View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13584_low_11 (Length: 265)
Name: NF13584_low_11
Description: NF13584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13584_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 778480 - 778248
Alignment:
| Q |
14 |
gaagtaaaattgtgagaatgagaattttgaaaagggtgaaattttggtttggttatgtggtttgaaagatgtaaggttgaagaagaaggtgagacataga |
113 |
Q |
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| T |
778480 |
gaagaaaaattgtgagaatgagaattttgaaaagggtgaaattttggtttggttatgtggtttgaaagatgtaaggttgaagaagaaggtgagacataga |
778381 |
T |
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| Q |
114 |
gattgtgcatgttgaggtttgatgagagaaaataaggagacatagttgtttgttgcatgaagtgaaagacacagaaaaaggttgnnnnnnnnatgttgtc |
213 |
Q |
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| T |
778380 |
gattgtgcatgttgaggtttgatgagagaaaataaggagacatagttgtttgttgcatgaagtgaaagacacagaaaaaggttgttttttttatgttgtc |
778281 |
T |
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| Q |
214 |
tgattctgacatgtgacattcaaaatggtaaat |
246 |
Q |
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| T |
778280 |
tgattctgacatgtgacaatcaaaatggtaaat |
778248 |
T |
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