View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13585_low_7 (Length: 470)

Name: NF13585_low_7
Description: NF13585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13585_low_7
NF13585_low_7
[»] chr4 (48 HSPs)
chr4 (306-448)||(20086090-20086232)
chr4 (101-227)||(20086311-20086439)
chr4 (27-101)||(20086473-20086547)
chr4 (30-101)||(12691442-12691513)
chr4 (30-101)||(53559664-53559735)
chr4 (30-101)||(54961467-54961538)
chr4 (30-101)||(12691682-12691753)
chr4 (30-101)||(22249769-22249840)
chr4 (13-100)||(33294403-33294490)
chr4 (30-101)||(47862188-47862259)
chr4 (30-101)||(47980721-47980792)
chr4 (30-100)||(13872346-13872416)
chr4 (27-101)||(22250007-22250081)
chr4 (30-100)||(47981913-47981983)
chr4 (20-101)||(50245893-50245974)
chr4 (13-101)||(47862412-47862500)
chr4 (30-101)||(8287210-8287281)
chr4 (30-101)||(19916692-19916763)
chr4 (30-100)||(34238507-34238577)
chr4 (35-101)||(37678130-37678196)
chr4 (35-101)||(50246140-50246206)
chr4 (30-101)||(26601353-26601424)
chr4 (30-101)||(37677884-37677955)
chr4 (30-101)||(54961708-54961779)
chr4 (30-100)||(33294181-33294251)
chr4 (13-100)||(13872106-13872193)
chr4 (35-101)||(35730943-35731009)
chr4 (30-84)||(53559440-53559494)
chr4 (20-101)||(48507684-48507765)
chr4 (35-97)||(45199167-45199229)
chr4 (30-101)||(27813330-27813401)
chr4 (30-93)||(52339239-52339302)
chr4 (35-101)||(8286968-8287034)
chr4 (67-101)||(19740896-19740930)
chr4 (35-101)||(19916938-19917004)
chr4 (35-101)||(32846398-32846464)
chr4 (27-101)||(53475867-53475941)
chr4 (35-99)||(489466-489530)
chr4 (35-99)||(515258-515322)
chr4 (70-101)||(8287056-8287087)
chr4 (70-101)||(12691530-12691561)
chr4 (70-101)||(34238594-34238625)
chr4 (70-101)||(37678077-37678108)
chr4 (70-101)||(47862276-47862307)
chr4 (70-101)||(48507538-48507569)
chr4 (70-101)||(53559511-53559542)
chr4 (35-101)||(53477078-53477144)
chr4 (70-99)||(20086668-20086697)
[»] chr2 (52 HSPs)
chr2 (13-101)||(16366999-16367087)
chr2 (30-101)||(20911166-20911237)
chr2 (30-101)||(1149973-1150044)
chr2 (30-101)||(16367240-16367311)
chr2 (30-100)||(45663785-45663855)
chr2 (13-101)||(1150197-1150285)
chr2 (37-101)||(10446868-10446932)
chr2 (30-101)||(19606953-19607024)
chr2 (30-101)||(32519432-32519503)
chr2 (20-101)||(32519191-32519272)
chr2 (29-101)||(41846428-41846500)
chr2 (30-101)||(8089488-8089559)
chr2 (30-101)||(22731809-22731880)
chr2 (30-100)||(17580365-17580435)
chr2 (35-101)||(22309713-22309779)
chr2 (13-101)||(20911390-20911477)
chr2 (30-101)||(18476943-18477014)
chr2 (30-101)||(22309467-22309538)
chr2 (35-101)||(41846674-41846740)
chr2 (30-95)||(17366899-17366964)
chr2 (30-101)||(4375828-4375899)
chr2 (30-101)||(9693778-9693849)
chr2 (35-101)||(9694024-9694090)
chr2 (30-101)||(8089730-8089798)
chr2 (37-101)||(17366662-17366726)
chr2 (13-101)||(28599687-28599775)
chr2 (30-101)||(19620786-19620857)
chr2 (30-92)||(5608637-5608699)
chr2 (35-101)||(9959107-9959173)
chr2 (35-101)||(28599463-28599529)
chr2 (30-101)||(9958861-9958932)
chr2 (30-101)||(37985004-37985075)
chr2 (30-101)||(43681892-43681963)
chr2 (42-101)||(17580613-17580673)
chr2 (70-101)||(1150061-1150092)
chr2 (70-101)||(16367192-16367223)
chr2 (62-101)||(17285044-17285083)
chr2 (70-101)||(17366750-17366781)
chr2 (70-101)||(17580452-17580483)
chr2 (70-101)||(20911254-20911285)
chr2 (70-101)||(32519279-32519310)
chr2 (70-101)||(41846621-41846652)
chr2 (30-101)||(43236540-43236611)
chr2 (70-100)||(4375673-4375703)
chr2 (64-94)||(10446929-10446959)
chr2 (59-101)||(11830266-11830308)
chr2 (40-98)||(13646119-13646177)
chr2 (40-98)||(13652096-13652154)
chr2 (67-101)||(24607950-24607984)
chr2 (70-100)||(43682087-43682117)
chr2 (64-101)||(17284779-17284816)
chr2 (37-101)||(18477160-18477224)
[»] scaffold1493 (3 HSPs)
scaffold1493 (30-101)||(870-941)
scaffold1493 (20-101)||(629-710)
scaffold1493 (70-101)||(822-853)
[»] chr8 (59 HSPs)
chr8 (30-101)||(25287828-25287899)
chr8 (30-101)||(40525543-40525614)
chr8 (30-101)||(41801852-41801923)
chr8 (30-101)||(7670-7741)
chr8 (30-101)||(11478181-11478252)
chr8 (30-101)||(11478422-11478493)
chr8 (30-101)||(23424789-23424860)
chr8 (30-101)||(27857019-27857090)
chr8 (30-101)||(36623388-36623459)
chr8 (30-101)||(41182173-41182244)
chr8 (30-101)||(43866988-43867059)
chr8 (27-101)||(29190433-29190507)
chr8 (30-100)||(40525784-40525854)
chr8 (20-92)||(27856787-27856859)
chr8 (13-97)||(29190200-29190284)
chr8 (30-101)||(547466-547537)
chr8 (30-101)||(547712-547783)
chr8 (30-101)||(20096056-20096127)
chr8 (30-101)||(36623630-36623701)
chr8 (30-101)||(37342818-37342889)
chr8 (30-101)||(37343059-37343130)
chr8 (30-101)||(38619834-38619905)
chr8 (30-101)||(43866747-43866818)
chr8 (35-101)||(40422442-40422508)
chr8 (30-98)||(31690173-31690241)
chr8 (30-98)||(41251162-41251230)
chr8 (30-101)||(22763873-22763944)
chr8 (30-101)||(23424548-23424619)
chr8 (34-101)||(26739753-26739820)
chr8 (30-97)||(40422200-40422267)
chr8 (20-101)||(26739984-26740066)
chr8 (30-101)||(20096298-20096372)
chr8 (30-101)||(7429-7500)
chr8 (30-101)||(41251403-41251474)
chr8 (35-101)||(9632364-9632430)
chr8 (30-101)||(35163533-35163604)
chr8 (35-101)||(22763631-22763697)
chr8 (35-101)||(31689931-31689997)
chr8 (20-101)||(25288059-25288140)
chr8 (62-101)||(9632612-9632651)
chr8 (34-97)||(41802097-41802160)
chr8 (35-101)||(4970161-4970227)
chr8 (43-101)||(24529946-24530004)
chr8 (66-101)||(15716189-15716224)
chr8 (70-101)||(23424636-23424667)
chr8 (35-86)||(24529729-24529780)
chr8 (70-101)||(25287916-25287947)
chr8 (70-101)||(31690019-31690050)
chr8 (30-101)||(38600227-38600298)
chr8 (70-101)||(40422389-40422420)
chr8 (70-101)||(40525631-40525662)
chr8 (35-101)||(7393143-7393209)
chr8 (70-100)||(22763719-22763749)
chr8 (30-103)||(36574851-36574924)
chr8 (35-101)||(37713732-37713798)
chr8 (35-101)||(38599000-38599066)
chr8 (70-99)||(27436601-27436630)
chr8 (70-99)||(27437552-27437581)
chr8 (73-101)||(41182023-41182051)
[»] chr7 (38 HSPs)
chr7 (30-101)||(43938171-43938242)
chr7 (13-101)||(26825666-26825754)
chr7 (13-101)||(43937930-43938018)
chr7 (30-101)||(12931015-12931086)
chr7 (20-101)||(34454747-34454828)
chr7 (13-101)||(37563390-37563478)
chr7 (30-101)||(37563631-37563702)
chr7 (20-101)||(26825897-26825978)
chr7 (30-101)||(12929531-12929602)
chr7 (30-101)||(34454520-34454591)
chr7 (35-101)||(20947229-20947295)
chr7 (20-101)||(12928306-12928387)
chr7 (34-98)||(12928076-12928139)
chr7 (30-101)||(12930808-12930879)
chr7 (30-101)||(35262662-35262733)
chr7 (35-101)||(5280553-5280619)
chr7 (34-100)||(5636306-5636372)
chr7 (20-101)||(15827757-15827838)
chr7 (30-101)||(7159206-7159276)
chr7 (30-101)||(27558129-27558200)
chr7 (35-101)||(5280308-5280374)
chr7 (30-100)||(12929324-12929394)
chr7 (20-101)||(47081883-47081964)
chr7 (29-101)||(25049437-25049509)
chr7 (66-101)||(44545908-44545943)
chr7 (30-101)||(47121555-47121626)
chr7 (35-101)||(5636062-5636127)
chr7 (30-100)||(20947471-20947541)
chr7 (30-100)||(23191131-23191200)
chr7 (70-103)||(37563581-37563614)
chr7 (70-101)||(15827950-15827981)
chr7 (70-101)||(26825859-26825890)
chr7 (70-101)||(34454709-34454740)
chr7 (70-101)||(43938123-43938154)
chr7 (71-101)||(5636150-5636180)
chr7 (35-101)||(7158267-7158333)
chr7 (35-101)||(27557884-27557950)
chr7 (40-98)||(47739000-47739058)
[»] chr6 (47 HSPs)
chr6 (30-101)||(13480244-13480315)
chr6 (13-101)||(13480468-13480556)
chr6 (30-101)||(5064612-5064683)
chr6 (30-101)||(20994968-20995039)
chr6 (30-101)||(23291780-23291851)
chr6 (30-101)||(23292021-23292092)
chr6 (30-101)||(32337600-32337671)
chr6 (30-99)||(30234869-30234938)
chr6 (13-101)||(5064371-5064459)
chr6 (13-101)||(22494140-22494228)
chr6 (13-101)||(32337827-32337915)
chr6 (30-101)||(21880400-21880471)
chr6 (30-100)||(21880641-21880711)
chr6 (13-101)||(15819750-15819838)
chr6 (30-101)||(737974-738045)
chr6 (30-101)||(9607593-9607664)
chr6 (30-101)||(20561204-20561275)
chr6 (30-101)||(22493917-22493987)
chr6 (30-101)||(20560964-20561035)
chr6 (30-101)||(20994855-20994925)
chr6 (30-101)||(26503631-26503702)
chr6 (35-101)||(3299841-3299907)
chr6 (30-101)||(3299595-3299666)
chr6 (62-101)||(15819604-15819643)
chr6 (35-101)||(26542652-26542719)
chr6 (30-100)||(7612826-7612896)
chr6 (59-101)||(16704615-16704657)
chr6 (13-101)||(20774341-20774429)
chr6 (30-101)||(8427236-8427307)
chr6 (35-101)||(1066421-1066487)
chr6 (35-101)||(7612584-7612650)
chr6 (59-101)||(16706957-16706999)
chr6 (35-101)||(19296509-19296575)
chr6 (32-101)||(3586247-3586316)
chr6 (13-101)||(26542880-26542968)
chr6 (70-101)||(21880593-21880624)
chr6 (70-101)||(23291868-23291899)
chr6 (70-101)||(26503488-26503519)
chr6 (70-101)||(26542741-26542772)
chr6 (30-101)||(31879735-31879806)
chr6 (71-101)||(5064564-5064594)
chr6 (71-101)||(13480333-13480363)
chr6 (35-101)||(20774125-20774191)
chr6 (70-100)||(22494004-22494034)
chr6 (35-101)||(31879493-31879559)
chr6 (37-101)||(17784385-17784449)
chr6 (41-101)||(18865156-18865216)
[»] chr5 (45 HSPs)
chr5 (30-101)||(32052501-32052572)
chr5 (30-101)||(33735590-33735661)
chr5 (30-101)||(14745484-14745555)
chr5 (30-101)||(25253122-25253193)
chr5 (30-101)||(25316912-25316983)
chr5 (30-101)||(32052260-32052331)
chr5 (30-101)||(37945030-37945101)
chr5 (20-101)||(18013648-18013729)
chr5 (20-101)||(33735349-33735430)
chr5 (13-101)||(13064669-13064757)
chr5 (13-101)||(25253346-25253434)
chr5 (13-101)||(25317137-25317225)
chr5 (30-101)||(12991065-12991136)
chr5 (30-101)||(14745590-14745661)
chr5 (35-99)||(7015791-7015855)
chr5 (30-98)||(37945271-37945339)
chr5 (30-101)||(6421899-6421970)
chr5 (30-98)||(27753517-27753585)
chr5 (30-101)||(7015544-7015615)
chr5 (35-100)||(27753761-27753826)
chr5 (13-101)||(20704973-20705060)
chr5 (30-101)||(6421658-6421729)
chr5 (35-101)||(21260901-21260967)
chr5 (35-101)||(22024152-22024218)
chr5 (20-101)||(18013879-18013959)
chr5 (30-101)||(41339390-41339461)
chr5 (35-101)||(8323092-8323158)
chr5 (30-101)||(14744723-14744794)
chr5 (30-101)||(22533426-22533497)
chr5 (30-100)||(8323333-8323403)
chr5 (20-94)||(18934981-18935055)
chr5 (35-101)||(34404520-34404585)
chr5 (68-101)||(16117997-16118030)
chr5 (70-101)||(6421851-6421882)
chr5 (70-101)||(18013736-18013767)
chr5 (30-101)||(20704773-20704844)
chr5 (70-101)||(22533619-22533650)
chr5 (66-101)||(22533703-22533738)
chr5 (70-101)||(32052453-32052484)
chr5 (70-101)||(33735542-33735573)
chr5 (67-101)||(18934749-18934783)
chr5 (71-100)||(12628340-12628369)
chr5 (30-99)||(39402141-39402210)
chr5 (29-101)||(147382-147454)
chr5 (73-101)||(41339583-41339611)
[»] chr3 (39 HSPs)
chr3 (30-101)||(10998150-10998221)
chr3 (30-101)||(1741423-1741494)
chr3 (30-101)||(10749354-10749425)
chr3 (30-101)||(30804125-30804196)
chr3 (30-100)||(22129043-22129113)
chr3 (30-100)||(40256911-40256981)
chr3 (13-101)||(11312771-11312859)
chr3 (13-101)||(55036929-55037017)
chr3 (30-101)||(33458195-33458266)
chr3 (30-100)||(40257150-40257220)
chr3 (27-100)||(51279268-51279341)
chr3 (13-101)||(10749656-10749744)
chr3 (37-101)||(55036705-55036769)
chr3 (13-84)||(10749579-10749650)
chr3 (30-101)||(22129286-22129357)
chr3 (30-101)||(33989296-33989367)
chr3 (34-101)||(53037063-53037130)
chr3 (30-101)||(53037304-53037375)
chr3 (30-100)||(21300410-21300480)
chr3 (30-101)||(10997913-10997981)
chr3 (30-101)||(11313012-11313082)
chr3 (35-101)||(30803882-30803948)
chr3 (35-99)||(33989052-33989116)
chr3 (30-101)||(30890484-30890555)
chr3 (30-100)||(35432627-35432697)
chr3 (30-101)||(46670284-46670355)
chr3 (35-101)||(30654762-30654827)
chr3 (20-101)||(28310384-28310465)
chr3 (30-98)||(24576572-24576640)
chr3 (37-101)||(46670539-46670603)
chr3 (70-101)||(11312964-11312995)
chr3 (70-101)||(22129130-22129161)
chr3 (70-101)||(30890331-30890362)
chr3 (70-101)||(51279459-51279490)
chr3 (70-101)||(53037151-53037182)
chr3 (70-101)||(55036793-55036824)
chr3 (59-101)||(24576324-24576366)
chr3 (35-101)||(33457952-33458018)
chr3 (30-99)||(30654522-30654591)
[»] chr1 (61 HSPs)
chr1 (27-101)||(37152812-37152886)
chr1 (13-101)||(1047464-1047552)
chr1 (30-101)||(1040334-1040405)
chr1 (30-101)||(1047240-1047311)
chr1 (30-101)||(2953741-2953812)
chr1 (13-100)||(26953138-26953225)
chr1 (30-101)||(29043032-29043103)
chr1 (30-101)||(49002912-49002983)
chr1 (20-101)||(5926555-5926636)
chr1 (13-101)||(2953500-2953588)
chr1 (13-101)||(5183542-5183630)
chr1 (30-101)||(739255-739326)
chr1 (30-101)||(5183783-5183854)
chr1 (30-101)||(19755682-19755753)
chr1 (30-101)||(25414880-25414951)
chr1 (30-101)||(33347693-33347764)
chr1 (30-101)||(46849935-46850006)
chr1 (30-101)||(739495-739566)
chr1 (30-101)||(12577289-12577360)
chr1 (30-101)||(29980675-29980746)
chr1 (30-101)||(29980915-29980986)
chr1 (30-101)||(33347452-33347523)
chr1 (30-101)||(37152574-37152645)
chr1 (30-101)||(49003152-49003223)
chr1 (20-101)||(33030602-33030683)
chr1 (30-101)||(5926798-5926869)
chr1 (30-101)||(6056412-6056483)
chr1 (30-101)||(12577046-12577117)
chr1 (30-101)||(24701306-24701377)
chr1 (30-101)||(25415121-25415192)
chr1 (30-101)||(37152469-37152540)
chr1 (30-101)||(46364610-46364681)
chr1 (35-101)||(33030370-33030436)
chr1 (30-100)||(46364852-46364922)
chr1 (34-101)||(6056659-6056727)
chr1 (30-101)||(26953378-26953449)
chr1 (30-101)||(29042791-29042862)
chr1 (30-101)||(46849694-46849765)
chr1 (30-101)||(48380960-48381031)
chr1 (13-100)||(49990056-49990143)
chr1 (35-101)||(46545013-46545079)
chr1 (35-101)||(48380717-48380783)
chr1 (13-101)||(8890248-8890335)
chr1 (35-101)||(10019655-10019721)
chr1 (31-101)||(35312010-35312080)
chr1 (64-101)||(24701580-24701617)
chr1 (30-101)||(6334692-6334763)
chr1 (30-101)||(30830166-30830237)
chr1 (30-93)||(49989839-49989902)
chr1 (35-101)||(8890491-8890557)
chr1 (35-100)||(35312258-35312323)
chr1 (35-100)||(52455037-52455102)
chr1 (37-101)||(6345637-6345701)
chr1 (70-101)||(1040422-1040453)
chr1 (70-101)||(1047328-1047359)
chr1 (70-101)||(6056500-6056531)
chr1 (70-101)||(12577241-12577272)
chr1 (70-101)||(19755634-19755665)
chr1 (70-101)||(46364804-46364835)
chr1 (70-101)||(46849887-46849918)
chr1 (73-101)||(33347645-33347673)
[»] scaffold0206 (1 HSPs)
scaffold0206 (30-101)||(10361-10432)
[»] scaffold0233 (2 HSPs)
scaffold0233 (35-101)||(8469-8535)
scaffold0233 (30-101)||(8709-8780)
[»] scaffold0201 (2 HSPs)
scaffold0201 (30-101)||(14170-14241)
scaffold0201 (30-100)||(13930-14000)
[»] scaffold0321 (3 HSPs)
scaffold0321 (30-101)||(10698-10769)
scaffold0321 (30-101)||(10939-11010)
scaffold0321 (70-101)||(10786-10817)
[»] scaffold0202 (2 HSPs)
scaffold0202 (30-101)||(14511-14582)
scaffold0202 (35-101)||(14271-14337)
[»] scaffold0279 (2 HSPs)
scaffold0279 (30-101)||(10889-10960)
scaffold0279 (35-101)||(11139-11205)
[»] scaffold0009 (2 HSPs)
scaffold0009 (30-101)||(261037-261108)
scaffold0009 (37-101)||(262441-262505)
[»] scaffold0022 (1 HSPs)
scaffold0022 (20-101)||(120467-120546)


