View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13584_low_4 (Length: 426)
Name: NF13584_low_4
Description: NF13584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13584_low_4 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 386; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 8 - 413
Target Start/End: Original strand, 34066599 - 34067004
Alignment:
| Q |
8 |
tgaaatgaacaaagaaaaccaaacagtttgttacttcaaaataccaccagaaaatggcatcactaccctaaaacaacctcctagctgtagagtagttttc |
107 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34066599 |
tgaaaagaacaaagaaaaccaaacagtttgttacttcaaaataccaccagaaaatggcatctctaccctaaaacaacctcctagctgtagagtagttttc |
34066698 |
T |
|
| Q |
108 |
ttgctcatccaattaggaagataactaattgtcctaatttcatcgaacctgacttttggcaggttggggaatttaagagaaatgtattcatttcctaaca |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34066699 |
ttgctcatccaattaggaagataactaattgtcctaatttcatcgaacctgacttttggcaggttggggaatttaagagaaatgtattcatttcctaaca |
34066798 |
T |
|
| Q |
208 |
actaattcaaccacatgcaagcttttggatggaagaacatcatagaaaatgcagggttagaacatacaataaacatcaaatttaacacttcaggttcata |
307 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34066799 |
actaattctaccacatgcaaacttttggatggaagaacatcatagaaaatgcagggttagaacatacaataaacatcaaatttaacacttcaggttcata |
34066898 |
T |
|
| Q |
308 |
aaatagggcaaaattactgtctactaccttgatctgctgctcttctggagataaaatcttttcaagtatactatctctcaatctcctaaatgacatcttt |
407 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34066899 |
aaatagggcaaaattactgtctagtaccttgatctgctgctcttctggagataaaatcttttcaagtatactatctctcaatctcctaaatgacatcttt |
34066998 |
T |
|
| Q |
408 |
cttttc |
413 |
Q |
| |
|
|||||| |
|
|
| T |
34066999 |
cttttc |
34067004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University