    |||||||||| | |||| ||||||||||||||||||||||| ||| | |||||||||  ||||| ||| || |||| |||||    
T  47846920 tttcatcactcctaattcaatatatttcactttgcatttatgata-tagagaatgcacaaatacataagaagagcatttaaa 47847000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 48400705 - 48400604
Alignment:
Q  156 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacat 254  Q
    ||||| ||||||||  ||||| ||||||| |||  | ||||| ||||||||||| | ||||||| | |||| || |||||||| || |||||||||||||    
T  48400705 caattcaatatattctactttacatttatgataaagaagaatacatcaatacttgataaaagcattaaaaatcatttttctctctctttcatttatacat 48400606  T
Q  255 tt 256  Q
    ||    
T  48400605 tt 48400604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 1825414 - 1825370
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||||||||| |  ||||||||||||||| |||||||||    
T  1825414 gtcctaaaataactgagtcatttcacttttcaatataatattaat 1825370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 3685952 - 3685996
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||||||||| |  ||||||||| |||||||||||||||    
T  3685952 gtcctaaaataactgagtcatttcactttccaatacaatattaat 3685996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 28974253 - 28974293
Alignment:
Q  65 aaaataactgaattgtttcacttttcaatacaatattaata 105  Q
    ||||||||||| |  ||||||||||||||||||||||||||    
T  28974253 aaaataactgagtcatttcacttttcaatacaatattaata 28974293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 33047439 - 33047483
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||| ||||||||||| |  |||||||||||||||||||||||||    
T  33047439 gtcccaaaataactgagtcatttcacttttcaatacaatattaat 33047483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 45289983 - 45290019
Alignment:
Q  65 aaaataactgaattgtttcacttttcaatacaatatt 101  Q
    |||||||||||||| |||||||||||| |||||||||    
T  45289983 aaaataactgaattatttcacttttcagtacaatatt 45290019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 49812170 - 49812214
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||| ||||||||||| |  |||||||||||||||||||||||||    
T  49812170 gtcccaaaataactgagtcatttcacttttcaatacaatattaat 49812214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 3e-31; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 23684980 - 23685093
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatcct 242  Q
    ||||||||||  ||||| ||||||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||||||| |||||||||| ||||    
T  23684980 tttcatcactctcaattcaatatatttcactttgcatttatgatagtggagaatgcactaatacttaacaaaaacacttaaaactaattttctctctcct 23685079  T
Q  243 tcatttatacattt 256  Q
    | ||||||||||||    
T  23685080 ttatttatacattt 23685093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 28572236 - 28572341
Alignment:
Q  151 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttctctatccttcatttat 250  Q
    |||||||||| ||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| |||||||||||  ||||||||| ||||| ||||||    
T  28572236 acttccaattcaatatatttcattttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaatcattttctctctcctttatttat 28572335  T
Q  251 acattt 256  Q
    ||||||    
T  28572336 acattt 28572341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 28925960 - 28925821
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||||| |||||| |||| | |||||| ||||||||||||||| || |||| |||||||||||||||||||||||||||||  |    
T  28925960 ccctttataactctaattaatactgttttgatcattcccaattcaatatatttcactttacaattatgatagtggagaatgcatcaatacttaacaagtg 28925861  T
Q  218 cacttaaaac-aattttctctatccttcatttatacattt 256  Q
    |||||||||| | |||||||| ||||| ||||||||||||    
T  28925860 cacttaaaactatttttctctctcctttatttatacattt 28925821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 3100428 - 3100534
Alignment:
Q  151 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcattta 249  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| | ||||||||| || |||||||| |||||||||||    
T  3100428 acttccaatttaatatattccactttgcatttatgatagtggagaatgcagcaatacttaacaagatcacttaaaatcatttttctctctccttcattta 3100527  T
Q  250 tacattt 256  Q
    || ||||    
T  3100528 tatattt 3100534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 28301455 - 28301568
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcct 242  Q
    ||||||||||  ||||| ||||||||||||||||||||||| ||||||||||||  | ||||||||||||| ||||||||||| || |||||||| ||||    
T  28301455 tttcatcactctcaattcaatatatttcactttgcatttatgatagtggagaatagaccaatacttaacaagagcacttaaaaccatttttctctttcct 28301554  T
Q  243 tcatttatacattt 256  Q
    ||||||||||||||    
T  28301555 tcatttatacattt 28301568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 64 - 256
Target Start/End: Complemental strand, 7650137 - 7649949
Alignment:
Q  64 taaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaatttaa 163  Q
    ||||||||||||||  |||||||||| ||||||||||||||  |||        || ||||||| |  |||||||| | | ||||||| || ||||| ||    
T  7650137 taaaataactgaatcatttcacttttaaatacaatattaat--tac--ttttttccttttataactctaattaatactatcttcatcattttcaattcaa 7650042  T
Q  164 tatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttctctatccttcatttatacattt 256  Q
    |||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| | ||| | || ||||||||||||||||||    
T  7650041 tatattccactttgcatttatgatagtggagaatgcatcagtacttaacaagagcacttaaaatattttgcgctctccttcatttatacattt 7649949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 2882024 - 2882119
Alignment:
Q  162 aatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacattt 256  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||| || |||||| | || |||||||||||||||    
T  2882024 aatatatttcactttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaatcatttttctatctctttcatttatacattt 2882119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 37247996 - 37247857
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  ||||||||||  |||||||||   ||||| ||||||||||||||||||||||| ||||||||||||  | ||||||||||||| ||    
T  37247996 ccctttataactctaattaatattactttcatcacactcaattcaatatatttcactttgcatttatgatagtggagaatagaccaatacttaacaagag 37247897  T
Q  218 cacttaaaac-aattttctctatccttcatttatacattt 256  Q
    |||||||||| | |||| ||| |||||| |||||||||||    
T  37247896 cacttaaaactatttttttctttccttcttttatacattt 37247857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 60 - 256
Target Start/End: Complemental strand, 5212124 - 5211931
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaat 159  Q
    |||||||||||||||| || |||||||||||||||||||||||||  |||         ||||||||| || |||||||| |  |||||  |||| ||||    
T  5212124 gtcctaaaataactgagttatttcacttttcaatacaatattaat--tacttttttt--cctttataaatttaattaatactactttcacaactttcaat 5212029  T
Q  160 ttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcatttatacattt 256  Q
    | |||||||| |||||||||||||| ||||| || ||||||  |||||||||||| |||||||||||| | ||||| || | ||||||||||||||||    
T  5212028 tcaatatattccactttgcatttatgatagttgataatgcacaaatacttaacaagagcacttaaaactatttttccctcttcttcatttatacattt 5211931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 41436112 - 41436212
Alignment:
Q  156 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttctctatccttcatttatacatt 255  Q
    ||||| |||||||| |||||||||||||| |||||| ||||| |||||||||||||||||| |||||||||  ||||||||| |  ||||||||||||||    
T  41436112 caattcaatatattccactttgcatttatgatagtgaagaatacatcaatacttaacaaaaacacttaaaattattttctctctaattcatttatacatt 41436211  T
Q  256 t 256  Q
    |    
T  41436212 t 41436212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 24775894 - 24775781
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcct 242  Q
    |||||||| ||  |||| ||||||||||||||| ||||||| |||||||||||| || |||||||||||||  ||||||||||  | |||||||| ||||    
T  24775894 tttcatcatttttaattcaatatatttcactttacatttatgatagtggagaatacaccaatacttaacaagtgcacttaaaattatttttctctctcct 24775795  T
Q  243 tcatttatacattt 256  Q
    ||||||||||||||    
T  24775794 tcatttatacattt 24775781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 30757654 - 30757541
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatcct 242  Q
    |||||||| | |||||| |||||||| || ||| ||||||| |||||||| ||||||| ||||||||||||  ||||||||||| | |||||||| ||||    
T  30757654 tttcatcattcccaattcaatatattccaatttacatttatgatagtggaaaatgcattaatacttaacaagtgcacttaaaactatttttctctctcct 30757555  T
Q  243 tcatttatacattt 256  Q
    ||||||||||||||    
T  30757554 tcatttatacattt 30757541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 152 - 256
Target Start/End: Complemental strand, 44534561 - 44534456
Alignment:
Q  152 cttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttat 250  Q
    ||||||||| |||||||| |||||||||||||| ||||||||||||| | ||||||||||||| | || |||||| || |||| ||| ||||||||||||    
T  44534561 cttccaattcaatatattccactttgcatttatgatagtggagaatgtaccaatacttaacaagaacatttaaaatcatttttttctgtccttcatttat 44534462  T
Q  251 acattt 256  Q
    ||||||    
T  44534461 acattt 44534456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 13375301 - 13375161
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaatatattt-cactttgcatttataatagtggagaatgcatcaata-cttaacaaaa 216  Q
    ||||||||| |  |||||||||| ||||||||| |  ||||| ||||||||| |||||| ||||||| ||||||||||||||| ||||| ||||||||      
T  13375301 cctttataactctaattaatattattttcatcattctcaattcaatatattttcactttacatttatgatagtggagaatgcaccaataccttaacaact 13375202  T
Q  217 gcacttaaaacaattt-tctctatccttcatttatacattt 256  Q
    ||||||||||  |||| ||||| ||||||||||||||||||    
T  13375201 gcacttaaaattatttatctctctccttcatttatacattt 13375161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 11726830 - 11726695
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 221  Q
    ||||||||| |||||||| |  ||||||||||   |||| ||||||||  |||||||| |||| |||||||||||||||| ||||| |||||| || |||    
T  11726830 ttataattttaattaatactactttcatcactcttaattcaatatattctactttgcaattatgatagtggagaatgcattaatacataacaatagtact 11726731  T
Q  222 taaaac-aattttctctatccttcatttatacattt 256  Q
    |||||| | |||||||| |||||||| |||||||||    
T  11726730 taaaactatttttctctctccttcatctatacattt 11726695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 118 - 251
Target Start/End: Complemental strand, 28108487 - 28108353
