View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13584_low_12 (Length: 241)
Name: NF13584_low_12
Description: NF13584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13584_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 10972183 - 10971953
Alignment:
| Q |
1 |
acaccgtatggttggttaccttgaggaggaagctattcactcatacactgagtttctcaaggaacttgataaaggcaacatcgaaaacgttcctgctcca |
100 |
Q |
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| T |
10972183 |
acaccgtatggttggttaccttgaggaggaagctattcactcatacactgagtttctcaaggaacttgataaaggcaacatcgaaaacgttcctgctcca |
10972084 |
T |
|
| Q |
101 |
gctattgctattgactattggcagcttccccaaaactctactttaagggatgttgtagaggttgtcagagctgatgaagcacatcatcgcgatgttaacc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10972083 |
gctattgctattgactattggcagcttccccaaaactctactttaagggatgttgtagaggttgtcagagctgatgaagcacatcatcgcgatgttaacc |
10971984 |
T |
|
| Q |
201 |
actttgcatcggtatgttgtctatccctttg |
231 |
Q |
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| ||||| ||||||||||||||||||||||| |
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| T |
10971983 |
attttgcttcggtatgttgtctatccctttg |
10971953 |
T |
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