View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13585_low_8 (Length: 457)
Name: NF13585_low_8
Description: NF13585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13585_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 402; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 19 - 440
Target Start/End: Complemental strand, 24877663 - 24877242
Alignment:
| Q |
19 |
aaaatcgaatattgaatataggaacaaatgatcacaaggatgaaaaattgttaaaaaatgagattcggacagagtttttcagatgcagtaaaaatgataa |
118 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24877663 |
aaaatcgaatattgaatataggaacaaatgatcaaaaggatgaaaaattgttaaaaaatgagattcggacagagtttttcagatgcagtaaaaatgataa |
24877564 |
T |
|
| Q |
119 |
ttaataataatagggaatcttcttgacaatttcatatgtaccaacaattgtttataagtaaaaatattaagcttatcaaaatattggtatgtaatcactc |
218 |
Q |
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|| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24877563 |
tttataataatacggaatcttcttgacaatttcatacgtaccaacaattgtttataagtaaaaatattaagcttatcaaaatattggtatgtaatcactc |
24877464 |
T |
|
| Q |
219 |
ataataatattgaatattagaaactaataataatattcgatttttaatacgtaccaataattgtttctggggcttgagtatttcctctgcgctgaaactc |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24877463 |
ataataatattgaatattagaaactaataataatattcgatttttaatacgtaccaataattgtttctggggcttgagtatttcctctgcgctgaaactc |
24877364 |
T |
|
| Q |
319 |
gttgtgtgtttctaaccgtcttctggttcttctactgttagtatgatgttcatctcgaccatcggtgggcatttttagctgtatgaacaaacaaagaaat |
418 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
24877363 |
gttgtgtgtttctaaccgtcttctggttcttctactgttagtatgatgttcatctcgaccatcggtgggcattttttgctgtatgaacaaacaaagaaat |
24877264 |
T |
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| Q |
419 |
ttgcagctatttatctactttg |
440 |
Q |
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|||||||||||||||||||||| |
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| T |
24877263 |
ttgcagctatttatctactttg |
24877242 |
T |
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