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||||| |  |||||||| |  ||||| |||||||| |||||| ||| ||| ||||||||||||||| |||||||||||||  |    
T  28108487 ccctttataactctaattaatactactttcatcattctcaattcaatatattccactttacatgtatgatagtggagaatgcaccaatacttaacaagtg 28108388  T
Q  218 cacttaaaac-aattttctctatccttcatttata 251  Q
    |||||||||| | |||||||| |||||||||||||    
T  28108387 cacttaaaactatttttctctctccttcatttata 28108353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 15859454 - 15859318
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||| |||  |||||  ||||| |||| |||||||||||||||||||||||    |||||||||||  ||||||||||||||||    
T  15859454 ccctttataactctaattaacattactttcacaacttctaattcaatatatttcactttgcatttatt---gtggagaatgccccaatacttaacaaaag 15859358  T
Q  218 cacttaaaac-aattttctctatccttcatttatacattt 256  Q
     ||||||||| | |||||||| ||||||||||||| ||||    
T  15859357 tacttaaaactatttttctctctccttcatttatatattt 15859318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 31546086 - 31545962
Alignment:
Q  162 aatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttataca-----tt 255  Q
    |||||||| |||||||||||| | |||||||||| |||||||||| ||||||| | ||||||||| || |||||  | |||||||||||||||     ||    
T  31546086 aatatattccactttgcatttgtgatagtggagagtgcatcaatatttaacaagatcacttaaaaccacttttccttctccttcatttatacattttttt 31545987  T
Q  256 taataaatgtgaaatgagcaaatga 280  Q
    ||||| |||||||||||||||||||    
T  31545986 taatatatgtgaaatgagcaaatga 31545962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 132 - 309
Target Start/End: Original strand, 28526973 - 28527156
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatt 231  Q
    ||||||||||  |||||  |||||||||| |||||| | |||||| ||| |||  ||||| ||||||||  |||||||||||| |||||||||||| |||    
T  28526973 aattaatattactttcacaacttccaattcaatatagtccactttacatatatggtagtgaagaatgcacgaatacttaacaagagcacttaaaaccatt 28527072  T
Q  232 ttctcta-tccttcatttatacattt-----aataaatgtgaaatgagcaaatgactaagtgaatttaggactgagggagtatt 309  Q
    || | |  ||||||||||||||||||     ||||  |||||||||||||||||||| ||| ||||  |||| || ||||||||    
T  28527073 tttttttctccttcatttatacatttttcttaatatgtgtgaaatgagcaaatgactcagttaattcgggacggatggagtatt 28527156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 171 - 256
Target Start/End: Original strand, 565137 - 565223
Alignment:
Q  171 cactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacattt 256  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| | ||||||||| || |||||| | |||||||| |||||||||    
T  565137 cactttgcatttatgatagtggagaatgcaccaatacttaacaagaacacttaaaatcatttttctttctccttcatatatacattt 565223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 18181288 - 18181210
Alignment:
Q  155 ccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt 233  Q
    |||||| || |||||  ||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| |||||    
T  18181288 ccaattcaaaatattctactttgcatttatgatagtggagaatgcaccaatacataacaaaagcacttaaaaccatttt 18181210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 2756683 - 2756808
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaa-t 230  Q
    |||||||| | ||| |||||||||||||||||||||||  ||||| ||||||| ||| |||  ||||||  ||||||| |||| ||||||||||| || |    
T  2756683 aattaatactatttacatcacttccaatttaatatattctactttacatttatgataatggtaaatgcactaatacttgacaagagcacttaaaataatt 2756782  T
Q  231 tttctctatccttcatttatacattt 256  Q
    ||||||| | ||||||| ||||||||    
T  2756783 tttctctcttcttcattaatacattt 2756808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 132 - 256
Target Start/End: Complemental strand, 43077824 - 43077699
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aat 230  Q
    ||||||||||  |||||||| || ||||| ||||||||||||||| ||||||| | |||||| |||||| ||||| |||||||   || ||||||| | |    
T  43077824 aattaatattactttcatcattttcaattcaatatatttcactttacatttatgacagtggaaaatgcaccaatagttaacaagtacatttaaaactatt 43077725  T
Q  231 tttctctatccttcatttatacattt 256  Q
    ||||||| || |||||||||||||||    
T  43077724 tttctctctcattcatttatacattt 43077699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 256
Target Start/End: Complemental strand, 36396531 - 36396431
Alignment:
Q  157 aatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacatt 255  Q
    |||||||||||||  ||||||||||||| | |||||||||||||  |||||| | ||| ||||||||||| || |||||||||| ||| |||||||||||    
T  36396531 aatttaatatattatactttgcatttatgacagtggagaatgcactaatactcatcaagagcacttaaaaccatttttctctatactttatttatacatt 36396432  T
Q  256 t 256  Q
    |    
T  36396431 t 36396431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 43950530 - 43950390
Alignment:
Q  148 atcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcat 246  Q
    ||||||| ||||| ||||||||  |||||||||||||  || |||| ||| |||||||||||||||||| || ||||||| | |||||||| || ||||     
T  43950530 atcactttcaattcaatatattctactttgcatttatgttaatggaaaatacatcaatacttaacaaaaacatttaaaactatttttctctctctttcac 43950431  T
Q  247 ttataca-----tttaataaatgtgaaatgagcaaatgact 282  Q
    |||||||     |||||||| ||||||||||| ||||||||    
T  43950430 ttatacattttttttaataagtgtgaaatgagtaaatgact 43950390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 435152 - 435053
Alignment:
Q  156 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcatttatacat 254  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||  |||| |||||||  ||||||||||| | |||| ||| || |||||||||||||    
T  435152 caattcaatatatttcactttacatttatgatagtggagaatgcactaatatttaacaagtgcacttaaaactatttttgtctctctttcatttatacat 435053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 39095630 - 39095717
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatactt 209  Q
    |||||| || ||||||||||  ||||||||||  ||||| |||||||| |||||||||||||| ||| ||||||||| ||||||||||    
T  39095630 ttataactttaattaatattactttcatcactgacaattcaatatattccactttgcatttatgataatggagaatgtatcaatactt 39095717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 36103387 - 36103274
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcct 242  Q
    ||||||||||   |||| |||||||| || |||  ||| || ||||||||||||||||| ||||||||||| | ||||||||| || |||||||| ||||    
T  36103387 tttcatcactctgaattcaatatattccattttatattcatgatagtggagaatgcatcgatacttaacaagaacacttaaaatcatttttctctctcct 36103288  T
Q  243 tcatttatacattt 256  Q
    |||||| |||||||    
T  36103287 tcatttgtacattt 36103274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 118 - 214
Target Start/End: Original strand, 10818616 - 10818712
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 214  Q
    |||||||||| |  |||||||||   |||||||||| | |||| |||| |||||||||||||||||| ||| | ||||||||| |||||||||||||    
T  10818616 ccctttataactctaattaatatcactttcatcactcctaattcaatacatttcactttgcatttatgatactagagaatgcaccaatacttaacaa 10818712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 3123639 - 3123780
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaata---tatttcactttgcatttataatagtggagaatgcatcaatacttaacaaa 215  Q
    ||||||||| |  |||||||||| |||||||||||  ||||| ||||   |||| || |||| |||||| |||||| |||||||| ||||||||||  ||    
T  3123639 cctttataactctaattaatattattttcatcactcacaattcaatactatattccattttgtatttatgatagtgaagaatgcaccaatacttaatgaa 3123738  T
Q  216 agcacttaaaa-caattttctctatccttcatttatacattt 256  Q
    |||||||||||  | |||||||| | ||||| ||||||||||    
T  3123739 agcacttaaaattatttttctctctacttcagttatacattt 3123780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 8031737 - 8031832
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 214  Q
    ||||||||| || |||||||| |  ||| |||| |  ||||| ||||||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  8031737 cctttataactttaattaatactacttttatcattcacaattcaatatatttaactttgcatttatgataatggagaatacatcaatacttaacaa 8031832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 40965090 - 40965148
Alignment:
Q  199 catcaatacttaacaaaagcacttaaaac-aattttctctatccttcatttatacattt 256  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||||||    
T  40965090 catcaatacttaacaaatgcacttaaaactatttttctctctccttcatttatacattt 40965148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 8550728 - 8550615
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcct 242  Q
    ||||||||||   |||| ||||||||  ||||||||||||| ||| |||||||||||  ||||||| |||| | ||||||||| || |||||||| || |    
T  8550728 tttcatcactcttaattcaatatattagactttgcatttatgataatggagaatgcacaaatacttgacaagaacacttaaaaccacttttctctctctt 8550629  T
Q  243 tcatttatacattt 256  Q
    ||| ||||||||||    
T  8550628 tcacttatacattt 8550615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 20027235 - 20027154
Alignment:
Q  145 ttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa 226  Q
    |||||||||||||||| |||||  | ||||||| |||||| ||| ||| ||||||| |||||||| |||||| |||||||||    
T  20027235 ttcatcacttccaattcaatatcctccactttgtatttatgataatggtgaatgcagcaatacttgacaaaaacacttaaaa 20027154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 33755296 - 33755391
Alignment:
Q  162 aatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacattt 256  Q
    |||||||| || ||||||||||| ||||   |||||  | ||||||||||||| | ||||||||| || |||||||| ||||||||||||||||||    
T  33755296 aatatattccattttgcatttatgatagaaaagaatagaccaatacttaacaataacacttaaaatcatttttctctctccttcatttatacattt 33755391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 190 - 256
Target Start/End: Original strand, 36155580 - 36155647
Alignment:
Q  190 tggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacattt 256  Q
    |||||||| || ||||||||||||| ||||||||||| || |||| ||| ||||||||||||||||||    
T  36155580 tggagaatacaccaatacttaacaagagcacttaaaatcatttttttctctccttcatttatacattt 36155647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 3487403 - 3487493
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcactt 222  Q
    ||||||||||  ||||||||||  ||||| ||||||||  ||||||||||| ||||| |||  ||||||||||||||| | |||| |||||    
T  3487403 aattaatattactttcatcactctcaattcaatatattctactttgcatttgtaataatggtaaatgcatcaatacttgataaaaacactt 3487493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 7648978 - 7648912
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttat 184  Q
