View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13588_high_13 (Length: 326)
Name: NF13588_high_13
Description: NF13588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13588_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 11 - 305
Target Start/End: Original strand, 49009666 - 49009960
Alignment:
| Q |
11 |
caaaggaggccaacaaataaggttgattcaaataaccaaaaacatttttaaagatgaacaaatttgattcaaaatgcttccaataaatagagtcattttg |
110 |
Q |
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| T |
49009666 |
caaaggaggccaacaaataaggttgattcaaataaccaaaaacatttttaaagatgaacaaatttgattcaaaatgcttccaataaatagagtcattttg |
49009765 |
T |
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| Q |
111 |
agtagaattaggaaggatatggtcgtgcattttctaggctatgttcggagacttttgagcaattaaattgtggatgtgaaatttaccattgcaaatgaaa |
210 |
Q |
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| T |
49009766 |
agtagaattaggaaggatatggtcgtgcattttctaggctatgttcggagacttttgagcaattaaattgtggatgtgaaatttaccattgcaaatgaaa |
49009865 |
T |
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| Q |
211 |
tccaaaacaacaacatggatattgacaagtaggttaatagcattgccattaatcttagagagccatcaattgattgtcttcagagaaatatgatg |
305 |
Q |
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| T |
49009866 |
tccaaaacaacaacatggatattgacaagtaggttaatagcattgccattaatcttagagagccatcaattaattgtcttcagagaaatatgatg |
49009960 |
T |
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