View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1358_high_36 (Length: 449)
Name: NF1358_high_36
Description: NF1358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1358_high_36 |
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Alignment Details
Target: chr8 (Bit Score: 392; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 30 - 437
Target Start/End: Original strand, 11382538 - 11382945
Alignment:
| Q |
30 |
cttagttatattgtttatccaaacagtactagggtcagttactataaatcatatatcatatctacatcaaattattgaccataattttggacttgtgggg |
129 |
Q |
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| T |
11382538 |
cttagttatattgtttatccaaacagtactagggtcagttactataaatcatatatcatatctacatcaaattattgaccataattttggactcgtgggg |
11382637 |
T |
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| Q |
130 |
tctacctagaatggtacttatcagaagctgctcccataacaagattttgtatgttatatctagagatgagttctataatccctttttcaatgcaatccat |
229 |
Q |
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| T |
11382638 |
tctacctagaatggtacttatcagaagctgctcccataacaagattttgtatgttatatctagagatgagttctataatccctttttcaatgcaatccat |
11382737 |
T |
|
| Q |
230 |
ttcaatgtgcaatttagttgctgtcacctgtataagaaaataaattattcaaataagttttgaaatgaatgctgcaaagcaatcacatggaaatagttat |
329 |
Q |
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| T |
11382738 |
ttcaatgtgcaatttagttgctgtcacctgtataagaaaataaattattcaaataagttttgaaatgaatgctgcaaagcaatcacatggaaatagttat |
11382837 |
T |
|
| Q |
330 |
aagttataacaaaaaataacagtacgttacccccatcctttgacagatagctagataaacatcaagagtcttctgcatgttttgactttcaatttccctg |
429 |
Q |
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| T |
11382838 |
aagttataacaaacaataacagtacattacccccatcctttgacagatagctagataaacatcaacagtcttctgcatgttttgactttcaatttccctg |
11382937 |
T |
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| Q |
430 |
tatgcctt |
437 |
Q |
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| T |
11382938 |
tatgcctt |
11382945 |
T |
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