    ||||||||||||  |||||||| | ||||||||||| |||||| |||||||||||| || |||||||    
T  7648978 ccctttataattctaattaatactattttcatcactcccaattcaatatatttcacattacatttat 7648912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 33602292 - 33602223
Alignment:
Q  164 tatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt 233  Q
    |||||| |||||||||||||| || ||| ||||||||  ||||| |||||| |||||||||||| |||||    
T  33602292 tatattccactttgcatttatgatggtgaagaatgcactaatacataacaagagcacttaaaaccatttt 33602223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 13222077 - 13222129
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttat 184  Q
    ||||||||||  ||||| ||||||||||| ||||||||| |||||||||||||    
T  13222077 aattaatattactttcaccacttccaattcaatatattttactttgcatttat 13222129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 44194597 - 44194637
Alignment:
Q  64 taaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  44194597 taaaataactgaatcatttcacttttcaatacaatattaat 44194637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 104
Target Start/End: Complemental strand, 42881438 - 42881399
Alignment:
Q  65 aaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  42881438 aaaataactgaatcatttcacttttcaatacaatattaat 42881399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 4794594 - 4794656
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaata 206  Q
    ||||||||||| ||||| |||||||| |||||||||||||| ||| |  | ||||||||||||    
T  4794594 tttcatcactttcaattcaatatattccactttgcatttatgataataaaaaatgcatcaata 4794656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 10069671 - 10069589
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa 226  Q
    ||||||||||  ||||| ||||||||  ||||||||||||| ||| |||  ||||||  ||||||| ||||||| ||||||||    
T  10069671 tttcatcactctcaattcaatatattcgactttgcatttatgataatggtaaatgcacaaatacttgacaaaagtacttaaaa 10069589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 1908592 - 1908515
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatactt 209  Q
    |||||||||| |||||| ||||||||||| ||||||||  ||||| ||||||| |||  | ||||||||  |||||||    
T  1908592 aattaatattattttcaccacttccaattcaatatattctactttacatttatgataaagaagaatgcactaatactt 1908515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 7213508 - 7213609
Alignment:
Q  156 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacat 254  Q
    ||||| |||||||| |||||| |||||||||||  | |||||||| ||||| || | ||| ||||| |||| || |||||||| |  |||||||||||||    
T  7213508 caattcaatatattccactttacatttataataaagaagaatgcaccaatatttgataaaggcactcaaaatcatttttctctctatttcatttatacat 7213607  T
Q  255 tt 256  Q
    ||    
T  7213608 tt 7213609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 8385020 - 8385061
Alignment:
Q  63 ctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    ||||||||| ||| || |||||||||||||||||||||||||    
T  8385020 ctaaaataattgacttatttcacttttcaatacaatattaat 8385061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 33602395 - 33602354
Alignment:
Q  63 ctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||||||  | |||||||||||||||||||||||||    
T  33602395 ctaaaataactgatctatttcacttttcaatacaatattaat 33602354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 18181380 - 18181336
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    ||||||||||||||||    |||||||||||||||||||||||||    
T  18181380 gtcctaaaataactgacccatttcacttttcaatacaatattaat 18181336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 26273758 - 26273862
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 221  Q
    |||||| || |||||||| |  |||||||||| |||||| ||||||||  ||||||||||||| ||| ||   |||| ||||||| |||| || |||| |    
T  26273758 ttataaatttaattaatactactttcatcactcccaattcaatatattctactttgcatttatgataatgataaatgtatcaatatttaaaaagagcaat 26273857  T
Q  222 taaaa 226  Q
    |||||    
T  26273858 taaaa 26273862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 28526909 - 28526949
Alignment:
Q  64 taaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    ||||||||||||||  ||||||||||||||| |||||||||    
T  28526909 taaaataactgaatcatttcacttttcaatataatattaat 28526949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 28572152 - 28572196
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||| ||||||||||| |  |||||||||||||||||||||||||    
T  28572152 gtcccaaaataactgagtcatttcacttttcaatacaatattaat 28572196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 31592549 - 31592641
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 214  Q
    |||||| || |||||||||| |||||||||||  ||||| ||||||||  |||||| |||||| |||    |||||||| |||||||| ||||    
T  31592549 ttataactttaattaatattattttcatcactctcaattcaatatattctactttgtatttatgataagaaagaatgcagcaatacttgacaa 31592641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 5e-30; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 11099590 - 11099451
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||||| |  |||||||||| |||||| |||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||     
T  11099590 ccctttataactctaattaatactactttcatcactcccaattcaatatattccactttgtatttatgatagtggagaatgcaccaatacttaacaaaaa 11099491  T
Q  218 cacttaaaac-aattttctctatccttcatttatacattt 256  Q
    |||||||||| | |||||||| || |||||||||||||||    
T  11099490 cacttaaaactatttttctctctctttcatttatacattt 11099451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 60 - 256
Target Start/End: Original strand, 3725128 - 3725320
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaat 159  Q
    |||||||||||||||| |  |||||||||||||||||||||||||  |          |||||||||| |  ||||||||||  ||||||||||  ||||    
T  3725128 gtcctaaaataactgagtcatttcacttttcaatacaatattaatttt-----tttttccctttataactctaattaatattactttcatcactcacaat 3725222  T
Q  160 ttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacattt 256  Q
    |  ||||||| |||| ||||||||| ||||||||||||||| ||||||||||||| ||||||||||| || |||||||| |||||| |||||||||||    
T  3725223 tcgatatattccactatgcatttatgatagtggagaatgcaccaatacttaacaatagcacttaaaaccatttttctctctccttcctttatacattt 3725320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 60 - 256
Target Start/End: Original strand, 6610776 - 6610971
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaat 159  Q
    |||| ||||||||||| |  |||||||||| ||||||||||||||  |||        | |||||||| || ||||||||||  |||||||||| | |||    
T  6610776 gtcccaaaataactgagtcatttcacttttaaatacaatattaat--tacttttttttctctttataactttaattaatattactttcatcactccgaat 6610873  T
Q  160 ttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaa-acaattttctctatccttcatttatacattt 256  Q
    | ||||||||||||||| ||||||| ||||||||||||||| |||||||||| |||| ||||||||  || |||||||| ||||||||| ||||||||    
T  6610874 tcaatatatttcactttacatttatgatagtggagaatgcaccaatacttaataaaaacacttaaactcatttttctctctccttcattgatacattt 6610971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 7613703 - 7613841
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 218  Q
    ||||||||| |  ||||||||||  ||| |||| |||||||| ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||  ||    
T  7613703 cctttataactataattaatattacttttatcatttccaattcaatatatttcactttacatttatgatagtggagaatgcaccaatacttaacaagtgc 7613802  T
Q  219 acttaaaac-aattttctctatccttcatttatacattt 256  Q
    ||||||||| | |||||||| ||||| ||||||||||||    
T  7613803 acttaaaactatttttctctttccttaatttatacattt 7613841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 8692930 - 8692792
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 218  Q
    ||||||||| |  ||||||||||  |||||  |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| | |    
T  8692930 cctttataactctaattaatattactttcacaacttccaatttaatatatttcattttgcatttatgatagtggagaatgcaccaatacttaacaagaac 8692831  T
Q  219 acttaaaa-caattttctctatccttcatttatacattt 256  Q
    |||||||| || |||||||  ||||||||||||| ||||    
T  8692830 acttaaaaccatttttctccctccttcatttatatattt 8692792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 63 - 256
Target Start/End: Original strand, 25814308 - 25814498
Alignment:
Q  63 ctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaattta 162  Q
    |||||||||||||||  |||||||||||||||||||||||||  |||        || ||||||| || ||||||||||  | |||||| |||||||| |    
T  25814308 ctaaaataactgaatcatttcacttttcaatacaatattaat--tactttttt--ccttttataactttaattaatattactctcatcatttccaattca 25814403  T
Q  163 atatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcatttatacattt 256  Q
    |||||||||||||| ||||||| |||||||| |||| | |||||||||||||  ||||||||||| | |||||||| |||||||||||| |||||    
T  25814404 atatatttcactttacatttatgatagtggataatgtaccaatacttaacaagtgcacttaaaactatttttctctctccttcatttatgcattt 25814498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 42575751 - 42575612
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| || |||||||| |  |||||  |||||||||| |||||||| |||||||||||||| |||||||||||| || ||||||||| ||| ||    
T  42575751 ccctttataactttaattaatactactttcacaacttccaattcaatatattccactttgcatttatgatagtggagaatacaccaatacttaccaagag 42575652  T
Q  218 cacttaaaa-caattttctctatccttcatttatacattt 256  Q
    ||||||||| || |||||||| || |||||||||||||||    
T  42575651 cacttaaaaccatttttctctctcattcatttatacattt 42575612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 132 - 256
Target Start/End: Complemental strand, 39183726 - 39183601
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caat 230  Q
    ||||||||||  ||||||||||  ||||| |||||||| |||||||||||||| |||||||||||| |||||||||||||| ||||||||||||| || |    
T  39183726 aattaatattactttcatcactctcaattcaatatattccactttgcatttatgatagtggagaattcatcaatacttaacgaaagcacttaaaatcatt 39183627  T
Q  231 tttctctatccttcatttatacattt 256  Q
    ||| ||| |  |||||||||||||||    
T  39183626 tttatctctttttcatttatacattt 39183601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 118 - 256
Target Start/End: Original strand, 33988195 - 33988334
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||| |||||  |||||| ||| |||||| |||||||| |||||| ||||||| |||||||||||| || |||||||||||||||     
T  33988195 ccctttataactctaattcatattactttcattactcccaattcaatatattccactttacatttatgatagtggagaatacaccaatacttaacaaaaa 33988294  T
Q  218 cacttaaaa-caattttctctatccttcatttatacattt 256  Q