Alignment Details
Target: chr4 (Bit Score: 118; Significance: 5e-60; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 306 - 448
Target Start/End: Complemental strand, 20086232 - 20086090
Alignment:
Q  306 cactcatttcatcacaaagttcagatctttgaattcattttctcnnnnnnntgagagacaaattttcatgttttagtgaaaattcaataaatgtctcaaa 405  Q
    ||||||||||| ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20086232 cactcatttcaccacaaagttcagatctttgaattcattttctcaaaaaaatgagagacaaattttcatgttttagtgaaaattcaataaatgtctcaaa 20086133  T
Q  406 tgcttcatgttctagctattcaaacaacacatgcatttcacca 448  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  20086132 tgcttcatgttctagctattcaaacaacacatgcatttcacca 20086090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 20086439 - 20086311
Alignment:
Q  101 gcctaatataaaataaaattcacattattataagaagatnnnnnnnnnnnnnna--taaagatagtattaaatggaaatgaatatgcatagaaaccggct 198  Q
    |||||||||||||||||||||||||||||||||||||||              |  ||||||||||||||||||||||||||||||||||||||||||||    
T  20086439 gcctaatataaaataaaattcacattattataagaagatgagagagagagagaaaataaagatagtattaaatggaaatgaatatgcatagaaaccggct 20086340  T
Q  199 tcattagctttcatcatctcatttatttc 227  Q
    |||||||||||||||||||||||||||||    
T  20086339 tcattagctttcatcatctcatttatttc 20086311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 20086547 - 20086473
Alignment:
Q  27 actaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20086547 actaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatg 20086473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 12691513 - 12691442
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||    
T  12691513 aaaagtcaaatgattaatatttgtagggacagattggaaggattagtaacttcagggacgaaaattcaaatg 12691442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 53559664 - 53559735
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  53559664 aaaagtcaaatgattaatatttgcaggggcagattggaacgattagtaacttcagggacgaaaattcaaatg 53559735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 54961538 - 54961467
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  54961538 aaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatg 54961467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 12691682 - 12691753
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||| ||||||||||||    
T  12691682 aaaagtcaaatgattaatatttgcaggggcggattggaaggattagtaacttcagggacaaaaattcaaatg 12691753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 22249840 - 22249769
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||||||||||||||||    
T  22249840 aaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcatggacgaaaattcaaatg 22249769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 33294403 - 33294490
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||| |||||  || |||| ||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  33294403 aaaatctaattaggaccaaaaatcaaatgattaatatttgcaggggcagatcggaaggattagtaacttcagggacgaaaattcaaat 33294490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 47862259 - 47862188
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  47862259 aaaagtcaaatgattagtatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatg 47862188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 47980792 - 47980721
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| |||||||  ||||||||||||| ||||||||||||||||||||||||||||    
T  47980792 aaaagtcaaatgattaatatttgcagggatagattggaaggatcagtaacttcagggacgaaaattcaaatg 47980721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 13872346 - 13872416
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||    
T  13872346 aaaagtcaaatgattaatatttgcaggggcagattggaagaattagtaacttcagggacaaaaattcaaat 13872416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 22250007 - 22250081
Alignment:
Q  27 actaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||| ||||||| || |||||||| |||||||| ||||||||||||||||||||||    
T  22250007 actaaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatg 22250081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 47981913 - 47981983
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  47981913 aaaaatcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaat 47981983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 50245974 - 50245893
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| ||||||||||||||||||||||| ||||| | |||||||||| |||||||||||||| ||| |||||||||||||    
T  50245974 aattaagactaaaagtcaaatgattaatatttgcagtggcagattggaatgattagtaacttcatggatgaaaattcaaatg 50245893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 47862412 - 47862500
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||||||| ||||||| || ||| |||||||||||||||||| |||||||||||||||||    
T  47862412 aaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcaaattagaaggattagtaacttcatggacgaaaattcaaatg 47862500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 8287210 - 8287281
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||  | ||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  8287210 aaaagtcaaatgattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatg 8287281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 19916763 - 19916692
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||| | |||||||||||||||||||||||||||| |||||||| |||||    
T  19916763 aaaagtcaaatgattaatatttgcagtggcagattggaaggattagtaacttcaggggcgaaaatttaaatg 19916692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 34238577 - 34238507
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||||||||||| ||||||| || |||| |||||||||||||||||| |||||||||||||||    
T  34238577 aaaagtcaaatgattaatatttgcaggggcatattgaaaggattagtaacttcagagacgaaaattcaaat 34238507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 37678130 - 37678196
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||| |||||    
T  37678130 tcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaatttaaatg 37678196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 50246140 - 50246206
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||| | ||||||||||||||||||||||||| |||||||||||||||||    
T  50246140 tcaaatgattaatatttgcagtgacagattggaaggattagtaacttcatggacgaaaattcaaatg 50246206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 26601353 - 26601424
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| |||| || || ||||||| |||||||||||||| |||||||||||||||||    
T  26601353 aaaagtcaaatgattaatatttgcatgggcatattggaatgattagtaacttcatggacgaaaattcaaatg 26601424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 37677955 - 37677884
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||  | ||||| | ||||| |||||||||||||||||||||||||||||||||||||    
T  37677955 aaaagtcaaatgattaaattttgcagtggcagatcggaaggattagtaacttcagggacgaaaattcaaatg 37677884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 54961708 - 54961779
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| | | ||| ||||||| |||||||||||||||||||||| ||||||||||||    
T  54961708 aaaagtcaaatgattaatatttacgggggcagattgaaaggattagtaacttcagggactaaaattcaaatg 54961779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 33294251 - 33294181
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||| ||||||||||||| ||||||| || |||||||||||||||||||||| |||| |||||||||||    
T  33294251 aaaagttaaatgattaatatttgcaggggcaaattggaaggattagtaacttcatggacaaaaattcaaat 33294181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 13872193 - 13872106
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||| |||||  || |||||||||||||||| ||| |||| || || ||||||||||||| |||||||| ||||||||||||||||    
T  13872193 aaaatctaattaggaccaaaagtcaaatgattagtatttgcaagggcatattggaaggattaataacttcatggacgaaaattcaaat 13872106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 35730943 - 35731009
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||  | || | ||||||||||||||||||||||||||||||||||||||    
T  35730943 tcaaatgattaatatttgcaatgacataatggaaggattagtaacttcagggacgaaaattcaaatg 35731009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 53559494 - 53559440
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcag 84  Q
    |||||||||||||||||||| ||||||| |||||||||||||||| |||||||||    
T  53559494 aaaagtcaaatgattaatatttgcaggggcagattggaaggattaataacttcag 53559440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 48507684 - 48507765
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| || |||||||||||||||||  | ||  | | |||||||||||||||||||||||||| ||||||||||||||||    
T  48507684 aattaagaccaaaagtcaaatgattaaattttgttgtggcagattggaaggattagtaacttcagagacgaaaattcaaatg 48507765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 45199229 - 45199167
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattca 97  Q
    ||||||||||||||| ||||  |||| |||| |||||||||||||||||| ||||||||||||    
T  45199229 tcaaatgattaatatttgcactgtcatattgaaaggattagtaacttcagagacgaaaattca 45199167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 27813330 - 27813401
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||| | |||||  | ||||| | |||||||||||||||||||||||||||| || |||||||||||    
T  27813330 aaaagtcaagtaattaaattttgcagtggcagattggaaggattagtaacttcaggggcggaaattcaaatg 27813401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 52339302 - 52339239
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaa 93  Q
    ||||||||| |||||||||| |||||||  |||||| |||||||||||| ||||||||| ||||    
T  52339302 aaaagtcaagtgattaatatttgcagggaaagattgaaaggattagtaaattcagggaccaaaa 52339239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 8287034 - 8286968
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||  | || | ||||||||||| ||||||||| ||||||||||||||||    
T  8287034 tcaaatgattaatatttgcaatggcaaaatggaaggattattaacttcagagacgaaaattcaaatg 8286968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 19740930 - 19740896
Alignment:
Q  67 aaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||||||||||||||||||    
T  19740930 aaggattagtaacttcagggacgaaaattcaaatg 19740896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 19916938 - 19917004
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||| | ||||||| || ||||||||||||||  |||||||||| |||||    
T  19916938 tcaaatgattaatatttgcagtggcagattgaaatgattagtaacttcaaagacgaaaatttaaatg 19917004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 32846464 - 32846398
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||  | || | ||||||||||| |||||||||| |||||||||||||||    
T  32846464 tcaaatgattaatatttgcaatggcaaaatggaaggattaataacttcaggaacgaaaattcaaatg 32846398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 53475941 - 53475867
Alignment:
Q  27 actaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||| ||||||||||||||| |||| || ||  ||| ||||||||||||||| ||||| ||||| |||||||    
T  53475941 actaaaactcaaatgattaatatttgcaagggcaatttgaaaggattagtaactttagggatgaaaactcaaatg 53475867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 489466 - 489530
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaa 99  Q
    ||||||||||||||| ||||  | || | ||||||||||||||||||| ||||||||||| ||||    
T  489466 tcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttctgggacgaaaatccaaa 489530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 515258 - 515322
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaa 99  Q
    ||||||||||||||| ||||  | || | ||||||||||||||||||| ||||||||||| ||||    
T  515258 tcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttctgggacgaaaatccaaa 515322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 8287056 - 8287087
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  8287056 gattagtaacttcagggacgaaaattcaaatg 8287087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 12691530 - 12691561
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  12691530 gattagtaacttcagggacgaaaattcaaatg 12691561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 34238594 - 34238625
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  34238594 gattagtaacttcagggacgaaaattcaaatg 34238625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 37678108 - 37678077
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  37678108 gattagtaacttcagggacgaaaattcaaatg 37678077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 47862276 - 47862307
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  47862276 gattagtaacttcagggacgaaaattcaaatg 47862307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 48507538 - 48507569
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  48507538 gattagtaacttcagggacgaaaattcaaatg 48507569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 53559511 - 53559542
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  53559511 gattagtaacttcagggacgaaaattcaaatg 53559542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 53477078 - 53477144
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||||| || | ||| ||||||||||| ||||| || ||||| |||||||    
T  53477078 tcaaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagagatgaaaaatcaaatg 53477144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 99
Target Start/End: Complemental strand, 20086697 - 20086668
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaa 99  Q
    ||||||||||||||||||||||||||||||    
T  20086697 gattagtaacttcagggacgaaaattcaaa 20086668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 16367087 - 16366999
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16367087 aaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatg 16366999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 20911237 - 20911166
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20911237 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatg 20911166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 1150044 - 1149973
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  1150044 aaaagtcaaatgattaatatttgcaggggccgattggaaggattagtaacttcagggacgaaaattcaaatg 1149973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 16367240 - 16367311
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  16367240 aaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatg 16367311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 45663785 - 45663855
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  45663785 aaaagtcaaatgattaatatttgcagggccagatttgaaggattagtaacttcagggacgaaaattcaaat 45663855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 1150197 - 1150285
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||||||| ||||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  1150197 aaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaatttcagggacgaaaattcaaatg 1150285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 10446932 - 10446868
Alignment:
Q  37 aaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10446932 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatg 10446868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 19607024 - 19606953
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||  | |||||||||||||||||||||||||||||||||||||||||||    
T  19607024 aaaagtcaaatgattaatatttgcaacgacagattggaaggattagtaacttcagggacgaaaattcaaatg 19606953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 32519432 - 32519503
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||| |||||||||||||||    
T  32519432 aaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaggaacgaaaattcaaatg 32519503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 32519272 - 32519191
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||| ||| |||||||||||||||||||| ||||||  || ||||||||||||||||| ||||||||||||||||||||||    
T  32519272 aattagaaccaaaagtcaaatgattaatatttgcaggagcatattggaaggattagtaatttcagggacgaaaattcaaatg 32519191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 41846500 - 41846428
Alignment:
Q  29 taaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||| ||||| | |||||| ||||||||| ||||||||||||||||||||||||||    
T  41846500 taaaagtcaaatgattaatatttgcagtggcagattagaaggattactaacttcagggacgaaaattcaaatg 41846428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 8089559 - 8089488
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| |||| ||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  8089559 aaaagtcaaatgattgatatttgcaggggcagattggaaggattagtaacttcaaagacgaaaattcaaatg 8089488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 22731809 - 22731880
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||| |||||||||||||||||    
T  22731809 aaaagtcaaatgattaatatttgcagggacagattgaaaggaatagtaacttcacggacgaaaattcaaatg 22731880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 17580435 - 17580365
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||||||||||| ||||||| || ||||||||||||| ||||||| |||||||||||||||||    
T  17580435 aaaagtcaaatgattaatatttgcaggggcaaattggaaggattaataacttcggggacgaaaattcaaat 17580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 22309713 - 22309779
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  22309713 tcaaatgattaatatttgcagtgtcagattggaacaattagtaacttcagggacgaaaattcaaatg 22309779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 20911390 - 20911477
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||||||| ||||||  |||||||||| ||||||||||||||||||| ||||||||||||    
T  20911390 aaaatctaattatgaccaaaagtcaaatgattaatatttgcagga-cagattggaatgattagtaacttcagggacaaaaattcaaatg 20911477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 18477014 - 18476943
