View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13584_high_5 (Length: 393)
Name: NF13584_high_5
Description: NF13584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13584_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 3e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 133 - 377
Target Start/End: Complemental strand, 41597820 - 41597575
Alignment:
| Q |
133 |
ataataacacaaacatacggaaaataatatcatgttaattagtatgttataaagggagtcacagatccaattgtattaatttcacacactaaataaaata |
232 |
Q |
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| T |
41597820 |
ataataacacaaacatacggaaaataatatcatgttaattaatatgttatgaagggagtcactgatccaattgtattaatttcacacactaaataaaata |
41597721 |
T |
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| Q |
233 |
ataagagtacactctatacttatcttttgaagtcattctctttaggttgatttcatatttttgaataacatnnnnnnnnnntatatctctga----ttat |
328 |
Q |
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| T |
41597720 |
ataagagtacactctatatttatcttttgaagtcattctctttaggttgatttcatatttttgaataacataaaaaaaagtt---tctctgataagttat |
41597624 |
T |
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| Q |
329 |
taatattgtcacaagtacatatatttgaagggtatttgtacgtaccttt |
377 |
Q |
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| T |
41597623 |
taatattgtcacaagtacatatatttgaagggtatttgtacgtaccttt |
41597575 |
T |
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