    ||||||||| || |||||| | ||||||||||||||||||    
T  33988295 cacttaaaaccatttttctttctccttcatttatacattt 33988334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 132 - 257
Target Start/End: Original strand, 32539671 - 32539797
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaat- 230  Q
    |||||||| | |||||||||||||| ||||||||||||| | ||| ||||||| ||||||||||||||| |||||| ||| ||||||||||||||| ||     
T  32539671 aattaatactattttcatcacttccgatttaatatattttattttacatttatgatagtggagaatgcaccaatacataataaaagcacttaaaaccatc 32539770  T
Q  231 tttctctatccttcatttatacattta 257  Q
    ||| ||| |||||| ||||| ||||||    
T  32539771 tttgtctctccttcgtttattcattta 32539797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 121 - 256
Target Start/End: Original strand, 17935221 - 17935356
Alignment:
Q  121 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcac 220  Q
    |||||||||| |||||||||| |||||||||||  ||||||| |||||||||||||| |||||| ||  || ||||||||  |||| ||||||| | |||    
T  17935221 tttataattttaattaatattattttcatcactatcaatttattatatttcactttgtatttatgatgatgtagaatgcactaatatttaacaagaacac 17935320  T
Q  221 ttaaaacaattttctctatccttcatttatacattt 256  Q
    ||||| | ||||| |||  |||||||||||||||||    
T  17935321 ttaaacctattttttctcaccttcatttatacattt 17935356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 8369776 - 8369694
Alignment:
Q  151 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt 233  Q
    |||| ||||| |||||||| |||||||||||||| ||||||||||||||| ||||||||||||| |||| |||||||||||||    
T  8369776 actttcaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaacaagagcatttaaaacaatttt 8369694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 35646169 - 35646063
Alignment:
Q  151 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcattta 249  Q
    ||||| |||| |||||||| |||||||||||||| ||||||||||||||| ||||||||||||| | ||||||||| || |||||||| || ||||||||    
T  35646169 acttctaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaacaagatcacttaaaatcatttttctctctcattcattta 35646070  T
Q  250 tacattt 256  Q
    || ||||    
T  35646069 tatattt 35646063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 119 - 308
Target Start/End: Original strand, 42211329 - 42211520
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 218  Q
    ||||||||| |  |||||||| |  ||||||||||  ||||| ||||||||||||||||||||||| |||||||| ||| |||    ||||||||| |||    
T  42211329 cctttataactcaaattaatactactttcatcactcacaattcaatatatttcactttgcatttatgatagtggaaaatacat----acttaacaagagc 42211424  T
Q  219 acttaaaacaatttt-ctctatccttcatttatacattt-----aataaatgtgaaatgagcaaatgactaagtgaatttaggactgagggagtat 308  Q
    ||||||||| ||||| |||   |||||||||||||||||     ||||  ||||||||||||||||||||  || ||||| |||| ||||||||||    
T  42211425 acttaaaaccatttttctcccaccttcatttatacattttttttaatatgtgtgaaatgagcaaatgactcggttaatttgggacagagggagtat 42211520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 16283674 - 16283561
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcct 242  Q
    ||||||||||  ||||| |||||||| |||||||||||||| ||||| ||||||||| |||||| |||||||| || |||||| || |||| ||| ||||    
T  16283674 tttcatcactctcaattcaatatattccactttgcatttatgatagttgagaatgcaccaatacataacaaaatcatttaaaaccatttttttctctcct 16283575  T
Q  243 tcatttatacattt 256  Q
    ||||||||||||||    
T  16283574 tcatttatacattt 16283561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 118 - 256
Target Start/End: Original strand, 20189887 - 20190027
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  ||||||||||  |||||||| |  ||||| |||||||| |||||| ||||||| ||| |||||||||||||| ||||||||||| |    
T  20189887 ccctttataactctaattaatattactttcatcattctcaattcaatatattccactttacatttatgataatggagaatgcatcagtacttaacaaatg 20189986  T
Q  218 cacttaaaacaa--ttttctctatccttcatttatacattt 256  Q
    |||||||||| |  |||| ||| |||||||||||| |||||    
T  20189987 cacttaaaactattttttatctctccttcatttatgcattt 20190027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 35334613 - 35334500
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatcct 242  Q
    |||||||||| |||||| |||||||| |||||||||||||| ||||||||||||  |  ||||||||| || |||||||||||| | |||||||| ||||    
T  35334613 tttcatcactcccaattcaatatattccactttgcatttatgatagtggagaatagacaaatacttaataagagcacttaaaactatttttctctctcct 35334514  T
Q  243 tcatttatacattt 256  Q
    ||||||||| ||||    
T  35334513 tcatttatatattt 35334500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 39008156 - 39008266
Alignment:
Q  151 acttccaatttaatatatttcactttgcatttataatagt----ggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttca 245  Q
    |||||||||| ||||||||||||||| ||||||| |||||    |||||||| | ||||||||||||| ||||||||||| || |||||||| |||||||    
T  39008156 acttccaattcaatatatttcactttacatttatgatagttagtggagaatgaaccaatacttaacaagagcacttaaaaccatttttctctctccttca 39008255  T
Q  246 tttatacattt 256  Q
    |||||||||||    
T  39008256 tttatacattt 39008266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 6735456 - 6735377
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaa 211  Q
    ||||||||||  |||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||  |||||||||    
T  6735456 aattaatattactttcatcacttcaaatttaatatattccactttgcatttatgatagtggagaatgcacaaatacttaa 6735377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 36469203 - 36469068
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 221  Q
    ||||||||  |||||||| |  |||||||||||  |||| ||||||||  ||||||||||||| ||||||||||||||| |||||| |||||||| ||||    
T  36469203 ttataattctaattaatactactttcatcacttttaattcaatatattatactttgcatttatgatagtggagaatgcaccaatacataacaaaaacact 36469104  T
Q  222 ta-aaacaattttctctatccttcatttatacattt 256  Q
    || || || |||| | | ||||||||||||||||||    
T  36469103 tataatcatttttttatctccttcatttatacattt 36469068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 22582951 - 22582846
Alignment:
Q  151 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcattta 249  Q
    |||||||||| ||||| || |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| || |||||||| |  ||||||||    
T  22582951 acttccaattcaatat-ttccactttgcatttatgatagtggagaatgcatcattacttaacaagagcacttaaaatcatttttctctcttattcattta 22582853  T
Q  250 tacattt 256  Q
    || ||||    
T  22582852 tatattt 22582846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 36446774 - 36446661
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcactta-aaacaattttctctatcct 242  Q
    ||||||||||| ||||| ||||||||  ||||||||||||| |||||||||||||||  ||||| |||||||| |||||| || || |||| | | ||||    
T  36446774 tttcatcactttcaattcaatatattatactttgcatttatgatagtggagaatgcacaaatacataacaaaaacacttataatcatttttttatctcct 36446675  T
Q  243 tcatttatacattt 256  Q
    ||||||||||||||    
T  36446674 tcatttatacattt 36446661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 17243067 - 17242928
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||||| |  ||||||||||  ||||| |||||||| |||||||||||||| ||||| ||||||  | ||||||||||||| ||    
T  17243067 ccctttataactctaattaatactactttcatcactctcaattcaatatattccactttgcatttatgatagtagagaatagaccaatacttaacaagag 17242968  T
Q  218 cacttaaaa-caattttctctatccttcatttatacattt 256  Q
     ||| |||| || |||||||| || |||||||||||||||    
T  17242967 tactaaaaaccatttttctctctcattcatttatacattt 17242928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 119 - 282
Target Start/End: Original strand, 858331 - 858500
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 218  Q
    ||||||||| |  |||||||| |  ||||||||||  ||||| ||||||||||| ||||||||||| ||| ||||||||| | ||||| ||||||| |      
T  858331 cctttataactctaattaatactactttcatcactctcaattaaatatatttcattttgcatttatgataatggagaatgtaccaatatttaacaagata 858430  T
Q  219 acttaaaacaattttct-ctatccttcatttatacattt-----aataaatgtgaaatgagcaaatgact 282  Q
    ||||||||| ||||| | || ||||| ||||||||||||     ||||  ||||||||||||||||||||    
T  858431 acttaaaaccatttttttctctcctttatttatacatttttcttaatatgtgtgaaatgagcaaatgact 858500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 61 - 256
Target Start/End: Original strand, 4412325 - 4412515
Alignment:
Q  61 tcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaatt 160  Q
    ||||||||||||| | |  |||||||||||||||||||||||||  |||        |||||||||| |  |||||||| | ||||||||| ||| ||||    
T  4412325 tcctaaaataactaagtcatttcacttttcaatacaatattaat--tactttttt--ccctttataactctaattaatactattttcatcatttctaatt 4412420  T
Q  161 taatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaa-aacaattttctctatccttcatttatacattt 256  Q
     |||||||| || |   ||||||||||||| |||||||||||||||||||||||    |||||| | || |||||||| ||||||||||||||||||    
T  4412421 caatatattccagta--catttataatagtagagaatgcatcaatacttaacaagtagacttaatatcatttttctctctccttcatttatacattt 4412515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 14259665 - 14259770
Alignment:
Q  121 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcac 220  Q
    |||||||||  ||||||||||  |||||| ||| ||||||||| |||||  ||||||||||||||| |||| |||||||||   || |||||||||||||    
T  14259665 tttataattctaattaatattaatttcattactcccaatttaacatattatactttgcatttataacagtgtagaatgcatatgtatttaacaaaagcac 14259764  T
Q  221 ttaaaa 226  Q
    ||||||    
T  14259765 ttaaaa 14259770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 15254774 - 15254899
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caat 230  Q
    ||||||||||  ||||||||||| ||||| ||||||||  | |||||||| || |||| ||||||||||  ||||| |||||||| ||||||||| || |    
T  15254774 aattaatattactttcatcactttcaattcaatatattctaatttgcattaatgatagcggagaatgcactaatacataacaaaaacacttaaaatcatt 15254873  T
Q  231 tttctctatccttcatttatacattt 256  Q
    ||||| | |||| |||||||||||||    
T  15254874 tttctttttcctccatttatacattt 15254899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 214
Target Start/End: Complemental strand, 35585725 - 35585633
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 214  Q
    |||||| || ||| ||||||  ||||||||||  ||||| ||||||||||||||||  ||||| |||||||| ||||||||||||||||||||    
T  35585725 ttataactttaatcaatattactttcatcactctcaattcaatatatttcactttgtctttatgatagtggataatgcatcaatacttaacaa 35585633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 24231031 - 24231101