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||  | ||||| | |||||||||||||||||||||||||||||| ||||||||||||    
T  18477014 aaaagtcaaatgattaaattttgcagtggcagattggaaggattagtaacttcagggacaaaaattcaaatg 18476943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 22309538 - 22309467
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||| | |||||||||||||||||||||||||  ||| ||||||||||||    
T  22309538 aaaagtcaaatgattaatatgtgcagtggcagattggaaggattagtaacttcattgactaaaattcaaatg 22309467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 41846674 - 41846740
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||| | ||||||||||||| ||||||||||||| |||||||||||||||    
T  41846674 tcaaatgattaatatttgcagtggcagattggaaggagtagtaacttcaggaacgaaaattcaaatg 41846740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 17366899 - 17366964
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaatt 95  Q
    ||||||||| |||||||||| ||||| | ||||||||||||||||||||||| |||||||||||||    
T  17366899 aaaagtcaattgattaatatttgcagtggcagattggaaggattagtaactttagggacgaaaatt 17366964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 4375828 - 4375899
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||  | ||||| | ||||||||||||||||||||||||| ||||||||||| |||||    
T  4375828 aaaagtcaaatgattaaattttgcagtggcagattggaaggattagtaacttcatggacgaaaatttaaatg 4375899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 9693849 - 9693778
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||  | ||||| | |||||||||||||||||||||||||| |||||||||| |||||    
T  9693849 aaaagtcaaatgattaaactttgcagtggcagattggaaggattagtaacttcagtgacgaaaattaaaatg 9693778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 9694024 - 9694090
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||  | || | ||||||||||||||||||||||||||||||||||||||    
T  9694024 tcaaatgattaatatttgcaatgacaaaatggaaggattagtaacttcagggacgaaaattcaaatg 9694090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 8089730 - 8089798
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||   || |||||||||||||||||||||||||||||| ||||| ||||||    
T  8089730 aaaagtcaaatgattaatatttg---gggcagattggaaggattagtaacttcagggacaaaaatgcaaatg 8089798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 17366726 - 17366662
Alignment:
Q  37 aaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||| ||||| | |||||||||||||||| ||| |||||||| |||||||||||||    
T  17366726 aaatgattaatatttgcagtggcagattggaaggattattaaattcagggaagaaaattcaaatg 17366662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 28599687 - 28599775
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||||  | ||||  | ||||||||||||||| |||||||||| ||||||||||||||||    
T  28599687 aaaatctaattaggaccaaaagtcaaatgattaaattttgcaatggcagattggaaggatttgtaacttcagagacgaaaattcaaatg 28599775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 19620786 - 19620857
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||| ||||||||||||||| ||||||| || | ||||||||||||||| |||||||| |||| ||||||||    
T  19620786 aaaattcaaatgattaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaatg 19620857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 5608699 - 5608637
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaa 92  Q
    |||||||||||||||||  | ||||| | || |||||||||||||||||||||||||||||||    
T  5608699 aaaagtcaaatgattaaattttgcagtgccaaattggaaggattagtaacttcagggacgaaa 5608637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 9959107 - 9959173
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| || || | ||||||| ||||||||||||||||| |||| ||||||||||||    
T  9959107 tcaaatgattaatatttgtagtggcagattgaaaggattagtaacttcatggaccaaaattcaaatg 9959173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 28599529 - 28599463
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||  | || | |||||||||||||||||||| |||||||||||||||||    
T  28599529 tcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcatggacgaaaattcaaatg 28599463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 9958932 - 9958861
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||| |||||||||| ||||| | | ||||||||| ||||| |||||||  ||||||||||||||||    
T  9958932 aaaagtcaactgattaatatttgcagtggctgattggaagcattagcaacttcattgacgaaaattcaaatg 9958861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 37985004 - 37985075
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||  | ||||| | || ||||||||||||||||| ||||| |||||||| |||||||    
T  37985004 aaaagtcaaatgattaaattttgcagtggcaaattggaaggattagtaatttcagagacgaaaaatcaaatg 37985075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 43681963 - 43681892
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||  | || | ||||| |||||||||||| | |||||||||||||||||    
T  43681963 aaaagtcaaatgattaatatttgcaatggcaaaatggaatgattagtaactttatggacgaaaattcaaatg 43681892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 17580613 - 17580673
Alignment:
Q  42 attaatatctgcagggtcagattggaaggattagtaacttcagggacg-aaaattcaaatg 101  Q
    |||||||| ||||| | || |||||||||||||||||||| ||||||| ||||||||||||    
T  17580613 attaatatttgcagtggcatattggaaggattagtaactttagggacgaaaaattcaaatg 17580673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 1150061 - 1150092
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  1150061 gattagtaacttcagggacgaaaattcaaatg 1150092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 16367223 - 16367192
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  16367223 gattagtaacttcagggacgaaaattcaaatg 16367192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 101
Target Start/End: Original strand, 17285044 - 17285083
Alignment:
Q  62 attggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  17285044 attggaaggattagtaacttcattgacgaaaattcaaatg 17285083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 17366750 - 17366781
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  17366750 gattagtaacttcagggacgaaaattcaaatg 17366781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 17580452 - 17580483
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  17580452 gattagtaacttcagggacgaaaattcaaatg 17580483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 20911254 - 20911285
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  20911254 gattagtaacttcagggacgaaaattcaaatg 20911285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 32519279 - 32519310
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  32519279 gattagtaacttcagggacgaaaattcaaatg 32519310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 41846652 - 41846621
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  41846652 gattagtaacttcagggacgaaaattcaaatg 41846621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 43236611 - 43236540
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||| ||||||||||||||| |||||||   | |||| ||||||||||| |||||||| |||| ||||||||    
T  43236611 aaaactcaaatgattaatatttgcagggaaggtttgggaggattagtaagttcagggatgaaatttcaaatg 43236540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 100
Target Start/End: Original strand, 4375673 - 4375703
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||||||||||||||||||||||    
T  4375673 gattagtaacttcagggacgaaaattcaaat 4375703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 94
Target Start/End: Complemental strand, 10446959 - 10446929
Alignment:
Q  64 tggaaggattagtaacttcagggacgaaaat 94  Q
    |||||||||||||||||||||||||||||||    
T  10446959 tggaaggattagtaacttcagggacgaaaat 10446929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 11830266 - 11830308
Alignment:
Q  59 cagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||||| || ||| |||||||||||||    
T  11830266 cagattggaaggattagtaactccatggatgaaaattcaaatg 11830308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 13646177 - 13646119
Alignment:
Q  40 tgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaa 98  Q
    |||||||||| ||||||| || ||||| ||||||||||| | ||||||| |||||||||    
T  13646177 tgattaatatttgcaggggcaaattgggaggattagtaagtacagggactaaaattcaa 13646119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 13652096 - 13652154
Alignment:
Q  40 tgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaa 98  Q
    |||||||||| ||||||| || ||||| ||||||||||| | ||||||| |||||||||    
T  13652096 tgattaatatttgcaggggcaaattgggaggattagtaagtacagggactaaaattcaa 13652154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 24607984 - 24607950
Alignment:
Q  67 aaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||| |||||||||||||    
T  24607984 aaggattagtaacttcagggaagaaaattcaaatg 24607950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 100
Target Start/End: Complemental strand, 43682117 - 43682087
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||||||||||||||||||||||    
T  43682117 gattagtaacttcagggacgaaaattcaaat 43682087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 17284816 - 17284779
Alignment:
Q  64 tggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||||  |||||||||||||||    
T  17284816 tggaaggattagtaacttcagatacgaaaattcaaatg 17284779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 18477160 - 18477224
Alignment:
Q  37 aaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||  | || | ||||| |||||||||||||| ||||||||||| |||||    
T  18477160 aaatgattaatatcttcaatggcaaaatggaatgattagtaacttcatggacgaaaatttaaatg 18477224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 64; Significance: 8e-28; HSPs: 3)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 870 - 941
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  870 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatg 941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 710 - 629
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||| ||| |||||||||||||||||||| ||||||| || | ||  ||||||||||| |||||||| ||||| |||||||    
T  710 aattagaaccaaaagtcaaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatg 629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 853 - 822
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  853 gattagtaacttcagggacgaaaattcaaatg 822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 8e-28; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 25287899 - 25287828
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25287899 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatg 25287828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 40525614 - 40525543
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  40525614 aaaagtcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatg 40525543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 41801923 - 41801852
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  41801923 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcaggaacgaaaattcaaatg 41801852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 7670 - 7741
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||    
T  7670 aaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcatggacgaaaattcaaatg 7741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 11478252 - 11478181
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||||||||||||||||    
T  11478252 aaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatg 11478181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 11478422 - 11478493
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  11478422 aaaaatcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaagttcaaatg 11478493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 23424789 - 23424860
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||| ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  23424789 aaaaatcaaatgattaatatttgcaggggcagattggaatgattagtaacttcagggacgaaaattcaaatg 23424860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 27857019 - 27857090
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| |||| || |||||||||| ||||||||||||||||||||||||||||||||    
T  27857019 aaaagtcaaatgattaatatttgcaagggcagattggaatgattagtaacttcagggacgaaaattcaaatg 27857090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 36623459 - 36623388
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||  ||||||| |||||||||||||||||||||||||||||||||||    
T  36623459 aaaagtcaaatgattaatatttgcaggagcagattgaaaggattagtaacttcagggacgaaaattcaaatg 36623388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 41182173 - 41182244
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  41182173 aaaagtcaaatgattaatatttgcaggggcagattgaaatgattagtaacttcagggacgaaaattcaaatg 41182244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 43866988 - 43867059
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||||||||||||||||    
T  43866988 aaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcatggacgaaaattcaaatg 43867059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 29190433 - 29190507
Alignment:
Q  27 actaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||  ||||||||||||    
T  29190433 actaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagagataaaaattcaaatg 29190507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 40525784 - 40525854
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||||||||||| ||||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  40525784 aaaagtcaaatgattaatatttgcaggggcagattggaatgattagtaatttcagggacgaaaattcaaat 40525854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 27856859 - 27856787
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaa 92  Q
    |||||| || |||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||    
T  27856859 aattaagaccaaaagtcaaatgattaatatttgcaggggcggattggaaggattagtaacttcagggacgaaa 27856787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 29190284 - 29190200
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattca 97  Q
    |||||| |||||  || |||||||||||||||||||| |||||||  ||||||||||||||||||||||||| ||||||||||||    
T  29190284 aaaatctaattaggaccaaaagtcaaatgattaatatttgcagggatagattggaaggattagtaacttcagagacgaaaattca 29190200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 547537 - 547466
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||| |||||    
T  547537 aaaagtgaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaatttaaatg 547466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 547712 - 547783
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| || || | ||||||||||||||||||||||| |||||||||||||||||||    
T  547712 aaaagtcaaatgattaatatttgtagtggcagattggaaggattagtaactttagggacgaaaattcaaatg 547783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 20096127 - 20096056
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||| | || ||||||||||||||||||||||||||| ||||||||||||    
T  20096127 aaaagtcaaatgattaatatttgcagaggcaaattggaaggattagtaacttcagggacaaaaattcaaatg 20096056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 36623630 - 36623701
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| || |||||||| |||||||| ||||||||||||||||||||||    
T  36623630 aaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatg 36623701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 37342889 - 37342818
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| | ||||| ||||||||||||||||||| |||||||||||||||    
T  37342889 aaaagtcaaatgattaatatttgcaggggcggattgaaaggattagtaacttcaggaacgaaaattcaaatg 37342818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 37343059 - 37343130
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| || |||||||| |||||||| ||||||||||||||||||||||    
T  37343059 aaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatg 37343130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 38619905 - 38619834
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||  | ||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  38619905 aaaagtcaaatgattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatg 38619834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 43866818 - 43866747
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| || |||||||| |||||||| ||||||||||||||||||||||    
T  43866818 aaaagtcaaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatg 43866747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 40422442 - 40422508
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||| | |||||| ||||||||||||||||||||||||||||||||||||    
T  40422442 tcaaatgattaatatttgcagtggcagatttgaaggattagtaacttcagggacgaaaattcaaatg 40422508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 31690173 - 31690241
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaa 98  Q
    |||||| ||||||||||||| ||||| | |||||||||| |||||||||||||||||||||||||||||    
T  31690173 aaaagttaaatgattaatatttgcagtggcagattggaatgattagtaacttcagggacgaaaattcaa 31690241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 41251230 - 41251162
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaa 98  Q
    |||||||||||||||||||| || |||| || ||||||||||||||||||||||| |||||||||||||    
T  41251230 aaaagtcaaatgattaatatttgtagggacatattggaaggattagtaacttcagagacgaaaattcaa 41251162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 22763873 - 22763944
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| | ||  | |||||||||||||||||||||||||| ||||||||||||||||    
T  22763873 aaaagtcaaatgattaatatttacaatgacagattggaaggattagtaacttcagagacgaaaattcaaatg 22763944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 23424619 - 23424548
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| |||||||  || |||||||||||||||||| ||||||||||||    
T  23424619 aaaagtcaaatgattaatatttgcaggggcagattgttagaattagtaacttcagggacaaaaattcaaatg 23424548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 26739820 - 26739753