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 214  Q
    |||||||| || ||||| |||||||| |||||| |||||||  ||||||||||||||||||||||||||||    
T  24231031 tttcatcagtttcaattcaatatattccactttccatttatggtagtggagaatgcatcaatacttaacaa 24231101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 144 - 308
Target Start/End: Original strand, 33012375 - 33012545
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcct 242  Q
    |||||||||| ||||||  ||||||| ||||||| |||| ||| ||||| |||||||  |||||||||||| ||||||||||| || |||| ||| | ||    
T  33012375 tttcatcactcccaattctatatattccactttgaatttctaagagtggtgaatgcacaaatacttaacaagagcacttaaaaccatttttatctcttct 33012474  T
Q  243 tcatttatacat-----ttaataaatgtgaaatgagcaaatgactaagtgaatttaggactgagggagtat 308  Q
    |||||||||| |     ||||||  | |||||||||||||||||| ||| |||   |||| ||||||||||    
T  33012475 tcatttatacgtccttattaatatgtatgaaatgagcaaatgactcagttaatccgggacggagggagtat 33012545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 6629480 - 6629373
Alignment:
Q  144 tttcatcacttccaatttaatatattt-cactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttctctatcct 242  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||    |||||||| |||||||| |||| | |||| ||||| ||||||||  || |    
T  6629480 tttcatcactcccaatttaatatatttccactttgcatttataataaaaaagaatgcaccaatacttgacaaga-cactcaaaactattttctc--tctt 6629384  T
Q  243 tcatttataca 253  Q
    |||||||||||    
T  6629383 tcatttataca 6629373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 25108572 - 25108683
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 221  Q
    ||||||||| |||||||| |  ||||| ||||||||||| ||||||||  ||||| ||||||| |||  | |||||||| ||||||||||||||  ||||    
T  25108572 ttataattttaattaatactactttcaccacttccaattcaatatattatactttacatttatgataaagaagaatgcagcaatacttaacaaagacact 25108671  T
Q  222 taaaacaatttt 233  Q
     ||||| |||||    
T  25108672 caaaactatttt 25108683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 25167664 - 25167775
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 221  Q
    ||||||||| |||||||| |  ||||| ||||||||||| ||||||||  ||||| ||||||| |||  | |||||||| ||||||||||||||  ||||    
T  25167664 ttataattttaattaatactactttcaccacttccaattcaatatattatactttacatttatgataaagaagaatgcagcaatacttaacaaagacact 25167763  T
Q  222 taaaacaatttt 233  Q
     ||||| |||||    
T  25167764 caaaactatttt 25167775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 118 - 200
Target Start/End: Original strand, 13135748 - 13135830
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgca 200  Q
    |||||||||| || ||||| || |  |||||||||| | |||| |||||||| |||||||||||||| |||||||||||||||    
T  13135748 ccctttataactttaattactactactttcatcactcctaattcaatatattccactttgcatttatgatagtggagaatgca 13135830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 35666894 - 35667039
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatt 231  Q
    |||||||| | |||||||||||  ||  | ||||||||  |||||| |||||||||| |||  |||||| |||||||||| ||||||||||||||| |||    
T  35666894 aattaataatattttcatcactctcacatcaatatattctactttgtatttataataatggtaaatgcaccaatacttaagaaaagcacttaaaactatt 35666993  T
Q  232 ttctctatccttcatttatacat-----ttaataaatgtgaaatgag 273  Q
    || ||| ||||||| | ||| ||     |||||||||||||||||||    
T  35666994 tt-tctctccttcaataataaatttttcttaataaatgtgaaatgag 35667039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 36006991 - 36006886
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatt 231  Q
    |||||||||| |||||| ||||||||||| | ||||||  ||||| ||||||| |||  | ||||||||  ||||||| |||||  |||||||||| |||    
T  36006991 aattaatattattttcaccacttccaattcagtatattctactttacatttatgataaagaagaatgcacaaatacttgacaaagacacttaaaaccatt 36006892  T
Q  232 ttctct 237  Q
    ||||||    
T  36006891 ttctct 36006886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 25111257 - 25111146
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 221  Q
    ||||||||| |||||||| |  ||||| ||||||||||| ||||||||  ||||| ||||||| |||  | |||||||| |||||||| |||||  ||||    
T  25111257 ttataattttaattaatactactttcaccacttccaattcaatatattctactttacatttatgataaagaagaatgcagcaatacttgacaaagacact 25111158  T
Q  222 taaaacaatttt 233  Q
     ||||| |||||    
T  25111157 caaaactatttt 25111146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 25170348 - 25170237
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 221  Q
    ||||||||| |||||||| |  ||||| ||||||||||| ||||||||  ||||| ||||||| |||  | |||||||| |||||||| |||||  ||||    
T  25170348 ttataattttaattaatactactttcaccacttccaattcaatatattctactttacatttatgataaagaagaatgcagcaatacttgacaaagacact 25170249  T
Q  222 taaaacaatttt 233  Q
     ||||| |||||    
T  25170248 caaaactatttt 25170237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 15814705 - 15814807
Alignment:
Q  186 atagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt-ctctatccttcatttataca-----tttaataaatgtgaaatgagcaaatg 279  Q
    |||||||| ||| ||  |||||||||||| ||| ||||||| |||||| |||| |||||||||||||||     ||||||| ||||||||| ||||||||    
T  15814705 atagtggaaaatacacaaatacttaacaagagcgcttaaaataatttttctctctccttcatttatacattttttttaatatatgtgaaataagcaaatg 15814804  T
Q  280 act 282  Q
    |||    
T  15814805 act 15814807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 144 - 279
Target Start/End: Complemental strand, 39060509 - 39060368
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcct 242  Q
    ||||| ||||||||||  |||||| |  ||||||||||||| |||  | |||||| | |||||||||||||| ||||| |||| || |||||||| ||||    
T  39060509 tttcaccacttccaatacaatatagtctactttgcatttatgataaagaagaatggaccaatacttaacaaatgcactcaaaaccatttttctctctcct 39060410  T
Q  243 tcatttatacat-----ttaataaatgtgaaatgagcaaatg 279  Q
    ||| | ||| ||     ||||||| |||||||||||||||||    
T  39060409 tcactaatatatttttcttaataagtgtgaaatgagcaaatg 39060368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 7276324 - 7276368
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||||||||| || ||| |||||||||||||||||||||    
T  7276324 gtcctaaaataactgagttattttacttttcaatacaatattaat 7276368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 256
Target Start/End: Complemental strand, 13422451 - 13422332
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatt 231  Q
    ||||||||||  ||||||||||  ||||| |||||||||     ||||| ||| |||||| ||||||||  ||||| |||| |||||||||||| || ||    
T  13422451 aattaatattactttcatcactctcaattcaatatattt-----tgcatgtatgatagtgaagaatgcacaaatacataacgaaagcacttaaaccattt 13422357  T
Q  232 ttctctatccttcatttatacattt 256  Q
    |||| | ||||||||  ||||||||    
T  13422356 ttctttctccttcatcaatacattt 13422332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 17741207 - 17741148
Alignment:
Q  193 agaatgcatcaatacttaacaaaagcacttaaaacaattttctctatccttcatttataca 253  Q
    ||||||||||||||||||||||| ||||| ||||| ||||| ||| || ||||||||||||    
T  17741207 agaatgcatcaatacttaacaaaggcactcaaaactatttt-tctctctttcatttataca 17741148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 35585784 - 35585740
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||| |||||  |||||||||||||||||||||||||||    
T  35585784 gtcctaaaattactgatatgtttcacttttcaatacaatattaat 35585740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 41184730 - 41184794
Alignment:
Q  193 agaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcatttatacattt 256  Q
    |||||||| |||||||||||||  ||||||||||| | |||||| | ||||||||||||||||||    
T  41184730 agaatgcaccaatacttaacaagtgcacttaaaactatttttctttctccttcatttatacattt 41184794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 5357916 - 5357802
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caat 230  Q
    ||||||||||  ||||| ||||||||||  ||||||||  ||||| ||||||| |||  | |||||| | ||||||||||||||  |||| |||| || |    
T  5357916 aattaatattactttcaccacttccaatacaatatattctactttacatttatgataaagaagaatgaaccaatacttaacaaagacactcaaaaccatt 5357817  T
Q  231 tttctctatccttca 245  Q
    ||||||| |||||||    
T  5357816 tttctctctccttca 5357802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 16926171 - 16926089
Alignment:
Q  151 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt 233  Q
    |||||||||| ||||||||  ||||| ||||||| |||  | |||||||| ||||||||||| || ||||| ||||| |||||    
T  16926171 acttccaattcaatatattctactttccatttatgataaagaagaatgcaccaatacttaacgaaggcactcaaaaccatttt 16926089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 6173067 - 6172978
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt 233  Q
    ||||||||||  ||||| ||||||||  ||||||||||||| ||| |||  ||||||| |||| || | || |||||||||||| |||||    
T  6173067 tttcatcactcacaattcaatatattatactttgcatttatgataatggtaaatgcattaatatttgataagagcacttaaaactatttt 6172978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 4044643 - 4044599
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||| ||||||| |||||  |||||||||||||||||||||||||    
T  4044643 gtcccaaaataattgaatcatttcacttttcaatacaatattaat 4044599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 9426720 - 9426676
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||||| ||| |  |||||||||||||||||||||||||    
T  9426720 gtcctaaaataattgactcatttcacttttcaatacaatattaat 9426676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 13422514 - 13422474
Alignment:
Q  64 taaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||||| |  |||||||||||||||||||||||||    
T  13422514 taaaataactgattcatttcacttttcaatacaatattaat 13422474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 13597970 - 13598014
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||||| ||| |  |||||||||||||||||||||||||    
T  13597970 gtcctaaaataattgactcatttcacttttcaatacaatattaat 13598014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 15564987 - 15564935
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttat 184  Q
    ||||||||||  ||||||||||  ||||||||||||||  |||||||||||||    
T  15564987 aattaatattactttcatcactctcaatttaatatattctactttgcatttat 15564935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 22583038 - 22582994
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    ||||| |||||||||| || ||||| |||||||||||||||||||    