Alignment:
Q  34 gtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||| ||||||| || |||| |||||||||||| ||||||||||||||||||||||    
T  26739820 gtcaaatgattaatatttgcagggacatattgaaaggattagtaatttcagggacgaaaattcaaatg 26739753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 40422267 - 40422200
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattca 97  Q
    |||||||||||||||||||| ||||| | |||||||||||||||||| ||||||| ||||||||||||    
T  40422267 aaaagtcaaatgattaatatttgcagtggcagattggaaggattagttacttcagagacgaaaattca 40422200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 26739984 - 26740066
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggt-cagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||| ||| |||||||||||||||||||| || ||||  ||||||| ||||||||||||||||| |||||||||||||||||    
T  26739984 aattagaaccaaaagtcaaatgattaatatttgtagggggcagattgcaaggattagtaacttcatggacgaaaattcaaatg 26740066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 20096298 - 20096372
Alignment:
Q  30 aaaagtcaaatgattaa---tatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||| ||||||||||||   ||| |||| || |||||||||||||||||||||||||||||||||||||||||||    
T  20096298 aaaattcaaatgattaaatatatttgcatgggcagattggaaggattagtaacttcagggacgaaaattcaaatg 20096372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 7500 - 7429
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| || |||| ||  ||||||| ||||||||||||||||| |||||||||||||    
T  7500 aaaagtcaaatgattaatatttgtagggacatgttggaagaattagtaacttcagggaagaaaattcaaatg 7429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 41251403 - 41251474
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| |||||||  |||||| || |||||||||||||| ||||| |||||||||||    
T  41251403 aaaagtcaaatgattaatatttgcaggggtagattgaaatgattagtaacttcatggacggaaattcaaatg 41251474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 9632430 - 9632364
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||  | || | ||||||||||||||||||||||||||||||||||||||    
T  9632430 tcaaatgattaatatttgcaatgacaaaatggaaggattagtaacttcagggacgaaaattcaaatg 9632364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 35163604 - 35163533
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||  | ||||| | ||||||| |||||| |||||||||| |||||||||||||||||    
T  35163604 aaaagtcaaatgattaaattttgcagtggcagattgaaaggatcagtaacttcaaggacgaaaattcaaatg 35163533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 22763697 - 22763631
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| || || |  ||||| ||| ||||||||||||||||||||||||||||||||    
T  22763697 tcaaatgattaatatttgtagtggtagattagaaagattagtaacttcagggacgaaaattcaaatg 22763631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 31689997 - 31689931
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||| || ||||| | || |||||||||||| ||||||||| |||||||||||||||||    
T  31689997 tcaaatgattaacatttgcagtggcatattggaaggattggtaacttcatggacgaaaattcaaatg 31689931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 25288059 - 25288140
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||| ||| |||||||||||||||||||| ||||||| || | ||  ||||||||||| |||||||| ||||| |||||||    
T  25288059 aattagaaccaaaagtcaaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatg 25288140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 101
Target Start/End: Original strand, 9632612 - 9632651
Alignment:
Q  62 attggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  9632612 attggaaggattagtaacttcaaggacgaaaattcaaatg 9632651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 41802097 - 41802160
Alignment:
Q  34 gtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattca 97  Q
    |||||||||| ||||| ||||||| || ||||||| |||||||||||||| ||| |||||||||    
T  41802097 gtcaaatgataaatatttgcaggggcaaattggaatgattagtaacttcaaggatgaaaattca 41802160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 4970227 - 4970161
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||| ||||||| ||||||| || | ||||||||||||||| |||||||| |||| ||||||||    
T  4970227 tcaaatgcttaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaatg 4970161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 24529946 - 24530004
Alignment:
Q  43 ttaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||| ||||| | ||||| ||||||||||||||||||||  |||||||||||||||    
T  24529946 ttaatatttgcagtggcagataggaaggattagtaacttcagtaacgaaaattcaaatg 24530004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 101
Target Start/End: Original strand, 15716189 - 15716224
Alignment:
Q  66 gaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||||||||||||| |||||    
T  15716189 gaaggattagtaacttcagggacgaaaatttaaatg 15716224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 23424636 - 23424667
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  23424636 gattagtaacttcagggacgaaaattcaaatg 23424667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 24529780 - 24529729
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcaggg 86  Q
    ||||||||||||||| ||||  | || |||||||||||||||||||||||||    
T  24529780 tcaaatgattaatatttgcactggcacattggaaggattagtaacttcaggg 24529729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 25287916 - 25287947
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  25287916 gattagtaacttcagggacgaaaattcaaatg 25287947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 31690019 - 31690050
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  31690019 gattagtaacttcagggacgaaaattcaaatg 31690050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 38600227 - 38600298
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||| ||||||||||||  | ||||| | | | ||| |||||||||||||||||||||||||| ||||||||    
T  38600227 aaaactcaaatgattaaattttgcagtggctgtttgaaaggattagtaacttcagggacgaaatttcaaatg 38600298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 40422420 - 40422389
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  40422420 gattagtaacttcagggacgaaaattcaaatg 40422389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 40525631 - 40525662
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  40525631 gattagtaacttcagggacgaaaattcaaatg 40525662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 7393143 - 7393209
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| |||||||  | | ||| ||||||||||| |||||||| ||||| |||||||    
T  7393143 tcaaatgattaatatttgcagggataaaatgggaggattagtaagttcagggatgaaaaatcaaatg 7393209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 100
Target Start/End: Original strand, 22763719 - 22763749
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||||||||||||||||||||||    
T  22763719 gattagtaacttcagggacgaaaattcaaat 22763749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 36574924 - 36574851
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagatt-ggaaggattagtaacttcagggacgaaaattcaaatgcc 103  Q
    |||| ||||||||||||||| |||||||  ||||| || ||||||||||| |||||||| |||| ||||||||||    
T  36574924 aaaactcaaatgattaatatttgcaggga-agatttgggaggattagtaagttcagggatgaaatttcaaatgcc 36574851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 37713798 - 37713732
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||  |  |||||| ||| |||| |||||||| |||||||||||||||||    
T  37713798 tcaaatgattaatatttgcaatggtagattgaaagaattaataacttcatggacgaaaattcaaatg 37713732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 38599066 - 38599000
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||||| || | ||  ||||||||||| |||||||| ||||| |||||||    
T  38599066 tcaaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatg 38599000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 99
Target Start/End: Complemental strand, 27436630 - 27436601
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaa 99  Q
    ||||||||||||||||||||||||||||||    
T  27436630 gattagtaacttcagggacgaaaattcaaa 27436601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 99
Target Start/End: Original strand, 27437552 - 27437581
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaa 99  Q
    ||||||||||||||||||||||||||||||    
T  27437552 gattagtaacttcagggacgaaaattcaaa 27437581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 101
Target Start/End: Original strand, 41182023 - 41182051
Alignment:
Q  73 tagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||||||||||||    
T  41182023 tagtaacttcagggacgaaaattcaaatg 41182051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 8e-28; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 43938171 - 43938242
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  43938171 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatg 43938242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 26825754 - 26825666
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||| || |||||||||||||||||| | ||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  26825754 aaaatctaattaagaccaaaagtcaaatgattaatctttgcaggggcagattggaatgattagtaacttcagggacgaaaattcaaatg 26825666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 43938018 - 43937930
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  43938018 aaaatctaattatgaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatg 43937930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 12931015 - 12931086
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||    
T  12931015 aaaagtcaaatgattaatatttgcatgggcagattggaaggattagtaacttcagggacgaaaattcaaatg 12931086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 34454747 - 34454828
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||| ||| |||||||||||||||||||| ||||||| ||||||| ||| |||||||||||||||||||||||||||||||    
T  34454747 aattagaaccaaaagtcaaatgattaatatttgcaggggcagattgaaagaattagtaacttcagggacgaaaattcaaatg 34454828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 37563478 - 37563390
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||    
T  37563478 aaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattagaaggattagtaaattcagggacgaaaattcaaatg 37563390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 37563631 - 37563702
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||| ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  37563631 aaaagtcaaaagattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatg 37563702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 26825897 - 26825978
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||| ||| |||||||||||||||||||| ||||||| ||||||| |||||||| |||||||| |||||||||||||||||    
T  26825897 aattataaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattaataacttcatggacgaaaattcaaatg 26825978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 12929531 - 12929602
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| |||| || |||||||||||||||||| |||||||||||| |||||||||||    
T  12929531 aaaagtcaaatgattaatatttgcacgggcagattggaaggattagtcacttcagggacggaaattcaaatg 12929602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 34454591 - 34454520
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| |||||||  ||||||||||||||||||||||||  ||||||||||||||||    
T  34454591 aaaagtcaaatgattaatatttgcaggggtagattggaaggattagtaacttcaaagacgaaaattcaaatg 34454520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 20947295 - 20947229
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| || || | ||||||||||||||||||||||||| |||||||||||||||||    
T  20947295 tcaaatgattaatatttgtagtggcagattggaaggattagtaacttcatggacgaaaattcaaatg 20947229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 12928306 - 12928387
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||| ||| ||||||||||||||| |||| ||||| | ||||||  ||||||||||||||||| |||||||||||||||||    
T  12928306 aattagaaccaaaagtcaaatgattgatatttgcagcggcagattaaaaggattagtaacttcaaggacgaaaattcaaatg 12928387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 12928139 - 12928076
Alignment:
Q  34 gtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaa 98  Q
    |||||||||||||||| |||| || ||||||||||||||||||||||| ||||||||||||||||    
T  12928139 gtcaaatgattaatatatgcatgg-cagattggaaggattagtaactttagggacgaaaattcaa 12928076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 12930879 - 12930808
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| || | ||||||||||||||| |||||||| ||||| |||||||    
T  12930879 aaaagtcaaatgattaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaatg 12930808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 35262733 - 35262662
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||  | ||||| | |||||||||||||||||||||||||| ||| ||||||||||||    
T  35262733 aaaagtcaaatgattaaattttgcagtggcagattggaaggattagtaacttcagagacaaaaattcaaatg 35262662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 5280553 - 5280619
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||  | ||||||  |||||||||||||||||||||||||||||||||||    
T  5280553 tcaaatgattaatatttgcaatgacagattcaaaggattagtaacttcagggacgaaaattcaaatg 5280619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 5636306 - 5636372
Alignment:
Q  34 gtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    ||||||| |||||  | ||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  5636306 gtcaaataattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaat 5636372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 15827838 - 15827757
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||| |||||||||||| ||||||| ||||| | ||||||| |||||||| ||||||||   |||||||||||||||    
T  15827838 aattaaaaccaaaagtcaaatggttaatatttgcagtggcagattgaaaggattaataacttcaaaaacgaaaattcaaatg 15827757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 7159206 - 7159276
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||| ||||||||||||||| |||||||| | || ||| ||||||||||||||||| |||||||||||||||    
T  7159206 aaaattcaaatgattaatatttgcagggtaaaatggga-ggattagtaacttcaggaacgaaaattcaaatg 7159276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 27558129 - 27558200
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||  | || | |||||||||||||||||||  |||||||||||||||||    
T  27558129 aaaagtcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcgtggacgaaaattcaaatg 27558200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 5280374 - 5280308
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||||| | ||| | ||||||||||||||||||||||||||  |||||||||||||||    
T  5280374 tcaaattattaatatttacagtggcagattggaaggattagtaacttcagtaacgaaaattcaaatg 5280308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 12929394 - 12929324
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||||||||||| ||||||| || | ||| ||||||||||| |||||||| ||||| ||||||    
T  12929394 aaaagtcaaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaat 12929324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 47081964 - 47081883
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| || |||| ||||||||||||||| | ||  | ||||||| |||||||||||||||||| || |||||||||||||    
T  47081964 aattaagaccaaaaatcaaatgattaatatttacaatggcagattgaaaggattagtaacttcagagatgaaaattcaaatg 47081883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 25049437 - 25049509
Alignment:
Q  29 taaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||  | ||||| | || ||||||| ||||||||||||||||||  ||||||||||||    
T  25049437 taaaagtcaaatgattaaattttgcagtggcatattggaaagattagtaacttcagggagaaaaattcaaatg 25049509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 101
Target Start/End: Original strand, 44545908 - 44545943
Alignment:
Q  66 gaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||||||    
T  44545908 gaaggattagtaacttcagggacgaaaattcaaatg 44545943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 47121555 - 47121626
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||  | ||||| |  |||||| ||| |||||||||||||| ||||||||||||||||    
T  47121555 aaaagtcaaatgattaaattttgcagtggtagattgaaagtattagtaacttcagagacgaaaattcaaatg 47121626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 5636127 - 5636062
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||  | || || ||||||||||||||||| |||||||||||||||||||    
T  5636127 tcaaatgattaatatttgcaatggcaaat-ggaaggattagtaactttagggacgaaaattcaaatg 5636062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 20947471 - 20947541
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||| ||||||||||||| | ||| |  ||||||||||||||||||||||||  || ||||||||||||    
T  20947471 aaaagttaaatgattaatatttacagtggtagattggaaggattagtaacttcatagatgaaaattcaaat 20947541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 23191131 - 23191200
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||||||||||| ||||| | ||||||||||| |||||||| ||||  ||||| |||||||||    
T  23191131 aaaagtcaaatgattaatatttgcagtggcagattggaagaattagtaaattca-tgacgataattcaaat 23191200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 70 - 103
Target Start/End: Complemental strand, 37563614 - 37563581
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatgcc 103  Q
    ||||||||||||||||||||||||||||||||||    
T  37563614 gattagtaacttcagggacgaaaattcaaatgcc 37563581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 15827981 - 15827950
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  15827981 gattagtaacttcagggacgaaaattcaaatg 15827950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 26825890 - 26825859
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  26825890 gattagtaacttcagggacgaaaattcaaatg 26825859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 34454740 - 34454709