T  22583038 gtccttaaataactgagttatttcaattttcaatacaatattaat 22582994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 39008070 - 39008114
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||||||| | |  |||||||||||||||||||||||||    
T  39008070 gtcctaaaataactaagtcatttcacttttcaatacaatattaat 39008114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 5e-30; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 36467308 - 36467169
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||||| | ||||||||| |||||||| ||||||||||||||| ||||||| |||||||||||| || |||||||||||||  |    
T  36467308 ccctttataactcaaattaatactattttcatcatttccaattcaatatatttcactttacatttatcatagtggagaatccaccaatacttaacaagtg 36467209  T
Q  218 cacttaaaac-aattttctctatccttcatttatacattt 256  Q
    |||||||||| | |||||||| || |||||||||||||||    
T  36467208 cacttaaaactatttttctctctcattcatttatacattt 36467169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 118 - 257
Target Start/End: Complemental strand, 51749296 - 51749156
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  ||||||||||  |||||||||| |||||| |||||||| |||||||||||||| ||| ||||||||  | ||||||||||||| |     
T  51749296 ccctttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttatgataatggagaataaaccaatacttaacaagaa 51749197  T
Q  218 cacttaaaa-caattttctctatccttcatttatacattta 257  Q
    ||||||||| || |||||||| |||||||||||||||||||    
T  51749196 cacttaaaatcagttttctctctccttcatttatacattta 51749156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 5040688 - 5040549
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    ||||||| || || ||||| || | ||||||||||| | |||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| |     
T  5040688 ccctttacaactttaattattactattttcatcactcctaattcaatatatttcacttcgcatttatgatagtggagaatgcatcaatacttaacaagat 5040589  T
Q  218 cacttaaaa-caattttctctatccttcatttatacattt 256  Q
    ||| ||||| || |||||||| || |||||||||||||||    
T  5040588 cacctaaaaccatttttctctctcattcatttatacattt 5040549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 118 - 256
Target Start/End: Original strand, 28839334 - 28839473
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||||| |  |||||||||| |||||| |||||||| |||||||||||||| ||||||||||||  | ||||||||||||| ||    
T  28839334 ccctttataactataattaatactactttcatcactcccaattcaatatattccactttgcatttatgatagtggagaatagaccaatacttaacaagag 28839433  T
Q  218 cacttaaaac-aattttctctatccttcatttatacattt 256  Q
    || ||||||| | |||||||| ||||||||||||||||||    
T  28839434 catttaaaactatttttctctctccttcatttatacattt 28839473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 132 - 256
Target Start/End: Complemental strand, 17724813 - 17724688
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaa-t 230  Q
    |||||||| | ||||||||||| |||||| |||| |||  |||||||||||||  |||||||||||||||||||| ||||||| |||||||||||||| |    
T  17724813 aattaatactattttcatcactcccaattcaataaattctactttgcatttatggtagtggagaatgcatcaataattaacaagagcacttaaaacaatt 17724714  T
Q  231 tttctctatccttcatttatacattt 256  Q
    ||||||| |||||||||  |||||||    
T  17724713 tttctctctccttcattattacattt 17724688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 32587786 - 32587899
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcct 242  Q
    ||||||||||  ||||| ||||||||||||||||||||||| ||| |||| |||||||||||||||||||||| |||||||||  | ||||||||  |||    
T  32587786 tttcatcactctcaattcaatatatttcactttgcatttatgataatggaaaatgcatcaatacttaacaaaaacacttaaaattatttttctctcacct 32587885  T
Q  243 tcatttatacattt 256  Q
    ||||||||||||||    
T  32587886 tcatttatacattt 32587899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 64 - 256
Target Start/End: Complemental strand, 52830576 - 52830388
Alignment:
Q  64 taaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaatttaa 163  Q
    |||||||||||| |  |||||||||||||||||||||||||  |||        | ||||||||||| ||||| ||||  |||||||| |||||||| ||    
T  52830576 taaaataactgagtcatttcacttttcaatacaatattaat--tac--ttttttctctttataattttaattagtattactttcatca-ttccaattgaa 52830482  T
Q  164 tatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacattt 256  Q
    |||||| |||||| ||||||| |||||||| |||||| |||||||||||||| ||||| ||||  | |||||||| ||||||||||||||||||    
T  52830481 tatattccactttacatttatgatagtggaaaatgcaccaatacttaacaaatgcactcaaaattatttttctctctccttcatttatacattt 52830388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 121 - 256
Target Start/End: Complemental strand, 50267548 - 50267412
Alignment:
Q  121 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcac 220  Q
    |||||||||  ||||||||||  |||||||| | |||||| ||||||||||||||| ||||||| ||| ||||||||||| |||||||||||||  ||||    
T  50267548 tttataattctaattaatattactttcatcattcccaattcaatatatttcactttacatttatgataatggagaatgcaccaatacttaacaagtgcac 50267449  T
Q  221 ttaaaac-aattttctctatccttcatttatacattt 256  Q
    ||||||| | ||||||||  | |||||||||||||||    
T  50267448 ttaaaactatttttctctcactttcatttatacattt 50267412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 19533032 - 19532893
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| || |||||||| |  |||||||| || || || ||||||||||||||| ||||||| ||||||||||||| | |||||||||||||       
T  19533032 ccctttataactttaattaatactactttcatcatttacagttcaatatatttcactttacatttatgatagtggagaatgaaccaatacttaacaagta 19532933  T
Q  218 cacttaaaac-aattttctctatccttcatttatacattt 256  Q
    |||||||||| | |||||||||||||||||||||| ||||    
T  19532932 cacttaaaactatttttctctatccttcatttatatattt 19532893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 3555631 - 3555529
Alignment:
Q  155 ccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttataca 253  Q
    |||||| |||||||| |||||||||||||| ||||||||||||  | |||||||||| |||||||||||||| || ||||| ||||||||||||||||||    
T  3555631 ccaattcaatatattccactttgcatttatgatagtggagaatagaccaatacttaaaaaaagcacttaaaaccatttttccctatccttcatttataca 3555532  T
Q  254 ttt 256  Q
    |||    
T  3555531 ttt 3555529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 118 - 255
Target Start/End: Original strand, 26755971 - 26756109
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||||| |  |||||||| || ||||| |||||||| ||||||  |||||| |||||||||||||||||||||||||||||  |    
T  26755971 ccctttataactctaattaatactactttcatcattttcaattcaatatattacactttatatttatgatagtggagaatgcatcaatacttaacaagtg 26756070  T
Q  218 cacttaaaacaatttt-ctctatccttcatttatacatt 255  Q
    |||||||||| ||||| |||| || ||||||||||||||    
T  26756071 cacttaaaactattttcctctctcattcatttatacatt 26756109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 5442349 - 5442474
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caat 230  Q
    ||||||||||  |||||  |||||||||| |||||||| |||||||||||||| |||||||||||||||  |||||||||||| |  |||||||| || |    
T  5442349 aattaatattactttcacaacttccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagataacttaaaaccatt 5442448  T
Q  231 tttctctatccttcatttatacattt 256  Q
    ||||||| || |||||||||||||||    
T  5442449 tttctctctcattcatttatacattt 5442474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 32348239 - 32348352
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcct 242  Q
    |||||||||| |||||| |||||||| |||||||||||| | |||||||| |||  | ||||||||||||| ||||||||||| || |||||||| ||||    
T  32348239 tttcatcactcccaattcaatatattccactttgcatttgtgatagtggaaaatagaccaatacttaacaagagcacttaaaaccatttttctctctcct 32348338  T
Q  243 tcatttatacattt 256  Q
    ||||||||||||||    
T  32348339 tcatttatacattt 32348352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 46536361 - 46536530
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcct 242  Q
    ||||||||||   ||||||||||||| ||||||| |||||| |||||||||||| || ||||| ||||||| ||||||||||| || |||||||| ||||    
T  46536361 tttcatcactcttaatttaatatattccactttgtatttatgatagtggagaatacaacaatatttaacaagagcacttaaaaccatttttctctttcct 46536460  T
Q  243 tcatttatacat-----ttaataaatgtgaaatgagcaaatgactaagtgaatttaggactgagggagta 307  Q
    |||| |||| ||     |||||| |||||||| |||||||||||| ||| ||||  |||| |||||||||    
T  46536461 tcatctataaatttttcttaatacatgtgaaacgagcaaatgactcagttaattcgggacggagggagta 46536530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 157 - 256
Target Start/End: Original strand, 42926168 - 42926268
Alignment:
Q  157 aatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatacatt 255  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||| | ||||||||||||| ||||||||| || |||||||| || ||||||||||||||    
T  42926168 aattcaatatatttcattttgcatttatgatagtggagaatgcaccgatacttaacaaaaacacttaaaatcatttttctctttcattcatttatacatt 42926267  T
Q  256 t 256  Q
    |    
T  42926268 t 42926268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 49494275 - 49494137
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 218  Q
    ||||||||| || ||||||||||  |||||||| ||| |||| |||||||| |||||| ||||||| ||||||||||||  | ||||| |||||||  ||    
T  49494275 cctttataactttaattaatattactttcatcatttctaattcaatatattccactttacatttatgatagtggagaattgaccaatatttaacaagtgc 49494176  T
Q  219 acttaaaac-aattttctctatccttcatttatacattt 256  Q
    ||||||||| | |||||||| || |||||||||||||||    
T  49494175 acttaaaactatttttctctctctttcatttatacattt 49494137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 52432340 - 52432446
Alignment:
Q  151 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcattta 249  Q
    |||| ||||| ||||||||||||||| |||||||  ||||  |||||||||||||||||||||| ||||||||||| || |||||||| | |||||||||    
T  52432340 acttacaattcaatatatttcactttacatttatggtagtaaagaatgcatcaatacttaacaagagcacttaaaatcatttttctctcttcttcattta 52432439  T
Q  250 tacattt 256  Q
    |||||||    
T  52432440 tacattt 52432446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 144 - 233
Target Start/End: Original strand, 8773263 - 8773352
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt 233  Q
    |||||||||||| | ||||||||||| |||||||||| ||| | ||||||||||||| ||||||||||||| |||||||||||| |||||    
T  8773263 tttcatcacttctagtttaatatattccactttgcatatatgacagtggagaatgcaccaatacttaacaagagcacttaaaactatttt 8773352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 43895856 - 43895980
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatt 231  Q