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  34454740 gattagtaacttcagggacgaaaattcaaatg 34454709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 43938154 - 43938123
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  43938154 gattagtaacttcagggacgaaaattcaaatg 43938123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 101
Target Start/End: Original strand, 5636150 - 5636180
Alignment:
Q  71 attagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||||||||||||||    
T  5636150 attagtaacttcagggacgaaaattcaaatg 5636180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 7158333 - 7158267
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| | ||||| || | ||||||||||||||| |||| ||| ||||| |||||||    
T  7158333 tcaaatgattaatatttacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaatg 7158267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 27557950 - 27557884
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||  | || | |||||| |||| |||||||| |||||||||||||||||    
T  27557950 tcaaatgattaatatttgcaatggcaaaatggaagaattattaacttcaaggacgaaaattcaaatg 27557884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 47739000 - 47739058
Alignment:
Q  40 tgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaa 98  Q
    |||||||||| ||||||| || ||||| ||||||||||| | ||||||| |||||||||    
T  47739000 tgattaatatttgcaggggcaaattgggaggattagtaaatacagggactaaaattcaa 47739058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 8e-28; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 13480315 - 13480244
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13480315 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatg 13480244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 13480468 - 13480556
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||    
T  13480468 aaaatctaattaggaccaaaagtcaaatgattaatatttgtaggggcagattggaaggattagtaacttcagggacgaaaattcaaatg 13480556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 5064612 - 5064683
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  5064612 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacctcagggacgaaaattcaaatg 5064683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 20994968 - 20995039
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  20994968 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatg 20995039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 23291851 - 23291780
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  23291851 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatg 23291780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 23292021 - 23292092
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  23292021 aaaagtcaaatgattaatatttgcagggatagattggaaggattagtaacttcagggacgaaaattcaaatg 23292092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 32337671 - 32337600
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  32337671 aaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatg 32337600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 30234869 - 30234938
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaa 99  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  30234869 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaa 30234938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 5064459 - 5064371
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||||    
T  5064459 aaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcaaattgggaggattagtaacttcagggacgaaaattcaaatg 5064371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 22494140 - 22494228
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||| |||||||  || ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  22494140 aaaacccaattaggaccaaaagtcaaatgattgatatttgcaggggcagattggaaggattagtaacttcaaggacgaaaattcaaatg 22494228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 32337827 - 32337915
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||||||| ||||||| || ||||||||||| ||||||||||||||||||||||||||||    
T  32337827 aaaatctaattaggacgaaaagtcaaatgattaatatttgcaggggcatattggaaggatcagtaacttcagggacgaaaattcaaatg 32337915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 21880471 - 21880400
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  21880471 aaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcagagacgaaaattcaaatg 21880400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 21880641 - 21880711
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||| ||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||    
T  21880641 aaaagtcaaatgcttaatatttgcagggatagattggaaggattagtaacttcagggacgaaaattcaaat 21880711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 15819750 - 15819838
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||| ||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||    
T  15819750 aaaatctaattaggaccaaaagtcaaatgattagtatttgcaagggtagattggaaggattagtaacttcagggacgaaaattcaaatg 15819838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 737974 - 738045
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||  || |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  737974 aaaagtcaaatgattaatacttgaaggggcagattggaaggattagtaacttcatggacgaaaattcaaatg 738045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 9607593 - 9607664
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| || ||| |||||||||||||||||| |||||||||||||||||    
T  9607593 aaaagtcaaatgattaatatttgcaggggcatattagaaggattagtaacttcatggacgaaaattcaaatg 9607664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 20561204 - 20561275
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| |||||||||||||||| |||| ||| |||||||||||||||||    
T  20561204 aaaagtcaaatgattaatatttgcaggggcagattggaaggattaataacatcaaggacgaaaattcaaatg 20561275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 22493987 - 22493917
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| |||||||| |||||| || ||||||||||||||||||||||||||||||||    
T  22493987 aaaagtcaaatgattaatatttgcagggt-agattgaaaagattagtaacttcagggacgaaaattcaaatg 22493917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 20561035 - 20560964
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| ||||||| || ||||| ||||| ||||||||||||||||||||    
T  20561035 aaaagtcaaatgattaatatttgcaggggcagattgaaatgattaataactacagggacgaaaattcaaatg 20560964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 20994925 - 20994855
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| ||||||||||||| ||||||| |||||| ||||||||||||||||||| ||||||||||||||||    
T  20994925 aaaagttaaatgattaatatttgcaggg-cagattagaaggattagtaacttcagagacgaaaattcaaatg 20994855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 26503631 - 26503702
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||| | | |||||||||||||| |||||||| |||||||||||||||||    
T  26503631 aaaagtcaaatgattaatatttgcagtggcggattggaaggattaataacttcatggacgaaaattcaaatg 26503702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 3299841 - 3299907
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||  | ||||||||||||||||||||||||| |||||||||||||||||    
T  3299841 tcaaatgattaatatttgcaatggcagattggaaggattagtaacttcaaggacgaaaattcaaatg 3299907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 3299666 - 3299595
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| ||||||||||||| ||||  | || ||||||| |||||||||||||| |||||||||||||||||    
T  3299666 aaaagtgaaatgattaatatttgcaatggcaaattggaatgattagtaacttcatggacgaaaattcaaatg 3299595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 101
Target Start/End: Complemental strand, 15819643 - 15819604
Alignment:
Q  62 attggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15819643 attggaaggattagtaacttcagggacgaaaattcaaatg 15819604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 26542719 - 26542652
Alignment:
Q  35 tcaaatgattaa-tatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||| ||| ||||| | ||||||| || ||||||||||||||||||||||||||||||||    
T  26542719 tcaaatgattaaatatttgcagtggcagattgaaatgattagtaacttcagggacgaaaattcaaatg 26542652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 7612826 - 7612896
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||||||||  | ||||| | |||||||||| |||| |||| |||||||||||||||||||||    
T  7612826 aaaagtcaaatgattaaattttgcagtggcagattggaaagattggtaatttcagggacgaaaattcaaat 7612896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 16704615 - 16704657
Alignment:
Q  59 cagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  16704615 cagattggaaggattagtaacttcaaggacgaaaattcaaatg 16704657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 20774341 - 20774429
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||||  | ||||| | ||||||| ||| |||||||||||||| ||||||||| ||||||    
T  20774341 aaaatctaattatgaccaaaagtcaaatgattaaattttgcagtggcagattgaaagaattagtaacttcagagacgaaaatacaaatg 20774429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 8427307 - 8427236
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||| |||| |||||||||| ||||||| || | ||| |||||||||||||| || ||||||||||||||||    
T  8427307 aaaattcaactgattaatatttgcaggggcaaaatgggaggattagtaacttgagagacgaaaattcaaatg 8427236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 1066421 - 1066487
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||  | || | |||||  |||||||||||||||||||||||||||||||    
T  1066421 tcaaatgattaatatttgcaatggcaaaatggaaatattagtaacttcagggacgaaaattcaaatg 1066487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 7612650 - 7612584
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||  | || | || ||| |||||||||||||||||||||||||||||||    
T  7612650 tcaaatgattaatatttgcaatgacaaaatgaaagaattagtaacttcagggacgaaaattcaaatg 7612584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 16706957 - 16706999
Alignment:
Q  59 cagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  16706957 cagattggaatgattagtaacttcaaggacgaaaattcaaatg 16706999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 19296509 - 19296575
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||| |  ||||||| |  ||||||||||||||| |||||||||||||||    
T  19296509 tcaaatgattaatatttgcagtggtagattggcaaaattagtaacttcaggaacgaaaattcaaatg 19296575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 3586316 - 3586247
Alignment:
Q  32 aagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||  | ||||| | |||||| |||||||||| ||||| || ||||||||||||||||    
T  3586316 aagtcaaatgattaaattttgcagtggcagatttgaaggattagcaactttagagacgaaaattcaaatg 3586247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 26542880 - 26542968
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||||||| ||| | | | ||||| ||  |||||||||||||| |||||||| |||||||    
T  26542880 aaaatctaattaggaccaaaagtcaaatgattaatatttgcggtggccgattgaaattattagtaacttcagagacgaaaactcaaatg 26542968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 21880624 - 21880593
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  21880624 gattagtaacttcagggacgaaaattcaaatg 21880593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 23291868 - 23291899
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  23291868 gattagtaacttcagggacgaaaattcaaatg 23291899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 26503488 - 26503519
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  26503488 gattagtaacttcagggacgaaaattcaaatg 26503519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 26542741 - 26542772
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  26542741 gattagtaacttcagggacgaaaattcaaatg 26542772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 31879735 - 31879806
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||  | |||||   ||||||||||  ||||||||||||||||| | |||||||||||    
T  31879735 aaaagtcaaatgattaaattttgcagtaacagattggaattattagtaacttcagggatgcaaattcaaatg 31879806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 101
Target Start/End: Complemental strand, 5064594 - 5064564
Alignment:
Q  71 attagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||||||||||||||    
T  5064594 attagtaacttcagggacgaaaattcaaatg 5064564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 101
Target Start/End: Original strand, 13480333 - 13480363
Alignment:
Q  71 attagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||||||||||||||    
T  13480333 attagtaacttcagggacgaaaattcaaatg 13480363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 20774191 - 20774125
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||  | || | || |||||||| |||||||| |||||||||||||||||    
T  20774191 tcaaatgattaatatttgcaatgacaaaatgaaaggattaataacttcaaggacgaaaattcaaatg 20774125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 100
Target Start/End: Original strand, 22494004 - 22494034
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||||||||||||||||||||||    
T  22494004 gattagtaacttcagggacgaaaattcaaat 22494034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 31879559 - 31879493
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||||| ||||  | || | ||||| ||||||||||||| ||||||||||||||||||    
T  31879559 tcaaattattaatatttgcaatggcaaaatggaaagattagtaacttcggggacgaaaattcaaatg 31879493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 17784385 - 17784449
Alignment:
Q  37 aaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||| ||||||| || | ||| ||||||||||| |||| ||| ||||| |||||||    
T  17784385 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcatggatgaaaaatcaaatg 17784449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 18865216 - 18865156
Alignment:
Q  41 gattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||| ||||| | ||  ||||||||||||||||||| |  ||||||||||||||||    
T  18865216 gattaatatttgcagtggcaatttggaaggattagtaactttatagacgaaaattcaaatg 18865156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 8e-28; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 32052501 - 32052572
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32052501 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatg 32052572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 33735590 - 33735661
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33735590 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatg 33735661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 14745555 - 14745484
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  14745555 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatg 14745484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 25253193 - 25253122
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  25253193 aaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatg 25253122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 25316983 - 25316912
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  25316983 aaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatg 25316912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 32052331 - 32052260
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  32052331 aaaagtcaaatgattaatatttgcaggggcggattggaaggattagtaacttcagggacgaaaattcaaatg 32052260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 37945101 - 37945030
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  37945101 aaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatg 37945030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 18013729 - 18013648
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||| |||||||||||||||||||| ||||||| || ||||||||||||||||||||||  ||||||||||||||||    
T  18013729 aattaaaaccaaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcactgacgaaaattcaaatg 18013648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 33735430 - 33735349
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||| ||| |||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||| |||||||    
T  33735430 aattagaaccaaaagtcaaatgattaatatttgcagggacagattggaaggattagtaatttcagggacgaaaaatcaaatg 33735349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 13064669 - 13064757
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||||||    
T  13064669 aaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaactttagagacgaaaattcaaatg 13064757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 25253346 - 25253434
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||| ||| |||| || |||||||||||||||||||||||||||||||||||||||||||    
T  25253346 aaaatctaattaggaccaaaagtcaaatgattagtatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatg 25253434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 25317137 - 25317225
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||| ||| |||| || |||||||||||||||||||||||||||||||||||||||||||    
T  25317137 aaaatctaattaggaccaaaagtcaaatgattagtatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatg 25317225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 12991065 - 12991136
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| |||||||  ||||||||||||||||||||||||| ||||||||||||||||    
T  12991065 aaaagtcaaatgattaatatttgcaggggtagattggaaggattagtaacttcagagacgaaaattcaaatg 12991136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 14745590 - 14745661
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| |||| || |||||||||||||||||||||||||| ||||||||||||||||    
T  14745590 aaaagtcaaatgattaatatttgcaagggcagattggaaggattagtaacttcagcgacgaaaattcaaatg 14745661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 7015791 - 7015855
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaa 99  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||    
T  7015791 tcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaa 7015855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 37945271 - 37945339
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaa 98  Q
    |||||||||||||||||||| |||| || ||||||| ||||||||||||||||||||||||||||||||    
T  37945271 aaaagtcaaatgattaatatttgcaagggcagattgaaaggattagtaacttcagggacgaaaattcaa 37945339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 6421899 - 6421970
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| || |||| |||||||||||| ||||||||||||||||||||||    
T  6421899 aaaagtcaaatgattaatatttgcaggggcatattgaaaggattagtaatttcagggacgaaaattcaaatg 6421970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 27753585 - 27753517
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaa 98  Q
    |||||||||||||||||||| ||||| | ||| ||||||||||||||||||||| ||||||||||||||    
T  27753585 aaaagtcaaatgattaatatttgcagtggcagtttggaaggattagtaacttcatggacgaaaattcaa 27753517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 7015615 - 7015544
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||| | |||||||||| |||||||||||||| ||| |||||||||||||    
T  7015615 aaaagtcaaatgattaatatttgcagtggcagattggaatgattagtaacttcatggatgaaaattcaaatg 7015544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 35 - 100
Target Start/End: Original strand, 27753761 - 27753826
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    ||||||||||||||| ||||| | ||||||||||||||||||||||||||  ||||||||||||||    
T  27753761 tcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagaaacgaaaattcaaat 27753826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 20704973 - 20705060
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||||||| ||||||| ||||||| || ||||||||||||||  ||||||||||||||||    
T  20704973 aaaatctaattaggaccaaaagtcaaatgattaatatttgcaggg-cagattgaaaagattagtaacttcaaagacgaaaattcaaatg 20705060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 6421729 - 6421658
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| || |||| ||||||| || |||||||||||||| |||| ||||||||||||    
T  6421729 aaaagtcaaatgattaatatttgtaggggcagattgaaaagattagtaacttcaaggacaaaaattcaaatg 6421658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 21260967 - 21260901
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||  | || | ||||||||||||||||||||||||||||||||||||||    
T  21260967 tcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggacgaaaattcaaatg 21260901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 22024152 - 22024218
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||| | || |||||||||||||||||||| || ||||||||||||||||    
T  22024152 tcaaatgattaatatttgcagtggcaaattggaaggattagtaacttaagtgacgaaaattcaaatg 22024218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 18013879 - 18013959
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||| ||||||||||| |||||||| ||||| | ||||||| ||||||| ||||||||| ||||||||||| |||||    
T  18013879 aattaaaaccaaaagtcaaataattaatatttgcagaggcagattgaaaggattggtaacttca-ggacgaaaatttaaatg 18013959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 41339461 - 41339390
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||| ||  | ||||| | |||||||||| |||||| |||||||||||||||||||||||||    
T  41339461 aaaagtcaaatgataaaattttgcagtggcagattggaaagattagcaacttcagggacgaaaattcaaatg 41339390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 8323158 - 8323092
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||| ||  | || | |||||||||||||||||||| |||||||||||||||||    
T  8323158 tcaaatgattaatatcttcaatggcaaaatggaaggattagtaacttcatggacgaaaattcaaatg 8323092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 14744723 - 14744794
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||| ||||||||||||||| ||||||| || | ||| ||||||||||| |||||||| ||||| |||||||    
T  14744723 aaaattcaaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 14744794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 22533497 - 22533426
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| ||||||||||  | || || | |||||||||| ||||| ||||||||||||||||||||||||||    
T  22533497 aaaagttaaatgattaaattttgtagtggcagattggaatgattaataacttcagggacgaaaattcaaatg 22533426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 8323333 - 8323403
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||||||||||| ||||  | || | || ||| ||||||||||||| ||||||||||||||||    
T  8323333 aaaagtcaaatgattaatatttgcaatggcaaaatgaaagaattagtaacttcaaggacgaaaattcaaat 8323403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 18934981 - 18935055
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaat 94  Q
    ||||| ||| |||||||||||||||||  | ||||| | || ||| ||||||||||||| |||||||||||||||    
T  18934981 aattataaccaaaagtcaaatgattaaattttgcagtggcaaattagaaggattagtaatttcagggacgaaaat 18935055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 34404585 - 34404520
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||  | || || |||||||||||||||||||| ||||||||||||||||    
T  34404585 tcaaatgattaatatttgcaatgccaaat-ggaaggattagtaacttcagtgacgaaaattcaaatg 34404520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 101
Target Start/End: Complemental strand, 16118030 - 16117997
Alignment:
Q  68 aggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||||    
T  16118030 aggattagtaacttcagggacgaaaattcaaatg 16117997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 6421882 - 6421851
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  6421882 gattagtaacttcagggacgaaaattcaaatg 6421851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 18013736 - 18013767
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  18013736 gattagtaacttcagggacgaaaattcaaatg 18013767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 20704844 - 20704773
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| |||| ||  | |||  |||||||||||| ||||||||  ||||||||||||    
T  20704844 aaaagtcaaatgattaatatttgcaaggataaattaaaaggattagtaatttcagggataaaaattcaaatg 20704773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 22533650 - 22533619
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  22533650 gattagtaacttcagggacgaaaattcaaatg 22533619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 101
Target Start/End: Original strand, 22533703 - 22533738
Alignment:
Q  66 gaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||| ||||||||||||||||||    
T  22533703 gaaggattagtaacttcggggacgaaaattcaaatg 22533738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 32052484 - 32052453
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  32052484 gattagtaacttcagggacgaaaattcaaatg 32052453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 33735573 - 33735542
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  33735573 gattagtaacttcagggacgaaaattcaaatg 33735542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 18934783 - 18934749
Alignment:
Q  67 aaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||| |||||||||||||||||    
T  18934783 aaggattagtaacttcatggacgaaaattcaaatg 18934749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 100
Target Start/End: Original strand, 12628340 - 12628369
Alignment:
Q  71 attagtaacttcagggacgaaaattcaaat 100  Q
    ||||||||||||||||||||||||||||||    
T  12628340 attagtaacttcagggacgaaaattcaaat 12628369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 39402141 - 39402210
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaa 99  Q
    |||| ||||||||||||||| ||||||| || | ||| ||||||||||| | |||||| ||||| |||||    
T  39402141 aaaactcaaatgattaatatttgcaggggcaaaatgggaggattagtaagtccagggatgaaaaatcaaa 39402210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 147382 - 147454
Alignment:
Q  29 taaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||| ||||||||||||||| |  | ||  ||||||||| ||||||||| ||||||||| |||||| |||||    
T  147382 taaaaatcaaatgattaatatttttatgggtagattggaatgattagtaatttcagggacaaaaatttaaatg 147454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 101
Target Start/End: Complemental strand, 41339611 - 41339583
Alignment:
Q  73 tagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||||||||||||    
T  41339611 tagtaacttcagggacgaaaattcaaatg 41339583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 8e-28; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 10998150 - 10998221
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10998150 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatg 10998221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 1741494 - 1741423
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||    
T  1741494 aaaagtcaaatgattaatatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatg 1741423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 10749425 - 10749354
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| |||||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  10749425 aaaagtcaaatgattaatatttgcagggatagattagaaggattagtaacttcagggacgaaaattcaaatg 10749354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 30804125 - 30804196
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| |||||||||||||||    
T  30804125 aaaagtcaaatgattaatatttgcagtgacagattggaaggattagtaacttcaggaacgaaaattcaaatg 30804196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 22129113 - 22129043
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||||||||| |||||||||||||||    
T  22129113 aaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagtgacgaaaattcaaat 22129043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 40256981 - 40256911
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||||||||||| |||| || || |||||||||||||||||||||||||||||||||||||||    
T  40256981 aaaagtcaaatgattaatatttgcaagggcatattggaaggattagtaacttcagggacgaaaattcaaat 40256911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 11312859 - 11312771
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||||||| ||||||| |||| || ||||||| |||||||||||||||||||||||||||    
T  11312859 aaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcagactgcaaggattggtaacttcagggacgaaaattcaaatg 11312771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 55036929 - 55037017
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||| ||||||||||||||| ||||||| ||||||||||||||||||||||||| | |||||||||||||||    
T  55036929 aaaatctaattaggaccaaaaatcaaatgattaatatttgcaggggcagattggaaggattagtaacttcaagaacgaaaattcaaatg 55037017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 33458195 - 33458266
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||| | |||||| ||||||||||||||||||||||||| ||||||||||    
T  33458195 aaaagtcaaatgattaatatttgcagtgacagattagaaggattagtaacttcagggacgacaattcaaatg 33458266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 40257150 - 40257220
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||||||||||| ||||||| ||||||| || ||||||||| |||||||||||||||||||||    
T  40257150 aaaagtcaaatgattaatatttgcaggggcagattgaaatgattagtaatttcagggacgaaaattcaaat 40257220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 51279341 - 51279268
Alignment:
Q  27 actaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    ||||||||||||||||||||||| ||||||| || |||| || ||||||||||||| |||||||||||||||||    
T  51279341 actaaaagtcaaatgattaatatttgcaggggcaaattgaaatgattagtaacttctgggacgaaaattcaaat 51279268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 10749656 - 10749744
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||| |||||||  || |||||||||||||||||||| ||| | | |||||||||| |||||||||||||||||||||||||| |||||    
T  10749656 aaaacccaattatgaccaaaagtcaaatgattaatatttgctgaggcagattggaaagattagtaacttcagggacgaaaatttaaatg 10749744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 55036769 - 55036705
Alignment:
Q  37 aaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||| | |||||||||||||    
T  55036769 aaatgattaatatttgcaggggcagattggaaggattagtaacttcaggaatgaaaattcaaatg 55036705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 10749579 - 10749650
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcag 84  Q
    ||||||||||||  || |||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  10749579 aaaatccaattaggaccaaaagtcaaatgattaatatttgctggggcagattggaaggattagtaacttcag 10749650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 22129286 - 22129357
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||| |||||||| ||||| | || ||| ||||||||||||||||||||||||||||||||||||    
T  22129286 aaaagtcaaattattaatatttgcagaggcaaatttgaaggattagtaacttcagggacgaaaattcaaatg 22129357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 33989296 - 33989367
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||| || | || ||||||||||||| |||||||| |||||||||||||||||    
T  33989296 aaaagtcaaatgattaatatctgtagtgacaaattggaaggattactaacttcatggacgaaaattcaaatg 33989367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 53037130 - 53037063
Alignment:
Q  34 gtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||| |||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||    
T  53037130 gtcaaatgactaatatttgcaggggtatattggaaggattagtaacttcagggacgaaaattcaaatg 53037063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 53037304 - 53037375
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| ||||||| |||||| |||||||  |||||||||||||||||||    
T  53037304 aaaagtcaaatgattaatatttgcaggggcagattgaaaggatcagtaactgtagggacgaaaattcaaatg 53037375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 21300410 - 21300480
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||||||||||| | ||||| |||| || |||||||||||||||||| |||||||||||||||    
T  21300410 aaaagtcaaatgattaatatttacagggacagactgaaaggattagtaacttcagagacgaaaattcaaat 21300480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 10997981 - 10997913
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| | |||||    ||||||||||||||||||||||||||||||||||||||||    
T  10997981 aaaagtcaaatgattaatatttacaggga---attggaaggattagtaacttcagggacgaaaattcaaatg 10997913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 11313012 - 11313082
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||| ||| ||||||| |||||| ||||||||||||||||||  ||||||||||||||||    
T  11313012 aaaagtcaaatgattagtatttgcaggggcagattagaaggattagtaacttca-tgacgaaaattcaaatg 11313082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 30803948 - 30803882
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||| |||||||||| ||||| | ||||||||||| |||||||||||||| ||||||||||||||||    
T  30803948 tcaattgattaatatttgcagtgacagattggaagaattagtaacttcagagacgaaaattcaaatg 30803882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 33989116 - 33989052
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaa 99  Q
    |||||| |||||||| ||||| | ||||||||||||||||||||||| ||| |||||||||||||    
T  33989116 tcaaataattaatatttgcagtggcagattggaaggattagtaacttaaggtacgaaaattcaaa 33989052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 30890484 - 30890555
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||  | ||||| | ||||||| || |||||||||||||||||| |||||||||||||    
T  30890484 aaaagtcaaatgattaaattttgcagtggcagattgaaaagattagtaacttcagggatgaaaattcaaatg 30890555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 35432627 - 35432697
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    ||||||||||| |||||||| ||||| | |||||||||||||||| |||||| | | ||||||||||||||    
T  35432627 aaaagtcaaataattaatatttgcagtggcagattggaaggattaataactttatgaacgaaaattcaaat 35432697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 46670355 - 46670284
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||  | ||||| |  ||||||||||||||||||| |||| ||||| |||||||||||    
T  46670355 aaaagtcaaatgattaaattttgcagtggtagattggaaggattagtaaattcaaggacggaaattcaaatg 46670284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 30654762 - 30654827
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||| | |||||| ||||||| ||||||||||  ||||||||||||||||    
T  30654762 tcaaatgattaatat-tgcagtggcagattagaaggatcagtaacttcatagacgaaaattcaaatg 30654827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 28310465 - 28310384
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||| ||| |||||||||||||||||  | ||||| |  | | |||||||||||||||||| ||||||| |||||||||||    
T  28310465 aattagaaccaaaagtcaaatgattaaattttgcagtggaaaactggaaggattagtaactttagggacggaaattcaaatg 28310384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 24576572 - 24576640
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaa 98  Q
    |||| ||||||||||||||| ||||  | |||||||||||||||||||| ||||  || ||||||||||    
T  24576572 aaaattcaaatgattaatatttgcactggcagattggaaggattagtaatttcaaagatgaaaattcaa 24576640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 46670539 - 46670603
Alignment:
Q  37 aaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||| ||||  | || | |||||| ||||||||||||||||| |||||||||||||    
T  46670539 aaatgattaatatttgcaatgacaaaatggaagaattagtaacttcagggatgaaaattcaaatg 46670603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 11312995 - 11312964
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  11312995 gattagtaacttcagggacgaaaattcaaatg 11312964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 22129130 - 22129161
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  22129130 gattagtaacttcagggacgaaaattcaaatg 22129161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 30890331 - 30890362