    |||||||||| |||| || |||  ||||| ||||||||  ||||||||||||| |||||||||||  || ||||||||||||||| ||| |||||| |||    
T  43895856 aattaatattatttttattactctcaattcaatatattcaactttgcatttatgatagtggagaacacaccaatacttaacaaaaacacataaaactatt 43895955  T
Q  232 ttctctatccttcatttatacattt 256  Q
    |||||| || ||||| |||||||||    
T  43895956 ttctctctctttcatctatacattt 43895980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 28277125 - 28277009
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttct----ctat 239  Q
    |||||||| || ||||| ||||||||||||||| ||||||| ||| ||||||||||| |||||||||||||  ||||||||||| ||||| |    || |    
T  28277125 tttcatcattttcaattcaatatatttcactttacatttatgatactggagaatgcaccaatacttaacaagtgcacttaaaactattttttttttctct 28277026  T
Q  240 ccttcatttatacattt 256  Q
    |||||||||||||||||    
T  28277025 ccttcatttatacattt 28277009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 17342861 - 17342955
Alignment:
Q  156 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcattta 249  Q
    ||||| |||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||| ||||||||| || ||||| || |||||||||||    
T  17342861 caattcaatatatttcactttgtatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccatttttccctctccttcattta 17342955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 36784323 - 36784417
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa 226  Q
    |||||||||| ||||||  ||||| |||| ||||||||||||||||||||||| |||||||| ||||||  |||||||||||| ||||| |||||    
T  36784323 aattaatattattttcacaacttcaaattcaatatatttcactttgcatttatgatagtggaaaatgcacaaatacttaacaagagcacctaaaa 36784417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 169 - 308
Target Start/End: Original strand, 49944978 - 49945123
Alignment:
Q  169 ttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt-ctctatccttcatttatacattt-----aataaa 262  Q
    |||||||||||||||| |||| | ||||||||  |||||||||||| |||||||||||| ||||| |||| | ||||||||||||||||     ||||      
T  49944978 ttcactttgcatttatgatagagaagaatgcacaaatacttaacaagagcacttaaaaccatttttctctcttcttcatttatacatttttcttaatatg 49945077  T
Q  263 tgtgaaatgagcaaatgactaagtgaatttaggactgagggagtat 308  Q
    |||||||||||||||||||| ||| |||  ||||| ||| ||||||    
T  49945078 tgtgaaatgagcaaatgacttagttaatccaggacagagagagtat 49945123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 122 - 226
Target Start/End: Complemental strand, 13500838 - 13500734
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 221  Q
    ||||||||  |||||||| |  ||||| |||| |||||| ||||| || |||||||||||||| |||||| |||||||| |||||| |||||||||||||    
T  13500838 ttataattctaattaatactactttcagcactcccaattcaatattttccactttgcatttatgatagtgaagaatgcaccaatacataacaaaagcact 13500739  T
Q  222 taaaa 226  Q
    |||||    
T  13500738 taaaa 13500734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 121 - 256
Target Start/End: Complemental strand, 48242700 - 48242564
Alignment:
Q  121 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcac 220  Q
    ||||||| || ||||||||||  ||| |||| |  ||||| |||||||| |||||| ||||||| ||||||||| ||||||||||||||| |||  ||||    
T  48242700 tttataactttaattaatattacttttatcattctcaattcaatatattccactttacatttatgatagtggaggatgcatcaatacttatcaagtgcac 48242601  T
Q  221 ttaaaac-aattttctctatccttcatttatacattt 256  Q
    ||||||| | |||| ||  ||||||||||||||||||    
T  48242600 ttaaaactatttttatccctccttcatttatacattt 48242564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 118 - 256
Target Start/End: Original strand, 8327712 - 8327851
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||||| |  ||||||||||  ||||| |||||||| || ||||||||||| |||| |||||||  | ||||||||||||| ||    
T  8327712 ccctttataactctaattaatactactttcatcactctcaattcaatatattccattttgcatttatgataggggagaatagaccaatacttaacaagag 8327811  T
Q  218 cacttaaaa-caattttctctatccttcatttatacattt 256  Q
    |||||||||  | |||||||| || |||||||||||||||    
T  8327812 cacttaaaattatttttctctctcattcatttatacattt 8327851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 172 - 256
Target Start/End: Complemental strand, 10370244 - 10370158
Alignment:
Q  172 actttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaa--ttttctctatccttcatttatacattt 256  Q
    ||||||||||||| || ||| ||||||||| ||||||||||||||||||||||||| |  |||||||| ||||| ||||||||||||    
T  10370244 actttgcatttatgatggtgaagaatgcattaatacttaacaaaagcacttaaaactattttttctctctcctttatttatacattt 10370158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 30749960 - 30750041
Alignment:
Q  152 cttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt 233  Q
    |||| |||| |||||||  |||||||||||||| ||||| |||||| |||||||| |||||||||||||||||||| |||||    
T  30749960 cttcaaattcaatatataccactttgcatttatgatagtagagaatacatcaatatttaacaaaagcacttaaaactatttt 30750041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 30771411 - 30771492
Alignment:
Q  152 cttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt 233  Q
    |||| |||| |||||||  |||||||||||||| ||||| |||||| |||||||| |||||||||||||||||||| |||||    
T  30771411 cttcaaattcaatatataccactttgcatttatgatagtagagaatacatcaatatttaacaaaagcacttaaaactatttt 30771492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 46496014 - 46496150
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 218  Q
    ||||||||| |  |||||||| |  |||||||||  | |||| |||||||| |||||||||||||| ||| |||||||| ||||||| |||||||| | |    
T  46496014 cctttataactctaattaatactactttcatcacgcctaattcaatatattccactttgcatttatgataatggagaatacatcaatccttaacaagaac 46496113  T
Q  219 acttaaaacaattttctctatccttcatttatacattt 256  Q
    ||| ||||| ||||| ||| ||||||||||||| ||||    
T  46496114 actcaaaaccatttt-tctctccttcatttatatattt 46496150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 7785349 - 7785270
Alignment:
Q  156 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatact--taacaaaagcacttaaaacaatttt 233  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||  |||||| | |||||||||| |||||    
T  7785349 caattcaatatatttcactttacatttatgatagtggagaatgcatcaatacttataacaataacacttaaaactatttt 7785270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 233
Target Start/End: Original strand, 27831867 - 27831956
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatttt 233  Q
    |||||||||| |||||| ||||| || |||||||||||||| ||| ||| ||||||| |||||||| ||||  ||||||||||| |||||    
T  27831867 tttcatcactcccaattcaatatcttccactttgcatttatgataatggtgaatgcaccaatacttgacaagggcacttaaaactatttt 27831956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 34877189 - 34877088
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaatt 231  Q
    |||||||||| |||||||||||  ||||| ||||||||  ||||||||||||| ||| | || ||||||  |||| ||||| | ||||||||||||||||    
T  34877189 aattaatattattttcatcactcacaattcaatatattcaactttgcatttatgataatagaaaatgcacgaatatttaaccagagcacttaaaacaatt 34877090  T
Q  232 tt 233  Q
    ||    
T  34877089 tt 34877088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 256
Target Start/End: Complemental strand, 45889322 - 45889221
Alignment:
Q  157 aatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatcc-ttcatttatacat 254  Q
    |||| |||||||| |||||||||||||| ||| ||||||||  | ||||| ||||||| ||||||||||| || |||||||| ||| |||||||||||||    
T  45889322 aattcaatatattccactttgcatttatgataatggagaatagaccaatagttaacaagagcacttaaaaccatttttctctctcctttcatttatacat 45889223  T
Q  255 tt 256  Q
    ||    
T  45889222 tt 45889221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 296
Target Start/End: Original strand, 27391359 - 27391526
Alignment:
Q  135 taatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caatttt 233  Q
    |||||||  ||||| || || ||||| |||||||| |||||||||||||| ||| | |  |||| | |||||||||| || ||||||||||| || ||||    
T  27391359 taatattactttcaccattttcaattcaatatattccactttgcatttatgataatagtaaatgaaccaatacttaataagagcacttaaaatcattttt 27391458  T
Q  234 ctctatccttcatttatacatt-----taataaatgtgaaatgagcaaatgactaagtgaatttagga 296  Q
    |||| ||||||| |||||||||     |||||| |||||| ||| ||||||||| | | |||||||||    
T  27391459 ctctctccttcacttatacatttttcgtaataagtgtgaattgaacaaatgactcacttaatttagga 27391526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 307
Target Start/End: Original strand, 16040089 - 16040267
Alignment:
Q  135 taatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caatttt 233  Q
    |||||||  ||||| ||||||||||  ||||||||  ||||| ||||||| |||  | |||||| | ||||||||||||||  ||||||||| || ||||    
T  16040089 taatattactttcaccacttccaatacaatatattctactttacatttatgataaagaagaatgaaccaatacttaacaaagacacttaaaaccattttt 16040188  T
Q  234 ctctatccttcatttatacat-----ttaataaatgtgaaatgagcaaatgactaagtgaatttaggactgagggagta 307  Q
    |||| ||||| | | ||| ||     |||||||||||||||||||||||||||| | | || || |||| |||||||||    
T  16040189 ctctctccttgactaatatatttttcttaataaatgtgaaatgagcaaatgactcaattaaatttggacggagggagta 16040267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 21304393 - 21304487
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa 226  Q
    ||||||||||  ||||||||||   |||| ||||||||||||||||||||||| ||||| |||||||||   |||| |||||| | |||||||||    
T  21304393 aattaatattactttcatcactcttaattcaatatatttcactttgcatttatgatagtcgagaatgcactgatacataacaagatcacttaaaa 21304487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 51848782 - 51848665
Alignment:
Q  143 ttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatca--atacttaacaaaagcacttaaaac-aattttctctat 239  Q
    |||| |||| |||||||| |||||||| ||||||  |||||| |||||||||||| || ||  ||| ||||||| |||||||||||| | |||||| | |    
T  51848782 tttttatcatttccaattcaatatattccactttatatttatgatagtggagaatacaccaatatatttaacaatagcacttaaaactatttttctatct 51848683  T
Q  240 ccttcatttatacattta 257  Q
    || |||||||||||||||    
T  51848682 ccatcatttatacattta 51848665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 40019768 - 40019893
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaa-t 230  Q
    ||||||||||  ||||||||||   |||| ||||| ||||||||||  ||||| ||| ||| |||| ||  ||||||| |||| |||||||||||||| |    
T  40019768 aattaatattactttcatcactctgaattcaatatttttcactttgtctttatgataatggtgaatacacaaatacttgacaagagcacttaaaacaatt 40019867  T
Q  231 tttctctatccttcatttatacattt 256  Q
    ||||||| || |||| ||||||||||    