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  30890331 gattagtaacttcagggacgaaaattcaaatg 30890362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 51279490 - 51279459
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  51279490 gattagtaacttcagggacgaaaattcaaatg 51279459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 53037151 - 53037182
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  53037151 gattagtaacttcagggacgaaaattcaaatg 53037182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 55036793 - 55036824
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  55036793 gattagtaacttcagggacgaaaattcaaatg 55036824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 24576366 - 24576324
Alignment:
Q  59 cagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| ||||||||||||| |||| |||||||||||||||||    
T  24576366 cagattagaaggattagtaatttcatggacgaaaattcaaatg 24576324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 33458018 - 33457952
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||| | || |||  |||||||||||||||||| | | ||||||||||||    
T  33458018 tcaaatgattaatatttgcagtgacatattaaaaggattagtaacttcagaggcaaaaattcaaatg 33457952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 30654591 - 30654522
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaa 99  Q
    ||||||||||| |||||||| | |||   ||||||||||  ||||||||||||| |||||||| ||||||    
T  30654591 aaaagtcaaattattaatatttacagtagcagattggaaatattagtaacttcaaggacgaaatttcaaa 30654522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 37152812 - 37152886
Alignment:
Q  27 actaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  37152812 actaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatg 37152886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 1047464 - 1047552
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  1047464 aaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatg 1047552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 1040405 - 1040334
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  1040405 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaattcaaatg 1040334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 1047311 - 1047240
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  1047311 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaattcaaatg 1047240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 2953741 - 2953812
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2953741 aaaaatcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatg 2953812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 26953225 - 26953138
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||| |||||  || |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  26953225 aaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcagggacgaaaattcaaat 26953138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 29043032 - 29043103
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  29043032 aaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcagggacgaaaattcaaatg 29043103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 49002983 - 49002912
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  49002983 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcatggacgaaaattcaaatg 49002912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 5926636 - 5926555
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| || |||||||||||||||||| | ||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  5926636 aattaagaccaaaagtcaaatgattaatgtttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatg 5926555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 2953588 - 2953500
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||||||| ||||||| ||||||| ||||||||||||||| |||||||||||||||||||    
T  2953588 aaaatctaattatgaccaaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaactttagggacgaaaattcaaatg 2953500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 5183630 - 5183542
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||||||| ||||||| ||||||||||||||||||||||| | |||||||||||||||||    
T  5183630 aaaatctaattaggaccaaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaactttatggacgaaaattcaaatg 5183542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 739326 - 739255
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||    
T  739326 aaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcaaggacgaaaattcaaatg 739255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 5183783 - 5183854
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| || |||||||||||| |||||||||||||||||||||||||||    
T  5183783 aaaagtcaaatgattaatatttgcaggggcaaattggaaggattcgtaacttcagggacgaaaattcaaatg 5183854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 19755682 - 19755753
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||  ||||||||||||    
T  19755682 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggataaaaattcaaatg 19755753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 25414951 - 25414880
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||| || |||||||||||||    
T  25414951 aaaagtcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagagaagaaaattcaaatg 25414880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 33347693 - 33347764
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||||||| |||||||||||||||||    
T  33347693 aaaagtcaaatgattaatatttgcaagggcagattggaaggattagtaacttcaaggacgaaaattcaaatg 33347764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 46849935 - 46850006
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| || ||||||||||| ||||||||||||||||||||||||||||    
T  46849935 aaaagtcaaatgattaatatttgcaggggcaaattggaaggatcagtaacttcagggacgaaaattcaaatg 46850006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 739495 - 739566
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| | |||||||||||||||    
T  739495 aaaagtcaaatgattaatatttgcagggacagattgaaaggattagtaacttcatgtacgaaaattcaaatg 739566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 12577289 - 12577360
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||| |||||    
T  12577289 aaaagtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaatttaaatg 12577360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 29980746 - 29980675
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| |||||||||| |||||||||||||| || ||||||||||||||    
T  29980746 aaaagtcaaatgattaatatttgcaggggcagattggaaagattagtaacttcatgggcgaaaattcaaatg 29980675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 29980915 - 29980986
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||| ||||||||||||||| ||||||| || ||||||||||||||||||||| ||||||||||||||||||    
T  29980915 aaaaatcaaatgattaatatttgcaggggcaaattggaaggattagtaacttccgggacgaaaattcaaatg 29980986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 33347523 - 33347452
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| || |||| ||||||||||| |||||||||||||||||||||| ||||||||    
T  33347523 aaaagtcaaatgattaatatttgtaggggcagattggaagaattagtaacttcagggacgaaagttcaaatg 33347452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 37152645 - 37152574
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||| ||| |||| || ||||||||||||||||||||||||| |||||||||||||||||    
T  37152645 aaaagtcaaatgattagtatttgcacgggcagattggaaggattagtaacttcatggacgaaaattcaaatg 37152574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 49003152 - 49003223
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||| ||||||||||||||| ||||| | ||||||||||||||||||||||||| |||||||||||||||||    
T  49003152 aaaaatcaaatgattaatatttgcagaggcagattggaaggattagtaacttcatggacgaaaattcaaatg 49003223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 33030602 - 33030683
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||| ||| |||||||||||||||||||| ||||| | ||||||| |||||||||||| |||| |||||||||||||||||    
T  33030602 aattagaaccaaaagtcaaatgattaatatttgcagtggcagattgaaaggattagtaatttcatggacgaaaattcaaatg 33030683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 5926798 - 5926869
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||| ||| ||||| | ||||||||| ||||||||||||||||||| |||||||||||||    
T  5926798 aaaagtcaaatgattactatttgcagaggcagattggacggattagtaacttcagggatgaaaattcaaatg 5926869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 6056483 - 6056412
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| || ||||||||||| ||||| || |||||||||||||||||||    
T  6056483 aaaagtcaaatgattaatatttgcagggacatattggaaggatcagtaattttagggacgaaaattcaaatg 6056412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 12577117 - 12577046
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| ||||||| || ||||||||||||||  ||||||||||||||||    
T  12577117 aaaagtcaaatgattaatatttgcaggggcagattgaaatgattagtaacttcatagacgaaaattcaaatg 12577046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 24701377 - 24701306
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| ||||||||||  | ||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  24701377 aaaagttaaatgattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatg 24701306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 25415121 - 25415192
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||| ||||||| ||||||  || |||||||||||||||||||||||| |||||||||||||||    
T  25415121 aaaagtcaaatggttaatatttgcaggaacatattggaaggattagtaacttcaggaacgaaaattcaaatg 25415192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 37152540 - 37152469
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||| ||| |||| || || |||||||||||||||||||||| |||||||||||||||||    
T  37152540 aaaagtcaaatgattagtatttgcaagggcatattggaaggattagtaacttcatggacgaaaattcaaatg 37152469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 46364681 - 46364610
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| || |||| ||||| | || ||||||||||||||||||||||||||||||||    
T  46364681 aaaagtcaaatgattaatatttgtagggacagatggaaaagattagtaacttcagggacgaaaattcaaatg 46364610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 33030436 - 33030370
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||| |||| ||||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  33030436 tcaaatgattcatatttgcagtggcagattggaagaattagtaacttcagggacgaaaattcaaatg 33030370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 46364852 - 46364922
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||||||||||| ||||||| || |||| |||||||||||| |||| ||||||||||||||||    
T  46364852 aaaagtcaaatgattaatatttgcaggggcatattgaaaggattagtaatttcaaggacgaaaattcaaat 46364922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 6056659 - 6056727
Alignment:
Q  34 gtcaaatgattaatatctgcagggtcagattggaaggattagtaactt-cagggacgaaaattcaaatg 101  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||||| |||||| |||||||||||||    
T  6056659 gtcaaatgattaatatttgcaggggcagattgaaaggattagtaacttacagggatgaaaattcaaatg 6056727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 26953378 - 26953449
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| |||| |  ||||||||||| ||||||||||||||| | |||||||||||||    
T  26953378 aaaagtcaaatgattaatatttgcaagagcagattggaagaattagtaacttcaggaatgaaaattcaaatg 26953449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 29042862 - 29042791
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||| ||||||| | |||||||| |||||||    
T  29042862 aaaaatcaaatgattaatatttgcagggacagattggaaggattaataacttccgcgacgaaaaatcaaatg 29042791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 46849765 - 46849694
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||| |||||| | ||||| ||||||| ||| |||| ||||||||||||||||||||||||||    
T  46849765 aaaagtcaaatgactaatatttacaggggcagattgaaagaattaataacttcagggacgaaaattcaaatg 46849694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 48380960 - 48381031
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||| | |||||||||||||||| |||||| | ||||||||||| |||||    
T  48380960 aaaagtcaaatgattaatatttgcagcggcagattggaaggattaataactttaaggacgaaaatttaaatg 48381031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 49990056 - 49990143
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||| |||||| || |||||||||||||||||||| || ||||  ||||| ||||||||| ||||||||  |||||||||||||||    
T  49990056 aaaatctaattaagaccaaaagtcaaatgattaatatttgtaggggtagatttgaaggattaataacttcaaagacgaaaattcaaat 49990143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 46545013 - 46545079
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||| | || | ||||||||||||||||||||||||||||| ||||||||    
T  46545013 tcaaatgattaatatttgcagtggcaaaatggaaggattagtaacttcagggacgaaacttcaaatg 46545079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 48380783 - 48380717
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||| | ||||  | |||||||||||||||||||||||||| ||||||||||||||||    
T  48380783 tcaaatgattaatttttgcactggcagattggaaggattagtaacttcagcgacgaaaattcaaatg 48380717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 8890335 - 8890248
Alignment:
Q  13 aaaatccaattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||  || |||||||||||||||||||| || || | |||||||||| ||||||||||||||||||| || |||||||||    
T  8890335 aaaatctaattacgaccaaaagtcaaatgattaatatttggagtggcagattggaaagattagtaacttcagggac-aatattcaaatg 8890248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 10019655 - 10019721
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||  | || | |||||||||||||||||||||||| |||||||||||||    
T  10019655 tcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggatgaaaattcaaatg 10019721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 35312080 - 35312010
Alignment:
Q  31 aaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||  | ||||  | |||||||||| ||||||||||||||| ||||||||||||||||    
T  35312080 aaagtcaaatgattaaattttgcaatgacagattggaatgattagtaacttcagtgacgaaaattcaaatg 35312010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 24701580 - 24701617
Alignment:
Q  64 tggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24701580 tggaaggattagtaacttcagggacgaaaattcaaatg 24701617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 6334763 - 6334692
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||| |||||||||||||| ||||| | ||||| ||||||||||||||||| |   |||||||||||||||    
T  6334763 aaaagccaaatgattaatatttgcagtggcagatcggaaggattagtaactttaacaacgaaaattcaaatg 6334692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 30830237 - 30830166
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||| ||||||||||||  | ||| | | |||||||||| ||||| ||||||||||||||||||||||||||    
T  30830237 aaaattcaaatgattaaattttgcggtggcagattggaatgattattaacttcagggacgaaaattcaaatg 30830166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 49989902 - 49989839
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaa 93  Q
    |||||||||||||||||||| ||||| | ||||||| |||||||| |||||||| | |||||||    
T  49989902 aaaagtcaaatgattaatatttgcagaggcagattgaaaggattaataacttcaagaacgaaaa 49989839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 8890491 - 8890557
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||| | || ||||||| ||||||| |||||| ||||||| |||||||||    
T  8890491 tcaaatgattaatatttgcagtgacatattggaatgattagtcacttcatggacgaatattcaaatg 8890557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 100
Target Start/End: Original strand, 35312258 - 35312323
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    ||||||||||||||| ||||  | || | ||||||||||||||||| || ||||||||||||||||    
T  35312258 tcaaatgattaatatttgcaatgacaaaatggaaggattagtaactccaaggacgaaaattcaaat 35312323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 100
Target Start/End: Original strand, 52455037 - 52455102
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    ||||||||||||||  ||||| | |||||||||||||||| |||||| | ||||||||||| ||||    
T  52455037 tcaaatgattaatagttgcagtggcagattggaaggattaataactttatggacgaaaatttaaat 52455102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 6345637 - 6345701
Alignment:
Q  37 aaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||| ||||||| ||||||| || | ||||||||||||||| |||||||| |||| ||||||||    
T  6345637 aaatgcttaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaatg 6345701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 1040422 - 1040453
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  1040422 gattagtaacttcagggacgaaaattcaaatg 1040453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 1047328 - 1047359
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  1047328 gattagtaacttcagggacgaaaattcaaatg 1047359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 6056500 - 6056531
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  6056500 gattagtaacttcagggacgaaaattcaaatg 6056531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 12577272 - 12577241
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  12577272 gattagtaacttcagggacgaaaattcaaatg 12577241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 19755665 - 19755634
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  19755665 gattagtaacttcagggacgaaaattcaaatg 19755634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 46364835 - 46364804
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  46364835 gattagtaacttcagggacgaaaattcaaatg 46364804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Complemental strand, 46849918 - 46849887
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  46849918 gattagtaacttcagggacgaaaattcaaatg 46849887  T

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Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 101
Target Start/End: Complemental strand, 33347673 - 33347645
Alignment:
Q  73 tagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||||||||||||    
T  33347673 tagtaacttcagggacgaaaattcaaatg 33347645  T

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Target: scaffold0206 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 10432 - 10361
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  10432 aaaagtcaaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatg 10361  T

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Target: scaffold0233 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 8535 - 8469
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  8535 tcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatg 8469  T

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Target: scaffold0233; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 8709 - 8780
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||| | || ||||||||||||| |||||||  ||| | |||||||||||    
T  8709 aaaagtcaaatgattaatatttgcagtgacaaattggaaggattaataacttcgcggatggaaattcaaatg 8780  T

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Target: scaffold0201 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 14170 - 14241
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||||||||| || |||||||||||||    
T  14170 aaaagtcaaatgattaatatttgtaggggcagattggaaggattagtaacttcagtgatgaaaattcaaatg 14241  T

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Target: scaffold0201; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 14000 - 13930
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaat 100  Q
    |||||||||||||||||||| |||||||  || |||||||||||||||| || || |||||||||||||||    
T  14000 aaaagtcaaatgattaatatttgcaggggtaggttggaaggattagtaatttgagtgacgaaaattcaaat 13930  T

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Target: scaffold0321 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 10769 - 10698
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||||| || |||| |||||||| ||| ||||||||||||||||||||||    
T  10769 aaaagtcaaatgattaatatttgcaggggcatattgaaaggattaataatttcagggacgaaaattcaaatg 10698  T

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Target: scaffold0321; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 10939 - 11010
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| || |||| | ||||| || |||||||||||||| |||||||||||||||||    
T  10939 aaaagtcaaatgattaatatttgtaggggcggattgaaaagattagtaacttcatggacgaaaattcaaatg 11010  T

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Target: scaffold0321; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 10786 - 10817
Alignment:
Q  70 gattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||||||||||||||||||||    
T  10786 gattagtaacttcagggacgaaaattcaaatg 10817  T

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Target: scaffold0202 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 14511 - 14582
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| ||||||||||||| | ||| | |||||| |||||||||||||||||| |||||||||||||||||    
T  14511 aaaagttaaatgattaatatttacagtggcagatttgaaggattagtaacttcaaggacgaaaattcaaatg 14582  T

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Target: scaffold0202; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 14337 - 14271
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| |||||||| ||||| | || |||||||||||||||||| ||| |||||||||||||||||    
T  14337 tcaaattattaatatttgcagtggcaaattggaaggattagtaacctcaaggacgaaaattcaaatg 14271  T

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Target: scaffold0279 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 10960 - 10889
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||||||||||||||||| ||||  | || | |||||||||||||||||||  |||||||||||||||||    
T  10960 aaaagtcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcgtggacgaaaattcaaatg 10889  T

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Target: scaffold0279; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 11139 - 11205
Alignment:
Q  35 tcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||||| ||||  | || | |||||| |||| |||||||| |||||||||||||||||    
T  11139 tcaaatgattaatatttgcaatggcaaaatggaagaattattaacttcaaggacgaaaattcaaatg 11205  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 261108 - 261037
Alignment:
Q  30 aaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||| ||||||||||||||| ||||||| || | ||| ||||||||||| |||| ||| ||||| |||||||    
T  261108 aaaattcaaatgattaatatttgcaggggcaaaatgggaggattagtaaattcatggatgaaaaatcaaatg 261037  T

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Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 262441 - 262505
Alignment:
Q  37 aaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    ||||||||||||| |||||||  | | ||| ||||||||||| |||||||| ||||| |||||||    
T  262441 aaatgattaatatttgcaggggaaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 262505  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 120467 - 120546
Alignment:
Q  20 aattaaaactaaaagtcaaatgattaatatctgcagggtcagattggaaggattagtaacttcagggacgaaaattcaaatg 101  Q
    |||||| || |||||||||||||||||||| || || | || | ||||||||||| ||||||  |||||||||||| |||||    
T  120467 aattaagaccaaaagtcaaatgattaatatttgtagtgacaaaatggaaggattaataactt--gggacgaaaattgaaatg 120546  T

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