T  40019868 tttctctctcattcacttatacattt 40019893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 948686 - 948620
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatg 198  Q
    |||||||| | | ||||||||||  |||| |||||||| |||||||||||||| |||||||||||||    
T  948686 aattaatactatcttcatcactttgaattcaatatattccactttgcatttatgatagtggagaatg 948620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 41968232 - 41968170
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttat 184  Q
    ||||||||  ||||||||||  |||||||||||| ||||||||| |||||||||||| |||||    
T  41968232 ttataattctaattaatattactttcatcacttctaatttaataaatttcactttgcctttat 41968170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 46880448 - 46880546
Alignment:
Q  156 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttataca 253  Q
    ||||||||||||||  ||||| ||||||| |||||||||||  || | |||||||| || ||| || |||| || |||||||| |||||||||||||||    
T  46880448 caatttaatatattcaactttacatttatgatagtggagaagacaccgatacttaataagagctctcaaaatcatttttctctctccttcatttataca 46880546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 21304842 - 21304781
Alignment:
Q  195 aatgcatcaatacttaacaaaagcacttaaaacaattttctctatccttcatttatacattt 256  Q
    ||||||||||||||| |||||  |||| ||||||||||| ||| || |||||||||||||||    
T  21304842 aatgcatcaatacttgacaaagacactcaaaacaattttatctctctttcatttatacattt 21304781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 2571384 - 2571495
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattttctctatcctt 243  Q
    ||||||||||  ||||| ||||||||  ||||||||||||  |||    | |||||| ||||||||||||| | |||| ||||| ||||||||| || ||    
T  2571384 tttcatcactctcaattcaatatattctactttgcatttaggataagaaataatgcaccaatacttaacaaga-cactcaaaactattttctctctcttt 2571482  T
Q  244 catttatacattt 256  Q
    |||||||||||||    
T  2571483 catttatacattt 2571495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 45305852 - 45305944
Alignment:
Q  122 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 214  Q
    |||||| || |||||| ||| ||||||||| |  ||||| ||||||||  ||||||||||||| ||| || ||||||||| ||||||| ||||    
T  45305852 ttataactttaattaaaattattttcatcaatctcaattcaatatattctactttgcatttatgataatgaagaatgcataaatacttgacaa 45305944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 104
Target Start/End: Original strand, 17342774 - 17342813
Alignment:
Q  65 aaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    ||||||||||| || |||||||||||||||||||||||||    
T  17342774 aaaataactgagttatttcacttttcaatacaatattaat 17342813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 256
Target Start/End: Original strand, 28908150 - 28908223
Alignment:
Q  186 atagtggagaatgcatcaatacttaacaaaagcacttaaaacaattt---tctctatccttcatttatacattt 256  Q
    |||||||||||||||  |||||||||||| || ||||||||  ||||   ||||| ||||||||||||||||||    
T  28908150 atagtggagaatgcactaatacttaacaagagtacttaaaatcatttttctctctctccttcatttatacattt 28908223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 277
Target Start/End: Original strand, 34813950 - 34814077
Alignment:
Q  156 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatccttcatttatacat 254  Q
    ||||| ||||||||  ||||||||||||| ||| ||   ||||||  |||||||||||| | |||||||||| | |||||||| ||||||| | ||||||    
T  34813950 caattcaatatattctactttgcatttatgataatgataaatgcactaatacttaacaagaacacttaaaactatttttctctctccttcactaatacat 34814049  T
Q  255 -----ttaataaatgtgaaatgagcaaa 277  Q
         ||||||| |||||||||||||||    
T  34814050 ttttcttaataagtgtgaaatgagcaaa 34814077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 914756 - 914834
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatactta 210  Q
    ||||||||||  |||||||| |  ||||| ||||| || ||||||| |||||||||| | | |||||||||||||||||    
T  914756 aattaatattaatttcatcattctcaattcaatatcttccactttgtatttataatattcgtgaatgcatcaatactta 914834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 29225495 - 29225413
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa 226  Q
    ||||| ||||||||||| ||||||||  ||||| ||||||| |||    |||||||| |||||||||||||| ||||| ||||    
T  29225495 tttcaccacttccaattcaatatattctactttccatttatgataaaaaagaatgcaccaatacttaacaaaggcactcaaaa 29225413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 30903326 - 30903244
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 214  Q
    |||||||||| ||||||||||| |   || ||||||||  ||||||||||||| ||| |||| ||||||  ||||||||||||    
T  30903326 aattaatattattttcatcactcctgtttcaatatattctactttgcatttatgataatggaaaatgcacaaatacttaacaa 30903244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 37525111 - 37525172
Alignment:
Q  194 gaatgcatcaatacttaacaaaagcacttaaaacaattttctctatccttcatttatacattt 256  Q
    |||||||| ||||||||||||  ||| ||||||| ||||| ||| ||||||||||||||||||    
T  37525111 gaatgcattaatacttaacaagtgcatttaaaactatttt-tctctccttcatttatacattt 37525172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 7787710 - 7787771
Alignment:
Q  171 cactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacaattt 232  Q
    |||||| ||||||| |||||||||||| || |||||||||||||  | ||||||||| ||||    
T  7787710 cactttacatttatgatagtggagaatacaccaatacttaacaagtgtacttaaaactattt 7787771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 34877253 - 34877212
Alignment:
Q  63 ctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||||||||  ||| |||||||||||||||||||||    
T  34877253 ctaaaataactgaatcattttacttttcaatacaatattaat 34877212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 52382485 - 52382408
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatactt 209  Q
    ||||||||||  ||||| ||||  ||||| ||||||||| ||||| ||||||| |||  | |||||||||||||||||    
T  52382485 aattaatattactttcaccactctcaattcaatatattttactttacatttatgataaagaagaatgcatcaatactt 52382408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 11426036 - 11425992
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||||||||| |  ||||||||| |||||||||||||||    
T  11426036 gtcctaaaataactgagtcatttcactttccaatacaatattaat 11425992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 27698753 - 27698797
Alignment:
Q  60 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 104  Q
    |||||||||||| ||| |  |||||||||||||||||||||||||    
T  27698753 gtcctaaaataattgagtcatttcacttttcaatacaatattaat 27698797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 118 - 256
Target Start/End: Original strand, 229818 - 229956
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||||| |  |||||  |||||||||| |||||||  |||||||||||||| ||| ||||||||||| ||||||||||||| ||    
T  229818 ccctttataactctaattaatactactttcacaacttccaattcaatatataccactttgcatttatgataatggagaatgcaccaatacttaacaagag 229917  T
Q  218 cacttaaaacaattttctctatccttcatttatacattt 256  Q
    ||||||||||| |||||| | ||||||||||||||||||    
T  229918 cacttaaaacatttttctatctccttcatttatacattt 229956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 118 - 256
Target Start/End: Original strand, 98820 - 98959
Alignment:
Q  118 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 217  Q
    |||||||||| |  |||||||||| |||||||||||  ||||| |||||||| ||||||  |||||| || ||||| |||||| ||||||||| ||| ||    
T  98820 ccctttataactctaattaatattattttcatcactctcaattcaatatattccactttatatttattatggtggataatgcaccaatacttatcaagag 98919  T
Q  218 cacttaaaa-caattttctctatccttcatttatacattt 256  Q
    ||||||||| || |||||||| || |||||||||||||||    
T  98920 cacttaaaatcatttttctctctcattcatttatacattt 98959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 9617 - 9529
Alignment:
Q  165 atatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caattttctctatccttcatttatac 252  Q
    ||||| |||||||||||||| ||| |||||||| ||| |||||||||||| ||||||||||| || |||||||| ||||||||||||||    
T  9617 atattccactttgcatttatgataatggagaatacattaatacttaacaagagcacttaaaaccatttttctctctccttcatttatac 9529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 119 - 213
Target Start/End: Original strand, 8883 - 8977
Alignment:
Q  119 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaaca 213  Q
    ||||||||| |  ||||||||||  |||||||| |  ||||| |||||||| |||||||||||||||||||||||||||||| |||||| |||||    
T  8883 cctttataactctaattaatattactttcatcattctcaattcaatatattccactttgcatttataatagtggagaatgcaccaatacataaca 8977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 14477 - 14590
Alignment:
Q  144 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac-aattttctctatcct 242  Q
    |||||||| || ||||| |||||||| |||||| ||||||| | ||||||||||||||||||||||| |||  ||| ||||||| | |||| |||  |||    
T  14477 tttcatcattttcaattcaatatattccactttacatttatgacagtggagaatgcatcaatacttagcaagtgcaattaaaactatttttatctcccct 14576  T
Q  243 tcatttatacattt 256  Q
    ||||||||||||||    
T  14577 tcatttatacattt 14590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 121 - 256
Target Start/End: Original strand, 26611 - 26740
Alignment:
Q  121 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcac 220  Q
    |||||||||  |||||||| |  ||||||||||  ||||| |||||||| |||||||||||||| ||||||||||||  | ||||||||||| | |||||    
T  26611 tttataattctaattaatactactttcatcactcgcaattcaatatattccactttgcatttatgatagtggagaatagaccaatacttaaccagagcac 26710  T
Q  221 ttaaaacaattttctctatccttcatttatacattt 256  Q
          || |||||||| ||||||||||||||||||    
T  26711 ------catttttctctctccttcatttatacattt 26740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 230265 - 230389
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-caat 230  Q
    ||||||||||  |||||  |||||||||| |||||||| || ||||||||||| |||   ||||||| | | || |||||||| |  |||||||| || |    
T  230265 aattaatattactttcacaacttccaattcaatatattccattttgcatttatgataacagagaatgtacccatgcttaacaagaatacttaaaaccatt 230364  T
Q  231 tttctctatccttcatttatacatt 255  Q
    ||||||| | |||||||||||||||    
T  230365 tttctctcttcttcatttatacatt 230389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 6498 - 6421
Alignment:
Q  132 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatactt 209  Q
    ||||||||||  ||||| ||||  ||||| ||||||||| ||||| ||||||| |||  | |||||||||||||||||    
T  6498 aattaatattactttcaccactctcaattcaatatattttactttacatttatgataaagaagaatgcatcaatactt 6421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University